Project
A549 cells infected with RSV Analysis Results (GEO series: GSE147507)
Navigation
Downloads
Results for HOXC6_HOXA7
Z-value: 1.12
Motif logo
Transcription factors associated with HOXC6_HOXA7
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| HOXC6 | hg19_v2_chr12_+_54422142_54422239 | 0.90 | 1.0e-01 | Click! |
| HOXA7 | hg19_v2_chr7_-_27196267_27196311 | 0.40 | 6.0e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr16_+_12059091 Show fit | 1.81 |
ENST00000562385.1
|
tumor necrosis factor receptor superfamily, member 17 |
|
| chr4_+_155484103 Show fit | 1.72 |
ENST00000302068.4
|
fibrinogen beta chain |
|
| chr4_+_155484155 Show fit | 1.62 |
ENST00000509493.1
|
fibrinogen beta chain |
|
| chr19_-_36304201 Show fit | 1.35 |
ENST00000301175.3
|
proline dehydrogenase (oxidase) 2 |
|
| chr3_+_149191723 Show fit | 1.26 |
ENST00000305354.4
|
transmembrane 4 L six family member 4 |
|
| chr14_-_94789663 Show fit | 1.23 |
ENST00000557225.1
ENST00000341584.3 |
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 |
|
| chr17_-_64225508 Show fit | 1.12 |
ENST00000205948.6
|
apolipoprotein H (beta-2-glycoprotein I) |
|
| chr10_-_101825151 Show fit | 1.10 |
ENST00000441382.1
|
carboxypeptidase N, polypeptide 1 |
|
| chr6_-_109702885 Show fit | 0.97 |
ENST00000504373.1
|
CD164 molecule, sialomucin |
|
| chr17_+_1674982 Show fit | 0.85 |
ENST00000572048.1
ENST00000573763.1 |
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of HOXC6_HOXA7
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 3.3 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
| 0.0 | 1.8 | GO:0002260 | lymphocyte homeostasis(GO:0002260) |
| 0.2 | 1.4 | GO:0010133 | proline catabolic process(GO:0006562) proline catabolic process to glutamate(GO:0010133) |
| 0.0 | 1.2 | GO:0008211 | glucocorticoid metabolic process(GO:0008211) |
| 0.4 | 1.1 | GO:0030070 | insulin processing(GO:0030070) |
| 0.1 | 1.1 | GO:0034196 | acylglycerol transport(GO:0034196) triglyceride transport(GO:0034197) |
| 0.0 | 1.1 | GO:0042246 | tissue regeneration(GO:0042246) |
| 0.0 | 1.0 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157) |
| 0.1 | 0.8 | GO:0071279 | cellular response to cobalt ion(GO:0071279) |
| 0.2 | 0.7 | GO:0002416 | IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor(GO:0002416) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 3.3 | GO:0005577 | fibrinogen complex(GO:0005577) |
| 0.1 | 1.1 | GO:0031089 | platelet dense granule lumen(GO:0031089) |
| 0.0 | 0.8 | GO:0043203 | axon hillock(GO:0043203) |
| 0.1 | 0.7 | GO:0098647 | collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647) |
| 0.0 | 0.6 | GO:0070652 | HAUS complex(GO:0070652) |
| 0.0 | 0.6 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
| 0.1 | 0.4 | GO:0042720 | mitochondrial inner membrane peptidase complex(GO:0042720) |
| 0.0 | 0.4 | GO:0098643 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
| 0.0 | 0.4 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
| 0.0 | 0.3 | GO:0005689 | U12-type spliceosomal complex(GO:0005689) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 3.2 | GO:0051087 | chaperone binding(GO:0051087) |
| 0.3 | 1.4 | GO:0004657 | proline dehydrogenase activity(GO:0004657) |
| 0.0 | 1.3 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
| 0.4 | 1.1 | GO:0060230 | lipoprotein lipase activator activity(GO:0060230) |
| 0.1 | 1.1 | GO:0004185 | serine-type carboxypeptidase activity(GO:0004185) |
| 0.1 | 0.7 | GO:0019770 | IgG receptor activity(GO:0019770) |
| 0.1 | 0.6 | GO:0032217 | riboflavin transporter activity(GO:0032217) |
| 0.1 | 0.6 | GO:0043423 | 3-phosphoinositide-dependent protein kinase binding(GO:0043423) |
| 0.0 | 0.6 | GO:0000062 | fatty-acyl-CoA binding(GO:0000062) |
| 0.1 | 0.5 | GO:0033188 | sphingomyelin synthase activity(GO:0033188) ceramide cholinephosphotransferase activity(GO:0047493) |
Gene overrepresentation in C2:CP category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 3.3 | PID EPHRINB REV PATHWAY | Ephrin B reverse signaling |
| 0.0 | 0.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
| 0.0 | 0.7 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
Gene overrepresentation in C2:CP:REACTOME category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 3.3 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
| 0.0 | 0.7 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
| 0.0 | 0.7 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
| 0.0 | 0.6 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |