hg19_v2_chr13_+_98605902_98605968	1.46487	AACACUG	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr9_-_6015607_6015634	1.25628	AACACUG	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr3_-_112360116_112360153	1.1779	AACACUG	ENST00000206423.3|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80 	ENST00000439685.2|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr1_-_200379180_200379191	1.13129	AACACUG	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr11_+_86748863_86748948	1.04365	AACACUG	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr3_+_187930719_187930729	1.03092	AACACUG	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr18_+_29171689_29171847	1.01513	AACACUG	ENST00000237014.3|TTR|ENSG00000118271.5|transthyretin
hg19_v2_chr11_-_105892937_105893130	0.975763	AACACUG	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr14_-_57735528_57735726	0.918139	AACACUG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr6_-_18265050_18265072	0.916113	AACACUG	ENST00000397239.3|DEK|ENSG00000124795.10|DEK oncogene
hg19_v2_chr7_-_156803329_156803362	0.909415	AACACUG	ENST00000252971.6|MNX1|ENSG00000130675.10|motor neuron and pancreas homeobox 1
hg19_v2_chr14_-_38064198_38064239	0.89036	AACACUG	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr5_+_82767284_82767310	0.87381	AACACUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr17_-_63052929_63052962	0.868427	AACACUG	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr10_-_62704005_62704045	0.837872	AACACUG	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr10_+_89622870_89622870	0.798733	AACACUG	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr6_+_64281906_64281922	0.773132	AACACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr10_-_81205373_81205429	0.763429	AACACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr9_+_118916082_118916108	0.76063	AACACUG	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr9_-_123476719_123476810	0.725778	AACACUG	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr15_+_77712993_77713081	0.724243	AACACUG	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr6_+_1610681_1610681	0.722532	AACACUG	ENST00000380874.2|FOXC1|ENSG00000054598.5|forkhead box C1
hg19_v2_chr1_-_150208291_150208309	0.7141	AACACUG	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr15_+_52311398_52311461	0.707383	AACACUG	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr8_+_55370487_55370503	0.702826	AACACUG	ENST00000297316.4|SOX17|ENSG00000164736.5|SRY (sex determining region Y)-box 17
hg19_v2_chr15_+_57210818_57210930	0.686697	AACACUG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr4_-_83719983_83720085	0.683415	AACACUG	ENST00000319540.4|SCD5|ENSG00000145284.7|stearoyl-CoA desaturase 5
hg19_v2_chr1_+_93913713_93913839	0.667488	AACACUG	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr10_+_112631547_112631596	0.648041	AACACUG	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr15_-_25684110_25684212	0.635506	AACACUG	ENST00000232165.3|UBE3A|ENSG00000114062.13|ubiquitin protein ligase E3A
hg19_v2_chr4_-_76598296_76598318	0.629201	AACACUG	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr7_+_99613195_99613206	0.626094	AACACUG	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr10_+_14920843_14920921	0.616016	AACACUG	ENST00000433779.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000378325.3|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000354919.6|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000313519.5|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000420416.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila)
hg19_v2_chr14_+_36295504_36295580	0.615874	AACACUG	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr17_+_4901199_4901291	0.609564	AACACUG	ENST00000320785.5|KIF1C|ENSG00000129250.7|kinesin family member 1C 	ENST00000574165.1|KIF1C|ENSG00000129250.7|kinesin family member 1C
hg19_v2_chr1_+_51701924_51702001	0.602575	AACACUG	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr1_+_28586006_28586044	0.586833	AACACUG	ENST00000253063.3|SESN2|ENSG00000130766.4|sestrin 2
hg19_v2_chr3_+_113465866_113465925	0.586169	AACACUG	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr3_-_24536253_24536328	0.583126	AACACUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr9_+_116638562_116638606	0.575031	AACACUG	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr21_-_15755446_15755508	0.570377	AACACUG	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr10_+_119000604_119000638	0.567391	AACACUG	ENST00000298472.5|SLC18A2|ENSG00000165646.7|solute carrier family 18 (vesicular monoamine transporter), member 2
hg19_v2_chr2_-_134326009_134326053	0.559695	AACACUG	ENST00000409261.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5 	ENST00000409213.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5
hg19_v2_chr7_-_108096822_108096889	0.550773	AACACUG	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr11_+_32914579_32914724	0.546347	AACACUG	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chrX_+_21857717_21857763	0.539138	AACACUG	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr10_+_69644404_69644427	0.527477	AACACUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr7_-_75988321_75988348	0.523706	AACACUG	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr1_+_40723779_40723828	0.515312	AACACUG	ENST00000372759.3|ZMPSTE24|ENSG00000084073.4|zinc metallopeptidase STE24
hg19_v2_chr2_-_152684977_152685021	0.507505	AACACUG	ENST00000428992.2|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A 	ENST00000295087.8|ARL5A|ENSG00000162980.12|ADP-ribosylation factor-like 5A
hg19_v2_chr14_-_100070363_100070467	0.505441	AACACUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr1_+_95582881_95582995	0.49824	AACACUG	ENST00000370203.4|TMEM56|ENSG00000152078.5|transmembrane protein 56 	ENST00000456991.1|TMEM56|ENSG00000152078.5|transmembrane protein 56
hg19_v2_chr17_-_1928621_1928641	0.495618	AACACUG	ENST00000331238.6|RTN4RL1|ENSG00000185924.6|reticulon 4 receptor-like 1
hg19_v2_chr20_+_33814457_33814506	0.490694	AACACUG	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr12_+_41086297_41086354	0.489228	AACACUG	ENST00000551295.2|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr13_+_42846272_42846334	0.488737	AACACUG	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr9_-_74980113_74980163	0.483392	AACACUG	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr17_-_46671323_46671323	0.474852	AACACUG	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr13_+_80055284_80055295	0.469561	AACACUG	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr1_+_61547894_61547980	0.461875	AACACUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr14_-_30396948_30396998	0.456469	AACACUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr1_+_211433275_211433335	0.455627	AACACUG	ENST00000367005.4|RCOR3|ENSG00000117625.9|REST corepressor 3
hg19_v2_chr14_-_90085458_90085557	0.454652	AACACUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr1_-_211752073_211752084	0.448576	AACACUG	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr12_-_104532062_104532071	0.441732	AACACUG	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr4_-_100815525_100815647	0.431427	AACACUG	ENST00000226522.8|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 	ENST00000499666.2|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
hg19_v2_chr1_-_85514120_85514202	0.421744	AACACUG	ENST00000370589.2|MCOLN3|ENSG00000055732.8|mucolipin 3 	ENST00000341115.4|MCOLN3|ENSG00000055732.8|mucolipin 3 	ENST00000370587.1|MCOLN3|ENSG00000055732.8|mucolipin 3
hg19_v2_chr3_+_152017181_152017229	0.416756	AACACUG	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr5_-_43313574_43313614	0.416648	AACACUG	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr3_+_179065474_179065530	0.416449	AACACUG	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr12_-_76478686_76478813	0.416241	AACACUG	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr1_+_218519577_218519594	0.394898	AACACUG	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr10_+_111767720_111767752	0.391507	AACACUG	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr1_+_200708671_200708744	0.386226	AACACUG	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr6_-_10415470_10415508	0.38367	AACACUG	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr13_-_110438914_110438937	0.382651	AACACUG	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr9_-_136933134_136933154	0.380159	AACACUG	ENST00000303407.7|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr19_-_41196534_41196568	0.374083	AACACUG	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr17_-_41856305_41856363	0.370639	AACACUG	ENST00000397937.2|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3 	ENST00000226004.3|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3
hg19_v2_chr3_+_33318914_33318985	0.36524	AACACUG	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr10_+_93558069_93558154	0.36264	AACACUG	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr6_-_122792919_122792970	0.358555	AACACUG	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr2_+_60983361_60983418	0.357527	AACACUG	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr7_-_92463210_92463231	0.355733	AACACUG	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr16_-_30798492_30798535	0.352567	AACACUG	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chrX_-_131352152_131352204	0.351064	AACACUG	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr4_-_140098339_140098392	0.348491	AACACUG	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr5_+_78908233_78908316	0.34688	AACACUG	ENST00000453514.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000423041.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000504233.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000428308.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4
hg19_v2_chr4_-_184580353_184580378	0.345186	AACACUG	ENST00000326397.5|RWDD4|ENSG00000182552.10|RWD domain containing 4
hg19_v2_chr8_-_95961578_95961639	0.34308	AACACUG	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr5_-_142783175_142783297	0.334541	AACACUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr20_+_277737_277737	0.332654	AACACUG	ENST00000382352.3|ZCCHC3|ENSG00000177764.6|zinc finger, CCHC domain containing 3
hg19_v2_chr5_-_32444828_32444872	0.330943	AACACUG	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr3_+_25469724_25469773	0.322511	AACACUG	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr6_+_155054459_155054561	0.320534	AACACUG	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr17_-_49198216_49198236	0.317059	AACACUG	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr1_-_84464780_84464862	0.316191	AACACUG	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr1_-_204380919_204380953	0.314481	AACACUG	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr3_+_141205852_141205929	0.312185	AACACUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr8_+_48920960_48921011	0.3111	AACACUG	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr13_-_73356009_73356074	0.310375	AACACUG	ENST00000377780.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae) 	ENST00000377767.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae)
hg19_v2_chr15_-_37390482_37390572	0.309368	AACACUG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr3_-_195808952_195808972	0.307807	AACACUG	ENST00000540528.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000392396.3|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000535031.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000420415.1|TFRC|ENSG00000072274.8|transferrin receptor
hg19_v2_chr17_+_28705921_28706000	0.304884	AACACUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr6_+_107811162_107811196	0.302401	AACACUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr7_+_129710350_129710434	0.299103	AACACUG	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr3_+_112709804_112709850	0.298975	AACACUG	ENST00000383677.3|GTPBP8|ENSG00000163607.10|GTP-binding protein 8 (putative)
hg19_v2_chr2_+_102508955_102508955	0.29638	AACACUG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr5_+_172483347_172483407	0.295616	AACACUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr4_+_144257915_144258009	0.295362	AACACUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr7_-_82073109_82073150	0.289031	AACACUG	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr7_+_35840542_35840671	0.28806	AACACUG	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr3_-_125313934_125313934	0.287475	AACACUG	ENST00000296220.5|OSBPL11|ENSG00000144909.7|oxysterol binding protein-like 11
hg19_v2_chr11_-_118550375_118550407	0.286818	AACACUG	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr7_-_135662056_135662114	0.284789	AACACUG	ENST00000393085.3|MTPN|ENSG00000105887.10|myotrophin 	ENST00000435723.1|MTPN|ENSG00000105887.10|myotrophin
hg19_v2_chr1_+_84543734_84543775	0.282764	AACACUG	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr2_+_169312350_169312372	0.280951	AACACUG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr14_-_31676964_31677017	0.275693	AACACUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr5_+_118407053_118407239	0.273633	AACACUG	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr1_-_166845515_166845564	0.271474	AACACUG	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr13_+_93879085_93879136	0.266852	AACACUG	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr16_+_53088885_53088961	0.2657	AACACUG	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr17_-_8534067_8534088	0.264775	AACACUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr7_-_6388537_6388611	0.262586	AACACUG	ENST00000313324.4|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A 	ENST00000530143.1|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A
hg19_v2_chr17_-_74137374_74137385	0.262032	AACACUG	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr12_+_125478241_125478260	0.259099	AACACUG	ENST00000341446.8|BRI3BP|ENSG00000184992.10|BRI3 binding protein
hg19_v2_chr6_+_10556215_10556240	0.255609	AACACUG	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr4_-_105416039_105416065	0.255436	AACACUG	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr15_-_72612470_72612529	0.255078	AACACUG	ENST00000287202.5|CELF6|ENSG00000140488.10|CUGBP, Elav-like family member 6
hg19_v2_chr10_-_71930222_71930280	0.254566	AACACUG	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr14_+_97263641_97263764	0.254327	AACACUG	ENST00000216639.3|VRK1|ENSG00000100749.3|vaccinia related kinase 1
hg19_v2_chr2_-_175499294_175499339	0.253992	AACACUG	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr3_+_152552685_152552736	0.253701	AACACUG	ENST00000305097.3|P2RY1|ENSG00000169860.4|purinergic receptor P2Y, G-protein coupled, 1
hg19_v2_chr1_+_93544791_93544807	0.247545	AACACUG	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr15_-_51058005_51058028	0.246306	AACACUG	ENST00000261854.5|SPPL2A|ENSG00000138600.5|signal peptide peptidase like 2A
hg19_v2_chr17_+_38278530_38278605	0.243915	AACACUG	ENST00000398532.4|MSL1|ENSG00000188895.7|male-specific lethal 1 homolog (Drosophila)
hg19_v2_chr4_-_40631859_40631889	0.24313	AACACUG	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr4_-_100871506_100871545	0.242695	AACACUG	ENST00000296417.5|H2AFZ|ENSG00000164032.7|H2A histone family, member Z
hg19_v2_chr2_+_138721850_138721890	0.239997	AACACUG	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr8_-_55014415_55014595	0.237134	AACACUG	ENST00000522007.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000521898.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000518546.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000316963.3|LYPLA1|ENSG00000120992.13|lysophospholipase I
hg19_v2_chr1_-_159832438_159832449	0.236863	AACACUG	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr17_-_19771216_19771230	0.236167	AACACUG	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr5_+_145826867_145826903	0.235117	AACACUG	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr17_-_4269768_4269835	0.234388	AACACUG	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr16_-_46865047_46865103	0.232008	AACACUG	ENST00000394806.2|C16orf87|ENSG00000155330.5|chromosome 16 open reading frame 87
hg19_v2_chrX_+_16804544_16804613	0.231832	AACACUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr11_-_129872712_129872755	0.230162	AACACUG	ENST00000358825.5|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000360871.3|PRDM10|ENSG00000170325.10|PR domain containing 10 	ENST00000528746.1|PRDM10|ENSG00000170325.10|PR domain containing 10
hg19_v2_chr2_-_167232484_167232503	0.229024	AACACUG	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr11_+_61159832_61159902	0.228642	AACACUG	ENST00000334888.5|TMEM216|ENSG00000187049.5|transmembrane protein 216 	ENST00000398979.3|TMEM216|ENSG00000187049.5|transmembrane protein 216
hg19_v2_chr17_-_58603568_58603610	0.227573	AACACUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr20_-_57617831_57617964	0.225049	AACACUG	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr10_+_65281123_65281183	0.224588	AACACUG	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr17_-_46178527_46178566	0.223797	AACACUG	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr8_+_26149007_26149061	0.221194	AACACUG	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr6_+_127439749_127439829	0.218727	AACACUG	ENST00000356698.4|RSPO3|ENSG00000146374.9|R-spondin 3
hg19_v2_chr10_-_33623564_33623603	0.217102	AACACUG	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr2_+_178257372_178257523	0.215135	AACACUG	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr5_+_56205081_56205092	0.215118	AACACUG	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr9_+_32384617_32384709	0.213368	AACACUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chrX_+_118370211_118370222	0.208468	AACACUG	ENST00000217971.7|PGRMC1|ENSG00000101856.8|progesterone receptor membrane component 1
hg19_v2_chr17_+_56160768_56160786	0.208021	AACACUG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr2_-_37899323_37899374	0.207973	AACACUG	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr1_-_205180664_205180727	0.20644	AACACUG	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr2_+_10861775_10861786	0.204874	AACACUG	ENST00000272238.4|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 	ENST00000381661.3|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg19_v2_chr3_+_73045936_73046128	0.203683	AACACUG	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr3_-_88108192_88108203	0.20227	AACACUG	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr3_+_19988566_19988648	0.202083	AACACUG	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr7_-_11871815_11871831	0.202078	AACACUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr2_+_30369807_30369847	0.200498	AACACUG	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chr13_-_30881621_30881675	0.200417	AACACUG	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr8_+_124780672_124780764	0.197435	AACACUG	ENST00000521166.1|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1 	ENST00000334705.7|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1
hg19_v2_chr4_-_68566832_68566897	0.190991	AACACUG	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr2_+_64681219_64681231	0.187797	AACACUG	ENST00000238875.5|LGALSL|ENSG00000119862.8|lectin, galactoside-binding-like
hg19_v2_chr12_-_46766577_46766650	0.186505	AACACUG	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr12_+_68042495_68042508	0.185208	AACACUG	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr18_+_19321281_19321334	0.184383	AACACUG	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr11_-_117186946_117186981	0.182947	AACACUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr16_+_19125252_19125267	0.181838	AACACUG	ENST00000566735.1|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2 	ENST00000381440.3|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2
hg19_v2_chr6_+_170102210_170102275	0.181059	AACACUG	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr1_-_243418344_243418356	0.179958	AACACUG	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr13_+_78109884_78109902	0.179044	AACACUG	ENST00000377246.3|SCEL|ENSG00000136155.12|sciellin 	ENST00000349847.3|SCEL|ENSG00000136155.12|sciellin
hg19_v2_chr16_+_21610797_21610850	0.176679	AACACUG	ENST00000358154.3|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr10_-_94333784_94333860	0.174205	AACACUG	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr2_-_24149977_24150007	0.174185	AACACUG	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr2_+_135676381_135676435	0.173891	AACACUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr10_+_60936347_60936358	0.173498	AACACUG	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chr10_-_65225722_65225755	0.172911	AACACUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr5_-_172198190_172198206	0.172517	AACACUG	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr21_+_34697209_34697245	0.171307	AACACUG	ENST00000270139.3|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chr1_+_168195229_168195294	0.170286	AACACUG	ENST00000271375.4|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2 	ENST00000367825.3|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2
hg19_v2_chr14_-_64010046_64010107	0.169482	AACACUG	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr17_-_49337392_49337465	0.168832	AACACUG	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr14_-_35182994_35183034	0.167634	AACACUG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr1_+_22379120_22379177	0.167145	AACACUG	ENST00000400259.1|CDC42|ENSG00000070831.11|cell division cycle 42 	ENST00000344548.3|CDC42|ENSG00000070831.11|cell division cycle 42
hg19_v2_chr20_+_43104508_43104540	0.165723	AACACUG	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr20_-_22565101_22565223	0.164325	AACACUG	ENST00000419308.2|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr5_-_132113036_132113061	0.164232	AACACUG	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr3_-_136471204_136471249	0.162523	AACACUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr11_+_101981169_101981210	0.160673	AACACUG	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr5_-_132073210_132073330	0.159527	AACACUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr1_-_171711387_171711420	0.158841	AACACUG	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr19_+_50432400_50432479	0.157939	AACACUG	ENST00000423777.2|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000600336.1|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000597227.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr1_-_212004090_212004168	0.157593	AACACUG	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr6_+_147525541_147525566	0.157162	AACACUG	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr1_+_29063271_29063283	0.155457	AACACUG	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr6_-_86352642_86352709	0.154524	AACACUG	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr11_-_82782861_82782949	0.154485	AACACUG	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr12_+_22778009_22778112	0.153644	AACACUG	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr10_-_88281494_88281572	0.151014	AACACUG	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr18_-_74207146_74207183	0.150957	AACACUG	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr21_-_19191703_19191718	0.150106	AACACUG	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr6_+_71998506_71998522	0.149631	AACACUG	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr3_+_62304712_62304732	0.149061	AACACUG	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr13_-_50367057_50367142	0.149031	AACACUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr1_+_20208870_20209006	0.146981	AACACUG	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr6_+_17600576_17600642	0.146874	AACACUG	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr10_-_64576105_64576133	0.146594	AACACUG	ENST00000242480.3|EGR2|ENSG00000122877.9|early growth response 2 	ENST00000411732.1|EGR2|ENSG00000122877.9|early growth response 2
hg19_v2_chr10_+_76871454_76871467	0.145279	AACACUG	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr9_-_98279241_98279339	0.144622	AACACUG	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr17_-_58042075_58042135	0.143821	AACACUG	ENST00000305783.8|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000589113.1|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000442346.2|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1
hg19_v2_chr15_-_85259330_85259352	0.143237	AACACUG	ENST00000560266.1|SEC11A|ENSG00000140612.9|SEC11 homolog A (S. cerevisiae)
hg19_v2_chr1_-_231560790_231560790	0.141977	AACACUG	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr17_-_38821373_38821440	0.138218	AACACUG	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr5_-_133561752_133561833	0.136316	AACACUG	ENST00000519718.1|CTD-2410N18.5|ENSG00000272772.1|S-phase kinase-associated protein 1  	ENST00000481195.1|PPP2CA|ENSG00000113575.5|protein phosphatase 2, catalytic subunit, alpha isozyme
hg19_v2_chr12_+_14518598_14518663	0.134111	AACACUG	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr2_+_29117509_29117569	0.133095	AACACUG	ENST00000407426.3|WDR43|ENSG00000163811.7|WD repeat domain 43
hg19_v2_chr22_-_22221900_22221970	0.13272	AACACUG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr10_-_43903217_43903267	0.130346	AACACUG	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr2_+_150187020_150187120	0.129666	AACACUG	ENST00000334166.4|LYPD6|ENSG00000187123.10|LY6/PLAUR domain containing 6
hg19_v2_chr3_+_58318594_58318694	0.127927	AACACUG	ENST00000356151.2|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000302779.5|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000383716.3|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000463280.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000383715.4|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000484288.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000479241.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000536660.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase
hg19_v2_chrX_+_70752917_70752933	0.126745	AACACUG	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr2_+_160568978_160569064	0.126436	AACACUG	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr4_-_186125077_186125182	0.12391	AACACUG	ENST00000458385.2|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000514798.1|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000296775.6|KIAA1430|ENSG00000164323.8|KIAA1430
hg19_v2_chr4_-_5894777_5894799	0.122206	AACACUG	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr5_-_41510656_41510713	0.120808	AACACUG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr5_-_95297678_95297775	0.120269	AACACUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr4_+_38665810_38665827	0.119344	AACACUG	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr2_-_214014959_214015058	0.118158	AACACUG	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr7_-_156685890_156685924	0.115576	AACACUG	ENST00000353442.5|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr20_+_3451650_3451729	0.112958	AACACUG	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr12_-_48744554_48744733	0.112835	AACACUG	ENST00000544117.2|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000548932.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000549125.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000301042.3|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000547026.1|ZNF641|ENSG00000167528.8|zinc finger protein 641
hg19_v2_chr3_+_133293278_133293492	0.112366	AACACUG	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr18_+_60382672_60382701	0.108993	AACACUG	ENST00000400316.4|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1 	ENST00000262719.5|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1
hg19_v2_chr19_-_2702681_2702707	0.10542	AACACUG	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr2_+_139259324_139259389	0.10522	AACACUG	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr10_+_63661053_63661079	0.104634	AACACUG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr3_-_116164306_116164380	0.104158	AACACUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr9_+_72873837_72873937	0.103539	AACACUG	ENST00000361138.5|SMC5|ENSG00000198887.7|structural maintenance of chromosomes 5
hg19_v2_chr2_+_148602058_148602185	0.10323	AACACUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr20_+_47538357_47538427	0.101399	AACACUG	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr1_+_67390578_67390698	0.100991	AACACUG	ENST00000371018.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355977.6|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000357692.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000401041.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371016.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371014.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371012.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr21_+_18885430_18885448	0.100929	AACACUG	ENST00000356275.6|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000400165.1|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000400169.1|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor 	ENST00000306618.10|CXADR|ENSG00000154639.14|coxsackie virus and adenovirus receptor
hg19_v2_chr5_-_56247935_56247959	0.100473	AACACUG	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr10_-_61666267_61666414	0.099399	AACACUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr3_+_85008089_85008189	0.0984815	AACACUG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr14_+_73704201_73704277	0.0970922	AACACUG	ENST00000340738.5|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein 	ENST00000427855.1|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein 	ENST00000381166.3|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein
hg19_v2_chr1_-_91487013_91487070	0.0967595	AACACUG	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr6_-_13711773_13711796	0.0963324	AACACUG	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr10_+_76586348_76586400	0.0958171	AACACUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr18_-_21977748_21977823	0.095712	AACACUG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr1_+_82266053_82266082	0.094964	AACACUG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr12_-_109125285_109125372	0.0945878	AACACUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr4_+_48343339_48343414	0.0931987	AACACUG	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr2_+_148778570_148778589	0.0914282	AACACUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr2_+_71558858_71558936	0.0893928	AACACUG	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr4_-_16228120_16228164	0.089187	AACACUG	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr14_+_60558627_60558738	0.0883279	AACACUG	ENST00000317623.4|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000391611.2|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406854.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406949.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila)
hg19_v2_chr7_-_105517021_105517050	0.087295	AACACUG	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chrX_+_40944871_40944888	0.0856338	AACACUG	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr3_+_132136331_132136378	0.0856056	AACACUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr18_+_32558208_32558340	0.0848211	AACACUG	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr2_+_46926048_46926095	0.0841431	AACACUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr4_-_125633876_125633897	0.0841084	AACACUG	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr10_+_116581503_116581570	0.0839902	AACACUG	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr12_-_42632016_42632089	0.0837917	AACACUG	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr4_+_119809984_119810024	0.0818848	AACACUG	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr11_+_45825896_45825965	0.0813415	AACACUG	ENST00000314134.3|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr17_+_53342311_53342400	0.0796266	AACACUG	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr4_+_87856129_87856186	0.0780579	AACACUG	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr2_+_234545092_234545100	0.0774595	AACACUG	ENST00000344644.5|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr7_-_128695147_128695203	0.0771356	AACACUG	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr3_-_72496035_72496069	0.0736134	AACACUG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_+_30323923_30324060	0.0726227	AACACUG	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr3_-_171178157_171178225	0.0724928	AACACUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_+_36584662_36584730	0.071041	AACACUG	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr9_+_108210279_108210435	0.0709243	AACACUG	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr11_+_114270752_114270856	0.0705686	AACACUG	ENST00000540163.1|RBM7|ENSG00000076053.6|RNA binding motif protein 7
hg19_v2_chr1_-_67519782_67519810	0.0701694	AACACUG	ENST00000235345.5|SLC35D1|ENSG00000116704.6|solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
hg19_v2_chr11_+_134094508_134094617	0.0701074	AACACUG	ENST00000281187.5|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe) 	ENST00000525095.2|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe)
hg19_v2_chrX_-_119694538_119694555	0.0689302	AACACUG	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr6_+_163835669_163835693	0.0680824	AACACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr15_-_56535464_56535521	0.0661222	AACACUG	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr7_-_79082867_79082900	0.0656508	AACACUG	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr9_+_131843377_131843413	0.0642899	AACACUG	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr2_+_234621551_234621638	0.0641012	AACACUG	ENST00000608381.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000373414.3|UGT1A5|ENSG00000240224.1|UDP glucuronosyltransferase 1 family, polypeptide A5
hg19_v2_chr18_-_29522989_29523104	0.063524	AACACUG	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr12_+_70636765_70636817	0.0626361	AACACUG	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr12_+_60083118_60083157	0.0622008	AACACUG	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr9_-_27529726_27529827	0.0621094	AACACUG	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr8_+_30013813_30013872	0.0619014	AACACUG	ENST00000221114.3|DCTN6|ENSG00000104671.3|dynactin 6
hg19_v2_chr1_-_175712829_175712906	0.0603498	AACACUG	ENST00000367674.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr3_-_160283348_160283376	0.0601688	AACACUG	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr16_-_85045131_85045147	0.0587007	AACACUG	ENST00000313732.4|ZDHHC7|ENSG00000153786.8|zinc finger, DHHC-type containing 7
hg19_v2_chr12_-_42877764_42877803	0.0582971	AACACUG	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr17_-_38804061_38804112	0.0582652	AACACUG	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr1_+_110162448_110162517	0.0579711	AACACUG	ENST00000342115.4|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000469039.2|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000474459.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000528667.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr2_+_234627424_234627444	0.0578682	AACACUG	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr18_+_43753974_43754019	0.0574381	AACACUG	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr12_+_7342178_7342215	0.0563403	AACACUG	ENST00000266563.5|PEX5|ENSG00000139197.6|peroxisomal biogenesis factor 5 	ENST00000543974.1|PEX5|ENSG00000139197.6|peroxisomal biogenesis factor 5
hg19_v2_chr15_-_65715401_65715421	0.0554462	AACACUG	ENST00000352385.2|IGDCC4|ENSG00000103742.7|immunoglobulin superfamily, DCC subclass, member 4
hg19_v2_chr14_+_61201445_61201530	0.0527977	AACACUG	ENST00000261245.4|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1 	ENST00000539616.2|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1
hg19_v2_chr12_-_122018859_122018941	0.0526077	AACACUG	ENST00000536437.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000377071.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000538046.2|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr1_+_236305826_236305877	0.0523464	AACACUG	ENST00000366592.3|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B 	ENST00000366591.4|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B
hg19_v2_chr7_-_43965937_43966015	0.0519412	AACACUG	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr1_+_33283043_33283198	0.0509188	AACACUG	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chrX_-_13956737_13956808	0.0506339	AACACUG	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr2_+_234637754_234637773	0.0488386	AACACUG	ENST00000482026.1|UGT1A3|ENSG00000243135.1|UDP glucuronosyltransferase 1 family, polypeptide A3 	ENST00000609767.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr6_+_167412665_167412698	0.0470139	AACACUG	ENST00000366847.4|FGFR1OP|ENSG00000213066.7|FGFR1 oncogene partner
hg19_v2_chr5_+_138629417_138629467	0.0460637	AACACUG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr16_+_3507985_3508061	0.0453946	AACACUG	ENST00000421765.3|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000610180.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000608993.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000360862.5|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000414063.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr4_+_159690218_159690290	0.0451262	AACACUG	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr21_+_34915337_34915397	0.0432211	AACACUG	ENST00000290239.6|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381692.2|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000300278.4|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381679.4|SON|ENSG00000159140.13|SON DNA binding protein
hg19_v2_chr22_-_28315115_28315260	0.0419059	AACACUG	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr3_-_58419537_58419584	0.0409981	AACACUG	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr12_+_45609893_45609909	0.0395557	AACACUG	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr16_-_71758602_71758604	0.0393587	AACACUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr7_-_152133059_152133102	0.0392637	AACACUG	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr11_+_13299186_13299432	0.0391438	AACACUG	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr3_-_113465065_113465147	0.0385498	AACACUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr2_+_234590556_234590584	0.0381537	AACACUG	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr4_+_699537_699600	0.0379564	AACACUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr2_-_54087066_54087297	0.0378517	AACACUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr3_-_33686743_33686807	0.0365876	AACACUG	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr21_-_44846999_44847017	0.0360558	AACACUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr10_+_115803650_115803806	0.0358353	AACACUG	ENST00000369295.2|ADRB1|ENSG00000043591.4|adrenoceptor beta 1
hg19_v2_chr20_+_55204351_55204377	0.0356545	AACACUG	ENST00000201031.2|TFAP2C|ENSG00000087510.5|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
hg19_v2_chr13_-_31038370_31038509	0.0350159	AACACUG	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr1_+_87380299_87380475	0.0340954	AACACUG	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr20_+_5107420_5107432	0.0338001	AACACUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr2_-_37193606_37193633	0.0322116	AACACUG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chrX_+_69664706_69664819	0.0310553	AACACUG	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr2_-_161350305_161350391	0.0308651	AACACUG	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr2_+_234526272_234526291	0.029997	AACACUG	ENST00000373450.4|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr4_-_121993673_121993698	0.0267484	AACACUG	ENST00000379692.4|NDNF|ENSG00000173376.9|neuron-derived neurotrophic factor
hg19_v2_chr5_-_95158375_95158485	0.0258839	AACACUG	ENST00000512469.2|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000379979.4|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000505427.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000508780.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase)
hg19_v2_chr1_-_23670817_23670829	0.0252429	AACACUG	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr3_-_113160334_113160457	0.023842	AACACUG	ENST00000393845.2|WDR52|ENSG00000206530.4|WD repeat domain 52 	ENST00000295868.2|WDR52|ENSG00000206530.4|WD repeat domain 52
hg19_v2_chr7_-_27224795_27224840	0.023238	AACACUG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr13_-_77460525_77460548	0.0225312	AACACUG	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr11_+_36589547_36589575	0.0222222	AACACUG	ENST00000299440.5|RAG1|ENSG00000166349.5|recombination activating gene 1
hg19_v2_chr9_-_116102530_116102549	0.0211351	AACACUG	ENST00000374195.3|WDR31|ENSG00000148225.11|WD repeat domain 31 	ENST00000341761.4|WDR31|ENSG00000148225.11|WD repeat domain 31
hg19_v2_chr11_-_3013603_3013621	0.0198378	AACACUG	ENST00000380542.4|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4 	ENST00000526115.1|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4
hg19_v2_chr17_-_17875688_17875736	0.0176298	AACACUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr7_+_8008418_8008443	0.0166436	AACACUG	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chrX_+_153686614_153686629	0.01591	AACACUG	ENST00000369682.3|PLXNA3|ENSG00000130827.5|plexin A3
hg19_v2_chr9_-_124989804_124989865	0.0155949	AACACUG	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr9_+_90112741_90112761	0.0155514	AACACUG	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr3_+_44626446_44626477	0.0145955	AACACUG	ENST00000441021.1|ZNF660|ENSG00000144792.5|zinc finger protein 660 	ENST00000322734.2|ZNF660|ENSG00000144792.5|zinc finger protein 660
hg19_v2_chr2_+_234580499_234580512	0.0135973	AACACUG	ENST00000354728.4|UGT1A9|ENSG00000241119.1|UDP glucuronosyltransferase 1 family, polypeptide A9
hg19_v2_chr1_-_232697304_232697304	0.0132304	AACACUG	ENST00000366630.1|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr1_+_100503643_100503677	0.0125465	AACACUG	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr9_-_123555655_123555712	0.0103419	AACACUG	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr15_+_41523335_41523350	0.0103306	AACACUG	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr1_-_35658736_35658754	0.0100734	AACACUG	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr12_+_96588143_96588185	0.00933843	AACACUG	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr3_+_38206975_38207101	0.00929939	AACACUG	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr8_-_110346614_110346722	0.00916537	AACACUG	ENST00000239690.4|NUDCD1|ENSG00000120526.6|NudC domain containing 1
hg19_v2_chr7_+_128379346_128379447	0.0086865	AACACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr1_+_24742264_24742312	0.00664087	AACACUG	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr1_+_218458625_218458660	0.00541547	AACACUG	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr12_-_56727487_56727533	0.0039924	AACACUG	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr11_-_67888671_67888774	0.00376443	AACACUG	ENST00000265689.4|CHKA|ENSG00000110721.7|choline kinase alpha
hg19_v2_chr17_+_30677136_30677205	0.00327173	AACACUG	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr16_-_20911641_20911720	0.00296961	AACACUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr9_+_110045537_110045572	0.00211204	AACACUG	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr6_-_107436473_107436543	0.00173514	AACACUG	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chrX_-_122866874_122866911	0.00155063	AACACUG	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr19_+_19322758_19322782	0.00148607	AACACUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr12_+_98987369_98987503	0.00136875	AACACUG	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr15_-_72410109_72410161	0.00126288	AACACUG	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr3_+_107241783_107241850	0.0010644	AACACUG	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
