hg19_v2_chr1_-_235491462_235491534	0.370852	AGUGCUU	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr11_-_102962929_102962944	0.335062	AGUGCUU	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr18_+_9136758_9136852	0.27062	AGUGCUU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr18_-_18691739_18691812	0.233621	AGUGCUU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr3_+_30648066_30648167	0.217634	AGUGCUU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr12_+_19592602_19592648	0.210367	AGUGCUU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr2_+_174219548_174219621	0.205058	AGUGCUU	ENST00000347703.3|CDCA7|ENSG00000144354.9|cell division cycle associated 7 	ENST00000392567.2|CDCA7|ENSG00000144354.9|cell division cycle associated 7 	ENST00000306721.3|CDCA7|ENSG00000144354.9|cell division cycle associated 7 	ENST00000410101.3|CDCA7|ENSG00000144354.9|cell division cycle associated 7 	ENST00000410019.3|CDCA7|ENSG00000144354.9|cell division cycle associated 7
hg19_v2_chrX_-_83442915_83442985	0.198493	AGUGCUU	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr7_-_28220354_28220441	0.190641	AGUGCUU	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr8_-_53626974_53627032	0.180222	AGUGCUU	ENST00000435644.2|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000518710.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000025008.5|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000517963.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1
hg19_v2_chr12_+_20522179_20522203	0.17586	AGUGCUU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr4_+_174089904_174089921	0.171049	AGUGCUU	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr1_-_36235529_36235543	0.161031	AGUGCUU	ENST00000318121.3|CLSPN|ENSG00000092853.9|claspin 	ENST00000373220.3|CLSPN|ENSG00000092853.9|claspin 	ENST00000520551.1|CLSPN|ENSG00000092853.9|claspin
hg19_v2_chr11_+_58346584_58346607	0.154361	AGUGCUU	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr3_+_179065474_179065530	0.14615	AGUGCUU	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr2_+_173940442_173940625	0.145336	AGUGCUU	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr2_+_198380289_198380305	0.143605	AGUGCUU	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr2_+_118846008_118846100	0.143109	AGUGCUU	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr7_+_77325738_77325789	0.142524	AGUGCUU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr13_-_79233314_79233331	0.141087	AGUGCUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr12_+_104458235_104458344	0.138915	AGUGCUU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr20_+_8112824_8112925	0.136673	AGUGCUU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr17_-_38083843_38083864	0.136139	AGUGCUU	ENST00000304046.2|ORMDL3|ENSG00000172057.5|ORM1-like 3 (S. cerevisiae) 	ENST00000579695.1|ORMDL3|ENSG00000172057.5|ORM1-like 3 (S. cerevisiae)
hg19_v2_chr12_+_56137064_56137183	0.129244	AGUGCUU	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr6_-_111136513_111136525	0.125907	AGUGCUU	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr4_-_53525406_53525502	0.125569	AGUGCUU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr20_+_33814457_33814506	0.12371	AGUGCUU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr12_-_46766577_46766650	0.121391	AGUGCUU	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr9_-_123476719_123476810	0.118819	AGUGCUU	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chrX_-_20284958_20285039	0.118727	AGUGCUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr22_+_30279144_30279202	0.118111	AGUGCUU	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr21_-_27542972_27543138	0.118071	AGUGCUU	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr5_-_32444828_32444872	0.117485	AGUGCUU	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr17_+_5185552_5185595	0.115136	AGUGCUU	ENST00000262477.6|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000408982.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000575991.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000537505.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000546142.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1
hg19_v2_chr1_+_42846443_42846502	0.113	AGUGCUU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr11_-_77532050_77532066	0.112615	AGUGCUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr6_+_157099036_157099086	0.111508	AGUGCUU	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr3_+_88188254_88188254	0.111466	AGUGCUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr9_+_108210279_108210435	0.11146	AGUGCUU	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr17_+_44928946_44928953	0.110668	AGUGCUU	ENST00000290015.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B 	ENST00000393461.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B
hg19_v2_chr6_-_108395907_108395971	0.110039	AGUGCUU	ENST00000193322.3|OSTM1|ENSG00000081087.10|osteopetrosis associated transmembrane protein 1
hg19_v2_chr13_+_97874574_97874609	0.109031	AGUGCUU	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr6_-_99395787_99395878	0.107535	AGUGCUU	ENST00000369244.2|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4 	ENST00000229971.1|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4
hg19_v2_chr1_+_33207381_33207486	0.10745	AGUGCUU	ENST00000401073.2|KIAA1522|ENSG00000162522.6|KIAA1522
hg19_v2_chr10_+_112631547_112631596	0.106587	AGUGCUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr4_+_99916765_99916776	0.105849	AGUGCUU	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr12_+_45609893_45609909	0.104625	AGUGCUU	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr16_-_57318566_57318599	0.104139	AGUGCUU	ENST00000569059.1|PLLP|ENSG00000102934.5|plasmolipin 	ENST00000219207.5|PLLP|ENSG00000102934.5|plasmolipin
hg19_v2_chr8_-_103876965_103877012	0.103785	AGUGCUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr12_-_65146636_65146651	0.101043	AGUGCUU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr20_+_44462430_44462476	0.099879	AGUGCUU	ENST00000462307.1|SNX21|ENSG00000124104.14|sorting nexin family member 21
hg19_v2_chr1_-_173991434_173991556	0.0980985	AGUGCUU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr11_-_94964354_94964374	0.097085	AGUGCUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chrX_+_41192595_41192651	0.0959533	AGUGCUU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr12_-_42538657_42538720	0.0942643	AGUGCUU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr3_-_125094093_125094198	0.0940046	AGUGCUU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr18_-_72921303_72921339	0.0935036	AGUGCUU	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr1_-_78148324_78148365	0.0913995	AGUGCUU	ENST00000370801.3|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3 	ENST00000433749.1|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3
hg19_v2_chr12_-_31744031_31744059	0.0896177	AGUGCUU	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr3_-_149093499_149093499	0.0891452	AGUGCUU	ENST00000472441.1|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr6_+_18155560_18155624	0.0887536	AGUGCUU	ENST00000546309.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000388870.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000397244.1|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B
hg19_v2_chr1_-_205180664_205180727	0.0859509	AGUGCUU	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr1_+_89149905_89149995	0.0851456	AGUGCUU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr13_-_30424821_30424847	0.0830148	AGUGCUU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr17_-_5138099_5138164	0.0825412	AGUGCUU	ENST00000571800.1|SCIMP|ENSG00000161929.10|SLP adaptor and CSK interacting membrane protein 	ENST00000574081.1|SCIMP|ENSG00000161929.10|SLP adaptor and CSK interacting membrane protein 	ENST00000399600.4|SCIMP|ENSG00000161929.10|SLP adaptor and CSK interacting membrane protein 	ENST00000574297.1|SCIMP|ENSG00000161929.10|SLP adaptor and CSK interacting membrane protein
hg19_v2_chr20_+_30865429_30865480	0.0813353	AGUGCUU	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr7_+_99613195_99613206	0.0801204	AGUGCUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr8_+_58907104_58907131	0.0790974	AGUGCUU	ENST00000361488.3|FAM110B|ENSG00000169122.7|family with sequence similarity 110, member B
hg19_v2_chr11_-_27494279_27494308	0.0780047	AGUGCUU	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr1_+_112162381_112162431	0.0764693	AGUGCUU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr2_+_203499901_203499911	0.0760714	AGUGCUU	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr11_-_119599794_119599857	0.0753689	AGUGCUU	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr2_+_178257372_178257523	0.072346	AGUGCUU	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr16_-_66730583_66730689	0.0722263	AGUGCUU	ENST00000330687.4|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000394106.2|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000563952.1|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4
hg19_v2_chr17_-_79919154_79919169	0.0716833	AGUGCUU	ENST00000409678.3|NOTUM|ENSG00000185269.7|notum pectinacetylesterase homolog (Drosophila)
hg19_v2_chrX_-_20134990_20135060	0.0715646	AGUGCUU	ENST00000379651.3|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2 	ENST00000443379.3|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2 	ENST00000379643.5|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2
hg19_v2_chr3_-_56835967_56835995	0.0708075	AGUGCUU	ENST00000495373.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000296315.3|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr1_+_214776516_214776565	0.0706701	AGUGCUU	ENST00000366955.3|CENPF|ENSG00000117724.8|centromere protein F, 350/400kDa
hg19_v2_chr6_-_90121938_90122025	0.0703572	AGUGCUU	ENST00000369415.4|RRAGD|ENSG00000025039.10|Ras-related GTP binding D
hg19_v2_chr19_-_2050852_2050895	0.0681821	AGUGCUU	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr15_+_38544476_38544574	0.0681412	AGUGCUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr11_+_32914579_32914724	0.0677226	AGUGCUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr8_+_82644669_82644738	0.0675307	AGUGCUU	ENST00000297265.4|CHMP4C|ENSG00000164695.4|charged multivesicular body protein 4C
hg19_v2_chr10_+_94050913_94050965	0.0668285	AGUGCUU	ENST00000358935.2|MARCH5|ENSG00000198060.5|membrane-associated ring finger (C3HC4) 5
hg19_v2_chr4_-_121993673_121993698	0.0663537	AGUGCUU	ENST00000379692.4|NDNF|ENSG00000173376.9|neuron-derived neurotrophic factor
hg19_v2_chr12_-_76953284_76953341	0.0659327	AGUGCUU	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr14_-_70883708_70883819	0.0656956	AGUGCUU	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr3_-_155572164_155572236	0.0650121	AGUGCUU	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr3_-_176914238_176914277	0.0646294	AGUGCUU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr17_+_28705921_28706000	0.0640252	AGUGCUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr2_+_103236004_103236166	0.0633372	AGUGCUU	ENST00000233969.2|SLC9A2|ENSG00000115616.2|solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
hg19_v2_chr1_-_65432171_65432252	0.061839	AGUGCUU	ENST00000342505.4|JAK1|ENSG00000162434.7|Janus kinase 1
hg19_v2_chr1_-_161039456_161039478	0.0609957	AGUGCUU	ENST00000368016.3|ARHGAP30|ENSG00000186517.9|Rho GTPase activating protein 30
hg19_v2_chr1_-_197169672_197169672	0.0603244	AGUGCUU	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr2_+_220110177_220110262	0.0601717	AGUGCUU	ENST00000409638.3|STK16|ENSG00000115661.9|serine/threonine kinase 16 	ENST00000396738.2|STK16|ENSG00000115661.9|serine/threonine kinase 16 	ENST00000409516.3|STK16|ENSG00000115661.9|serine/threonine kinase 16
hg19_v2_chr5_+_133861790_133861829	0.0596672	AGUGCUU	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr6_+_14117872_14118012	0.0586993	AGUGCUU	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chr1_+_203595903_203595934	0.0578431	AGUGCUU	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr11_-_85780086_85780161	0.0577425	AGUGCUU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr9_-_125693757_125693818	0.0570688	AGUGCUU	ENST00000373656.3|ZBTB26|ENSG00000171448.8|zinc finger and BTB domain containing 26
hg19_v2_chr10_-_61666267_61666414	0.0570241	AGUGCUU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr1_+_61547894_61547980	0.0564314	AGUGCUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr5_+_139027877_139027918	0.0562052	AGUGCUU	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr11_-_67980744_67980882	0.0555337	AGUGCUU	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr6_-_32095968_32096032	0.0554975	AGUGCUU	ENST00000375203.3|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta 	ENST00000375201.4|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta
hg19_v2_chr1_-_57045228_57045242	0.0548674	AGUGCUU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr11_-_110167352_110167447	0.0542435	AGUGCUU	ENST00000533991.1|RDX|ENSG00000137710.10|radixin 	ENST00000528498.1|RDX|ENSG00000137710.10|radixin 	ENST00000405097.1|RDX|ENSG00000137710.10|radixin 	ENST00000528900.1|RDX|ENSG00000137710.10|radixin 	ENST00000530301.1|RDX|ENSG00000137710.10|radixin 	ENST00000343115.4|RDX|ENSG00000137710.10|radixin
hg19_v2_chr16_-_47495170_47495190	0.0534944	AGUGCUU	ENST00000320640.6|ITFG1|ENSG00000129636.8|integrin alpha FG-GAP repeat containing 1 	ENST00000544001.2|ITFG1|ENSG00000129636.8|integrin alpha FG-GAP repeat containing 1
hg19_v2_chr4_-_102268628_102268693	0.0533066	AGUGCUU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr11_+_122526383_122526406	0.0530993	AGUGCUU	ENST00000284273.5|UBASH3B|ENSG00000154127.5|ubiquitin associated and SH3 domain containing B
hg19_v2_chr13_+_39612442_39612482	0.0529628	AGUGCUU	ENST00000470258.1|NHLRC3|ENSG00000188811.8|NHL repeat containing 3 	ENST00000379600.3|NHLRC3|ENSG00000188811.8|NHL repeat containing 3
hg19_v2_chr6_+_158244223_158244301	0.0518166	AGUGCUU	ENST00000392185.3|SNX9|ENSG00000130340.10|sorting nexin 9
hg19_v2_chr15_-_91537723_91537804	0.0513132	AGUGCUU	ENST00000394249.3|PRC1|ENSG00000198901.9|protein regulator of cytokinesis 1 	ENST00000559811.1|PRC1|ENSG00000198901.9|protein regulator of cytokinesis 1 	ENST00000442656.2|PRC1|ENSG00000198901.9|protein regulator of cytokinesis 1 	ENST00000557905.1|PRC1|ENSG00000198901.9|protein regulator of cytokinesis 1 	ENST00000361919.3|PRC1|ENSG00000198901.9|protein regulator of cytokinesis 1
hg19_v2_chr21_-_40685477_40685496	0.0503488	AGUGCUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr9_+_137218362_137218426	0.0501039	AGUGCUU	ENST00000481739.1|RXRA|ENSG00000186350.8|retinoid X receptor, alpha
hg19_v2_chr10_+_85899196_85899273	0.0500869	AGUGCUU	ENST00000372134.3|GHITM|ENSG00000165678.15|growth hormone inducible transmembrane protein
hg19_v2_chr7_-_74867509_74867634	0.0491797	AGUGCUU	ENST00000426327.3|GATSL2|ENSG00000198750.7|GATS protein-like 2
hg19_v2_chr1_-_100598444_100598532	0.0490208	AGUGCUU	ENST00000535161.1|SASS6|ENSG00000156876.8|spindle assembly 6 homolog (C. elegans) 	ENST00000287482.5|SASS6|ENSG00000156876.8|spindle assembly 6 homolog (C. elegans)
hg19_v2_chrX_-_70288234_70288291	0.0480357	AGUGCUU	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr13_-_22033392_22033510	0.0478603	AGUGCUU	ENST00000320220.9|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000415724.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000422251.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000382466.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000542645.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000400590.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20
hg19_v2_chr7_+_139026057_139026130	0.0478467	AGUGCUU	ENST00000541515.3|LUC7L2|ENSG00000269955.2|LUC7-like 2 (S. cerevisiae)
hg19_v2_chr7_-_2354099_2354115	0.0469169	AGUGCUU	ENST00000222990.3|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chr14_-_75593708_75593783	0.0467524	AGUGCUU	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr1_+_87380299_87380475	0.0453824	AGUGCUU	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr15_+_76135622_76135719	0.0447392	AGUGCUU	ENST00000338677.4|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2 	ENST00000267938.4|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2 	ENST00000569423.1|UBE2Q2|ENSG00000140367.7|ubiquitin-conjugating enzyme E2Q family member 2
hg19_v2_chr9_-_130639997_130640022	0.0447085	AGUGCUU	ENST00000373176.1|AK1|ENSG00000106992.13|adenylate kinase 1
hg19_v2_chr9_-_86571628_86571639	0.044376	AGUGCUU	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr11_+_61520075_61520136	0.0441528	AGUGCUU	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr5_-_159827073_159827104	0.0438782	AGUGCUU	ENST00000408953.3|C5orf54|ENSG00000221886.3|chromosome 5 open reading frame 54
hg19_v2_chr16_+_69221028_69221092	0.0427695	AGUGCUU	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr3_-_69435224_69435280	0.0421891	AGUGCUU	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr12_+_50344516_50344537	0.0420723	AGUGCUU	ENST00000199280.3|AQP2|ENSG00000167580.3|aquaporin 2 (collecting duct) 	ENST00000550862.1|AQP2|ENSG00000167580.3|aquaporin 2 (collecting duct)
hg19_v2_chr1_+_213123915_213123955	0.0417758	AGUGCUU	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr11_+_35684288_35684353	0.0417002	AGUGCUU	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr9_-_111929560_111929571	0.0416089	AGUGCUU	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr20_+_5986727_5986755	0.0405905	AGUGCUU	ENST00000378863.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr6_+_149887377_149887430	0.0405342	AGUGCUU	ENST00000367419.5|GINM1|ENSG00000055211.8|glycoprotein integral membrane 1
hg19_v2_chrX_+_108780062_108780105	0.0404125	AGUGCUU	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr2_-_86948245_86948245	0.0404067	AGUGCUU	ENST00000439940.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000604011.1|RNF103-CHMP3|ENSG00000249884.4|RNF103-CHMP3 readthrough
hg19_v2_chr12_+_51442101_51442129	0.0397572	AGUGCUU	ENST00000550929.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000262055.4|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000550442.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000549340.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548209.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548251.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000550814.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000547660.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000380123.2|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548401.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000418425.2|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000547008.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000552739.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1
hg19_v2_chr12_+_88536067_88536100	0.0395279	AGUGCUU	ENST00000549011.1|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3 	ENST00000266712.6|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3 	ENST00000551088.1|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3
hg19_v2_chr10_+_1095416_1095482	0.0385093	AGUGCUU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chrX_-_99986494_99986529	0.0383049	AGUGCUU	ENST00000372989.1|SYTL4|ENSG00000102362.11|synaptotagmin-like 4 	ENST00000455616.1|SYTL4|ENSG00000102362.11|synaptotagmin-like 4 	ENST00000454200.2|SYTL4|ENSG00000102362.11|synaptotagmin-like 4 	ENST00000276141.6|SYTL4|ENSG00000102362.11|synaptotagmin-like 4
hg19_v2_chr10_-_61469837_61469837	0.0374652	AGUGCUU	ENST00000395348.3|SLC16A9|ENSG00000165449.7|solute carrier family 16, member 9
hg19_v2_chr14_+_57046500_57046529	0.0374438	AGUGCUU	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr13_-_25746416_25746433	0.037419	AGUGCUU	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr22_-_36236265_36236481	0.0373854	AGUGCUU	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr1_+_25071848_25071944	0.037317	AGUGCUU	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr17_+_56270084_56270098	0.0369767	AGUGCUU	ENST00000225371.5|EPX|ENSG00000121053.5|eosinophil peroxidase
hg19_v2_chr17_-_71088797_71088851	0.03694	AGUGCUU	ENST00000580557.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579732.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000578620.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000542342.2|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000255559.3|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579018.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11
hg19_v2_chr4_-_114900831_114900857	0.036716	AGUGCUU	ENST00000315366.7|ARSJ|ENSG00000180801.11|arylsulfatase family, member J
hg19_v2_chr1_+_93913713_93913839	0.0355612	AGUGCUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr10_+_98741041_98741041	0.0351757	AGUGCUU	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chr4_-_99851766_99851788	0.0345161	AGUGCUU	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr6_-_3457256_3457292	0.0340555	AGUGCUU	ENST00000436008.2|SLC22A23|ENSG00000137266.10|solute carrier family 22, member 23
hg19_v2_chr15_-_56535464_56535521	0.0337566	AGUGCUU	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr11_-_105892937_105893130	0.0336266	AGUGCUU	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr7_+_139044621_139044725	0.0331272	AGUGCUU	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr6_-_116381918_116381977	0.0331182	AGUGCUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chrX_+_77166172_77166261	0.033056	AGUGCUU	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr11_-_96076334_96076419	0.0328051	AGUGCUU	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chr9_+_19408999_19409057	0.0327548	AGUGCUU	ENST00000340967.2|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr1_-_70671216_70671303	0.0327046	AGUGCUU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr1_-_205601064_205601090	0.0326776	AGUGCUU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr7_+_104654623_104654669	0.0326583	AGUGCUU	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr10_-_73976025_73976074	0.0324743	AGUGCUU	ENST00000342444.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000533958.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000527593.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000394915.3|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000530461.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000317168.6|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000524829.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr20_+_56884752_56884799	0.0319441	AGUGCUU	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr16_-_3493528_3493542	0.0319208	AGUGCUU	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr5_-_32313019_32313081	0.0318951	AGUGCUU	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr2_-_105946491_105946491	0.0318458	AGUGCUU	ENST00000393359.2|TGFBRAP1|ENSG00000135966.8|transforming growth factor, beta receptor associated protein 1
hg19_v2_chr17_-_1083078_1083294	0.0317117	AGUGCUU	ENST00000574266.1|ABR|ENSG00000159842.10|active BCR-related 	ENST00000302538.5|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chrX_+_16737718_16737778	0.0315807	AGUGCUU	ENST00000380155.3|SYAP1|ENSG00000169895.5|synapse associated protein 1
hg19_v2_chr8_-_103668114_103668134	0.0312699	AGUGCUU	ENST00000285407.6|KLF10|ENSG00000155090.10|Kruppel-like factor 10
hg19_v2_chr2_+_26568965_26569025	0.0312472	AGUGCUU	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr11_+_64126614_64126665	0.0312455	AGUGCUU	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr5_+_170814803_170814885	0.0310561	AGUGCUU	ENST00000521672.1|NPM1|ENSG00000181163.9|nucleophosmin (nucleolar phosphoprotein B23, numatrin) 	ENST00000351986.6|NPM1|ENSG00000181163.9|nucleophosmin (nucleolar phosphoprotein B23, numatrin) 	ENST00000393820.2|NPM1|ENSG00000181163.9|nucleophosmin (nucleolar phosphoprotein B23, numatrin) 	ENST00000523622.1|NPM1|ENSG00000181163.9|nucleophosmin (nucleolar phosphoprotein B23, numatrin)
hg19_v2_chr1_-_150552006_150552093	0.0307046	AGUGCUU	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr1_+_97187318_97187380	0.0301688	AGUGCUU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr1_-_85156216_85156240	0.0301086	AGUGCUU	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr9_+_116638562_116638606	0.0298009	AGUGCUU	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr9_-_110251836_110251927	0.0294089	AGUGCUU	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr1_+_78245303_78245351	0.0288185	AGUGCUU	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr11_+_92085262_92085262	0.0286136	AGUGCUU	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr10_+_180987_181009	0.0285424	AGUGCUU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr22_-_41252962_41253026	0.0277652	AGUGCUU	ENST00000216218.3|ST13|ENSG00000100380.8|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
hg19_v2_chr2_+_170683942_170683972	0.027669	AGUGCUU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr17_-_2304365_2304412	0.0276485	AGUGCUU	ENST00000575394.1|MNT|ENSG00000070444.10|MAX network transcriptional repressor 	ENST00000174618.4|MNT|ENSG00000070444.10|MAX network transcriptional repressor
hg19_v2_chr1_+_26438289_26438352	0.0275822	AGUGCUU	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr12_-_95467356_95467479	0.0266867	AGUGCUU	ENST00000393101.3|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1 	ENST00000333003.5|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1
hg19_v2_chr3_-_53381539_53381654	0.025999	AGUGCUU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr2_+_27593389_27593503	0.0256827	AGUGCUU	ENST00000233575.2|SNX17|ENSG00000115234.6|sorting nexin 17 	ENST00000543024.1|SNX17|ENSG00000115234.6|sorting nexin 17 	ENST00000537606.1|SNX17|ENSG00000115234.6|sorting nexin 17
hg19_v2_chr17_+_46125707_46125746	0.0256038	AGUGCUU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr6_+_13615554_13615601	0.0255562	AGUGCUU	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr6_-_56707943_56708013	0.0253917	AGUGCUU	ENST00000370769.4|DST|ENSG00000151914.13|dystonin 	ENST00000421834.2|DST|ENSG00000151914.13|dystonin 	ENST00000312431.6|DST|ENSG00000151914.13|dystonin 	ENST00000361203.3|DST|ENSG00000151914.13|dystonin 	ENST00000523817.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr11_+_9406169_9406210	0.0247876	AGUGCUU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr3_+_152017181_152017229	0.024754	AGUGCUU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr3_+_42695176_42695201	0.0246774	AGUGCUU	ENST00000232974.6|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47 	ENST00000457842.3|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47
hg19_v2_chr12_+_56915713_56915746	0.024093	AGUGCUU	ENST00000262031.5|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2 	ENST00000552247.2|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2
hg19_v2_chr17_-_8868991_8869059	0.0240508	AGUGCUU	ENST00000447110.1|PIK3R5|ENSG00000141506.9|phosphoinositide-3-kinase, regulatory subunit 5
hg19_v2_chr17_-_62658186_62658231	0.0240202	AGUGCUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr13_-_27745936_27746033	0.0236035	AGUGCUU	ENST00000282344.6|USP12|ENSG00000152484.9|ubiquitin specific peptidase 12
hg19_v2_chrX_+_128674213_128674285	0.0235927	AGUGCUU	ENST00000371113.4|OCRL|ENSG00000122126.11|oculocerebrorenal syndrome of Lowe 	ENST00000357121.5|OCRL|ENSG00000122126.11|oculocerebrorenal syndrome of Lowe
hg19_v2_chr17_+_38333263_38333368	0.0234557	AGUGCUU	ENST00000456989.2|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000543876.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000544503.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000264644.6|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000538884.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1
hg19_v2_chr21_-_44846999_44847017	0.0234357	AGUGCUU	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr16_-_85722530_85722615	0.0232818	AGUGCUU	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr5_-_89825328_89825422	0.0228667	AGUGCUU	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr7_-_137686791_137686821	0.0228656	AGUGCUU	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr6_-_89827720_89827805	0.0227017	AGUGCUU	ENST00000452027.2|SRSF12|ENSG00000154548.8|serine/arginine-rich splicing factor 12
hg19_v2_chr19_+_33463127_33463195	0.0220247	AGUGCUU	ENST00000589646.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000588258.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000590179.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40
hg19_v2_chr13_+_52158610_52158654	0.0215781	AGUGCUU	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chr15_-_48937982_48938046	0.0215484	AGUGCUU	ENST00000316623.5|FBN1|ENSG00000166147.9|fibrillin 1
hg19_v2_chr2_-_11484710_11484812	0.0214235	AGUGCUU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr14_-_77965151_77965210	0.0212992	AGUGCUU	ENST00000393684.3|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000493585.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000554801.2|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000342219.4|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000412904.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000429906.1|ISM2|ENSG00000100593.13|isthmin 2
hg19_v2_chr3_+_126707437_126707437	0.0206682	AGUGCUU	ENST00000393409.2|PLXNA1|ENSG00000114554.7|plexin A1 	ENST00000251772.4|PLXNA1|ENSG00000114554.7|plexin A1
hg19_v2_chr22_-_38902325_38902347	0.020287	AGUGCUU	ENST00000396821.3|DDX17|ENSG00000100201.14|DEAD (Asp-Glu-Ala-Asp) box helicase 17 	ENST00000381633.3|DDX17|ENSG00000100201.14|DEAD (Asp-Glu-Ala-Asp) box helicase 17
hg19_v2_chr2_-_183903133_183903210	0.0198491	AGUGCUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr15_+_69706585_69706641	0.0197029	AGUGCUU	ENST00000559279.1|KIF23|ENSG00000137807.9|kinesin family member 23 	ENST00000395392.2|KIF23|ENSG00000137807.9|kinesin family member 23
hg19_v2_chr4_+_79697495_79697538	0.0195155	AGUGCUU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chrX_-_24045303_24045303	0.0191032	AGUGCUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr11_+_120894781_120894840	0.019012	AGUGCUU	ENST00000529397.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000528512.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000422003.2|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like
hg19_v2_chrX_+_24072833_24072907	0.0185284	AGUGCUU	ENST00000253039.4|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chrX_+_69664706_69664819	0.0181007	AGUGCUU	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr10_+_98592009_98592061	0.0179563	AGUGCUU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr5_+_176560742_176560926	0.0176899	AGUGCUU	ENST00000439151.2|NSD1|ENSG00000165671.14|nuclear receptor binding SET domain protein 1
hg19_v2_chr17_+_70117153_70117174	0.0172419	AGUGCUU	ENST00000245479.2|SOX9|ENSG00000125398.5|SRY (sex determining region Y)-box 9
hg19_v2_chr17_-_40897043_40897087	0.0170416	AGUGCUU	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr10_+_126630692_126630692	0.0168667	AGUGCUU	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr1_+_117602925_117602973	0.0168476	AGUGCUU	ENST00000369466.4|TTF2|ENSG00000116830.7|transcription termination factor, RNA polymerase II
hg19_v2_chr1_-_226076843_226076847	0.0167463	AGUGCUU	ENST00000272134.5|LEFTY1|ENSG00000243709.1|left-right determination factor 1
hg19_v2_chr22_-_30642728_30642754	0.0164282	AGUGCUU	ENST00000403987.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr12_-_49504655_49504686	0.0162975	AGUGCUU	ENST00000551782.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like 	ENST00000267102.8|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr9_+_5510492_5510552	0.0160028	AGUGCUU	ENST00000397745.2|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
hg19_v2_chr11_-_78052923_78052949	0.0159389	AGUGCUU	ENST00000340149.2|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr1_+_36396677_36396749	0.0157249	AGUGCUU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr2_-_86790593_86790614	0.0153303	AGUGCUU	ENST00000263856.4|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000409225.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3
hg19_v2_chr9_-_127952032_127952098	0.0151866	AGUGCUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr17_-_60142609_60142657	0.0151117	AGUGCUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr2_-_197457335_197457421	0.0151055	AGUGCUU	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr3_-_122233723_122233797	0.0148691	AGUGCUU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr10_+_102295616_102295713	0.0145749	AGUGCUU	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr2_-_85788605_85788632	0.0145674	AGUGCUU	ENST00000233838.4|GGCX|ENSG00000115486.7|gamma-glutamyl carboxylase
hg19_v2_chr7_-_102789629_102789685	0.014155	AGUGCUU	ENST00000417955.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000341533.4|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000425379.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D
hg19_v2_chr12_+_94542459_94542513	0.0141332	AGUGCUU	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr3_+_93781728_93781760	0.0140105	AGUGCUU	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr2_+_46524537_46524553	0.0139819	AGUGCUU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr5_+_142149955_142150000	0.0137991	AGUGCUU	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr5_-_133968529_133968678	0.0135232	AGUGCUU	ENST00000402673.2|SAR1B|ENSG00000152700.9|SAR1 homolog B (S. cerevisiae)
hg19_v2_chr2_-_86094764_86094796	0.0134938	AGUGCUU	ENST00000393808.3|ST3GAL5|ENSG00000115525.12|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v2_chr20_+_3776371_3776506	0.013315	AGUGCUU	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr2_+_139259324_139259389	0.0129675	AGUGCUU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr3_-_169899504_169899542	0.0128711	AGUGCUU	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr9_-_124989804_124989865	0.0128652	AGUGCUU	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr9_+_128509624_128509658	0.012633	AGUGCUU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr14_+_67826709_67826751	0.0124223	AGUGCUU	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr19_+_55851221_55851285	0.0124125	AGUGCUU	ENST00000255613.3|SUV420H2|ENSG00000133247.9|suppressor of variegation 4-20 homolog 2 (Drosophila) 	ENST00000539076.1|AC020922.1|ENSG00000267531.1|Uncharacterized protein
hg19_v2_chr1_+_178062855_178062903	0.0123779	AGUGCUU	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr12_+_107349497_107349578	0.0120939	AGUGCUU	ENST00000548125.1|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23 	ENST00000280756.4|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23
hg19_v2_chr15_+_92396920_92396987	0.0115786	AGUGCUU	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr13_-_26795840_26795995	0.0113281	AGUGCUU	ENST00000381570.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000399762.2|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000346166.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6
hg19_v2_chr1_-_156051789_156051838	0.011236	AGUGCUU	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr6_-_33168391_33168465	0.0110108	AGUGCUU	ENST00000374685.4|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000413614.2|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000374680.3|RXRB|ENSG00000204231.6|retinoid X receptor, beta
hg19_v2_chr10_+_70320413_70320413	0.0107474	AGUGCUU	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr3_-_114790179_114790222	0.0106305	AGUGCUU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chrX_-_62974941_62975031	0.00946118	AGUGCUU	ENST00000374872.1|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9 	ENST00000253401.6|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9 	ENST00000374870.4|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v2_chrX_+_110339439_110339605	0.0091846	AGUGCUU	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr1_-_182361327_182361345	0.00905091	AGUGCUU	ENST00000331872.6|GLUL|ENSG00000135821.12|glutamate-ammonia ligase 	ENST00000311223.5|GLUL|ENSG00000135821.12|glutamate-ammonia ligase
hg19_v2_chr19_+_54694119_54694214	0.00832915	AGUGCUU	ENST00000456872.1|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000302937.4|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000429671.2|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit
hg19_v2_chr1_+_184356188_184356200	0.00802589	AGUGCUU	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr2_-_25194963_25194976	0.00801194	AGUGCUU	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr4_+_74606223_74606293	0.00794632	AGUGCUU	ENST00000307407.3|IL8|ENSG00000169429.6|interleukin 8 	ENST00000401931.1|IL8|ENSG00000169429.6|interleukin 8
hg19_v2_chr6_-_99797522_99797572	0.00780427	AGUGCUU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr17_+_30677136_30677205	0.00744478	AGUGCUU	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr3_-_46037299_46037337	0.00709563	AGUGCUU	ENST00000296137.2|FYCO1|ENSG00000163820.10|FYVE and coiled-coil domain containing 1
hg19_v2_chr9_-_36400213_36400296	0.006819	AGUGCUU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr14_-_23504087_23504118	0.00671037	AGUGCUU	ENST00000493471.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5 	ENST00000460922.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr3_+_14989076_14989113	0.00638471	AGUGCUU	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr13_-_100624012_100624163	0.00626268	AGUGCUU	ENST00000267294.4|ZIC5|ENSG00000139800.8|Zic family member 5
hg19_v2_chr17_+_47074758_47074787	0.00623746	AGUGCUU	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr22_+_38302285_38302361	0.0062269	AGUGCUU	ENST00000215957.6|MICALL1|ENSG00000100139.9|MICAL-like 1
hg19_v2_chr16_-_1464688_1464752	0.00622531	AGUGCUU	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chrX_-_53449593_53449677	0.00612662	AGUGCUU	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr17_+_57642886_57643006	0.00597262	AGUGCUU	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr11_+_24518723_24518757	0.0059536	AGUGCUU	ENST00000336930.6|LUZP2|ENSG00000187398.7|leucine zipper protein 2 	ENST00000529015.1|LUZP2|ENSG00000187398.7|leucine zipper protein 2 	ENST00000533227.1|LUZP2|ENSG00000187398.7|leucine zipper protein 2
hg19_v2_chr7_-_6523755_6523873	0.00577466	AGUGCUU	ENST00000436575.1|DAGLB|ENSG00000164535.10|diacylglycerol lipase, beta 	ENST00000258739.4|KDELR2|ENSG00000136240.5|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
hg19_v2_chr17_-_35969409_35969544	0.0056631	AGUGCUU	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr10_+_115614370_115614436	0.0056481	AGUGCUU	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr13_-_79177673_79177701	0.00547177	AGUGCUU	ENST00000377208.5|POU4F1|ENSG00000152192.6|POU class 4 homeobox 1
hg19_v2_chr12_-_50101165_50101259	0.00525651	AGUGCUU	ENST00000352151.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000335154.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000293590.5|FMNL3|ENSG00000161791.9|formin-like 3
hg19_v2_chr14_-_68283291_68283323	0.00513645	AGUGCUU	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr8_+_67405438_67405450	0.00492844	AGUGCUU	ENST00000305454.3|C8orf46|ENSG00000169085.7|chromosome 8 open reading frame 46
hg19_v2_chr2_-_43453734_43453751	0.00469286	AGUGCUU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr11_-_129872712_129872755	0.00446131	AGUGCUU	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr1_-_39347255_39347303	0.00388699	AGUGCUU	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr9_-_16870704_16870841	0.003131	AGUGCUU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr16_+_69373323_69373371	0.00306238	AGUGCUU	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr1_+_67390578_67390698	0.00303819	AGUGCUU	ENST00000371018.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355977.6|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000357692.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000401041.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371016.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371014.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371012.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr15_-_45480153_45480171	0.00275053	AGUGCUU	ENST00000560471.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F 	ENST00000560540.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr3_+_119013185_119013306	0.00224272	AGUGCUU	ENST00000264245.4|ARHGAP31|ENSG00000031081.6|Rho GTPase activating protein 31
hg19_v2_chr10_-_75910789_75910821	0.0020607	AGUGCUU	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr3_+_23244780_23244837	0.00205372	AGUGCUU	ENST00000396703.1|UBE2E2|ENSG00000182247.5|ubiquitin-conjugating enzyme E2E 2
hg19_v2_chr4_+_100737954_100738014	0.00189658	AGUGCUU	ENST00000296414.7|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides 	ENST00000512369.1|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides
hg19_v2_chr4_-_42659102_42659161	0.00186115	AGUGCUU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr1_+_200708671_200708744	0.00179127	AGUGCUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr9_+_109625378_109625458	0.00165667	AGUGCUU	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr2_-_214014959_214015058	0.0016488	AGUGCUU	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr16_-_66785699_66785759	0.00128264	AGUGCUU	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr20_-_48099182_48099214	0.000914066	AGUGCUU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr8_-_109799793_109799844	0.000361184	AGUGCUU	ENST00000297459.3|TMEM74|ENSG00000164841.4|transmembrane protein 74
