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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for UGCAGUC

Z-value: 0.42

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miRNA associated with seed UGCAGUC

NamemiRBASE accession
hsa-miR-455-3p.2

Activity profile of UGCAGUC motif

Sorted Z-values of UGCAGUC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr16_+_50582222 0.24 ENST00000268459.3
NKD1
naked cuticle homolog 1 (Drosophila)
chr17_-_78450398 0.21 ENST00000306773.4
NPTX1
neuronal pentraxin I
chr14_-_77495007 0.16 ENST00000238647.3
IRF2BPL
interferon regulatory factor 2 binding protein-like
chr7_+_101928380 0.16 ENST00000536178.1
SH2B2
SH2B adaptor protein 2
chr3_-_114790179 0.14 ENST00000462705.1
ZBTB20
zinc finger and BTB domain containing 20
chr1_+_66999799 0.14 ENST00000371035.3
ENST00000371036.3
ENST00000371037.4
SGIP1
SH3-domain GRB2-like (endophilin) interacting protein 1
chrX_+_154997474 0.12 ENST00000302805.2
SPRY3
sprouty homolog 3 (Drosophila)
chr1_-_179198702 0.12 ENST00000502732.1
ABL2
c-abl oncogene 2, non-receptor tyrosine kinase
chrX_-_54384425 0.12 ENST00000375169.3
ENST00000354646.2
WNK3
WNK lysine deficient protein kinase 3
chr10_-_104262426 0.11 ENST00000487599.1
ACTR1A
ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
chr2_+_155554797 0.11 ENST00000295101.2
KCNJ3
potassium inwardly-rectifying channel, subfamily J, member 3
chr10_-_94003003 0.11 ENST00000412050.4
CPEB3
cytoplasmic polyadenylation element binding protein 3
chr17_-_61777459 0.11 ENST00000578993.1
ENST00000583211.1
ENST00000259006.3
LIMD2
LIM domain containing 2
chr8_-_119124045 0.10 ENST00000378204.2
EXT1
exostosin glycosyltransferase 1
chr9_+_112403088 0.10 ENST00000448454.2
PALM2
paralemmin 2
chr2_-_154335300 0.10 ENST00000325926.3
RPRM
reprimo, TP53 dependent G2 arrest mediator candidate
chr11_+_33278811 0.09 ENST00000303296.4
ENST00000379016.3
HIPK3
homeodomain interacting protein kinase 3
chr14_+_103243813 0.09 ENST00000560371.1
ENST00000347662.4
ENST00000392745.2
ENST00000539721.1
ENST00000560463.1
TRAF3
TNF receptor-associated factor 3
chrX_-_132549506 0.09 ENST00000370828.3
GPC4
glypican 4
chrX_-_74145273 0.09 ENST00000055682.6
KIAA2022
KIAA2022
chr12_+_104850740 0.09 ENST00000547956.1
ENST00000549260.1
ENST00000303694.5
CHST11
carbohydrate (chondroitin 4) sulfotransferase 11
chr12_-_69326940 0.08 ENST00000549781.1
ENST00000548262.1
ENST00000551568.1
ENST00000548954.1
CPM
carboxypeptidase M
chr11_-_70507901 0.08 ENST00000449833.2
ENST00000357171.3
ENST00000449116.2
SHANK2
SH3 and multiple ankyrin repeat domains 2
chr6_+_118228657 0.08 ENST00000360388.4
SLC35F1
solute carrier family 35, member F1
chr6_-_30585009 0.08 ENST00000376511.2
PPP1R10
protein phosphatase 1, regulatory subunit 10
chr3_-_164913777 0.07 ENST00000475390.1
SLITRK3
SLIT and NTRK-like family, member 3
chr16_-_73082274 0.07 ENST00000268489.5
ZFHX3
zinc finger homeobox 3
chr19_-_46476791 0.07 ENST00000263257.5
NOVA2
neuro-oncological ventral antigen 2
chr1_+_39456895 0.07 ENST00000432648.3
ENST00000446189.2
ENST00000372984.4
AKIRIN1
akirin 1
chr7_+_28452130 0.07 ENST00000357727.2
CREB5
cAMP responsive element binding protein 5
chr3_-_18466787 0.07 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chr14_+_93389425 0.07 ENST00000216492.5
ENST00000334654.4
CHGA
chromogranin A (parathyroid secretory protein 1)
chrX_-_110038990 0.07 ENST00000372045.1
ENST00000394797.4
CHRDL1
chordin-like 1
chr1_-_217262969 0.07 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr1_-_78444776 0.07 ENST00000370767.1
ENST00000421641.1
FUBP1
far upstream element (FUSE) binding protein 1
chr19_+_1000418 0.07 ENST00000234389.3
GRIN3B
glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
chr1_-_53793584 0.07 ENST00000354412.3
ENST00000347547.2
ENST00000306052.6
LRP8
low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
chr9_-_131790550 0.07 ENST00000372554.4
ENST00000372564.3
SH3GLB2
SH3-domain GRB2-like endophilin B2
chr7_+_140774032 0.07 ENST00000565468.1
TMEM178B
transmembrane protein 178B
chr6_+_99282570 0.06 ENST00000328345.5
POU3F2
POU class 3 homeobox 2
chr1_+_43148059 0.06 ENST00000321358.7
ENST00000332220.6
YBX1
Y box binding protein 1
chr9_+_77112244 0.06 ENST00000376896.3
RORB
RAR-related orphan receptor B
chr2_+_166326157 0.06 ENST00000421875.1
ENST00000314499.7
ENST00000409664.1
CSRNP3
cysteine-serine-rich nuclear protein 3
chr15_+_63481668 0.06 ENST00000321437.4
ENST00000559006.1
ENST00000448330.2
RAB8B
RAB8B, member RAS oncogene family
chr16_+_29823552 0.06 ENST00000300797.6
PRRT2
proline-rich transmembrane protein 2
chr1_-_57045228 0.06 ENST00000371250.3
PPAP2B
phosphatidic acid phosphatase type 2B
chr19_+_35759824 0.06 ENST00000343550.5
USF2
upstream transcription factor 2, c-fos interacting
chr1_-_113249948 0.06 ENST00000339083.7
ENST00000369642.3
RHOC
ras homolog family member C
chr3_-_129407535 0.06 ENST00000432054.2
TMCC1
transmembrane and coiled-coil domain family 1
chr6_-_16761678 0.06 ENST00000244769.4
ENST00000436367.1
ATXN1
ataxin 1
chr10_+_48189612 0.06 ENST00000453919.1
AGAP9
ArfGAP with GTPase domain, ankyrin repeat and PH domain 9
chr18_+_19749386 0.06 ENST00000269216.3
GATA6
GATA binding protein 6
chr8_-_114389353 0.06 ENST00000343508.3
CSMD3
CUB and Sushi multiple domains 3
chr10_-_62149433 0.05 ENST00000280772.2
ANK3
ankyrin 3, node of Ranvier (ankyrin G)
chr5_+_149109825 0.05 ENST00000360453.4
ENST00000394320.3
ENST00000309241.5
PPARGC1B
peroxisome proliferator-activated receptor gamma, coactivator 1 beta
chr3_-_21792838 0.05 ENST00000281523.2
ZNF385D
zinc finger protein 385D
chr15_+_66161871 0.05 ENST00000569896.1
RAB11A
RAB11A, member RAS oncogene family
chr16_+_50187556 0.05 ENST00000561678.1
ENST00000357464.3
PAPD5
PAP associated domain containing 5
chr21_+_22370608 0.05 ENST00000400546.1
NCAM2
neural cell adhesion molecule 2
chr1_-_21377447 0.05 ENST00000374937.3
ENST00000264211.8
EIF4G3
eukaryotic translation initiation factor 4 gamma, 3
chr6_-_46293378 0.05 ENST00000330430.6
RCAN2
regulator of calcineurin 2
chr5_+_152870106 0.05 ENST00000285900.5
GRIA1
glutamate receptor, ionotropic, AMPA 1
chr7_+_119913688 0.04 ENST00000331113.4
KCND2
potassium voltage-gated channel, Shal-related subfamily, member 2
chr2_-_69870835 0.04 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr20_+_62795827 0.04 ENST00000328439.1
ENST00000536311.1
MYT1
myelin transcription factor 1
chr4_-_129208940 0.04 ENST00000296425.5
PGRMC2
progesterone receptor membrane component 2
chr16_+_9185450 0.04 ENST00000327827.7
C16orf72
chromosome 16 open reading frame 72
chr12_-_50101165 0.04 ENST00000352151.5
ENST00000335154.5
ENST00000293590.5
FMNL3
formin-like 3
chr12_-_16761007 0.04 ENST00000354662.1
ENST00000441439.2
LMO3
LIM domain only 3 (rhombotin-like 2)
chr2_+_149632783 0.04 ENST00000435030.1
KIF5C
kinesin family member 5C
chr4_-_73434498 0.04 ENST00000286657.4
ADAMTS3
ADAM metallopeptidase with thrombospondin type 1 motif, 3
chr19_-_12834739 0.04 ENST00000589337.1
ENST00000425528.1
ENST00000441499.1
ENST00000588216.1
TNPO2
transportin 2
chr6_-_119670919 0.04 ENST00000368468.3
MAN1A1
mannosidase, alpha, class 1A, member 1
chr18_+_63418068 0.04 ENST00000397968.2
CDH7
cadherin 7, type 2
chr16_-_4897266 0.04 ENST00000591451.1
ENST00000436648.5
ENST00000381983.3
ENST00000588297.1
ENST00000321919.9
GLYR1
glyoxylate reductase 1 homolog (Arabidopsis)
chr10_+_82297658 0.03 ENST00000339284.2
SH2D4B
SH2 domain containing 4B
chr17_-_62502639 0.03 ENST00000225792.5
ENST00000581697.1
ENST00000584279.1
ENST00000577922.1
DDX5
DEAD (Asp-Glu-Ala-Asp) box helicase 5
chr5_+_122424816 0.03 ENST00000407847.4
PRDM6
PR domain containing 6
chr9_-_37034028 0.03 ENST00000520281.1
ENST00000446742.1
ENST00000522003.1
ENST00000523145.1
ENST00000414447.1
ENST00000377847.2
ENST00000377853.2
ENST00000377852.2
ENST00000523241.1
ENST00000520154.1
ENST00000358127.4
PAX5
paired box 5
chr16_-_56459354 0.03 ENST00000290649.5
AMFR
autocrine motility factor receptor, E3 ubiquitin protein ligase
chr3_+_184032919 0.03 ENST00000427845.1
ENST00000342981.4
ENST00000319274.6
EIF4G1
eukaryotic translation initiation factor 4 gamma, 1
chr7_+_114055052 0.03 ENST00000462331.1
ENST00000408937.3
ENST00000403559.4
ENST00000350908.4
ENST00000393498.2
ENST00000393495.3
ENST00000378237.3
ENST00000393489.3
FOXP2
forkhead box P2
chr2_-_208030647 0.03 ENST00000309446.6
KLF7
Kruppel-like factor 7 (ubiquitous)
chr14_-_21737610 0.02 ENST00000320084.7
ENST00000449098.1
ENST00000336053.6
HNRNPC
heterogeneous nuclear ribonucleoprotein C (C1/C2)
chr1_+_237205476 0.02 ENST00000366574.2
RYR2
ryanodine receptor 2 (cardiac)
chr1_+_244214577 0.02 ENST00000358704.4
ZBTB18
zinc finger and BTB domain containing 18
chr1_-_35658736 0.02 ENST00000357214.5
SFPQ
splicing factor proline/glutamine-rich
chr11_-_72504637 0.02 ENST00000536377.1
ENST00000359373.5
STARD10
ARAP1
StAR-related lipid transfer (START) domain containing 10
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr7_-_32931387 0.02 ENST00000304056.4
KBTBD2
kelch repeat and BTB (POZ) domain containing 2
chrX_+_17393543 0.02 ENST00000380060.3
NHS
Nance-Horan syndrome (congenital cataracts and dental anomalies)
chr3_-_122233723 0.02 ENST00000493510.1
ENST00000344337.6
ENST00000476916.1
ENST00000465882.1
KPNA1
karyopherin alpha 1 (importin alpha 5)
chr1_+_11751748 0.02 ENST00000294485.5
DRAXIN
dorsal inhibitory axon guidance protein
chr15_+_33603147 0.02 ENST00000415757.3
ENST00000389232.4
RYR3
ryanodine receptor 3
chr14_+_71108460 0.02 ENST00000256367.2
TTC9
tetratricopeptide repeat domain 9
chr19_-_3700388 0.02 ENST00000589578.1
ENST00000537021.1
ENST00000539785.1
ENST00000335312.3
PIP5K1C
phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
chr10_-_88126224 0.02 ENST00000327946.7
GRID1
glutamate receptor, ionotropic, delta 1
chr3_+_93781728 0.02 ENST00000314622.4
NSUN3
NOP2/Sun domain family, member 3
chr11_-_106889250 0.02 ENST00000526355.2
GUCY1A2
guanylate cyclase 1, soluble, alpha 2
chr4_-_142053952 0.02 ENST00000515673.2
RNF150
ring finger protein 150
chr2_-_159313214 0.02 ENST00000409889.1
ENST00000283233.5
ENST00000536771.1
CCDC148
coiled-coil domain containing 148
chr3_-_11762202 0.02 ENST00000445411.1
ENST00000404339.1
ENST00000273038.3
VGLL4
vestigial like 4 (Drosophila)
chr12_+_120933904 0.02 ENST00000550178.1
ENST00000550845.1
ENST00000549989.1
ENST00000552870.1
DYNLL1
dynein, light chain, LC8-type 1
chr10_-_47213626 0.02 ENST00000452145.2
AGAP10
ArfGAP with GTPase domain, ankyrin repeat and PH domain 10
chr17_+_18087553 0.01 ENST00000399138.4
ALKBH5
alkB, alkylation repair homolog 5 (E. coli)
chr1_+_167190066 0.01 ENST00000367866.2
ENST00000429375.2
ENST00000452019.1
ENST00000420254.3
ENST00000541643.3
POU2F1
POU class 2 homeobox 1
chr1_+_36396677 0.01 ENST00000373191.4
ENST00000397828.2
AGO3
argonaute RISC catalytic component 3
chr15_+_38544476 0.01 ENST00000299084.4
SPRED1
sprouty-related, EVH1 domain containing 1
chr8_+_9009202 0.01 ENST00000518496.1
RP11-10A14.4
Uncharacterized protein
chr8_-_66754172 0.01 ENST00000401827.3
PDE7A
phosphodiesterase 7A
chr3_-_15106747 0.01 ENST00000449354.2
ENST00000444840.2
ENST00000253686.2
MRPS25
mitochondrial ribosomal protein S25
chr11_-_86666427 0.01 ENST00000531380.1
FZD4
frizzled family receptor 4
chr16_-_68344830 0.01 ENST00000263997.6
SLC7A6OS
solute carrier family 7, member 6 opposite strand
chr6_+_161412759 0.01 ENST00000366919.2
ENST00000392142.4
ENST00000366920.2
ENST00000348824.7
MAP3K4
mitogen-activated protein kinase kinase kinase 4
chr17_-_73775839 0.01 ENST00000592643.1
ENST00000591890.1
ENST00000587171.1
ENST00000254810.4
ENST00000589599.1
H3F3B
H3 histone, family 3B (H3.3B)
chr7_+_91875508 0.01 ENST00000265742.3
ANKIB1
ankyrin repeat and IBR domain containing 1
chr17_+_66508537 0.01 ENST00000392711.1
ENST00000585427.1
ENST00000589228.1
ENST00000536854.2
ENST00000588702.1
ENST00000589309.1
PRKAR1A
protein kinase, cAMP-dependent, regulatory, type I, alpha
chr3_+_137906109 0.01 ENST00000481646.1
ENST00000469044.1
ENST00000491704.1
ENST00000461600.1
ARMC8
armadillo repeat containing 8
chr1_+_28052456 0.01 ENST00000373954.6
ENST00000419687.2
FAM76A
family with sequence similarity 76, member A
chrX_-_154493791 0.00 ENST00000369454.3
RAB39B
RAB39B, member RAS oncogene family
chr9_+_124413873 0.00 ENST00000408936.3
DAB2IP
DAB2 interacting protein
chr10_-_120514720 0.00 ENST00000369151.3
ENST00000340214.4
CACUL1
CDK2-associated, cullin domain 1
chr4_-_42659102 0.00 ENST00000264449.10
ENST00000510289.1
ENST00000381668.5
ATP8A1
ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr2_+_228336849 0.00 ENST00000409979.2
ENST00000310078.8
AGFG1
ArfGAP with FG repeats 1
chr9_-_123555655 0.00 ENST00000340778.5
ENST00000453291.1
ENST00000608872.1
FBXW2
F-box and WD repeat domain containing 2
chr7_-_105517021 0.00 ENST00000318724.4
ENST00000419735.3
ATXN7L1
ataxin 7-like 1

Network of associatons between targets according to the STRING database.

First level regulatory network of UGCAGUC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0007525 somatic muscle development(GO:0007525)
0.0 0.1 GO:1900365 positive regulation of mRNA polyadenylation(GO:1900365)
0.0 0.1 GO:0033037 polysaccharide localization(GO:0033037)
0.0 0.1 GO:2000686 regulation of rubidium ion transmembrane transporter activity(GO:2000686)
0.0 0.1 GO:1900738 dense core granule biogenesis(GO:0061110) positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900738) positive regulation of relaxation of cardiac muscle(GO:1901899) regulation of dense core granule biogenesis(GO:2000705)
0.0 0.1 GO:0007493 endodermal cell fate determination(GO:0007493)
0.0 0.1 GO:1904059 regulation of locomotor rhythm(GO:1904059)
0.0 0.2 GO:0060385 axonogenesis involved in innervation(GO:0060385)
0.0 0.1 GO:2000253 positive regulation of feeding behavior(GO:2000253)
0.0 0.1 GO:0048749 compound eye development(GO:0048749)
0.0 0.2 GO:0046543 development of secondary female sexual characteristics(GO:0046543)
0.0 0.1 GO:0008063 Toll signaling pathway(GO:0008063)
0.0 0.1 GO:0051461 positive regulation of corticotropin secretion(GO:0051461)
0.0 0.1 GO:0098914 membrane repolarization during atrial cardiac muscle cell action potential(GO:0098914)
0.0 0.0 GO:0099566 regulation of postsynaptic cytosolic calcium ion concentration(GO:0099566)
0.0 0.1 GO:0035881 amacrine cell differentiation(GO:0035881)
0.0 0.1 GO:1900827 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0016035 zeta DNA polymerase complex(GO:0016035)
0.0 0.1 GO:0002177 manchette(GO:0002177)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0008269 JAK pathway signal transduction adaptor activity(GO:0008269)
0.0 0.1 GO:0086089 voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization(GO:0086089)
0.0 0.1 GO:0050509 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity(GO:0050509)
0.0 0.1 GO:0050682 AF-2 domain binding(GO:0050682)
0.0 0.1 GO:0050659 chondroitin 4-sulfotransferase activity(GO:0047756) N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity(GO:0050659)
0.0 0.1 GO:0038025 reelin receptor activity(GO:0038025)
0.0 0.0 GO:0099583 neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583)
0.0 0.0 GO:0048763 calcium-induced calcium release activity(GO:0048763)