hg19_v2_chr10_-_90712520_90712536	1.34893	CACAGUG	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr1_+_203274639_203274664	1.33294	CACAGUG	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr5_+_162864575_162864620	1.33026	CACAGUG	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr12_+_20522179_20522203	1.06005	CACAGUG	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr5_+_76506706_76506787	1.057	CACAGUG	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr16_-_70719925_70719989	1.00928	CACAGUG	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr2_-_20212422_20212455	0.948107	CACAGUG	ENST00000421259.2|MATN3|ENSG00000132031.8|matrilin 3 	ENST00000407540.3|MATN3|ENSG00000132031.8|matrilin 3
hg19_v2_chr5_+_172068232_172068320	0.886654	CACAGUG	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr4_+_174089904_174089921	0.841495	CACAGUG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr11_+_58939965_58939965	0.824415	CACAGUG	ENST00000227451.3|DTX4|ENSG00000110042.3|deltex homolog 4 (Drosophila)
hg19_v2_chr5_-_57756087_57756087	0.800247	CACAGUG	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr14_-_100070363_100070467	0.736555	CACAGUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr15_-_37390482_37390572	0.7169	CACAGUG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr5_-_111754948_111755013	0.715499	CACAGUG	ENST00000261486.5|EPB41L4A|ENSG00000129595.8|erythrocyte membrane protein band 4.1 like 4A
hg19_v2_chr1_+_65613217_65613331	0.710258	CACAGUG	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr12_-_88974236_88974256	0.697847	CACAGUG	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr3_-_178790057_178790072	0.690698	CACAGUG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr3_+_23986748_23986761	0.661826	CACAGUG	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr10_+_104474207_104474297	0.634133	CACAGUG	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr6_+_80341000_80341025	0.626631	CACAGUG	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr20_-_7921090_7921121	0.626575	CACAGUG	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr20_-_62610982_62611008	0.624361	CACAGUG	ENST00000369886.3|SAMD10|ENSG00000130590.9|sterile alpha motif domain containing 10 	ENST00000450107.1|SAMD10|ENSG00000130590.9|sterile alpha motif domain containing 10
hg19_v2_chr9_+_116638562_116638606	0.623744	CACAGUG	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr4_-_139163491_139163510	0.616333	CACAGUG	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr14_-_92413727_92413743	0.615824	CACAGUG	ENST00000267620.10|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr8_-_91658303_91658327	0.604296	CACAGUG	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr7_+_24612935_24612980	0.600399	CACAGUG	ENST00000222644.5|MPP6|ENSG00000105926.11|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
hg19_v2_chr4_+_5053162_5053184	0.59971	CACAGUG	ENST00000282908.5|STK32B|ENSG00000152953.8|serine/threonine kinase 32B
hg19_v2_chr3_+_178866199_178866311	0.580243	CACAGUG	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr3_+_37903432_37903475	0.579606	CACAGUG	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr15_+_52311398_52311461	0.570261	CACAGUG	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr3_+_15247686_15247784	0.566424	CACAGUG	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr1_-_108507631_108507809	0.564555	CACAGUG	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr6_+_117996621_117996665	0.546248	CACAGUG	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr10_-_124768300_124768334	0.542375	CACAGUG	ENST00000368886.5|IKZF5|ENSG00000095574.7|IKAROS family zinc finger 5 (Pegasus)
hg19_v2_chr15_+_96873921_96873946	0.539808	CACAGUG	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr10_+_112679301_112679346	0.538132	CACAGUG	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr15_+_76352178_76352306	0.531312	CACAGUG	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chrX_+_117629766_117629872	0.52356	CACAGUG	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr11_+_34642656_34642682	0.523029	CACAGUG	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr2_+_43864387_43864472	0.51731	CACAGUG	ENST00000282406.4|PLEKHH2|ENSG00000152527.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
hg19_v2_chr19_+_32896697_32896786	0.511421	CACAGUG	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr10_-_81205373_81205429	0.507685	CACAGUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr6_+_41514078_41514164	0.507449	CACAGUG	ENST00000373063.3|FOXP4|ENSG00000137166.10|forkhead box P4 	ENST00000373060.1|FOXP4|ENSG00000137166.10|forkhead box P4
hg19_v2_chr1_-_184723942_184724047	0.50616	CACAGUG	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr17_-_63052929_63052962	0.499199	CACAGUG	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr10_+_22610124_22610188	0.492621	CACAGUG	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr4_-_53525406_53525502	0.491543	CACAGUG	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr4_+_144257915_144258009	0.490882	CACAGUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_-_51763661_51763672	0.48864	CACAGUG	ENST00000530004.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr1_+_61547894_61547980	0.483216	CACAGUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr10_+_89419370_89419643	0.482799	CACAGUG	ENST00000361175.4|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2 	ENST00000456849.1|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
hg19_v2_chr6_+_35995488_35995528	0.477139	CACAGUG	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chr6_+_111195973_111195994	0.47687	CACAGUG	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr17_+_25799008_25799036	0.469907	CACAGUG	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chrX_-_3631635_3631698	0.459454	CACAGUG	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chrX_+_72783026_72783049	0.453629	CACAGUG	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr11_+_14665263_14665274	0.448594	CACAGUG	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr15_+_29131103_29131186	0.443959	CACAGUG	ENST00000558402.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2 	ENST00000558330.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2
hg19_v2_chr2_-_227664474_227664508	0.441545	CACAGUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr5_-_93447333_93447386	0.441084	CACAGUG	ENST00000395965.3|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000505869.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000509163.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A
hg19_v2_chr17_+_8924837_8924872	0.434003	CACAGUG	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr5_-_59995921_59996000	0.424492	CACAGUG	ENST00000453022.2|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000545085.1|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000265036.5|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B
hg19_v2_chr7_+_77325738_77325789	0.419949	CACAGUG	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr9_+_116917807_116917840	0.418777	CACAGUG	ENST00000356083.3|COL27A1|ENSG00000196739.10|collagen, type XXVII, alpha 1
hg19_v2_chr13_-_76056250_76056280	0.414036	CACAGUG	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr10_+_98592009_98592061	0.411302	CACAGUG	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr5_+_65018017_65018088	0.408498	CACAGUG	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr16_+_67063036_67063088	0.408177	CACAGUG	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr14_-_30396948_30396998	0.407382	CACAGUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr18_-_72921303_72921339	0.403713	CACAGUG	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr7_-_30066233_30066332	0.40352	CACAGUG	ENST00000222803.5|FKBP14|ENSG00000106080.6|FK506 binding protein 14, 22 kDa
hg19_v2_chr17_+_55333876_55333939	0.402208	CACAGUG	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr2_-_191399426_191399475	0.402047	CACAGUG	ENST00000409150.3|TMEM194B|ENSG00000189362.7|transmembrane protein 194B
hg19_v2_chr21_-_43346790_43346823	0.398579	CACAGUG	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr14_+_56585048_56585150	0.397902	CACAGUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr17_+_15848231_15848231	0.395237	CACAGUG	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr12_-_31744031_31744059	0.391331	CACAGUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr2_+_158114051_158114110	0.391071	CACAGUG	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr1_+_145438469_145438501	0.389082	CACAGUG	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr1_+_229406847_229406935	0.387446	CACAGUG	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr13_+_113622810_113622830	0.383391	CACAGUG	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr15_+_98503922_98503964	0.378698	CACAGUG	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr12_+_79258547_79258607	0.37719	CACAGUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr7_-_92219698_92219713	0.376575	CACAGUG	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr13_-_67804445_67804475	0.373818	CACAGUG	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr19_+_41222998_41223057	0.37286	CACAGUG	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr14_+_57735614_57735629	0.365198	CACAGUG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr7_+_94285637_94285689	0.362901	CACAGUG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr9_-_26947453_26947473	0.361206	CACAGUG	ENST00000397292.3|PLAA|ENSG00000137055.10|phospholipase A2-activating protein
hg19_v2_chr3_-_182698381_182698431	0.359593	CACAGUG	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr6_+_127439749_127439829	0.359089	CACAGUG	ENST00000356698.4|RSPO3|ENSG00000146374.9|R-spondin 3
hg19_v2_chr4_-_140477928_140477990	0.355842	CACAGUG	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr17_+_38278530_38278605	0.353992	CACAGUG	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr1_+_221051699_221051699	0.352796	CACAGUG	ENST00000366903.6|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chrX_+_64708615_64708615	0.352612	CACAGUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr6_-_166075557_166075588	0.34875	CACAGUG	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr17_+_28705921_28706000	0.347804	CACAGUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr17_-_3749515_3749551	0.347234	CACAGUG	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr14_-_90085458_90085557	0.344341	CACAGUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr11_-_18656028_18656040	0.341755	CACAGUG	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr15_+_81071684_81071719	0.341637	CACAGUG	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr1_+_101361626_101361698	0.338097	CACAGUG	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr14_-_53619816_53620056	0.3367	CACAGUG	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr3_+_141205852_141205929	0.336492	CACAGUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr2_-_64881018_64881064	0.336451	CACAGUG	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr4_+_85504075_85504132	0.330144	CACAGUG	ENST00000295887.5|CDS1|ENSG00000163624.5|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
hg19_v2_chr10_+_60094735_60094749	0.330125	CACAGUG	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr1_+_35734562_35734573	0.327257	CACAGUG	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr16_-_18937726_18937776	0.326116	CACAGUG	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chrX_+_16804544_16804613	0.323948	CACAGUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr2_-_85555385_85555548	0.323785	CACAGUG	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr5_-_132299313_132299334	0.322855	CACAGUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr4_+_140222609_140222742	0.32262	CACAGUG	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr20_-_14318248_14318264	0.31814	CACAGUG	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr11_-_102323489_102323576	0.317554	CACAGUG	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr2_-_69614373_69614397	0.317143	CACAGUG	ENST00000361060.5|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1 	ENST00000357308.4|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1
hg19_v2_chr19_+_45973120_45973171	0.314528	CACAGUG	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr2_-_43453734_43453751	0.311763	CACAGUG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr3_-_24536253_24536328	0.309833	CACAGUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr9_+_103204553_103204560	0.309156	CACAGUG	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr3_+_16926441_16926463	0.30535	CACAGUG	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr8_-_124286735_124286773	0.304886	CACAGUG	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr12_-_105478339_105478361	0.302618	CACAGUG	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr8_-_10697281_10697365	0.301556	CACAGUG	ENST00000524114.1|PINX1|ENSG00000254093.4|PIN2/TERF1 interacting, telomerase inhibitor 1 	ENST00000553390.1|SOX7|ENSG00000171056.6|SRY (sex determining region Y)-box 7 	ENST00000554914.1|SOX7|ENSG00000258724.1|Transcription factor SOX-7; Uncharacterized protein; cDNA FLJ58508, highly similar to Transcription factor SOX-7
hg19_v2_chr6_+_37225540_37225558	0.301479	CACAGUG	ENST00000373491.3|TBC1D22B|ENSG00000065491.8|TBC1 domain family, member 22B
hg19_v2_chr1_+_70876891_70876917	0.301325	CACAGUG	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr9_+_114659046_114659102	0.301194	CACAGUG	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr10_+_94050913_94050965	0.299257	CACAGUG	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr9_+_118916082_118916108	0.299108	CACAGUG	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr1_-_68299130_68299160	0.297916	CACAGUG	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr1_+_116184566_116184633	0.297172	CACAGUG	ENST00000355485.2|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1 	ENST00000369510.4|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1
hg19_v2_chr1_-_19229248_19229275	0.296948	CACAGUG	ENST00000375341.3|ALDH4A1|ENSG00000159423.12|aldehyde dehydrogenase 4 family, member A1
hg19_v2_chr14_-_23526739_23526766	0.290607	CACAGUG	ENST00000397359.3|CDH24|ENSG00000139880.15|cadherin 24, type 2 	ENST00000487137.2|CDH24|ENSG00000139880.15|cadherin 24, type 2
hg19_v2_chr2_-_166651191_166651213	0.287412	CACAGUG	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr9_+_101867359_101867376	0.28608	CACAGUG	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr1_-_93645818_93645918	0.280994	CACAGUG	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr12_-_110318263_110318320	0.279877	CACAGUG	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr7_-_27239703_27239725	0.279101	CACAGUG	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr1_+_113933581_113933611	0.275189	CACAGUG	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr10_+_127408263_127408308	0.273179	CACAGUG	ENST00000337623.3|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr8_-_91997427_91997504	0.272886	CACAGUG	ENST00000517562.2|RP11-122A3.2|ENSG00000253250.2|chromosome 8 open reading frame 88
hg19_v2_chr8_+_98656336_98656535	0.271333	CACAGUG	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr1_-_92351769_92351787	0.268917	CACAGUG	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr14_-_64194745_64194799	0.268645	CACAGUG	ENST00000247225.6|SGPP1|ENSG00000126821.7|sphingosine-1-phosphate phosphatase 1
hg19_v2_chr12_-_12419703_12419811	0.267604	CACAGUG	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr12_-_90049828_90049847	0.267306	CACAGUG	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr12_-_65146636_65146651	0.26476	CACAGUG	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr7_+_36192758_36192827	0.257643	CACAGUG	ENST00000242108.4|EEPD1|ENSG00000122547.6|endonuclease/exonuclease/phosphatase family domain containing 1
hg19_v2_chrX_+_108780062_108780105	0.251388	CACAGUG	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr6_+_10556215_10556240	0.249908	CACAGUG	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr1_+_193028552_193028589	0.248389	CACAGUG	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr10_-_60027642_60027705	0.246795	CACAGUG	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr5_-_95297678_95297775	0.245533	CACAGUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr18_-_30050395_30050495	0.243788	CACAGUG	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr17_+_56160768_56160786	0.243651	CACAGUG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr5_+_67511524_67511628	0.241932	CACAGUG	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr18_+_67956135_67956144	0.241285	CACAGUG	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr20_-_20693131_20693268	0.238963	CACAGUG	ENST00000202677.7|RALGAPA2|ENSG00000188559.9|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v2_chr12_-_42538657_42538720	0.236054	CACAGUG	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr7_-_127032741_127032777	0.234969	CACAGUG	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr3_+_36421826_36421844	0.233797	CACAGUG	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chr1_+_24286287_24286326	0.233562	CACAGUG	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr17_+_57408994_57409088	0.231823	CACAGUG	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chr9_+_2015335_2015374	0.229407	CACAGUG	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr14_+_37667118_37667192	0.225373	CACAGUG	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr1_+_180601139_180601180	0.225102	CACAGUG	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr7_-_155604967_155605105	0.224983	CACAGUG	ENST00000297261.2|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr15_+_68570062_68570147	0.224768	CACAGUG	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr10_+_69644404_69644427	0.222683	CACAGUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr20_+_34700333_34700348	0.220706	CACAGUG	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr6_+_43968306_43968377	0.219422	CACAGUG	ENST00000442114.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000336600.5|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000439969.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223
hg19_v2_chr5_+_52856456_52856505	0.219069	CACAGUG	ENST00000296684.5|NDUFS4|ENSG00000164258.7|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 	ENST00000506765.1|NDUFS4|ENSG00000164258.7|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
hg19_v2_chr6_-_33160231_33160276	0.217559	CACAGUG	ENST00000395194.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000457788.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000341947.2|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000357486.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374714.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374713.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000395197.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374712.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000361917.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374708.4|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2
hg19_v2_chrX_-_70288234_70288291	0.214901	CACAGUG	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr2_+_157291953_157292003	0.214684	CACAGUG	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr9_+_103235365_103235419	0.212583	CACAGUG	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr1_+_162531294_162531332	0.209559	CACAGUG	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr10_-_71930222_71930280	0.207665	CACAGUG	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr4_+_38665810_38665827	0.206333	CACAGUG	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr3_-_49203744_49203790	0.205941	CACAGUG	ENST00000321895.6|CCDC71|ENSG00000177352.9|coiled-coil domain containing 71
hg19_v2_chr4_+_6784401_6784510	0.204905	CACAGUG	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr5_+_82767284_82767310	0.202274	CACAGUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr9_+_103790991_103791001	0.2005	CACAGUG	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr8_+_76452097_76452126	0.199537	CACAGUG	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr9_-_130742792_130742821	0.198991	CACAGUG	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr1_-_235491462_235491534	0.198298	CACAGUG	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr3_-_196159268_196159345	0.198145	CACAGUG	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chr14_-_31676964_31677017	0.196818	CACAGUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr12_-_111180644_111180744	0.192848	CACAGUG	ENST00000551676.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000550991.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000335007.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000340766.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme
hg19_v2_chr7_-_43965937_43966015	0.192563	CACAGUG	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr2_+_196521458_196521491	0.191664	CACAGUG	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr6_+_157099036_157099086	0.190297	CACAGUG	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr7_-_141401951_141401985	0.189127	CACAGUG	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr10_+_60272814_60272900	0.186945	CACAGUG	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr4_+_140374961_140375016	0.186579	CACAGUG	ENST00000305626.5|RAB33B|ENSG00000172007.5|RAB33B, member RAS oncogene family
hg19_v2_chr7_+_5322561_5322660	0.185216	CACAGUG	ENST00000396872.3|SLC29A4|ENSG00000164638.6|solute carrier family 29 (equilibrative nucleoside transporter), member 4 	ENST00000444741.1|SLC29A4|ENSG00000164638.6|solute carrier family 29 (equilibrative nucleoside transporter), member 4 	ENST00000297195.4|SLC29A4|ENSG00000164638.6|solute carrier family 29 (equilibrative nucleoside transporter), member 4 	ENST00000406453.3|SLC29A4|ENSG00000164638.6|solute carrier family 29 (equilibrative nucleoside transporter), member 4
hg19_v2_chr1_+_32573636_32573673	0.184884	CACAGUG	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr8_-_12612962_12613049	0.180704	CACAGUG	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr1_+_38259540_38259569	0.179333	CACAGUG	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr20_+_2673383_2673525	0.177545	CACAGUG	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr5_+_133984462_133984514	0.17667	CACAGUG	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr7_+_30174426_30174441	0.176506	CACAGUG	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr17_+_38296576_38296604	0.176017	CACAGUG	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr5_+_148960931_148961073	0.172861	CACAGUG	ENST00000333677.6|ARHGEF37|ENSG00000183111.7|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v2_chr18_+_55102917_55102985	0.172613	CACAGUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr17_-_58603568_58603610	0.17253	CACAGUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr1_-_67896095_67896106	0.170669	CACAGUG	ENST00000370994.4|SERBP1|ENSG00000142864.10|SERPINE1 mRNA binding protein 1
hg19_v2_chr12_+_69004619_69004699	0.169899	CACAGUG	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr19_+_6361841_6361877	0.169877	CACAGUG	ENST00000596605.1|CLPP|ENSG00000125656.4|caseinolytic mitochondrial matrix peptidase proteolytic subunit
hg19_v2_chr1_+_97187318_97187380	0.16947	CACAGUG	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr8_-_22550815_22550844	0.169116	CACAGUG	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr12_+_54422142_54422239	0.166916	CACAGUG	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr7_-_23053693_23053715	0.164716	CACAGUG	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr20_+_24449821_24449843	0.164083	CACAGUG	ENST00000376862.3|SYNDIG1|ENSG00000101463.5|synapse differentiation inducing 1
hg19_v2_chr11_+_12695944_12695989	0.163798	CACAGUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr11_+_120107344_120107351	0.163013	CACAGUG	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr7_-_127225620_127225679	0.160962	CACAGUG	ENST00000321407.2|GCC1|ENSG00000179562.2|GRIP and coiled-coil domain containing 1
hg19_v2_chr17_-_53499310_53499353	0.158811	CACAGUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr17_-_41977964_41978013	0.157834	CACAGUG	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr11_-_117186946_117186981	0.155047	CACAGUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr14_+_71374122_71374193	0.154448	CACAGUG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr2_+_170440844_170440897	0.154304	CACAGUG	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr20_+_47662805_47662907	0.15276	CACAGUG	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr1_-_86043921_86043937	0.151171	CACAGUG	ENST00000535924.2|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr19_+_33463127_33463195	0.149173	CACAGUG	ENST00000589646.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000588258.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000590179.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40
hg19_v2_chr3_-_98620500_98620547	0.147527	CACAGUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr5_+_172483347_172483407	0.147031	CACAGUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr6_-_149806105_149806197	0.145799	CACAGUG	ENST00000389942.5|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000416573.2|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000542614.1|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000409806.3|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D
hg19_v2_chr14_+_19553365_19553365	0.14556	CACAGUG	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr16_-_1464688_1464752	0.142767	CACAGUG	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr19_+_19496624_19496660	0.142685	CACAGUG	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr7_+_138916231_138916231	0.142149	CACAGUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr19_+_38397839_38397932	0.14193	CACAGUG	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr5_-_89825328_89825422	0.141597	CACAGUG	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr1_-_40137710_40137824	0.140564	CACAGUG	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr2_+_139259324_139259389	0.140102	CACAGUG	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr6_+_47445467_47445536	0.139913	CACAGUG	ENST00000359314.5|CD2AP|ENSG00000198087.7|CD2-associated protein
hg19_v2_chr14_-_50999307_50999367	0.138422	CACAGUG	ENST00000013125.4|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr6_-_107436473_107436543	0.13835	CACAGUG	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr12_+_862089_862343	0.137712	CACAGUG	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr7_-_27183263_27183287	0.137578	CACAGUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chrX_-_154493791_154493874	0.135908	CACAGUG	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr10_+_104535994_104536014	0.135159	CACAGUG	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr2_-_164592497_164592573	0.133384	CACAGUG	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr4_-_170192185_170192256	0.132564	CACAGUG	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chr1_+_117452669_117452748	0.131218	CACAGUG	ENST00000393203.2|PTGFRN|ENSG00000134247.9|prostaglandin F2 receptor inhibitor
hg19_v2_chr4_-_24914508_24914524	0.130668	CACAGUG	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr8_-_68255912_68255952	0.130377	CACAGUG	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr11_+_118401706_118401803	0.129035	CACAGUG	ENST00000411589.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000442938.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000359862.4|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr11_-_27528301_27528336	0.128494	CACAGUG	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr3_+_73045936_73046128	0.127056	CACAGUG	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr10_-_65225722_65225755	0.12623	CACAGUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr1_+_64239657_64239724	0.125724	CACAGUG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr11_+_121322832_121322912	0.125207	CACAGUG	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr12_-_2944184_2944209	0.124158	CACAGUG	ENST00000337508.4|NRIP2|ENSG00000053702.10|nuclear receptor interacting protein 2
hg19_v2_chr14_+_99947715_99947791	0.124002	CACAGUG	ENST00000389879.5|CCNK|ENSG00000090061.13|cyclin K 	ENST00000557441.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555049.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555842.1|CCNK|ENSG00000090061.13|cyclin K
hg19_v2_chr8_-_28243934_28243993	0.122844	CACAGUG	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr1_+_24104869_24104918	0.121661	CACAGUG	ENST00000246151.4|PITHD1|ENSG00000057757.5|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
hg19_v2_chr10_-_43903217_43903267	0.120283	CACAGUG	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr21_-_44846999_44847017	0.120238	CACAGUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr12_-_109747023_109747033	0.116768	CACAGUG	ENST00000355216.1|FOXN4|ENSG00000139445.13|forkhead box N4 	ENST00000299162.5|FOXN4|ENSG00000139445.13|forkhead box N4
hg19_v2_chr4_+_79697495_79697538	0.115988	CACAGUG	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr6_+_161412759_161412846	0.115046	CACAGUG	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr2_-_109605663_109605828	0.110585	CACAGUG	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr4_+_52709229_52709345	0.110095	CACAGUG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr20_+_43514315_43514319	0.108846	CACAGUG	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr6_+_117002339_117002400	0.108438	CACAGUG	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr17_-_43568062_43568110	0.108316	CACAGUG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr6_+_136172820_136172846	0.107576	CACAGUG	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr17_-_49337392_49337465	0.107216	CACAGUG	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr17_-_8534067_8534088	0.106052	CACAGUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr3_-_32022733_32022809	0.105776	CACAGUG	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr12_-_109125285_109125372	0.105147	CACAGUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr14_-_20020272_20020272	0.104705	CACAGUG	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr7_-_112579869_112579971	0.104632	CACAGUG	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr15_-_74374891_74374891	0.104177	CACAGUG	ENST00000290438.3|GOLGA6A|ENSG00000159289.6|golgin A6 family, member A
hg19_v2_chr11_-_63439013_63439091	0.103425	CACAGUG	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr5_-_124080203_124080258	0.102207	CACAGUG	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr12_+_32112340_32112358	0.101785	CACAGUG	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr16_-_4588822_4588834	0.101549	CACAGUG	ENST00000564828.1|CDIP1|ENSG00000089486.12|cell death-inducing p53 target 1
hg19_v2_chr4_-_23891693_23891706	0.10108	CACAGUG	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr1_+_231297798_231297858	0.100706	CACAGUG	ENST00000444294.3|TRIM67|ENSG00000119283.11|tripartite motif containing 67
hg19_v2_chr17_-_40761375_40761409	0.100342	CACAGUG	ENST00000543197.1|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C 	ENST00000309428.5|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C
hg19_v2_chr1_-_114355083_114355123	0.100162	CACAGUG	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr2_+_242641442_242641478	0.0999416	CACAGUG	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr7_-_103848405_103848495	0.0998275	CACAGUG	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr1_+_213123915_213123955	0.099485	CACAGUG	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr6_+_142622991_142623004	0.0981351	CACAGUG	ENST00000230173.6|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000367608.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr17_-_71088797_71088851	0.0981216	CACAGUG	ENST00000580557.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579732.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000578620.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000542342.2|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000255559.3|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579018.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11
hg19_v2_chr4_-_71532339_71532377	0.0966161	CACAGUG	ENST00000254801.4|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr2_+_201676256_201676323	0.0957227	CACAGUG	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chrX_+_152082969_152083034	0.0945497	CACAGUG	ENST00000535861.1|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000539731.1|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000449285.2|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000318504.7|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000324823.6|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000370268.4|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain) 	ENST00000370270.2|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain)
hg19_v2_chr6_-_33547975_33547999	0.0936221	CACAGUG	ENST00000442998.2|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1 	ENST00000360661.5|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1
hg19_v2_chr2_+_148778570_148778589	0.0931456	CACAGUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr12_-_77459306_77459365	0.0923742	CACAGUG	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr20_+_5107420_5107432	0.0911424	CACAGUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr1_+_2985760_2985775	0.091063	CACAGUG	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr5_+_135468516_135468621	0.0909934	CACAGUG	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr3_+_43732362_43732408	0.0905304	CACAGUG	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr14_-_91884115_91884127	0.0896802	CACAGUG	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr7_-_105029329_105029376	0.0890204	CACAGUG	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr6_-_89673280_89673349	0.0888982	CACAGUG	ENST00000369475.3|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000369485.4|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000538899.1|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000265607.6|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase
hg19_v2_chr3_-_136471204_136471249	0.0888046	CACAGUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr9_+_133454943_133455020	0.0886306	CACAGUG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr17_+_29421900_29421951	0.0885567	CACAGUG	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr10_-_70287231_70287290	0.0870987	CACAGUG	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chrX_+_70316005_70316047	0.0869301	CACAGUG	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chr1_-_95392635_95392834	0.0861599	CACAGUG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr6_-_146135880_146135952	0.0857026	CACAGUG	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr5_-_56247935_56247959	0.0832192	CACAGUG	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr11_-_129062093_129062184	0.0821801	CACAGUG	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr22_-_37823468_37823528	0.0821582	CACAGUG	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr8_+_28351707_28351781	0.0820055	CACAGUG	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr1_+_15943995_15944014	0.0818832	CACAGUG	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr8_-_17104356_17104395	0.0807894	CACAGUG	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr16_+_66914264_66914516	0.0800889	CACAGUG	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr9_-_88714421_88714506	0.0792139	CACAGUG	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr17_-_33446820_33446899	0.079013	CACAGUG	ENST00000592577.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000590016.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000345365.6|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000360276.3|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000357906.3|RAD51D|ENSG00000185379.16|RAD51 paralog D
hg19_v2_chr7_+_45039783_45039821	0.0789569	CACAGUG	ENST00000258781.6|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2 	ENST00000541586.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2 	ENST00000544363.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr18_-_268019_268064	0.0779528	CACAGUG	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr6_+_133562472_133562556	0.0779274	CACAGUG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr5_-_89770582_89770603	0.0766166	CACAGUG	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr2_-_197791441_197791525	0.076604	CACAGUG	ENST00000409475.1|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000354764.4|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000374738.3|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1
hg19_v2_chr1_-_184943610_184943682	0.0763061	CACAGUG	ENST00000367511.3|FAM129A|ENSG00000135842.12|family with sequence similarity 129, member A
hg19_v2_chr9_+_131445928_131445934	0.0760642	CACAGUG	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr12_+_105501487_105501562	0.0757787	CACAGUG	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr1_-_154474589_154474589	0.0755554	CACAGUG	ENST00000304760.2|SHE|ENSG00000169291.5|Src homology 2 domain containing E
hg19_v2_chr5_+_112312416_112312440	0.0754481	CACAGUG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr5_+_137774706_137774806	0.0753072	CACAGUG	ENST00000378339.2|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000254901.5|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000506158.1|REEP2|ENSG00000132563.11|receptor accessory protein 2
hg19_v2_chr3_-_15563229_15563265	0.0736977	CACAGUG	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr19_-_17356697_17356762	0.0735861	CACAGUG	ENST00000291442.3|NR2F6|ENSG00000160113.5|nuclear receptor subfamily 2, group F, member 6
hg19_v2_chr8_-_42698433_42698486	0.073241	CACAGUG	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr2_+_238536207_238536290	0.0724924	CACAGUG	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chrX_+_133507327_133507386	0.0720207	CACAGUG	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr18_-_5296001_5296045	0.0716427	CACAGUG	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr3_+_193310918_193310934	0.0714385	CACAGUG	ENST00000361908.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000392438.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361510.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361715.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361828.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361150.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant)
hg19_v2_chr17_-_7232585_7232712	0.0710884	CACAGUG	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chrX_+_150151752_150151762	0.0710816	CACAGUG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr9_+_124413873_124413969	0.0705317	CACAGUG	ENST00000408936.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr1_+_204494618_204494676	0.0704486	CACAGUG	ENST00000367180.1|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse) 	ENST00000391947.2|MDM4|ENSG00000198625.8|Mdm4 p53 binding protein homolog (mouse)
hg19_v2_chr17_+_72983674_72983768	0.0701613	CACAGUG	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr1_+_16693578_16693760	0.0699284	CACAGUG	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr2_-_25142708_25142783	0.0698504	CACAGUG	ENST00000260600.5|ADCY3|ENSG00000138031.10|adenylate cyclase 3 	ENST00000435135.1|ADCY3|ENSG00000138031.10|adenylate cyclase 3
hg19_v2_chr2_+_241508039_241508104	0.0681365	CACAGUG	ENST00000270357.4|RNPEPL1|ENSG00000142327.7|arginyl aminopeptidase (aminopeptidase B)-like 1
hg19_v2_chr6_+_114178512_114178586	0.0671772	CACAGUG	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr2_-_214014959_214015058	0.0656535	CACAGUG	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr12_+_67663056_67663067	0.0648141	CACAGUG	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chrX_-_25034065_25034088	0.0642741	CACAGUG	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr3_-_141868357_141868393	0.0632586	CACAGUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr2_-_24583168_24583179	0.0621797	CACAGUG	ENST00000361999.3|ITSN2|ENSG00000198399.10|intersectin 2
hg19_v2_chr16_-_402639_402707	0.061976	CACAGUG	ENST00000262320.3|AXIN1|ENSG00000103126.10|axin 1
hg19_v2_chr14_-_27066636_27066701	0.0614593	CACAGUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr5_+_133861790_133861829	0.0613951	CACAGUG	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr12_+_110152033_110152033	0.0610649	CACAGUG	ENST00000538780.1|FAM222A|ENSG00000139438.5|family with sequence similarity 222, member A
hg19_v2_chr2_+_120517174_120517207	0.0609062	CACAGUG	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr3_-_72496035_72496069	0.0597344	CACAGUG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr15_-_59949693_59949751	0.0596029	CACAGUG	ENST00000396063.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396064.3|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000484743.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000559706.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396060.2|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa
hg19_v2_chr4_-_147442982_147443019	0.0593639	CACAGUG	ENST00000511374.1|SLC10A7|ENSG00000120519.10|solute carrier family 10, member 7 	ENST00000264986.3|SLC10A7|ENSG00000120519.10|solute carrier family 10, member 7
hg19_v2_chr13_-_50367057_50367142	0.0585329	CACAGUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr15_+_44719394_44719579	0.0584636	CACAGUG	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr4_+_71768043_71768095	0.0584467	CACAGUG	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr1_-_99470558_99470609	0.0581538	CACAGUG	ENST00000370188.3|LPPR5|ENSG00000117598.7|Lipid phosphate phosphatase-related protein type 5
hg19_v2_chr3_-_113465065_113465147	0.0579683	CACAGUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr7_-_152133059_152133102	0.0570978	CACAGUG	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr16_-_53737795_53737850	0.0557423	CACAGUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr9_-_140196703_140196744	0.0547077	CACAGUG	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr11_-_10562710_10562782	0.0545558	CACAGUG	ENST00000528665.1|RNF141|ENSG00000110315.2|ring finger protein 141 	ENST00000265981.2|RNF141|ENSG00000110315.2|ring finger protein 141
hg19_v2_chr17_-_2304365_2304412	0.0535721	CACAGUG	ENST00000575394.1|MNT|ENSG00000070444.10|MAX network transcriptional repressor 	ENST00000174618.4|MNT|ENSG00000070444.10|MAX network transcriptional repressor
hg19_v2_chr12_-_54673871_54673925	0.0533039	CACAGUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr17_-_36762095_36762212	0.0531996	CACAGUG	ENST00000578925.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1 	ENST00000264659.7|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr16_+_57126428_57126450	0.0531494	CACAGUG	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr5_+_7396141_7396324	0.052836	CACAGUG	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr6_+_149068464_149068559	0.0505555	CACAGUG	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr16_-_68482440_68482591	0.0498948	CACAGUG	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr12_-_117628333_117628339	0.0494836	CACAGUG	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr10_-_105615164_105615323	0.0493298	CACAGUG	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr1_-_45452240_45452287	0.0490365	CACAGUG	ENST00000372183.3|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000372182.4|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000360403.2|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
hg19_v2_chr14_-_39901618_39901704	0.0487995	CACAGUG	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr9_+_132934835_132934857	0.0485247	CACAGUG	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr7_-_27205136_27205164	0.0484941	CACAGUG	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr4_+_170541660_170541677	0.0473009	CACAGUG	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr15_+_40733387_40733416	0.0472967	CACAGUG	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr3_-_87040233_87040257	0.0469549	CACAGUG	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr6_+_163835669_163835693	0.0467408	CACAGUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_-_1524015_1524108	0.0461968	CACAGUG	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr3_+_182511266_182511308	0.0461512	CACAGUG	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr15_-_83018198_83018198	0.0454905	CACAGUG	ENST00000557886.1|RP13-996F3.4|ENSG00000259243.1|golgin A6 family-like 19
hg19_v2_chr10_+_97803151_97803348	0.0453245	CACAGUG	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr11_-_60674037_60674079	0.0451864	CACAGUG	ENST00000541371.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19 	ENST00000227524.4|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr6_-_80657292_80657301	0.0451718	CACAGUG	ENST00000369816.4|ELOVL4|ENSG00000118402.5|ELOVL fatty acid elongase 4
hg19_v2_chr3_-_119813264_119813272	0.0451283	CACAGUG	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr2_-_11606275_11606289	0.0448151	CACAGUG	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr11_-_82611448_82611639	0.0445991	CACAGUG	ENST00000393399.2|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C) 	ENST00000313010.3|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C)
hg19_v2_chr17_-_7137857_7137869	0.0443768	CACAGUG	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr8_+_38614807_38614851	0.0442112	CACAGUG	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr17_+_1958388_1958404	0.0422144	CACAGUG	ENST00000399849.3|HIC1|ENSG00000177374.8|hypermethylated in cancer 1
hg19_v2_chr1_-_161059380_161059392	0.0419547	CACAGUG	ENST00000368012.3|PVRL4|ENSG00000143217.7|poliovirus receptor-related 4
hg19_v2_chr18_+_32558208_32558340	0.0415386	CACAGUG	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr4_+_699537_699600	0.0400529	CACAGUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr4_+_3076388_3076431	0.0396469	CACAGUG	ENST00000355072.5|HTT|ENSG00000197386.6|huntingtin
hg19_v2_chr5_-_31532160_31532221	0.0392975	CACAGUG	ENST00000511367.2|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III 	ENST00000513349.1|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III
hg19_v2_chr6_+_33172407_33172419	0.0389346	CACAGUG	ENST00000374662.3|HSD17B8|ENSG00000204228.3|hydroxysteroid (17-beta) dehydrogenase 8
hg19_v2_chr1_-_205326022_205326074	0.0384048	CACAGUG	ENST00000367155.3|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A
hg19_v2_chr16_+_2587998_2588011	0.0382093	CACAGUG	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr5_-_132073210_132073330	0.0381021	CACAGUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr20_+_60718785_60718853	0.0374362	CACAGUG	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr15_+_73344791_73344900	0.0363912	CACAGUG	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr17_+_54911444_54911564	0.0362696	CACAGUG	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr15_+_75575176_75575176	0.0361907	CACAGUG	ENST00000434739.3|GOLGA6D|ENSG00000140478.10|golgin A6 family, member D
hg19_v2_chr15_-_82939157_82939157	0.0355633	CACAGUG	ENST00000559949.1|RP13-996F3.5|ENSG00000215749.8|golgin A6 family-like 18
hg19_v2_chr12_-_14133053_14133159	0.0353135	CACAGUG	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr2_-_178128528_178128574	0.0347954	CACAGUG	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr6_+_71377473_71377520	0.0342363	CACAGUG	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr15_+_84904525_84904525	0.0341624	CACAGUG	ENST00000510439.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr14_+_37131058_37131139	0.0330127	CACAGUG	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr12_+_72056773_72056796	0.0328727	CACAGUG	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr16_+_66400533_66400545	0.0327859	CACAGUG	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr2_+_27070964_27071027	0.0325671	CACAGUG	ENST00000288699.6|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr22_+_39898325_39898382	0.0310468	CACAGUG	ENST00000325301.2|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1 	ENST00000404569.1|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1
hg19_v2_chr12_+_94542459_94542513	0.0309123	CACAGUG	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr20_-_61569227_61569287	0.0294606	CACAGUG	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr20_+_30795664_30795743	0.029224	CACAGUG	ENST00000375749.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000375730.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000539210.1|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1
hg19_v2_chr13_-_25746416_25746433	0.0286904	CACAGUG	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr15_-_43398274_43398318	0.0283499	CACAGUG	ENST00000382177.2|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1 	ENST00000290650.4|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1
hg19_v2_chr2_-_119605253_119605264	0.0282616	CACAGUG	ENST00000295206.6|EN1|ENSG00000163064.6|engrailed homeobox 1
hg19_v2_chr22_-_22221900_22221970	0.0274713	CACAGUG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr2_+_30454390_30454409	0.0265712	CACAGUG	ENST00000395323.3|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000406087.1|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000404397.1|LBH|ENSG00000213626.7|limb bud and heart development
hg19_v2_chr5_-_176730676_176730730	0.0262807	CACAGUG	ENST00000393611.2|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family 	ENST00000303251.6|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family 	ENST00000303270.6|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family
hg19_v2_chr9_-_110251836_110251927	0.0256971	CACAGUG	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chrX_+_77154935_77155012	0.0256664	CACAGUG	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr2_-_54087066_54087297	0.0252515	CACAGUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr2_+_135676381_135676435	0.0251719	CACAGUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr4_-_90229142_90229217	0.0249844	CACAGUG	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr9_+_34958254_34958321	0.0247156	CACAGUG	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr1_-_117210290_117210376	0.0246025	CACAGUG	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr17_+_47572647_47572662	0.0240675	CACAGUG	ENST00000172229.3|NGFR|ENSG00000064300.4|nerve growth factor receptor
hg19_v2_chr10_+_46997926_46997926	0.0237639	CACAGUG	ENST00000374314.4|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr19_-_50143452_50143468	0.0236747	CACAGUG	ENST00000246792.3|RRAS|ENSG00000126458.3|related RAS viral (r-ras) oncogene homolog
hg19_v2_chr12_+_83080659_83080693	0.023634	CACAGUG	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr5_+_36876833_36876894	0.0232863	CACAGUG	ENST00000282516.8|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila) 	ENST00000448238.2|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila)
hg19_v2_chr8_-_103425047_103425069	0.0231383	CACAGUG	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr6_+_44238203_44238222	0.0229322	CACAGUG	ENST00000451188.2|TMEM151B|ENSG00000178233.13|transmembrane protein 151B
hg19_v2_chr2_+_148602058_148602185	0.022892	CACAGUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr17_+_42148097_42148119	0.0226124	CACAGUG	ENST00000269097.4|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr1_-_217804377_217804446	0.0224011	CACAGUG	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr11_-_74109422_74109518	0.0218369	CACAGUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr6_-_53530474_53530508	0.0217615	CACAGUG	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chr2_+_105471969_105471969	0.021512	CACAGUG	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr17_-_79885576_79885624	0.0212589	CACAGUG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr12_+_56137064_56137183	0.0211643	CACAGUG	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr6_+_148663729_148663847	0.020646	CACAGUG	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr7_+_66386204_66386249	0.0204525	CACAGUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr12_+_27396901_27397108	0.0189125	CACAGUG	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chrX_+_106765680_106765680	0.0188175	CACAGUG	ENST00000276185.4|FRMPD3|ENSG00000147234.6|FERM and PDZ domain containing 3
hg19_v2_chr6_-_8064567_8064652	0.0177613	CACAGUG	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr2_+_24714729_24714927	0.0173993	CACAGUG	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr4_+_184826418_184826522	0.0167428	CACAGUG	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr9_+_129089088_129089163	0.0158686	CACAGUG	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr10_+_21823079_21823102	0.015824	CACAGUG	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr2_+_208394616_208394655	0.0155602	CACAGUG	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr3_-_171178157_171178225	0.0154709	CACAGUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr9_-_130829588_130829636	0.0153329	CACAGUG	ENST00000373078.4|NAIF1|ENSG00000171169.8|nuclear apoptosis inducing factor 1
hg19_v2_chr9_-_74525658_74525658	0.0149429	CACAGUG	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr19_+_15218180_15218249	0.0148202	CACAGUG	ENST00000342784.2|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000597977.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000600440.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg19_v2_chr20_-_60640866_60640901	0.0146798	CACAGUG	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chrX_-_129402857_129402880	0.0146695	CACAGUG	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr6_+_105404899_105404931	0.014597	CACAGUG	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr11_+_66234216_66234424	0.0145397	CACAGUG	ENST00000349459.6|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000320740.7|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000524466.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000526296.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3
hg19_v2_chr4_-_111119804_111119832	0.014473	CACAGUG	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_-_116164306_116164380	0.0144173	CACAGUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr6_-_48036363_48036425	0.0140032	CACAGUG	ENST00000543600.1|PTCHD4|ENSG00000244694.3|patched domain containing 4 	ENST00000398738.2|PTCHD4|ENSG00000244694.3|patched domain containing 4 	ENST00000339488.4|PTCHD4|ENSG00000244694.3|patched domain containing 4
hg19_v2_chr16_-_30107491_30107569	0.0135191	CACAGUG	ENST00000566134.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000565110.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398841.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398838.4|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila)
hg19_v2_chr10_-_15762124_15762149	0.0129199	CACAGUG	ENST00000378076.3|ITGA8|ENSG00000077943.7|integrin, alpha 8
hg19_v2_chr10_-_61666267_61666414	0.0128915	CACAGUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr1_-_35658736_35658754	0.0128521	CACAGUG	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr11_+_33278811_33279133	0.0119111	CACAGUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr3_+_132136331_132136378	0.0100224	CACAGUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr17_-_46692287_46692317	0.00952144	CACAGUG	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr1_+_110082487_110082535	0.00889653	CACAGUG	ENST00000527748.1|GPR61|ENSG00000156097.8|G protein-coupled receptor 61
hg19_v2_chr4_+_71587669_71587752	0.00857279	CACAGUG	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr18_-_70535177_70535254	0.00767421	CACAGUG	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr7_+_21467642_21467671	0.00744268	CACAGUG	ENST00000222584.3|SP4|ENSG00000105866.9|Sp4 transcription factor 	ENST00000432066.2|SP4|ENSG00000105866.9|Sp4 transcription factor
hg19_v2_chr2_+_46926048_46926095	0.00739244	CACAGUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr1_+_113161778_113161820	0.00684848	CACAGUG	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr10_-_131762105_131762105	0.0066708	CACAGUG	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr11_-_62572901_62572964	0.00658623	CACAGUG	ENST00000439713.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531131.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000530875.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531709.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000294172.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1
hg19_v2_chr9_-_3525968_3526016	0.00592971	CACAGUG	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr15_-_82641706_82641706	0.00584527	CACAGUG	ENST00000439287.4|GOLGA6L10|ENSG00000205281.6|golgin A6 family-like 10
hg19_v2_chr1_-_21671968_21672009	0.00538885	CACAGUG	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr16_+_67143880_67144050	0.00519542	CACAGUG	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr16_+_67876180_67876242	0.00491634	CACAGUG	ENST00000303596.1|THAP11|ENSG00000168286.1|THAP domain containing 11
hg19_v2_chr18_-_23670546_23670605	0.00482167	CACAGUG	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr8_-_67525473_67525518	0.00452032	CACAGUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr16_-_47177874_47177922	0.00402036	CACAGUG	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr19_+_19322758_19322782	0.0037587	CACAGUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr13_+_33160553_33160564	0.00241884	CACAGUG	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr8_+_22437965_22438003	0.00225832	CACAGUG	ENST00000409141.1|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000265810.4|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr8_-_81787006_81787031	0.00145207	CACAGUG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr16_+_66878814_66878843	0.00113008	CACAGUG	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr1_+_110453203_110453255	0.0011176	CACAGUG	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr20_-_50384864_50384943	0.000590358	CACAGUG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chrX_+_51486481_51486549	0.000297949	CACAGUG	ENST00000340438.4|GSPT2|ENSG00000189369.7|G1 to S phase transition 2
hg19_v2_chr10_+_111967345_111967442	0.000244982	CACAGUG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr9_-_136242909_136242953	0.000126802	CACAGUG	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr10_+_35535943_35535977	2.28192e-05	CACAGUG	ENST00000490012.2|CCNY|ENSG00000108100.13|cyclin Y 	ENST00000374706.1|CCNY|ENSG00000108100.13|cyclin Y 	ENST00000493157.2|CCNY|ENSG00000108100.13|cyclin Y
