hg19_v2_chr3_-_123603137_123603203	0.285147	AAGGUGC	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr5_-_180288248_180288291	0.278227	AAGGUGC	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr10_-_119806085_119806114	0.276319	AAGGUGC	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr5_+_78532003_78532017	0.272589	AAGGUGC	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr5_-_142783175_142783297	0.268375	AAGGUGC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr16_+_28996114_28996166	0.201553	AAGGUGC	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr6_-_132272504_132272519	0.197683	AAGGUGC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr3_+_105085734_105085760	0.191984	AAGGUGC	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr3_+_187930719_187930729	0.179706	AAGGUGC	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr6_-_111136513_111136525	0.177591	AAGGUGC	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr9_+_118916082_118916108	0.162552	AAGGUGC	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr10_+_111767720_111767752	0.161959	AAGGUGC	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr6_+_134274322_134274342	0.160164	AAGGUGC	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr5_-_73937244_73937274	0.156676	AAGGUGC	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr5_+_31193847_31193887	0.152252	AAGGUGC	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr21_-_18985158_18985226	0.145465	AAGGUGC	ENST00000339775.6|BTG3|ENSG00000154640.10|BTG family, member 3
hg19_v2_chr9_-_99180597_99180614	0.143635	AAGGUGC	ENST00000375256.4|ZNF367|ENSG00000165244.6|zinc finger protein 367
hg19_v2_chr15_+_39873268_39873294	0.133963	AAGGUGC	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr3_+_37903432_37903475	0.12937	AAGGUGC	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr5_-_171711061_171711076	0.126504	AAGGUGC	ENST00000393792.2|UBTD2|ENSG00000168246.5|ubiquitin domain containing 2
hg19_v2_chr17_+_68165657_68165688	0.125465	AAGGUGC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr9_+_91003271_91003386	0.125334	AAGGUGC	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chrX_+_150565653_150565694	0.124547	AAGGUGC	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr11_-_72853091_72853151	0.117196	AAGGUGC	ENST00000311172.7|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2 	ENST00000409314.1|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2
hg19_v2_chr2_-_153032484_153032537	0.113008	AAGGUGC	ENST00000263904.4|STAM2|ENSG00000115145.5|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg19_v2_chr12_+_12764773_12764852	0.111108	AAGGUGC	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr2_-_26101374_26101389	0.106214	AAGGUGC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr20_+_34700333_34700348	0.0985664	AAGGUGC	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr17_-_7382834_7382855	0.098456	AAGGUGC	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr3_+_152017181_152017229	0.0924756	AAGGUGC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr4_-_125633876_125633897	0.0919876	AAGGUGC	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr3_+_141205852_141205929	0.0901288	AAGGUGC	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr1_+_87794150_87794172	0.0897395	AAGGUGC	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr18_+_20513782_20513859	0.0886431	AAGGUGC	ENST00000399722.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399725.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399721.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000583594.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr9_-_123639600_123639627	0.0873573	AAGGUGC	ENST00000373896.3|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr5_+_102594403_102594445	0.0834181	AAGGUGC	ENST00000319933.2|C5orf30|ENSG00000181751.5|chromosome 5 open reading frame 30
hg19_v2_chr13_-_77601282_77601308	0.0819206	AAGGUGC	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr20_+_56884752_56884799	0.0798689	AAGGUGC	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr12_-_44200052_44200136	0.0789234	AAGGUGC	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr3_-_113465065_113465147	0.0786155	AAGGUGC	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr8_+_142402089_142402158	0.077355	AAGGUGC	ENST00000521578.1|PTP4A3|ENSG00000184489.7|protein tyrosine phosphatase type IVA, member 3 	ENST00000520105.1|PTP4A3|ENSG00000184489.7|protein tyrosine phosphatase type IVA, member 3 	ENST00000523147.1|PTP4A3|ENSG00000184489.7|protein tyrosine phosphatase type IVA, member 3
hg19_v2_chr18_-_29522989_29523104	0.0764779	AAGGUGC	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr1_+_62208091_62208182	0.0748323	AAGGUGC	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr6_+_122720681_122720713	0.0741745	AAGGUGC	ENST00000368455.4|HSF2|ENSG00000025156.8|heat shock transcription factor 2 	ENST00000452194.1|HSF2|ENSG00000025156.8|heat shock transcription factor 2
hg19_v2_chr1_-_20812690_20812763	0.0738656	AAGGUGC	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr18_-_45456930_45456970	0.0716504	AAGGUGC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr2_+_46926048_46926095	0.0699703	AAGGUGC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr5_-_43313574_43313614	0.0697059	AAGGUGC	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr12_+_19592602_19592648	0.0672312	AAGGUGC	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr1_+_162467595_162467655	0.0661755	AAGGUGC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr16_+_69599861_69599887	0.0618359	AAGGUGC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_+_22379120_22379177	0.0607167	AAGGUGC	ENST00000400259.1|CDC42|ENSG00000070831.11|cell division cycle 42 	ENST00000344548.3|CDC42|ENSG00000070831.11|cell division cycle 42
hg19_v2_chr2_-_201828356_201828412	0.0601746	AAGGUGC	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr11_+_94822968_94823042	0.0582476	AAGGUGC	ENST00000278505.4|ENDOD1|ENSG00000149218.4|endonuclease domain containing 1
hg19_v2_chr9_+_15553055_15553101	0.0575427	AAGGUGC	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr11_+_108093839_108093850	0.0569647	AAGGUGC	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr10_-_71930222_71930280	0.0566936	AAGGUGC	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr2_+_24714729_24714927	0.0566715	AAGGUGC	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr1_+_40862501_40862512	0.056149	AAGGUGC	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr1_+_32573636_32573673	0.0548251	AAGGUGC	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr9_+_116638562_116638606	0.0528227	AAGGUGC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr20_+_34020827_34020827	0.0526907	AAGGUGC	ENST00000374375.1|GDF5OS|ENSG00000204183.1|growth differentiation factor 5 opposite strand
hg19_v2_chr15_-_34628951_34629045	0.0524763	AAGGUGC	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr4_+_25314388_25314437	0.0508872	AAGGUGC	ENST00000302874.4|ZCCHC4|ENSG00000168228.10|zinc finger, CCHC domain containing 4
hg19_v2_chr10_-_735553_735683	0.0495352	AAGGUGC	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr9_+_125703282_125703337	0.0474256	AAGGUGC	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr8_+_8860314_8860388	0.0464527	AAGGUGC	ENST00000250263.7|ERI1|ENSG00000104626.10|exoribonuclease 1 	ENST00000519292.1|ERI1|ENSG00000104626.10|exoribonuclease 1
hg19_v2_chr2_+_173940442_173940625	0.0459255	AAGGUGC	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr10_-_81205373_81205429	0.0455769	AAGGUGC	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr6_-_11232891_11232915	0.0436947	AAGGUGC	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr16_+_30960375_30960473	0.0433854	AAGGUGC	ENST00000318663.4|ORAI3|ENSG00000175938.6|ORAI calcium release-activated calcium modulator 3 	ENST00000566237.1|ORAI3|ENSG00000175938.6|ORAI calcium release-activated calcium modulator 3 	ENST00000562699.1|ORAI3|ENSG00000175938.6|ORAI calcium release-activated calcium modulator 3
hg19_v2_chr1_-_204329013_204329086	0.0428252	AAGGUGC	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr4_-_157892498_157892546	0.0419751	AAGGUGC	ENST00000502773.1|PDGFC|ENSG00000145431.6|platelet derived growth factor C
hg19_v2_chr3_-_33481835_33481905	0.0391924	AAGGUGC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr10_+_102222798_102222798	0.0382049	AAGGUGC	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr3_+_85008089_85008189	0.0371361	AAGGUGC	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr1_+_173684047_173684136	0.0368503	AAGGUGC	ENST00000546011.1|KLHL20|ENSG00000076321.6|kelch-like family member 20 	ENST00000209884.4|KLHL20|ENSG00000076321.6|kelch-like family member 20
hg19_v2_chr5_+_96271141_96271168	0.0368297	AAGGUGC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr17_-_62340581_62340671	0.0363087	AAGGUGC	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr20_+_43595115_43595220	0.033395	AAGGUGC	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr1_-_110052302_110052380	0.0315295	AAGGUGC	ENST00000369864.4|AMIGO1|ENSG00000181754.6|adhesion molecule with Ig-like domain 1 	ENST00000369862.1|AMIGO1|ENSG00000181754.6|adhesion molecule with Ig-like domain 1
hg19_v2_chrX_+_108780062_108780105	0.0314095	AAGGUGC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr1_+_100435315_100435345	0.0310239	AAGGUGC	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr6_-_86352642_86352709	0.0300107	AAGGUGC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr5_-_142065612_142065638	0.029043	AAGGUGC	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr5_-_59189545_59189625	0.0275567	AAGGUGC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_-_228135599_228135640	0.0266248	AAGGUGC	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr12_+_109535373_109535414	0.0266044	AAGGUGC	ENST00000242576.2|UNG|ENSG00000076248.6|uracil-DNA glycosylase
hg19_v2_chr20_+_43104508_43104540	0.0257112	AAGGUGC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr1_-_109506036_109506129	0.0243116	AAGGUGC	ENST00000369976.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000356970.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000357393.4|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000369971.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000415331.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1
hg19_v2_chr1_+_78245303_78245351	0.0240152	AAGGUGC	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr4_+_6784401_6784510	0.0227944	AAGGUGC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr1_+_117452669_117452748	0.0225132	AAGGUGC	ENST00000393203.2|PTGFRN|ENSG00000134247.9|prostaglandin F2 receptor inhibitor
hg19_v2_chr3_-_169899504_169899542	0.0216993	AAGGUGC	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr1_+_84543734_84543775	0.0213731	AAGGUGC	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr15_-_56209306_56209344	0.020441	AAGGUGC	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr1_+_201617450_201617465	0.0189763	AAGGUGC	ENST00000295624.6|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367297.4|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367300.3|NAV1|ENSG00000134369.11|neuron navigator 1
hg19_v2_chr11_-_130184555_130184581	0.0178026	AAGGUGC	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr6_-_53409890_53409927	0.0177516	AAGGUGC	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr12_-_56583332_56583369	0.0173416	AAGGUGC	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr7_-_121036337_121036429	0.0167149	AAGGUGC	ENST00000426156.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000359943.3|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000412653.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C
hg19_v2_chr19_-_36523709_36523796	0.0167025	AAGGUGC	ENST00000592017.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3 	ENST00000360535.4|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chr10_+_72575643_72575753	0.0166781	AAGGUGC	ENST00000373202.3|SGPL1|ENSG00000166224.12|sphingosine-1-phosphate lyase 1
hg19_v2_chr20_+_30865429_30865480	0.0160536	AAGGUGC	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr12_+_56360550_56360566	0.0145516	AAGGUGC	ENST00000266970.4|CDK2|ENSG00000123374.6|cyclin-dependent kinase 2
hg19_v2_chr7_+_66386204_66386249	0.0142568	AAGGUGC	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr5_+_108083517_108083576	0.012485	AAGGUGC	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr20_+_277737_277737	0.0122488	AAGGUGC	ENST00000382352.3|ZCCHC3|ENSG00000177764.6|zinc finger, CCHC domain containing 3
hg19_v2_chr11_-_116968987_116969166	0.0119597	AAGGUGC	ENST00000434315.2|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000292055.4|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375288.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000542607.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000445177.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375300.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000446921.2|SIK3|ENSG00000160584.11|SIK family kinase 3
hg19_v2_chr7_-_44924939_44924993	0.0113957	AAGGUGC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr8_+_65492756_65492814	0.00947178	AAGGUGC	ENST00000321870.1|BHLHE22|ENSG00000180828.1|basic helix-loop-helix family, member e22
hg19_v2_chr15_-_90294523_90294541	0.00879995	AAGGUGC	ENST00000300057.4|MESP1|ENSG00000166823.5|mesoderm posterior 1 homolog (mouse)
hg19_v2_chr14_+_55518349_55518423	0.00646434	AAGGUGC	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr1_+_38259540_38259569	0.00630753	AAGGUGC	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr12_+_49212514_49212692	0.00615697	AAGGUGC	ENST00000301050.2|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit 	ENST00000548279.1|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit 	ENST00000547230.1|CACNB3|ENSG00000167535.3|calcium channel, voltage-dependent, beta 3 subunit
hg19_v2_chr21_-_40685477_40685496	0.00511428	AAGGUGC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr20_+_5107420_5107432	0.00450504	AAGGUGC	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr22_+_38093005_38093067	0.00432527	AAGGUGC	ENST00000406386.3|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr8_+_28747884_28747938	0.00400543	AAGGUGC	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr11_-_79151695_79151710	0.00347112	AAGGUGC	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr5_+_56111361_56111403	0.00327647	AAGGUGC	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr6_-_99873145_99873207	0.00238568	AAGGUGC	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr9_+_140513438_140513483	0.0018077	AAGGUGC	ENST00000462484.1|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1 	ENST00000334856.6|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1 	ENST00000460843.1|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1
hg19_v2_chr12_+_54943134_54943182	0.000438129	AAGGUGC	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
