hg19_v2_chr11_-_75062730_75062775	0.687483	AGCUGCC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr6_-_29527702_29527702	0.463194	AGCUGCC	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr22_-_39268308_39268319	0.442928	AGCUGCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr12_-_57443886_57443927	0.438193	AGCUGCC	ENST00000300119.3|MYO1A|ENSG00000166866.8|myosin IA
hg19_v2_chr10_-_99094458_99094500	0.428043	AGCUGCC	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr12_+_56473628_56473680	0.41127	AGCUGCC	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr22_-_42322795_42322822	0.407168	AGCUGCC	ENST00000291232.3|TNFRSF13C|ENSG00000159958.3|tumor necrosis factor receptor superfamily, member 13C
hg19_v2_chr20_+_33814457_33814506	0.381138	AGCUGCC	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr18_+_46065393_46065444	0.356708	AGCUGCC	ENST00000256413.3|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr1_-_63988846_63988908	0.327524	AGCUGCC	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chrX_+_123095155_123095179	0.319406	AGCUGCC	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr16_-_87525651_87525651	0.313816	AGCUGCC	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr15_-_45670924_45670991	0.307905	AGCUGCC	ENST00000396659.3|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr5_-_159739532_159739607	0.29809	AGCUGCC	ENST00000520748.1|CCNJL|ENSG00000135083.10|cyclin J-like 	ENST00000393977.3|CCNJL|ENSG00000135083.10|cyclin J-like 	ENST00000257536.7|CCNJL|ENSG00000135083.10|cyclin J-like
hg19_v2_chr10_+_99205959_99205981	0.296222	AGCUGCC	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr8_+_17354587_17354610	0.290091	AGCUGCC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr19_+_49468558_49468567	0.286965	AGCUGCC	ENST00000331825.6|FTL|ENSG00000087086.9|ferritin, light polypeptide
hg19_v2_chr10_-_118032697_118032796	0.283114	AGCUGCC	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr9_+_116638562_116638606	0.277555	AGCUGCC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr1_-_15911510_15911605	0.267702	AGCUGCC	ENST00000375826.3|AGMAT|ENSG00000116771.5|agmatine ureohydrolase (agmatinase)
hg19_v2_chr1_-_70671216_70671303	0.247936	AGCUGCC	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr15_-_37390482_37390572	0.24484	AGCUGCC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr6_-_43478239_43478424	0.239751	AGCUGCC	ENST00000372441.1|LRRC73|ENSG00000204052.4|leucine rich repeat containing 73
hg19_v2_chr20_-_39995467_39995482	0.238794	AGCUGCC	ENST00000332312.3|EMILIN3|ENSG00000183798.4|elastin microfibril interfacer 3
hg19_v2_chr6_+_35995488_35995528	0.237233	AGCUGCC	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chr1_+_2985760_2985775	0.228258	AGCUGCC	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr4_+_106816592_106816608	0.224556	AGCUGCC	ENST00000379987.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000453617.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000427316.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000514622.1|NPNT|ENSG00000168743.8|nephronectin 	ENST00000305572.8|NPNT|ENSG00000168743.8|nephronectin
hg19_v2_chr21_+_40177143_40177231	0.220061	AGCUGCC	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr14_+_70078303_70078321	0.217743	AGCUGCC	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr1_+_86046433_86046453	0.21003	AGCUGCC	ENST00000451137.2|CYR61|ENSG00000142871.11|cysteine-rich, angiogenic inducer, 61
hg19_v2_chr1_-_204329013_204329086	0.209197	AGCUGCC	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr1_-_155211017_155211062	0.206121	AGCUGCC	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr8_+_98656336_98656535	0.200879	AGCUGCC	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr15_+_41851211_41851232	0.191525	AGCUGCC	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr4_-_53525406_53525502	0.186932	AGCUGCC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr1_-_17766198_17766232	0.184333	AGCUGCC	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr11_-_27528301_27528336	0.183109	AGCUGCC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr1_+_12227035_12227060	0.181376	AGCUGCC	ENST00000376259.3|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B 	ENST00000536782.1|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B
hg19_v2_chr1_-_11863171_11863302	0.178446	AGCUGCC	ENST00000376592.1|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr8_-_95961578_95961639	0.176466	AGCUGCC	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr5_-_142783175_142783297	0.175904	AGCUGCC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr5_+_137673945_137673961	0.17506	AGCUGCC	ENST00000513056.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C 	ENST00000511276.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr5_+_176784837_176784936	0.168607	AGCUGCC	ENST00000408923.3|RGS14|ENSG00000169220.13|regulator of G-protein signaling 14
hg19_v2_chr14_-_23288930_23289020	0.166208	AGCUGCC	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr1_+_154377669_154377699	0.16567	AGCUGCC	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr6_+_117996621_117996665	0.164059	AGCUGCC	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr3_+_187930719_187930729	0.150402	AGCUGCC	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_+_145524891_145525012	0.150324	AGCUGCC	ENST00000369304.3|ITGA10|ENSG00000143127.8|integrin, alpha 10
hg19_v2_chr6_-_110500905_110500921	0.144403	AGCUGCC	ENST00000392587.2|WASF1|ENSG00000112290.8|WAS protein family, member 1
hg19_v2_chr15_-_34502278_34502318	0.143909	AGCUGCC	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr2_-_127864577_127864688	0.14047	AGCUGCC	ENST00000376113.2|BIN1|ENSG00000136717.10|bridging integrator 1
hg19_v2_chr17_-_3749515_3749551	0.139622	AGCUGCC	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr10_+_89622870_89622870	0.139361	AGCUGCC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr5_+_139927213_139927271	0.136928	AGCUGCC	ENST00000310331.2|EIF4EBP3|ENSG00000243056.1|eukaryotic translation initiation factor 4E binding protein 3
hg19_v2_chrX_+_131157290_131157309	0.131435	AGCUGCC	ENST00000394334.2|MST4|ENSG00000134602.11|Serine/threonine-protein kinase MST4
hg19_v2_chr2_-_166651191_166651213	0.129122	AGCUGCC	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr4_-_111119804_111119832	0.126045	AGCUGCC	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr7_-_11871815_11871831	0.120833	AGCUGCC	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr7_+_20370746_20370778	0.120156	AGCUGCC	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr12_-_53893399_53893478	0.117532	AGCUGCC	ENST00000267079.2|MAP3K12|ENSG00000139625.8|mitogen-activated protein kinase kinase kinase 12
hg19_v2_chr7_+_73703728_73703807	0.116644	AGCUGCC	ENST00000361545.5|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2 	ENST00000223398.6|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2
hg19_v2_chr12_+_93771659_93771710	0.116379	AGCUGCC	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr5_+_77656339_77656362	0.116316	AGCUGCC	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr12_+_85673868_85673885	0.115049	AGCUGCC	ENST00000316824.3|ALX1|ENSG00000180318.3|ALX homeobox 1
hg19_v2_chr10_+_69644404_69644427	0.113666	AGCUGCC	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr8_+_41435696_41435734	0.113375	AGCUGCC	ENST00000396987.3|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6 	ENST00000519853.1|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6
hg19_v2_chr17_-_74449252_74449294	0.111568	AGCUGCC	ENST00000319380.7|UBE2O|ENSG00000175931.8|ubiquitin-conjugating enzyme E2O
hg19_v2_chr19_+_54705025_54705034	0.110371	AGCUGCC	ENST00000441429.1|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr22_+_41777927_41777971	0.108727	AGCUGCC	ENST00000266304.4|TEF|ENSG00000167074.10|thyrotrophic embryonic factor
hg19_v2_chr10_+_116697946_116698013	0.107146	AGCUGCC	ENST00000298746.3|TRUB1|ENSG00000165832.4|TruB pseudouridine (psi) synthase family member 1
hg19_v2_chr11_+_58346584_58346607	0.107141	AGCUGCC	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr16_+_10971037_10971076	0.105943	AGCUGCC	ENST00000324288.8|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator 	ENST00000381835.5|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator
hg19_v2_chr7_-_79082867_79082900	0.105472	AGCUGCC	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr1_+_203444887_203444975	0.104203	AGCUGCC	ENST00000343110.2|PRELP|ENSG00000188783.5|proline/arginine-rich end leucine-rich repeat protein
hg19_v2_chr2_-_43453734_43453751	0.103994	AGCUGCC	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr12_+_53574464_53574539	0.103574	AGCUGCC	ENST00000416904.3|ZNF740|ENSG00000139651.9|zinc finger protein 740
hg19_v2_chr17_-_19771216_19771230	0.102798	AGCUGCC	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr2_-_32264850_32264901	0.102259	AGCUGCC	ENST00000295066.3|DPY30|ENSG00000162961.9|dpy-30 homolog (C. elegans) 	ENST00000342166.5|DPY30|ENSG00000162961.9|dpy-30 homolog (C. elegans)
hg19_v2_chr3_-_194393206_194393206	0.10182	AGCUGCC	ENST00000265245.5|LSG1|ENSG00000041802.6|large 60S subunit nuclear export GTPase 1
hg19_v2_chr14_-_57735528_57735726	0.101775	AGCUGCC	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr10_+_92980517_92980550	0.101437	AGCUGCC	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr11_+_46740730_46740859	0.0997781	AGCUGCC	ENST00000311907.5|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000530231.1|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000442468.1|F2|ENSG00000180210.10|coagulation factor II (thrombin)
hg19_v2_chr1_+_231297798_231297858	0.0973139	AGCUGCC	ENST00000444294.3|TRIM67|ENSG00000119283.11|tripartite motif containing 67
hg19_v2_chr5_+_134181625_134181713	0.0965244	AGCUGCC	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr22_+_40573921_40573946	0.0964371	AGCUGCC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr12_+_52306113_52306194	0.0947752	AGCUGCC	ENST00000547400.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000550683.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000419526.2|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1
hg19_v2_chr11_+_120207787_120207962	0.0937188	AGCUGCC	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr12_+_56401268_56401443	0.0930413	AGCUGCC	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr7_+_128577972_128578047	0.0925812	AGCUGCC	ENST00000357234.5|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000477535.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000479582.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000464557.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000402030.2|IRF5|ENSG00000128604.14|interferon regulatory factor 5
hg19_v2_chr10_+_72238517_72238595	0.0924024	AGCUGCC	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr17_+_38219063_38219154	0.0922958	AGCUGCC	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr11_-_118966167_118966182	0.0886491	AGCUGCC	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr9_+_125133315_125133359	0.086834	AGCUGCC	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr7_-_93204033_93204043	0.0858127	AGCUGCC	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr15_-_74988281_74988392	0.0853516	AGCUGCC	ENST00000566828.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000563009.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000568176.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566243.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566219.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000426797.3|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566119.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000315127.4|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3
hg19_v2_chr1_+_35734562_35734573	0.0842169	AGCUGCC	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr1_+_26438289_26438352	0.0837579	AGCUGCC	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr22_-_30901637_30901705	0.0824346	AGCUGCC	ENST00000381982.3|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000255858.7|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000540456.1|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000392772.2|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae)
hg19_v2_chr20_-_43438912_43439165	0.0819266	AGCUGCC	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr7_-_6312206_6312308	0.0814755	AGCUGCC	ENST00000350796.3|CYTH3|ENSG00000008256.11|cytohesin 3
hg19_v2_chr7_+_30323923_30324060	0.0786046	AGCUGCC	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr2_+_232651124_232651176	0.0784	AGCUGCC	ENST00000350033.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000412591.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000410017.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000373608.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B
hg19_v2_chr1_+_38259540_38259569	0.0777585	AGCUGCC	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr9_+_114659046_114659102	0.0773572	AGCUGCC	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr9_+_116207007_116207012	0.0773096	AGCUGCC	ENST00000374140.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr15_-_75871589_75871676	0.0754368	AGCUGCC	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr2_+_208394616_208394655	0.0753645	AGCUGCC	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr1_-_115259337_115259515	0.0751231	AGCUGCC	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr10_-_13390270_13390316	0.0737828	AGCUGCC	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr16_+_53088885_53088961	0.0733676	AGCUGCC	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr9_+_101867359_101867376	0.0732529	AGCUGCC	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr22_-_47134077_47134216	0.0721299	AGCUGCC	ENST00000541677.1|CERK|ENSG00000100422.9|ceramide kinase 	ENST00000216264.8|CERK|ENSG00000100422.9|ceramide kinase
hg19_v2_chr5_-_100238956_100238994	0.0697631	AGCUGCC	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr22_-_22221900_22221970	0.0684746	AGCUGCC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr2_+_26987111_26987210	0.0677108	AGCUGCC	ENST00000344420.5|SLC35F6|ENSG00000213699.4|solute carrier family 35, member F6 	ENST00000416475.2|SLC35F6|ENSG00000213699.4|solute carrier family 35, member F6
hg19_v2_chr4_+_20702059_20702104	0.0671961	AGCUGCC	ENST00000444671.2|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000510700.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000506745.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514663.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509469.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000515339.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513861.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502374.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000538990.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000504630.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513590.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514292.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502938.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509625.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000505160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000507634.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513459.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511089.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chr3_+_101292939_101293063	0.0645091	AGCUGCC	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr9_-_95166841_95166867	0.0641955	AGCUGCC	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr20_-_3767324_3767443	0.061524	AGCUGCC	ENST00000379751.4|CENPB|ENSG00000125817.7|centromere protein B, 80kDa
hg19_v2_chr1_+_45965725_45965880	0.0608905	AGCUGCC	ENST00000401061.4|MMACHC|ENSG00000132763.10|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
hg19_v2_chr17_-_7590745_7590856	0.0607006	AGCUGCC	ENST00000514944.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000503591.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000455263.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000420246.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000445888.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000509690.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000604348.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000269305.4|TP53|ENSG00000141510.11|tumor protein p53
hg19_v2_chr12_-_6809958_6809996	0.0595172	AGCUGCC	ENST00000320591.5|PIANP|ENSG00000139200.9|PILR alpha associated neural protein 	ENST00000534837.1|PIANP|ENSG00000139200.9|PILR alpha associated neural protein
hg19_v2_chr5_-_127873659_127873735	0.058543	AGCUGCC	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr17_-_36956155_36956223	0.0576183	AGCUGCC	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chrX_+_109246285_109246352	0.0567039	AGCUGCC	ENST00000372073.1|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000372068.2|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000288381.4|TMEM164|ENSG00000157600.7|transmembrane protein 164
hg19_v2_chr17_-_4890919_4890985	0.0566765	AGCUGCC	ENST00000572543.1|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000381311.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000348066.3|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000358183.4|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chr11_+_64948665_64948748	0.0566035	AGCUGCC	ENST00000533820.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr6_+_96463840_96463892	0.0560657	AGCUGCC	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr11_-_95657231_95657459	0.0548651	AGCUGCC	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr17_+_42836329_42836399	0.0548637	AGCUGCC	ENST00000200557.6|ADAM11|ENSG00000073670.9|ADAM metallopeptidase domain 11
hg19_v2_chr1_-_39339777_39339777	0.0540895	AGCUGCC	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr1_-_205912577_205912593	0.0534805	AGCUGCC	ENST00000367135.3|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9 	ENST00000367134.2|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr14_-_78083112_78083140	0.053251	AGCUGCC	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr1_-_156051789_156051838	0.0521128	AGCUGCC	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr10_-_88281494_88281572	0.0509167	AGCUGCC	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr3_-_48885228_48885327	0.0504885	AGCUGCC	ENST00000454963.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000296446.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000419216.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000265563.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha
hg19_v2_chr5_-_177580777_177580830	0.0501637	AGCUGCC	ENST00000314397.4|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr5_+_139781445_139781506	0.0496958	AGCUGCC	ENST00000532219.1|ANKHD1-EIF4EBP3|ENSG00000254996.1|ANKHD1-EIF4EBP3 readthrough 	ENST00000394722.3|ANKHD1|ENSG00000131503.16|ankyrin repeat and KH domain containing 1
hg19_v2_chr16_+_31085714_31085783	0.0490031	AGCUGCC	ENST00000300850.5|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000564189.1|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000428260.1|ZNF646|ENSG00000167395.10|zinc finger protein 646
hg19_v2_chr1_-_28415204_28415227	0.0487456	AGCUGCC	ENST00000373871.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr11_+_65479462_65479517	0.0484757	AGCUGCC	ENST00000377046.3|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000352980.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000341318.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5
hg19_v2_chr14_+_53196872_53196959	0.0484023	AGCUGCC	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr1_-_39347255_39347303	0.0480328	AGCUGCC	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr1_+_184356188_184356200	0.0454535	AGCUGCC	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr11_-_118122996_118123090	0.0454012	AGCUGCC	ENST00000525386.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000527472.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000278949.4|MPZL3|ENSG00000160588.5|myelin protein zero-like 3
hg19_v2_chr12_-_56652111_56652183	0.0445696	AGCUGCC	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr14_+_55738021_55738176	0.0444319	AGCUGCC	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr8_-_81787006_81787031	0.0435955	AGCUGCC	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr1_-_213189108_213189154	0.0421954	AGCUGCC	ENST00000535388.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr10_-_105615164_105615323	0.0407206	AGCUGCC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr19_+_709101_709131	0.0405371	AGCUGCC	ENST00000338448.5|PALM|ENSG00000099864.13|paralemmin
hg19_v2_chr1_-_113249948_113250056	0.0397166	AGCUGCC	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr12_+_48166978_48167047	0.0390153	AGCUGCC	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr1_-_204380919_204380953	0.0382207	AGCUGCC	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr2_+_85766280_85766299	0.0372238	AGCUGCC	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr4_-_142053952_142053996	0.0369549	AGCUGCC	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr1_+_27561007_27561061	0.0364657	AGCUGCC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr2_+_74425689_74425749	0.0354982	AGCUGCC	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr1_-_119683251_119683298	0.0354961	AGCUGCC	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr4_-_39979576_39979588	0.0335036	AGCUGCC	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr20_-_48184638_48184694	0.0332024	AGCUGCC	ENST00000244043.4|PTGIS|ENSG00000124212.5|prostaglandin I2 (prostacyclin) synthase
hg19_v2_chr12_-_86230315_86230348	0.0329295	AGCUGCC	ENST00000361228.3|RASSF9|ENSG00000198774.3|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
hg19_v2_chr22_+_26879817_26879896	0.0327395	AGCUGCC	ENST00000215917.7|SRRD|ENSG00000100104.8|SRR1 domain containing
hg19_v2_chr5_+_56469775_56469837	0.0320452	AGCUGCC	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr19_-_5680231_5680277	0.0314859	AGCUGCC	ENST00000587950.1|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr3_-_57199397_57199432	0.0300093	AGCUGCC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr17_-_40075219_40075275	0.0297792	AGCUGCC	ENST00000537919.1|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000352035.2|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000353196.1|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000393896.2|ACLY|ENSG00000131473.12|ATP citrate lyase
hg19_v2_chr12_+_9067327_9067378	0.0288462	AGCUGCC	ENST00000433083.2|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000544916.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000544539.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000539063.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila)
hg19_v2_chr9_+_34990219_34990312	0.0288261	AGCUGCC	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr1_+_93544791_93544807	0.0274922	AGCUGCC	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr1_-_27481401_27481401	0.0274539	AGCUGCC	ENST00000263980.3|SLC9A1|ENSG00000090020.6|solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
hg19_v2_chr10_-_75634260_75634321	0.0267359	AGCUGCC	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr16_+_27561449_27561481	0.0263504	AGCUGCC	ENST00000261588.4|KIAA0556|ENSG00000047578.8|KIAA0556
hg19_v2_chr4_+_184826418_184826522	0.0262376	AGCUGCC	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr9_-_19786926_19786926	0.0260647	AGCUGCC	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr1_+_16693578_16693760	0.0260146	AGCUGCC	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr11_+_117014983_117015017	0.0258595	AGCUGCC	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr20_-_31071239_31071307	0.0251518	AGCUGCC	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr8_+_35649365_35649365	0.025145	AGCUGCC	ENST00000437887.1|AC012215.1|ENSG00000233863.1|Uncharacterized protein
hg19_v2_chr4_-_87281224_87281375	0.0246691	AGCUGCC	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr21_-_45660723_45660831	0.0237874	AGCUGCC	ENST00000344330.4|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand 	ENST00000407780.3|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand 	ENST00000400379.3|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand
hg19_v2_chr17_-_78009647_78009681	0.0234012	AGCUGCC	ENST00000310924.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr2_-_25194963_25194976	0.0233115	AGCUGCC	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr6_+_71377473_71377520	0.0230945	AGCUGCC	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr5_+_149109825_149109907	0.0227164	AGCUGCC	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr16_+_30710462_30710498	0.0225891	AGCUGCC	ENST00000262518.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000395059.2|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000344771.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein
hg19_v2_chr2_+_178077477_178077525	0.0214741	AGCUGCC	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr10_-_3827417_3827473	0.0213885	AGCUGCC	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr15_+_68570062_68570147	0.0205727	AGCUGCC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr17_-_617949_618107	0.0203853	AGCUGCC	ENST00000401468.3|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000574029.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000291074.5|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000571805.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000437048.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000446250.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae)
hg19_v2_chr1_-_86174065_86174134	0.0191339	AGCUGCC	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr15_+_57668695_57668734	0.0181101	AGCUGCC	ENST00000281282.5|CGNL1|ENSG00000128849.9|cingulin-like 1
hg19_v2_chrX_+_108780062_108780105	0.0170276	AGCUGCC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr20_-_3185279_3185343	0.0169058	AGCUGCC	ENST00000354488.3|DDRGK1|ENSG00000198171.8|DDRGK domain containing 1 	ENST00000380201.2|DDRGK1|ENSG00000198171.8|DDRGK domain containing 1
hg19_v2_chr12_-_50101165_50101259	0.016708	AGCUGCC	ENST00000352151.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000335154.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000293590.5|FMNL3|ENSG00000161791.9|formin-like 3
hg19_v2_chr6_+_131148538_131148554	0.0160733	AGCUGCC	ENST00000541421.2|SMLR1|ENSG00000256162.2|small leucine-rich protein 1
hg19_v2_chr19_-_344786_344826	0.0153515	AGCUGCC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr3_-_49823941_49823990	0.0152451	AGCUGCC	ENST00000321599.4|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000395238.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000468463.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000460540.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1
hg19_v2_chr3_-_50649192_50649262	0.0150243	AGCUGCC	ENST00000443053.2|CISH|ENSG00000114737.11|cytokine inducible SH2-containing protein 	ENST00000348721.3|CISH|ENSG00000114737.11|cytokine inducible SH2-containing protein
hg19_v2_chr15_-_50978965_50979012	0.0150145	AGCUGCC	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr7_-_16505440_16505474	0.0147767	AGCUGCC	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr16_+_30669720_30669771	0.01476	AGCUGCC	ENST00000356166.6|FBRS|ENSG00000156860.11|fibrosin
hg19_v2_chr20_+_19997948_19998034	0.0144871	AGCUGCC	ENST00000310450.4|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENST00000398602.2|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit
hg19_v2_chr19_+_34745442_34745502	0.0142256	AGCUGCC	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr9_-_14314066_14314075	0.0139307	AGCUGCC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr9_-_132404374_132404450	0.0132271	AGCUGCC	ENST00000277459.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000450050.2|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000277458.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6
hg19_v2_chr8_-_130951940_130952118	0.013145	AGCUGCC	ENST00000522250.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522941.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522746.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520204.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519070.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520254.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519824.2|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519540.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B
hg19_v2_chr16_+_30006615_30006683	0.0128241	AGCUGCC	ENST00000563197.1|INO80E|ENSG00000169592.10|INO80 complex subunit E
hg19_v2_chr12_+_49372251_49372398	0.0125569	AGCUGCC	ENST00000293549.3|WNT1|ENSG00000125084.7|wingless-type MMTV integration site family, member 1
hg19_v2_chr9_-_117568365_117568406	0.0119324	AGCUGCC	ENST00000374045.4|TNFSF15|ENSG00000181634.7|tumor necrosis factor (ligand) superfamily, member 15
hg19_v2_chr6_+_24495067_24495096	0.0117524	AGCUGCC	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr8_+_103876528_103876594	0.0116979	AGCUGCC	ENST00000522939.1|KB-1507C5.2|ENSG00000253320.1|HCG15011, isoform CRA_a; Protein LOC100996457  	ENST00000524007.1|KB-1507C5.2|ENSG00000253320.1|HCG15011, isoform CRA_a; Protein LOC100996457
hg19_v2_chr6_-_152958521_152958549	0.0115888	AGCUGCC	ENST00000367255.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000265368.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000448038.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000341594.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr1_+_214161272_214161322	0.0109668	AGCUGCC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr4_+_41937131_41937211	0.0104949	AGCUGCC	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr15_-_42749711_42749754	0.0103151	AGCUGCC	ENST00000565611.1|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000263805.4|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000565948.1|ZNF106|ENSG00000103994.12|zinc finger protein 106
hg19_v2_chr21_-_35831880_35831902	0.0102264	AGCUGCC	ENST00000399289.3|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1 	ENST00000432085.1|KCNE1|ENSG00000180509.7|potassium voltage-gated channel, Isk-related family, member 1
hg19_v2_chr1_+_114472222_114472377	0.00951514	AGCUGCC	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr17_-_43487780_43487792	0.00817694	AGCUGCC	ENST00000532038.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27 	ENST00000528677.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27
hg19_v2_chr2_-_230933709_230933720	0.00799671	AGCUGCC	ENST00000436869.1|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14 	ENST00000295190.4|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14
hg19_v2_chrX_-_108868390_108868407	0.00781291	AGCUGCC	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr7_+_39989611_39989716	0.00778312	AGCUGCC	ENST00000181839.4|CDK13|ENSG00000065883.10|cyclin-dependent kinase 13
hg19_v2_chr1_+_181003067_181003149	0.0073474	AGCUGCC	ENST00000434571.2|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367579.3|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000282990.6|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367580.5|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related
hg19_v2_chr2_-_225450013_225450068	0.00714533	AGCUGCC	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr8_-_41909496_41909512	0.00710414	AGCUGCC	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr10_+_93558069_93558154	0.00683606	AGCUGCC	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr21_-_36260980_36261011	0.0060481	AGCUGCC	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr1_-_162381907_162381939	0.00597776	AGCUGCC	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr2_-_219433014_219433100	0.00590832	AGCUGCC	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr8_+_1449532_1449532	0.00534223	AGCUGCC	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr1_-_19283163_19283180	0.0050982	AGCUGCC	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr14_+_77228532_77228672	0.00492947	AGCUGCC	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chr16_+_66400533_66400545	0.00445027	AGCUGCC	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr12_+_62860581_62860629	0.00403806	AGCUGCC	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr13_-_28545276_28545276	0.0039516	AGCUGCC	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr17_-_40897043_40897087	0.00361356	AGCUGCC	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr2_+_166326157_166326216	0.00358953	AGCUGCC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr15_+_52121822_52121833	0.0035339	AGCUGCC	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr15_+_51633826_51633858	0.00318133	AGCUGCC	ENST00000335449.6|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr10_+_5454505_5454540	0.00304798	AGCUGCC	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr17_+_34058639_34058724	0.0030127	AGCUGCC	ENST00000268864.3|RASL10B|ENSG00000141150.3|RAS-like, family 10, member B
hg19_v2_chr7_-_44621777_44621863	0.00131068	AGCUGCC	ENST00000481238.1|TMED4|ENSG00000158604.10|transmembrane emp24 protein transport domain containing 4 	ENST00000457408.2|TMED4|ENSG00000158604.10|transmembrane emp24 protein transport domain containing 4
