hg19_v2_chr3_+_187930719_187930729	0.0270115	AUGACAC	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chrX_+_56590002_56590072	0.0199942	AUGACAC	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr10_-_98346801_98346812	0.0195378	AUGACAC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr10_+_89622870_89622870	0.0194577	AUGACAC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr12_+_2986359_2986421	0.0181757	AUGACAC	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr7_-_92219698_92219713	0.0178103	AUGACAC	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr6_-_136610911_136610990	0.0153073	AUGACAC	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr5_+_77656339_77656362	0.0150064	AUGACAC	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr14_-_77843390_77843462	0.0148672	AUGACAC	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr2_+_173940442_173940625	0.0144363	AUGACAC	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr15_-_35261996_35262040	0.0128891	AUGACAC	ENST00000156471.5|AQR|ENSG00000021776.6|aquarius intron-binding spliceosomal factor
hg19_v2_chr10_+_18948311_18948417	0.0126987	AUGACAC	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr1_+_51701924_51702001	0.011984	AUGACAC	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chrX_-_39956656_39956751	0.0116697	AUGACAC	ENST00000397354.3|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378444.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chrX_-_118699325_118699397	0.0111857	AUGACAC	ENST00000320339.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000371594.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000536133.1|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56
hg19_v2_chr12_-_12674032_12674059	0.0109198	AUGACAC	ENST00000298573.4|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr3_-_24536253_24536328	0.0108666	AUGACAC	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr12_-_65146636_65146651	0.0106634	AUGACAC	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr5_-_132299313_132299334	0.0103314	AUGACAC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr3_-_186080012_186080030	0.010046	AUGACAC	ENST00000544847.1|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa 	ENST00000265022.3|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa
hg19_v2_chr17_-_65362678_65362743	0.0100352	AUGACAC	ENST00000357146.4|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENST00000356126.3|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
hg19_v2_chr15_-_27018175_27018241	0.00982085	AUGACAC	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chrX_-_119694538_119694555	0.00898533	AUGACAC	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr1_+_111991474_111991558	0.00868357	AUGACAC	ENST00000369722.3|ATP5F1|ENSG00000116459.6|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v2_chr6_-_86352642_86352709	0.00866415	AUGACAC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr14_-_91976488_91976661	0.00841385	AUGACAC	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr5_+_135468516_135468621	0.00826333	AUGACAC	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr3_-_150481164_150481179	0.00804942	AUGACAC	ENST00000312960.3|SIAH2|ENSG00000181788.3|siah E3 ubiquitin protein ligase 2
hg19_v2_chr5_+_141348598_141348626	0.0076473	AUGACAC	ENST00000394520.2|RNF14|ENSG00000013561.13|ring finger protein 14 	ENST00000347642.3|RNF14|ENSG00000013561.13|ring finger protein 14
hg19_v2_chr8_+_75512010_75512101	0.006904	AUGACAC	ENST00000518190.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein  	ENST00000523118.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein
hg19_v2_chr11_-_77532050_77532066	0.00683402	AUGACAC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr5_-_107717058_107717155	0.00675864	AUGACAC	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr14_-_35182994_35183034	0.00666037	AUGACAC	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr2_+_113033164_113033219	0.00661629	AUGACAC	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr4_+_144434584_144434709	0.00576942	AUGACAC	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr2_+_114647504_114647557	0.00461782	AUGACAC	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr3_-_125094093_125094198	0.00426218	AUGACAC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_-_25194963_25194976	0.00358444	AUGACAC	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr10_-_75910789_75910821	0.00274722	AUGACAC	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr7_-_158380465_158380523	0.00232362	AUGACAC	ENST00000389413.3|PTPRN2|ENSG00000155093.13|protein tyrosine phosphatase, receptor type, N polypeptide 2 	ENST00000409483.1|PTPRN2|ENSG00000155093.13|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg19_v2_chr1_-_85156216_85156240	0.00231956	AUGACAC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr4_-_170192185_170192256	0.0020706	AUGACAC	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chr15_-_83316254_83316368	0.00191222	AUGACAC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr18_-_54305658_54305876	0.00189978	AUGACAC	ENST00000586262.1|TXNL1|ENSG00000091164.8|thioredoxin-like 1 	ENST00000217515.6|TXNL1|ENSG00000091164.8|thioredoxin-like 1
hg19_v2_chr6_+_138483058_138483159	0.00183691	AUGACAC	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr20_-_20693131_20693268	0.00157403	AUGACAC	ENST00000202677.7|RALGAPA2|ENSG00000188559.9|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v2_chr6_-_137113604_137113666	0.00136035	AUGACAC	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr15_+_59063478_59063561	0.000644286	AUGACAC	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
