A549 cells infected with RSV Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GLI3 | hg19_v2_chr7_-_42276612_42276782 | 0.36 | 6.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_-_50970919 Show fit | 1.36 |
ENST00000329363.4
ENST00000437588.1 |
outer dense fiber of sperm tails 3B |
|
chr22_-_50970566 Show fit | 1.14 |
ENST00000405135.1
ENST00000401779.1 |
outer dense fiber of sperm tails 3B |
|
chr12_+_113354341 Show fit | 1.06 |
ENST00000553152.1
|
2'-5'-oligoadenylate synthetase 1, 40/46kDa |
|
chr18_+_21529811 Show fit | 1.02 |
ENST00000588004.1
|
laminin, alpha 3 |
|
chr1_+_183155373 Show fit | 0.98 |
ENST00000493293.1
ENST00000264144.4 |
laminin, gamma 2 |
|
chr17_+_41158742 Show fit | 0.92 |
ENST00000415816.2
ENST00000438323.2 |
interferon-induced protein 35 |
|
chr1_+_28206150 Show fit | 0.90 |
ENST00000456990.1
|
thymocyte selection associated family member 2 |
|
chr6_-_169563013 Show fit | 0.81 |
ENST00000439703.1
|
RP11-417E7.1 |
|
chr22_-_24622080 Show fit | 0.79 |
ENST00000425408.1
|
gamma-glutamyltransferase 5 |
|
chr19_-_35981358 Show fit | 0.77 |
ENST00000484218.2
ENST00000338897.3 |
keratinocyte differentiation-associated protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | GO:0071357 | type I interferon signaling pathway(GO:0060337) cellular response to type I interferon(GO:0071357) |
0.1 | 2.6 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.5 | 1.8 | GO:0021966 | corticospinal neuron axon guidance(GO:0021966) |
0.3 | 1.2 | GO:0010900 | negative regulation of phosphatidylcholine catabolic process(GO:0010900) |
0.1 | 1.0 | GO:0010609 | mRNA localization resulting in posttranscriptional regulation of gene expression(GO:0010609) regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902162) positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902164) |
0.2 | 0.8 | GO:0052027 | modulation of signal transduction in other organism(GO:0044501) modulation by symbiont of host signal transduction pathway(GO:0052027) modulation of signal transduction in other organism involved in symbiotic interaction(GO:0052250) modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade(GO:0085032) |
0.1 | 0.8 | GO:0006021 | inositol biosynthetic process(GO:0006021) |
0.0 | 0.8 | GO:0071294 | cellular response to zinc ion(GO:0071294) |
0.2 | 0.7 | GO:1990736 | positive regulation of regulation of vascular smooth muscle cell membrane depolarization(GO:1904199) regulation of vascular smooth muscle cell membrane depolarization(GO:1990736) |
0.1 | 0.7 | GO:0050689 | negative regulation of defense response to virus by host(GO:0050689) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | GO:0001518 | voltage-gated sodium channel complex(GO:0001518) |
0.0 | 1.3 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.0 | 1.3 | GO:1904724 | tertiary granule lumen(GO:1904724) |
0.0 | 1.3 | GO:0005637 | nuclear inner membrane(GO:0005637) |
0.1 | 1.2 | GO:0005610 | laminin-5 complex(GO:0005610) |
0.1 | 1.1 | GO:0042627 | chylomicron(GO:0042627) |
0.2 | 1.0 | GO:0005607 | laminin-2 complex(GO:0005607) |
0.1 | 0.9 | GO:0035749 | myelin sheath adaxonal region(GO:0035749) |
0.0 | 0.8 | GO:0005796 | Golgi lumen(GO:0005796) |
0.1 | 0.7 | GO:0034706 | sodium channel complex(GO:0034706) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 1.8 | GO:0086062 | voltage-gated sodium channel activity involved in Purkinje myocyte action potential(GO:0086062) |
0.0 | 1.8 | GO:0005227 | calcium activated cation channel activity(GO:0005227) |
0.2 | 1.1 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
0.1 | 1.1 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.1 | 1.1 | GO:0046703 | natural killer cell lectin-like receptor binding(GO:0046703) |
0.0 | 1.1 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 0.9 | GO:0005112 | Notch binding(GO:0005112) |
0.0 | 0.9 | GO:0051019 | mitogen-activated protein kinase binding(GO:0051019) |
0.3 | 0.8 | GO:0008441 | 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441) |
0.2 | 0.8 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.2 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.1 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.0 | 1.1 | PID EPO PATHWAY | EPO signaling pathway |
0.0 | 0.9 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
0.0 | 0.7 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 0.7 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
0.0 | 0.5 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.5 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.4 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.0 | 3.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.0 | 1.3 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 1.0 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.0 | 0.9 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.0 | 0.8 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.0 | 0.8 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 0.8 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 0.7 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.6 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |