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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for CAGUCCA

Z-value: 0.27

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miRNA associated with seed CAGUCCA

NamemiRBASE accession
hsa-miR-455-3p.1
MIMAT0004784

Activity profile of CAGUCCA motif

Sorted Z-values of CAGUCCA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr1_+_203274639 0.15 ENST00000290551.4
BTG2
BTG family, member 2
chr4_+_174089904 0.14 ENST00000265000.4
GALNT7
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
chr1_-_146644122 0.14 ENST00000254101.3
PRKAB2
protein kinase, AMP-activated, beta 2 non-catalytic subunit
chr8_-_91658303 0.11 ENST00000458549.2
TMEM64
transmembrane protein 64
chr2_-_55237484 0.10 ENST00000394609.2
RTN4
reticulon 4
chr6_-_29527702 0.10 ENST00000377050.4
UBD
ubiquitin D
chr14_-_100070363 0.09 ENST00000380243.4
CCDC85C
coiled-coil domain containing 85C
chr15_+_49170083 0.09 ENST00000530028.2
EID1
EP300 interacting inhibitor of differentiation 1
chr5_+_65018017 0.09 ENST00000380985.5
ENST00000502464.1
NLN
neurolysin (metallopeptidase M3 family)
chr5_+_60628074 0.09 ENST00000252744.5
ZSWIM6
zinc finger, SWIM-type containing 6
chr3_-_37034702 0.08 ENST00000322716.5
EPM2AIP1
EPM2A (laforin) interacting protein 1
chr1_-_54304212 0.08 ENST00000540001.1
NDC1
NDC1 transmembrane nucleoporin
chr1_+_201979645 0.08 ENST00000367284.5
ENST00000367283.3
ELF3
E74-like factor 3 (ets domain transcription factor, epithelial-specific )
chr3_+_124223586 0.08 ENST00000393496.1
KALRN
kalirin, RhoGEF kinase
chr9_+_103204553 0.08 ENST00000502978.1
ENST00000334943.6
MSANTD3-TMEFF1
TMEFF1
MSANTD3-TMEFF1 readthrough
transmembrane protein with EGF-like and two follistatin-like domains 1
chr8_-_103876965 0.08 ENST00000337198.5
AZIN1
antizyme inhibitor 1
chr5_+_67511524 0.08 ENST00000521381.1
ENST00000521657.1
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr6_-_111136513 0.08 ENST00000368911.3
CDK19
cyclin-dependent kinase 19
chr19_+_47421933 0.07 ENST00000404338.3
ARHGAP35
Rho GTPase activating protein 35
chr15_+_96873921 0.07 ENST00000394166.3
NR2F2
nuclear receptor subfamily 2, group F, member 2
chr17_-_46671323 0.07 ENST00000239151.5
HOXB5
homeobox B5
chr5_+_92919043 0.07 ENST00000327111.3
NR2F1
nuclear receptor subfamily 2, group F, member 1
chr9_-_104145795 0.06 ENST00000259407.2
BAAT
bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
chr17_-_48943706 0.06 ENST00000499247.2
TOB1
transducer of ERBB2, 1
chr19_+_8274204 0.06 ENST00000561053.1
ENST00000251363.5
ENST00000559450.1
ENST00000559336.1
CERS4
ceramide synthase 4
chr6_-_10415470 0.06 ENST00000379604.2
ENST00000379613.3
TFAP2A
transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
chr9_+_103235365 0.06 ENST00000374879.4
TMEFF1
transmembrane protein with EGF-like and two follistatin-like domains 1
chr1_-_150979333 0.05 ENST00000312210.5
FAM63A
family with sequence similarity 63, member A
chr8_-_91997427 0.05 ENST00000517562.2
RP11-122A3.2
chromosome 8 open reading frame 88
chr13_+_88324870 0.05 ENST00000325089.6
SLITRK5
SLIT and NTRK-like family, member 5
chr12_-_90049828 0.05 ENST00000261173.2
ENST00000348959.3
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1
chr15_+_41952591 0.05 ENST00000566718.1
ENST00000219905.7
ENST00000389936.4
ENST00000545763.1
MGA
MGA, MAX dimerization protein
chr4_-_99851766 0.05 ENST00000450253.2
EIF4E
eukaryotic translation initiation factor 4E
chr2_-_61765315 0.05 ENST00000406957.1
ENST00000401558.2
XPO1
exportin 1 (CRM1 homolog, yeast)
chr11_+_14665263 0.05 ENST00000282096.4
PDE3B
phosphodiesterase 3B, cGMP-inhibited
chr16_-_18937726 0.05 ENST00000389467.3
ENST00000446231.2
SMG1
SMG1 phosphatidylinositol 3-kinase-related kinase
chr12_+_53848505 0.05 ENST00000552819.1
ENST00000455667.3
PCBP2
poly(rC) binding protein 2
chr1_-_40105617 0.05 ENST00000372852.3
HEYL
hes-related family bHLH transcription factor with YRPW motif-like
chr4_+_124320665 0.05 ENST00000394339.2
SPRY1
sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr9_+_100745615 0.05 ENST00000339399.4
ANP32B
acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
chr19_+_45973120 0.05 ENST00000592811.1
ENST00000586615.1
FOSB
FBJ murine osteosarcoma viral oncogene homolog B
chr2_-_172290482 0.04 ENST00000442541.1
ENST00000392599.2
ENST00000375258.4
METTL8
methyltransferase like 8
chr14_-_53258314 0.04 ENST00000216410.3
ENST00000557604.1
GNPNAT1
glucosamine-phosphate N-acetyltransferase 1
chrX_+_16804544 0.04 ENST00000380122.5
ENST00000398155.4
TXLNG
taxilin gamma
chr6_+_147830063 0.04 ENST00000367474.1
SAMD5
sterile alpha motif domain containing 5
chr10_+_98592009 0.04 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr4_-_100871506 0.04 ENST00000296417.5
H2AFZ
H2A histone family, member Z
chr1_+_153700518 0.04 ENST00000318967.2
ENST00000456435.1
ENST00000435409.2
INTS3
integrator complex subunit 3
chr2_+_48010221 0.04 ENST00000234420.5
MSH6
mutS homolog 6
chr3_-_182698381 0.04 ENST00000292782.4
DCUN1D1
DCN1, defective in cullin neddylation 1, domain containing 1
chr2_+_157291953 0.04 ENST00000310454.6
GPD2
glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
chr1_+_27153173 0.04 ENST00000374142.4
ZDHHC18
zinc finger, DHHC-type containing 18
chr5_+_137673945 0.04 ENST00000513056.1
ENST00000511276.1
FAM53C
family with sequence similarity 53, member C
chr17_+_56160768 0.04 ENST00000579991.2
DYNLL2
dynein, light chain, LC8-type 2
chr10_-_60027642 0.04 ENST00000373935.3
IPMK
inositol polyphosphate multikinase
chr11_-_129062093 0.04 ENST00000310343.9
ARHGAP32
Rho GTPase activating protein 32
chr8_+_22224811 0.04 ENST00000381237.1
SLC39A14
solute carrier family 39 (zinc transporter), member 14
chr7_-_75988321 0.03 ENST00000307630.3
YWHAG
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
chr16_+_22217577 0.03 ENST00000263026.5
EEF2K
eukaryotic elongation factor-2 kinase
chr14_-_64010046 0.03 ENST00000337537.3
PPP2R5E
protein phosphatase 2, regulatory subunit B', epsilon isoform
chr15_+_45315302 0.03 ENST00000267814.9
SORD
sorbitol dehydrogenase
chr12_+_54447637 0.03 ENST00000609810.1
ENST00000430889.2
HOXC4
HOXC4
homeobox C4
Homeobox protein Hox-C4
chr17_+_57697216 0.03 ENST00000393043.1
ENST00000269122.3
CLTC
clathrin, heavy chain (Hc)
chr12_-_27091183 0.03 ENST00000544548.1
ENST00000261191.7
ENST00000537336.1
ASUN
asunder spermatogenesis regulator
chr15_+_41851211 0.03 ENST00000263798.3
TYRO3
TYRO3 protein tyrosine kinase
chr4_-_71705590 0.03 ENST00000254799.6
GRSF1
G-rich RNA sequence binding factor 1
chr11_-_45307817 0.03 ENST00000020926.3
SYT13
synaptotagmin XIII
chr14_+_57857262 0.02 ENST00000555166.1
ENST00000556492.1
ENST00000554703.1
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit
chr20_+_306221 0.02 ENST00000342665.2
SOX12
SRY (sex determining region Y)-box 12
chr1_-_40367530 0.02 ENST00000372816.2
ENST00000372815.1
MYCL
v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
chr8_+_26149007 0.02 ENST00000380737.3
ENST00000524169.1
PPP2R2A
protein phosphatase 2, regulatory subunit B, alpha
chr1_-_33338076 0.02 ENST00000496770.1
FNDC5
fibronectin type III domain containing 5
chr10_-_71930222 0.02 ENST00000458634.2
ENST00000373239.2
ENST00000373242.2
ENST00000373241.4
SAR1A
SAR1 homolog A (S. cerevisiae)
chr15_+_76135622 0.02 ENST00000338677.4
ENST00000267938.4
ENST00000569423.1
UBE2Q2
ubiquitin-conjugating enzyme E2Q family member 2
chr11_-_118305921 0.02 ENST00000532619.1
RP11-770J1.4
RP11-770J1.4
chr1_-_17766198 0.02 ENST00000375436.4
RCC2
regulator of chromosome condensation 2
chr11_+_125439298 0.02 ENST00000278903.6
ENST00000343678.4
ENST00000524723.1
ENST00000527842.2
EI24
etoposide induced 2.4
chr12_+_68042495 0.02 ENST00000344096.3
DYRK2
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr3_+_196466710 0.02 ENST00000327134.3
PAK2
p21 protein (Cdc42/Rac)-activated kinase 2
chrX_+_133507327 0.02 ENST00000332070.3
ENST00000394292.1
ENST00000370799.1
ENST00000416404.2
PHF6
PHD finger protein 6
chr13_-_50367057 0.02 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr8_+_22409193 0.02 ENST00000240123.7
SORBS3
sorbin and SH3 domain containing 3
chrX_+_48554986 0.02 ENST00000376687.3
ENST00000453214.2
SUV39H1
suppressor of variegation 3-9 homolog 1 (Drosophila)
chr21_+_47878757 0.02 ENST00000400274.1
ENST00000427143.2
ENST00000318711.7
ENST00000457905.3
ENST00000466639.1
ENST00000435722.3
ENST00000417564.2
DIP2A
DIP2 disco-interacting protein 2 homolog A (Drosophila)
chr15_+_49715293 0.02 ENST00000267843.4
ENST00000560270.1
FGF7
fibroblast growth factor 7
chr17_-_41977964 0.02 ENST00000377184.3
MPP2
membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
chr14_+_23775971 0.02 ENST00000250405.5
BCL2L2
BCL2-like 2
chr3_+_25469724 0.02 ENST00000437042.2
RARB
retinoic acid receptor, beta
chr9_+_115513003 0.02 ENST00000374232.3
SNX30
sorting nexin family member 30
chr13_-_45915221 0.02 ENST00000309246.5
ENST00000379060.4
ENST00000379055.1
ENST00000527226.1
ENST00000379056.1
TPT1
tumor protein, translationally-controlled 1
chr16_-_46865047 0.02 ENST00000394806.2
C16orf87
chromosome 16 open reading frame 87
chr3_+_9773409 0.02 ENST00000433861.2
ENST00000424362.1
ENST00000383829.2
ENST00000302054.3
ENST00000420291.1
BRPF1
bromodomain and PHD finger containing, 1
chr2_-_197036289 0.02 ENST00000263955.4
STK17B
serine/threonine kinase 17b
chr11_-_82782861 0.02 ENST00000524635.1
ENST00000526205.1
ENST00000527633.1
ENST00000533486.1
ENST00000533276.2
RAB30
RAB30, member RAS oncogene family
chr17_-_16395455 0.01 ENST00000409083.3
FAM211A
family with sequence similarity 211, member A
chr17_-_48227877 0.01 ENST00000316878.6
PPP1R9B
protein phosphatase 1, regulatory subunit 9B
chr5_-_159546396 0.01 ENST00000523662.1
ENST00000456329.3
ENST00000307063.7
PWWP2A
PWWP domain containing 2A
chr19_+_19496624 0.01 ENST00000494516.2
ENST00000360315.3
ENST00000252577.5
GATAD2A
GATA zinc finger domain containing 2A
chr11_-_134281812 0.01 ENST00000392580.1
ENST00000312527.4
B3GAT1
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr16_+_12995468 0.01 ENST00000424107.3
ENST00000558583.1
ENST00000558318.1
SHISA9
shisa family member 9
chr10_+_88516396 0.01 ENST00000372037.3
BMPR1A
bone morphogenetic protein receptor, type IA
chrX_+_69664706 0.01 ENST00000194900.4
ENST00000374360.3
DLG3
discs, large homolog 3 (Drosophila)
chr3_-_11762202 0.01 ENST00000445411.1
ENST00000404339.1
ENST00000273038.3
VGLL4
vestigial like 4 (Drosophila)
chrX_+_153639856 0.01 ENST00000426834.1
ENST00000369790.4
ENST00000454722.1
ENST00000350743.4
ENST00000299328.5
ENST00000351413.4
TAZ
tafazzin
chr17_-_7120525 0.01 ENST00000447163.1
ENST00000399506.2
ENST00000302955.6
DLG4
discs, large homolog 4 (Drosophila)
chr5_-_76935513 0.01 ENST00000306422.3
OTP
orthopedia homeobox
chr7_+_69064300 0.01 ENST00000342771.4
AUTS2
autism susceptibility candidate 2
chr2_-_73298802 0.01 ENST00000411783.1
ENST00000410065.1
ENST00000442582.1
ENST00000272433.2
SFXN5
sideroflexin 5
chr7_+_73242069 0.01 ENST00000435050.1
CLDN4
claudin 4
chr15_+_44719394 0.01 ENST00000260327.4
ENST00000396780.1
CTDSPL2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr3_-_132004251 0.01 ENST00000512055.1
CPNE4
copine IV
chr12_-_71148413 0.01 ENST00000440835.2
ENST00000549308.1
ENST00000550661.1
PTPRR
protein tyrosine phosphatase, receptor type, R
chr2_+_85360499 0.01 ENST00000282111.3
TCF7L1
transcription factor 7-like 1 (T-cell specific, HMG-box)
chr10_-_33246722 0.01 ENST00000437302.1
ENST00000396033.2
ITGB1
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
chr20_-_656823 0.01 ENST00000246104.6
SCRT2
scratch family zinc finger 2
chr3_+_183903811 0.01 ENST00000429586.2
ENST00000292808.5
ABCF3
ATP-binding cassette, sub-family F (GCN20), member 3
chr15_+_90931450 0.01 ENST00000268182.5
ENST00000560738.1
ENST00000560418.1
IQGAP1
IQ motif containing GTPase activating protein 1
chr2_+_61404624 0.01 ENST00000394457.3
AHSA2
AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
chr5_+_56111361 0.01 ENST00000399503.3
MAP3K1
mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
chr3_-_128902729 0.01 ENST00000451728.2
ENST00000446936.2
ENST00000502976.1
ENST00000500450.2
ENST00000441626.2
CNBP
CCHC-type zinc finger, nucleic acid binding protein
chr2_+_27440229 0.01 ENST00000264705.4
ENST00000403525.1
CAD
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
chr14_+_58666824 0.01 ENST00000254286.4
ACTR10
actin-related protein 10 homolog (S. cerevisiae)
chr1_+_75594119 0.01 ENST00000294638.5
LHX8
LIM homeobox 8
chr3_+_38495333 0.01 ENST00000352511.4
ACVR2B
activin A receptor, type IIB
chr9_+_4679555 0.01 ENST00000381858.1
ENST00000381854.3
CDC37L1
cell division cycle 37-like 1
chr8_-_30670384 0.01 ENST00000221138.4
ENST00000518243.1
PPP2CB
protein phosphatase 2, catalytic subunit, beta isozyme
chr6_-_17706618 0.01 ENST00000262077.2
ENST00000537253.1
NUP153
nucleoporin 153kDa
chr2_+_232651124 0.00 ENST00000350033.3
ENST00000412591.1
ENST00000410017.1
ENST00000373608.3
COPS7B
COP9 signalosome subunit 7B
chr2_+_105471969 0.00 ENST00000361360.2
POU3F3
POU class 3 homeobox 3
chrX_-_134049262 0.00 ENST00000370783.3
MOSPD1
motile sperm domain containing 1
chrX_-_25034065 0.00 ENST00000379044.4
ARX
aristaless related homeobox
chr7_-_152133059 0.00 ENST00000262189.6
ENST00000355193.2
KMT2C
lysine (K)-specific methyltransferase 2C
chr6_-_90529418 0.00 ENST00000439638.1
ENST00000369393.3
ENST00000428876.1
MDN1
MDN1, midasin homolog (yeast)
chr2_-_131850951 0.00 ENST00000409185.1
ENST00000389915.3
FAM168B
family with sequence similarity 168, member B
chr15_-_100273544 0.00 ENST00000409796.1
ENST00000545021.1
ENST00000344791.2
ENST00000332728.4
ENST00000450512.1
LYSMD4
LysM, putative peptidoglycan-binding, domain containing 4
chr1_-_213189108 0.00 ENST00000535388.1
ANGEL2
angel homolog 2 (Drosophila)
chr12_+_98987369 0.00 ENST00000401722.3
ENST00000188376.5
ENST00000228318.3
ENST00000551917.1
ENST00000548046.1
ENST00000552981.1
ENST00000551265.1
ENST00000550695.1
ENST00000547534.1
ENST00000549338.1
ENST00000548847.1
SLC25A3
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
chr18_-_29522989 0.00 ENST00000582539.1
ENST00000283351.4
ENST00000582513.1
TRAPPC8
trafficking protein particle complex 8

Network of associatons between targets according to the STRING database.

First level regulatory network of CAGUCCA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0071790 spindle pole body duplication(GO:0030474) spindle pole body organization(GO:0051300) spindle pole body localization(GO:0070631) establishment of spindle pole body localization(GO:0070632) spindle pole body localization to nuclear envelope(GO:0071789) establishment of spindle pole body localization to nuclear envelope(GO:0071790)
0.0 0.1 GO:1902809 regulation of skeletal muscle fiber differentiation(GO:1902809)
0.0 0.1 GO:1902269 positive regulation of polyamine transmembrane transport(GO:1902269)
0.0 0.1 GO:0044339 canonical Wnt signaling pathway involved in osteoblast differentiation(GO:0044339)
0.0 0.1 GO:0009956 radial pattern formation(GO:0009956)
0.0 0.0 GO:2000824 negative regulation of androgen receptor activity(GO:2000824)
0.0 0.0 GO:0051387 negative regulation of neurotrophin TRK receptor signaling pathway(GO:0051387) epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.0 0.1 GO:0003409 optic cup structural organization(GO:0003409) oculomotor nerve morphogenesis(GO:0021622) oculomotor nerve formation(GO:0021623)
0.0 0.0 GO:0034059 response to anoxia(GO:0034059)
0.0 0.0 GO:0006059 hexitol metabolic process(GO:0006059)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070762 nuclear pore transmembrane ring(GO:0070762)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0035034 histone acetyltransferase regulator activity(GO:0035034)
0.0 0.0 GO:0004119 cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119)
0.0 0.0 GO:0035939 microsatellite binding(GO:0035939)
0.0 0.1 GO:0042978 ornithine decarboxylase activator activity(GO:0042978)