hg19_v2_chr17_+_68165657_68165688	1.44196	AAUGCCC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr2_+_155554797_155554837	0.557432	AAUGCCC	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr2_-_153574480_153574552	0.220918	AAUGCCC	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr15_+_52121822_52121833	0.215695	AAUGCCC	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr3_+_51575596_51575596	0.183267	AAUGCCC	ENST00000409535.2|RAD54L2|ENSG00000164080.9|RAD54-like 2 (S. cerevisiae)
hg19_v2_chr2_+_46926048_46926095	0.177303	AAUGCCC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr2_-_64881018_64881064	0.163991	AAUGCCC	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr5_-_39074479_39074515	0.161399	AAUGCCC	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr5_-_142065612_142065638	0.155805	AAUGCCC	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr8_-_82598511_82598570	0.15085	AAUGCCC	ENST00000449740.2|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000311489.4|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000521360.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000519964.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1 	ENST00000518202.1|IMPA1|ENSG00000133731.5|inositol(myo)-1(or 4)-monophosphatase 1
hg19_v2_chr3_+_23986748_23986761	0.146824	AAUGCCC	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr2_+_61108650_61108687	0.118699	AAUGCCC	ENST00000295025.8|REL|ENSG00000162924.9|v-rel avian reticuloendotheliosis viral oncogene homolog
hg19_v2_chr2_-_200322723_200322819	0.118415	AAUGCCC	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr8_+_67579807_67579887	0.11728	AAUGCCC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr1_-_244013384_244013430	0.116767	AAUGCCC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr5_-_90679145_90679176	0.115883	AAUGCCC	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr1_-_78225482_78225544	0.115155	AAUGCCC	ENST00000524778.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370794.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370793.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370792.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33
hg19_v2_chr1_+_2160134_2160134	0.114735	AAUGCCC	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr20_+_56884752_56884799	0.101203	AAUGCCC	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr2_-_180129484_180129574	0.100515	AAUGCCC	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr2_+_179345173_179345221	0.0940298	AAUGCCC	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr5_+_172483347_172483407	0.0927775	AAUGCCC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr1_+_97187318_97187380	0.0914112	AAUGCCC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr2_-_183903133_183903210	0.090656	AAUGCCC	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr1_-_22109682_22109719	0.0906006	AAUGCCC	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr8_-_38239732_38239796	0.090056	AAUGCCC	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr15_+_68346501_68346550	0.0896571	AAUGCCC	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr3_-_123603137_123603203	0.0884349	AAUGCCC	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr4_-_11431389_11431389	0.0863418	AAUGCCC	ENST00000002596.5|HS3ST1|ENSG00000002587.5|heparan sulfate (glucosamine) 3-O-sulfotransferase 1
hg19_v2_chr8_+_124780672_124780764	0.0862261	AAUGCCC	ENST00000521166.1|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1 	ENST00000334705.7|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1
hg19_v2_chr7_-_151217001_151217019	0.082342	AAUGCCC	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr10_-_105615164_105615323	0.0790276	AAUGCCC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr4_-_103748880_103749047	0.0787723	AAUGCCC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr12_-_75905374_75905420	0.077427	AAUGCCC	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr3_-_113465065_113465147	0.0752772	AAUGCCC	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr4_+_38665810_38665827	0.0734401	AAUGCCC	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr13_-_21476900_21476949	0.0705022	AAUGCCC	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr10_-_98346801_98346812	0.0692976	AAUGCCC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr10_-_62149433_62149488	0.0656425	AAUGCCC	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr8_+_128426535_128426535	0.0656246	AAUGCCC	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr11_-_57283159_57283259	0.0656213	AAUGCCC	ENST00000533263.1|SLC43A1|ENSG00000149150.4|solute carrier family 43 (amino acid system L transporter), member 1 	ENST00000278426.3|SLC43A1|ENSG00000149150.4|solute carrier family 43 (amino acid system L transporter), member 1
hg19_v2_chr3_+_171758344_171758358	0.063949	AAUGCCC	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr12_-_31479045_31479074	0.0628105	AAUGCCC	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr5_-_142783175_142783297	0.0618731	AAUGCCC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr22_+_32340481_32340510	0.0609972	AAUGCCC	ENST00000397492.1|YWHAH|ENSG00000128245.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
hg19_v2_chr7_+_94285637_94285689	0.0609107	AAUGCCC	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr1_-_28415204_28415227	0.0603653	AAUGCCC	ENST00000373871.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr5_-_89825328_89825422	0.0599465	AAUGCCC	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr10_+_89622870_89622870	0.0560386	AAUGCCC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chrX_-_19988382_19988416	0.0556573	AAUGCCC	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr11_+_34642656_34642682	0.0538252	AAUGCCC	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr2_-_157189180_157189290	0.0534677	AAUGCCC	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr7_+_139044621_139044725	0.0525267	AAUGCCC	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr15_+_96873921_96873946	0.0505743	AAUGCCC	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr5_+_122181184_122181213	0.0490126	AAUGCCC	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr18_+_56338618_56338656	0.0488644	AAUGCCC	ENST00000348428.3|MALT1|ENSG00000172175.8|mucosa associated lymphoid tissue lymphoma translocation gene 1
hg19_v2_chr2_-_190649082_190649102	0.0487985	AAUGCCC	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
hg19_v2_chr8_+_59323823_59323947	0.048759	AAUGCCC	ENST00000399598.2|UBXN2B|ENSG00000215114.3|UBX domain protein 2B
hg19_v2_chr8_+_54764346_54764460	0.0483389	AAUGCCC	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chr3_-_48885228_48885327	0.0474236	AAUGCCC	ENST00000454963.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000296446.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000419216.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000265563.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha
hg19_v2_chr4_+_41992489_41992561	0.0470954	AAUGCCC	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr12_+_72666407_72666463	0.0455288	AAUGCCC	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr3_+_101292939_101293063	0.0452621	AAUGCCC	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr3_+_38495333_38495422	0.0452461	AAUGCCC	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr2_-_39348137_39348212	0.045161	AAUGCCC	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr6_+_16129308_16129402	0.0447198	AAUGCCC	ENST00000356840.3|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein 	ENST00000349606.4|MYLIP|ENSG00000007944.10|myosin regulatory light chain interacting protein
hg19_v2_chr7_+_138145076_138145116	0.0446031	AAUGCCC	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr3_-_79068594_79068627	0.0437352	AAUGCCC	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr9_-_6007787_6007957	0.0430451	AAUGCCC	ENST00000399933.3|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000381461.2|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000513355.2|KIAA2026|ENSG00000183354.7|KIAA2026
hg19_v2_chr10_+_22610124_22610188	0.0426571	AAUGCCC	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr9_+_116638562_116638606	0.0423363	AAUGCCC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr12_-_67072714_67072925	0.0423231	AAUGCCC	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr1_-_91487013_91487070	0.0415918	AAUGCCC	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr15_+_41523335_41523350	0.0407209	AAUGCCC	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr10_+_180987_181009	0.039361	AAUGCCC	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr1_-_155881156_155881210	0.0382678	AAUGCCC	ENST00000539040.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368323.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chr5_-_59189545_59189625	0.0372102	AAUGCCC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr13_+_114238997_114239077	0.0364088	AAUGCCC	ENST00000538138.1|TFDP1|ENSG00000198176.8|transcription factor Dp-1 	ENST00000375370.5|TFDP1|ENSG00000198176.8|transcription factor Dp-1
hg19_v2_chr1_+_29063271_29063283	0.0354798	AAUGCCC	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr11_-_31839488_31839515	0.0349747	AAUGCCC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr9_-_136933134_136933154	0.0346618	AAUGCCC	ENST00000303407.7|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr2_+_192542850_192542872	0.0345691	AAUGCCC	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr12_+_68042495_68042508	0.0333678	AAUGCCC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr1_-_153588334_153588414	0.0332185	AAUGCCC	ENST00000476873.1|S100A14|ENSG00000189334.4|S100 calcium binding protein A14
hg19_v2_chr1_-_35658736_35658754	0.0315801	AAUGCCC	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr14_-_23526739_23526766	0.0308202	AAUGCCC	ENST00000397359.3|CDH24|ENSG00000139880.15|cadherin 24, type 2 	ENST00000487137.2|CDH24|ENSG00000139880.15|cadherin 24, type 2
hg19_v2_chr4_-_74124502_74124523	0.0306095	AAUGCCC	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr18_+_43753974_43754019	0.0301948	AAUGCCC	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr10_-_120101804_120101843	0.0301863	AAUGCCC	ENST00000369183.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A 	ENST00000369172.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A
hg19_v2_chr3_-_55523966_55523979	0.0294192	AAUGCCC	ENST00000474267.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr12_-_15942309_15942330	0.0286723	AAUGCCC	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr6_-_88411911_88411928	0.0282427	AAUGCCC	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr19_+_33166313_33166313	0.0275437	AAUGCCC	ENST00000334176.3|RGS9BP|ENSG00000186326.3|regulator of G protein signaling 9 binding protein
hg19_v2_chr17_-_48072574_48072597	0.0270378	AAUGCCC	ENST00000434704.2|DLX3|ENSG00000064195.7|distal-less homeobox 3
hg19_v2_chr9_+_131445928_131445934	0.0270128	AAUGCCC	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr9_-_127905736_127905815	0.0269726	AAUGCCC	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr9_+_114659046_114659102	0.0261998	AAUGCCC	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr7_-_27219632_27219660	0.0258734	AAUGCCC	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr17_-_78009647_78009681	0.0254977	AAUGCCC	ENST00000310924.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr3_-_21792838_21792927	0.0247533	AAUGCCC	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr17_-_27278304_27278408	0.0243581	AAUGCCC	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr11_-_102714534_102714534	0.0243025	AAUGCCC	ENST00000299855.5|MMP3|ENSG00000149968.7|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v2_chr11_+_63606373_63606418	0.0242084	AAUGCCC	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chrX_-_153979315_153979373	0.0241618	AAUGCCC	ENST00000369575.3|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000369568.4|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000424127.2|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3
hg19_v2_chr17_+_55333876_55333939	0.0231517	AAUGCCC	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr10_+_102505468_102505546	0.0218595	AAUGCCC	ENST00000361791.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000355243.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000428433.1|PAX2|ENSG00000075891.17|paired box 2 	ENST00000370296.2|PAX2|ENSG00000075891.17|paired box 2
hg19_v2_chrX_-_3631635_3631698	0.0207428	AAUGCCC	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr1_+_78470530_78470551	0.0202581	AAUGCCC	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr13_-_53024725_53024809	0.01932	AAUGCCC	ENST00000378060.4|VPS36|ENSG00000136100.8|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v2_chr21_+_38071430_38071456	0.0190114	AAUGCCC	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr17_-_56084578_56084707	0.0184647	AAUGCCC	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr2_-_240322643_240322661	0.0182422	AAUGCCC	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr18_-_60987220_60987386	0.0181048	AAUGCCC	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr12_-_66524482_66524548	0.0164117	AAUGCCC	ENST00000446587.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia) 	ENST00000266604.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia)
hg19_v2_chr2_-_43453734_43453751	0.0159763	AAUGCCC	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr8_-_57906362_57906452	0.0154567	AAUGCCC	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr1_+_145611010_145611046	0.0150433	AAUGCCC	ENST00000369291.5|RNF115|ENSG00000121848.9|ring finger protein 115
hg19_v2_chr5_+_148724993_148725102	0.0145783	AAUGCCC	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr16_-_67840442_67840555	0.0137085	AAUGCCC	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr3_-_33481835_33481905	0.0135834	AAUGCCC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr10_-_120514720_120514758	0.0126498	AAUGCCC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr13_-_46425865_46425902	0.0114215	AAUGCCC	ENST00000400405.2|SIAH3|ENSG00000215475.3|siah E3 ubiquitin protein ligase family member 3
hg19_v2_chr1_+_64239657_64239724	0.0112301	AAUGCCC	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr5_-_32444828_32444872	0.0108777	AAUGCCC	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr7_-_141401951_141401985	0.0108652	AAUGCCC	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr10_-_735553_735683	0.0107206	AAUGCCC	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr17_+_28804380_28804460	0.00923597	AAUGCCC	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr21_-_46293586_46293641	0.00921989	AAUGCCC	ENST00000445724.2|PTTG1IP|ENSG00000183255.7|pituitary tumor-transforming 1 interacting protein 	ENST00000397887.3|PTTG1IP|ENSG00000183255.7|pituitary tumor-transforming 1 interacting protein
hg19_v2_chr14_-_21905395_21905419	0.00916162	AAUGCCC	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr1_-_46598284_46598356	0.0080406	AAUGCCC	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr22_+_21271714_21271770	0.00759611	AAUGCCC	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr11_-_77532050_77532066	0.00620886	AAUGCCC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr20_-_39317868_39317884	0.00600557	AAUGCCC	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr7_-_83824169_83824217	0.00546084	AAUGCCC	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr7_-_111846435_111846471	0.00533859	AAUGCCC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr2_+_173600671_173600709	0.00421287	AAUGCCC	ENST00000409036.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr11_+_2466218_2466255	0.00396903	AAUGCCC	ENST00000155840.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr7_-_32931387_32931509	0.00344529	AAUGCCC	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr10_-_32636106_32636150	0.00338488	AAUGCCC	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr1_+_161284047_161284180	0.00288699	AAUGCCC	ENST00000367975.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000342751.4|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000432287.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000392169.2|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 	ENST00000513009.1|SDHC|ENSG00000143252.10|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
hg19_v2_chr9_+_128024067_128024190	0.00241907	AAUGCCC	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr16_+_67063036_67063088	0.0017792	AAUGCCC	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr6_+_106546808_106546833	0.000789036	AAUGCCC	ENST00000369089.3|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr5_-_65017921_65017968	0.0004575	AAUGCCC	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr11_-_18656028_18656040	0.00027876	AAUGCCC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr4_-_176923483_176923514	0.000258605	AAUGCCC	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr5_+_74632993_74633028	0.000165829	AAUGCCC	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
