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A549 cells infected with RSV Analysis Results (GEO series: GSE147507)

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Results for AAUGCCC

Z-value: 0.58

Motif logo

miRNA associated with seed AAUGCCC

NamemiRBASE accession
MIMAT0000710
MIMAT0022834

Activity profile of AAUGCCC motif

Sorted Z-values of AAUGCCC motif

Promoter Log-likelihood Transcript Gene Gene Info
chr17_+_68165657 1.44 ENST00000243457.3
potassium inwardly-rectifying channel, subfamily J, member 2
chr2_+_155554797 0.56 ENST00000295101.2
potassium inwardly-rectifying channel, subfamily J, member 3
chr2_-_153574480 0.22 ENST00000410080.1
PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
chr15_+_52121822 0.22 ENST00000558455.1
ENST00000308580.7
tropomodulin 3 (ubiquitous)
chr3_+_51575596 0.18 ENST00000409535.2
RAD54-like 2 (S. cerevisiae)
chr2_+_46926048 0.18 ENST00000306503.5
suppressor of cytokine signaling 5
chr2_-_64881018 0.16 ENST00000313349.3
SERTA domain containing 2
chr5_-_39074479 0.16 ENST00000514735.1
ENST00000296782.5
ENST00000357387.3
RPTOR independent companion of MTOR, complex 2
chr5_-_142065612 0.16 ENST00000360966.5
ENST00000411960.1
fibroblast growth factor 1 (acidic)
chr8_-_82598511 0.15 ENST00000449740.2
ENST00000311489.4
ENST00000521360.1
ENST00000519964.1
ENST00000518202.1
inositol(myo)-1(or 4)-monophosphatase 1
chr3_+_23986748 0.15 ENST00000312521.4
nuclear receptor subfamily 1, group D, member 2
chr2_+_61108650 0.12 ENST00000295025.8
v-rel avian reticuloendotheliosis viral oncogene homolog
chr2_-_200322723 0.12 ENST00000417098.1
SATB homeobox 2
chr8_+_67579807 0.12 ENST00000519289.1
ENST00000519561.1
ENST00000521889.1
C8orf44-SGK3 readthrough
chromosome 8 open reading frame 44
chr1_-_244013384 0.12 ENST00000366539.1
v-akt murine thymoma viral oncogene homolog 3
chr5_-_90679145 0.12 ENST00000265138.3
arrestin domain containing 3
chr1_-_78225482 0.12 ENST00000524778.1
ENST00000370794.3
ENST00000370793.1
ENST00000370792.3
ubiquitin specific peptidase 33
chr1_+_2160134 0.11 ENST00000378536.4
v-ski avian sarcoma viral oncogene homolog
chr20_+_56884752 0.10 ENST00000244040.3
RAB22A, member RAS oncogene family
chr2_-_180129484 0.10 ENST00000428443.3
SEC14 and spectrin domains 1
chr2_+_179345173 0.09 ENST00000234453.5
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
chr5_+_172483347 0.09 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
CREB3 regulatory factor
chr1_+_97187318 0.09 ENST00000609116.1
ENST00000370198.1
ENST00000370197.1
ENST00000426398.2
ENST00000394184.3
polypyrimidine tract binding protein 2
chr2_-_183903133 0.09 ENST00000361354.4
NCK-associated protein 1
chr1_-_22109682 0.09 ENST00000400301.1
ENST00000532737.1
ubiquitin specific peptidase 48
chr8_-_38239732 0.09 ENST00000534155.1
ENST00000433384.2
ENST00000317025.8
ENST00000316985.3
Wolf-Hirschhorn syndrome candidate 1-like 1
chr15_+_68346501 0.09 ENST00000249636.6
protein inhibitor of activated STAT, 1
chr3_-_123603137 0.09 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
myosin light chain kinase
chr4_-_11431389 0.09 ENST00000002596.5
heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr8_+_124780672 0.09 ENST00000521166.1
ENST00000334705.7
family with sequence similarity 91, member A1
chr7_-_151217001 0.08 ENST00000262187.5
Ras homolog enriched in brain
chr10_-_105615164 0.08 ENST00000355946.2
ENST00000369774.4
SH3 and PX domains 2A
chr4_-_103748880 0.08 ENST00000453744.2
ENST00000349311.8
ubiquitin-conjugating enzyme E2D 3
chr12_-_75905374 0.08 ENST00000438169.2
ENST00000229214.4
KRR1, small subunit (SSU) processome component, homolog (yeast)
chr3_-_113465065 0.08 ENST00000497255.1
ENST00000478020.1
ENST00000240922.3
ENST00000493900.1
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr4_+_38665810 0.07 ENST00000261438.5
ENST00000514033.1
Kruppel-like factor 3 (basic)
chr13_-_21476900 0.07 ENST00000400602.2
ENST00000255305.6
exportin 4
chr10_-_98346801 0.07 ENST00000371142.4
transmembrane 9 superfamily member 3
chr10_-_62149433 0.07 ENST00000280772.2
ankyrin 3, node of Ranvier (ankyrin G)
chr8_+_128426535 0.07 ENST00000465342.2
POU class 5 homeobox 1B
chr11_-_57283159 0.07 ENST00000533263.1
ENST00000278426.3
solute carrier family 43 (amino acid system L transporter), member 1
chr3_+_171758344 0.06 ENST00000336824.4
ENST00000423424.1
fibronectin type III domain containing 3B
chr12_-_31479045 0.06 ENST00000539409.1
ENST00000395766.1
family with sequence similarity 60, member A
chr5_-_142783175 0.06 ENST00000231509.3
ENST00000394464.2
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
chr22_+_32340481 0.06 ENST00000397492.1
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
chr7_+_94285637 0.06 ENST00000482108.1
ENST00000488574.1
paternally expressed 10
chr1_-_28415204 0.06 ENST00000373871.3
eyes absent homolog 3 (Drosophila)
chr5_-_89825328 0.06 ENST00000500869.2
ENST00000315948.6
ENST00000509384.1
LysM, putative peptidoglycan-binding, domain containing 3
chr10_+_89622870 0.06 ENST00000371953.3
phosphatase and tensin homolog
chrX_-_19988382 0.06 ENST00000356980.3
ENST00000379687.3
ENST00000379682.4
chromosome X open reading frame 23
chr11_+_34642656 0.05 ENST00000257831.3
ENST00000450654.2
ets homologous factor
chr2_-_157189180 0.05 ENST00000539077.1
ENST00000424077.1
ENST00000426264.1
ENST00000339562.4
ENST00000421709.1
nuclear receptor subfamily 4, group A, member 2
chr7_+_139044621 0.05 ENST00000354926.4
C7orf55-LUC7L2 readthrough
chr15_+_96873921 0.05 ENST00000394166.3
nuclear receptor subfamily 2, group F, member 2
chr5_+_122181184 0.05 ENST00000513881.1
sorting nexin 24
chr18_+_56338618 0.05 ENST00000348428.3
mucosa associated lymphoid tissue lymphoma translocation gene 1
chr2_-_190649082 0.05 ENST00000392350.3
ENST00000392349.4
ORM1-like 1 (S. cerevisiae)
chr8_+_59323823 0.05 ENST00000399598.2
UBX domain protein 2B
chr8_+_54764346 0.05 ENST00000297313.3
ENST00000344277.6
regulator of G-protein signaling 20
chr3_-_48885228 0.05 ENST00000454963.1
ENST00000296446.8
ENST00000419216.1
ENST00000265563.8
protein kinase, cAMP-dependent, regulatory, type II, alpha
chr4_+_41992489 0.05 ENST00000264451.7
solute carrier family 30 (zinc transporter), member 9
chr12_+_72666407 0.05 ENST00000261180.4
thyrotropin-releasing hormone degrading enzyme
chr3_+_101292939 0.05 ENST00000265260.3
ENST00000469941.1
ENST00000296024.5
PEST proteolytic signal containing nuclear protein
chr3_+_38495333 0.05 ENST00000352511.4
activin A receptor, type IIB
chr2_-_39348137 0.05 ENST00000426016.1
son of sevenless homolog 1 (Drosophila)
chr6_+_16129308 0.04 ENST00000356840.3
ENST00000349606.4
myosin regulatory light chain interacting protein
chr7_+_138145076 0.04 ENST00000343526.4
tripartite motif containing 24
chr3_-_79068594 0.04 ENST00000436010.2
roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr9_-_6007787 0.04 ENST00000399933.3
ENST00000381461.2
ENST00000513355.2
KIAA2026
chr10_+_22610124 0.04 ENST00000376663.3
BMI1 polycomb ring finger oncogene
chr9_+_116638562 0.04 ENST00000374126.5
ENST00000288466.7
zinc finger protein 618
chr12_-_67072714 0.04 ENST00000545666.1
ENST00000398016.3
ENST00000359742.4
ENST00000286445.7
ENST00000538211.1
glutamate receptor interacting protein 1
chr1_-_91487013 0.04 ENST00000347275.5
ENST00000370440.1
zinc finger protein 644
chr15_+_41523335 0.04 ENST00000334660.5
calcineurin-like EF-hand protein 1
chr10_+_180987 0.04 ENST00000381591.1
zinc finger, MYND-type containing 11
chr1_-_155881156 0.04 ENST00000539040.1
ENST00000368323.3
Ras-like without CAAX 1
chr5_-_59189545 0.04 ENST00000340635.6
phosphodiesterase 4D, cAMP-specific
chr13_+_114238997 0.04 ENST00000538138.1
ENST00000375370.5
transcription factor Dp-1
chr1_+_29063271 0.04 ENST00000373812.3
YTH domain family, member 2
chr11_-_31839488 0.03 ENST00000419022.1
ENST00000379132.3
ENST00000379129.2
paired box 6
chr9_-_136933134 0.03 ENST00000303407.7
bromodomain containing 3
chr2_+_192542850 0.03 ENST00000410026.2
nucleic acid binding protein 1
chr12_+_68042495 0.03 ENST00000344096.3
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr1_-_153588334 0.03 ENST00000476873.1
S100 calcium binding protein A14
chr1_-_35658736 0.03 ENST00000357214.5
splicing factor proline/glutamine-rich
chr14_-_23526739 0.03 ENST00000397359.3
ENST00000487137.2
cadherin 24, type 2
chr4_-_74124502 0.03 ENST00000358602.4
ENST00000330838.6
ENST00000561029.1
ankyrin repeat domain 17
chr18_+_43753974 0.03 ENST00000282059.6
ENST00000321319.6
chromosome 18 open reading frame 25
chr10_-_120101804 0.03 ENST00000369183.4
ENST00000369172.4
family with sequence similarity 204, member A
chr3_-_55523966 0.03 ENST00000474267.1
wingless-type MMTV integration site family, member 5A
chr12_-_15942309 0.03 ENST00000544064.1
ENST00000543523.1
ENST00000536793.1
epidermal growth factor receptor pathway substrate 8
chr6_-_88411911 0.03 ENST00000257787.5
akirin 2
chr19_+_33166313 0.03 ENST00000334176.3
regulator of G protein signaling 9 binding protein
chr17_-_48072574 0.03 ENST00000434704.2
distal-less homeobox 3
chr9_+_131445928 0.03 ENST00000372692.4
SET nuclear oncogene
chr9_-_127905736 0.03 ENST00000336505.6
ENST00000373549.4
suppressor of cancer cell invasion
chr9_+_114659046 0.03 ENST00000374279.3
UDP-glucose ceramide glucosyltransferase
chr7_-_27219632 0.03 ENST00000470747.4
Uncharacterized protein
chr17_-_78009647 0.03 ENST00000310924.2
TBC1 domain family, member 16
chr3_-_21792838 0.02 ENST00000281523.2
zinc finger protein 385D
chr17_-_27278304 0.02 ENST00000577226.1
PHD finger protein 12
chr11_-_102714534 0.02 ENST00000299855.5
matrix metallopeptidase 3 (stromelysin 1, progelatinase)
chr11_+_63606373 0.02 ENST00000402010.2
ENST00000315032.8
ENST00000377809.4
ENST00000413835.2
ENST00000377810.3
MAP/microtubule affinity-regulating kinase 2
chrX_-_153979315 0.02 ENST00000369575.3
ENST00000369568.4
ENST00000424127.2
GRB2-associated binding protein 3
chr17_+_55333876 0.02 ENST00000284073.2
musashi RNA-binding protein 2
chr10_+_102505468 0.02 ENST00000361791.3
ENST00000355243.3
ENST00000428433.1
ENST00000370296.2
paired box 2
chrX_-_3631635 0.02 ENST00000262848.5
protein kinase, X-linked
chr1_+_78470530 0.02 ENST00000370763.5
DnaJ (Hsp40) homolog, subfamily B, member 4
chr13_-_53024725 0.02 ENST00000378060.4
vacuolar protein sorting 36 homolog (S. cerevisiae)
chr21_+_38071430 0.02 ENST00000290399.6
single-minded family bHLH transcription factor 2
chr17_-_56084578 0.02 ENST00000582730.2
ENST00000584773.1
ENST00000585096.1
ENST00000258962.4
serine/arginine-rich splicing factor 1
chr2_-_240322643 0.02 ENST00000345617.3
histone deacetylase 4
chr18_-_60987220 0.02 ENST00000398117.1
B-cell CLL/lymphoma 2
chr12_-_66524482 0.02 ENST00000446587.2
ENST00000266604.2
LLP homolog, long-term synaptic facilitation (Aplysia)
chr2_-_43453734 0.02 ENST00000282388.3
ZFP36 ring finger protein-like 2
chr8_-_57906362 0.02 ENST00000262644.4
inositol monophosphatase domain containing 1
chr1_+_145611010 0.02 ENST00000369291.5
ring finger protein 115
chr5_+_148724993 0.01 ENST00000513661.1
ENST00000329271.3
ENST00000416916.2
GrpE-like 2, mitochondrial (E. coli)
chr16_-_67840442 0.01 ENST00000536251.1
ENST00000448631.2
ENST00000602677.1
ENST00000411657.2
ENST00000425512.2
ENST00000317506.3
RAN binding protein 10
chr3_-_33481835 0.01 ENST00000283629.3
upstream binding protein 1 (LBP-1a)
chr10_-_120514720 0.01 ENST00000369151.3
ENST00000340214.4
CDK2-associated, cullin domain 1
chr13_-_46425865 0.01 ENST00000400405.2
siah E3 ubiquitin protein ligase family member 3
chr1_+_64239657 0.01 ENST00000371080.1
ENST00000371079.1
receptor tyrosine kinase-like orphan receptor 1
chr5_-_32444828 0.01 ENST00000265069.8
zinc finger RNA binding protein
chr7_-_141401951 0.01 ENST00000536163.1
KIAA1147
chr10_-_735553 0.01 ENST00000280886.6
ENST00000423550.1
DIP2 disco-interacting protein 2 homolog C (Drosophila)
chr17_+_28804380 0.01 ENST00000225724.5
ENST00000451249.2
ENST00000467337.2
ENST00000581721.1
ENST00000414833.2
golgi SNAP receptor complex member 1
chr21_-_46293586 0.01 ENST00000445724.2
ENST00000397887.3
pituitary tumor-transforming 1 interacting protein
chr14_-_21905395 0.01 ENST00000430710.3
ENST00000553283.1
chromodomain helicase DNA binding protein 8
chr1_-_46598284 0.01 ENST00000423209.1
ENST00000262741.5
phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
chr22_+_21271714 0.01 ENST00000354336.3
v-crk avian sarcoma virus CT10 oncogene homolog-like
chr11_-_77532050 0.01 ENST00000308488.6
remodeling and spacing factor 1
chr20_-_39317868 0.01 ENST00000373313.2
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
chr7_-_83824169 0.01 ENST00000265362.4
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr7_-_111846435 0.01 ENST00000437633.1
ENST00000428084.1
dedicator of cytokinesis 4
chr2_+_173600671 0.00 ENST00000409036.1
Rap guanine nucleotide exchange factor (GEF) 4
chr11_+_2466218 0.00 ENST00000155840.5
potassium voltage-gated channel, KQT-like subfamily, member 1
chr7_-_32931387 0.00 ENST00000304056.4
kelch repeat and BTB (POZ) domain containing 2
chr10_-_32636106 0.00 ENST00000263062.8
ENST00000319778.6
enhancer of polycomb homolog 1 (Drosophila)
chr1_+_161284047 0.00 ENST00000367975.2
ENST00000342751.4
ENST00000432287.2
ENST00000392169.2
ENST00000513009.1
succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
chr9_+_128024067 0.00 ENST00000461379.1
ENST00000394084.1
ENST00000394105.2
ENST00000470056.1
ENST00000394104.2
ENST00000265956.4
ENST00000394083.2
ENST00000495955.1
ENST00000467750.1
ENST00000297933.6
GTPase activating protein and VPS9 domains 1
chr16_+_67063036 0.00 ENST00000290858.6
ENST00000564034.1
core-binding factor, beta subunit
chr6_+_106546808 0.00 ENST00000369089.3
PR domain containing 1, with ZNF domain
chr5_-_65017921 0.00 ENST00000381007.4
small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr11_-_18656028 0.00 ENST00000336349.5
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
chr4_-_176923483 0.00 ENST00000280187.7
ENST00000512509.1
glycoprotein M6A
chr5_+_74632993 0.00 ENST00000287936.4
3-hydroxy-3-methylglutaryl-CoA reductase

Network of associatons between targets according to the STRING database.

First level regulatory network of AAUGCCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.1 0.6 GO:0098914 membrane repolarization during atrial cardiac muscle cell action potential(GO:0098914)
0.0 0.1 GO:0071879 positive regulation of adrenergic receptor signaling pathway(GO:0071879)
0.0 0.2 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.2 GO:0030950 establishment or maintenance of actin cytoskeleton polarity(GO:0030950)
0.0 0.2 GO:0045627 positive regulation of T-helper 1 cell differentiation(GO:0045627) negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.0 0.1 GO:0031064 negative regulation of histone deacetylation(GO:0031064)
0.0 0.1 GO:0038161 prolactin signaling pathway(GO:0038161)
0.0 0.2 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.1 GO:0051866 general adaptation syndrome(GO:0051866)
0.0 0.2 GO:2000544 cell chemotaxis to fibroblast growth factor(GO:0035766) endothelial cell chemotaxis to fibroblast growth factor(GO:0035768) regulation of cell chemotaxis to fibroblast growth factor(GO:1904847) regulation of endothelial cell chemotaxis to fibroblast growth factor(GO:2000544)
0.0 0.1 GO:1903984 negative regulation of ribosome biogenesis(GO:0090071) positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.0 0.1 GO:0072658 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0 0.1 GO:0009956 radial pattern formation(GO:0009956)
0.0 0.1 GO:0072675 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.0 0.1 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.0 GO:0050925 negative regulation of negative chemotaxis(GO:0050925)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.4 GO:0005790 smooth endoplasmic reticulum(GO:0005790)
0.0 0.1 GO:0030891 VCB complex(GO:0030891)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0086089 voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization(GO:0086089)
0.1 1.4 GO:0086008 voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization(GO:0086008)
0.0 0.1 GO:0035033 histone deacetylase regulator activity(GO:0035033)
0.0 0.2 GO:0031403 lithium ion binding(GO:0031403)
0.0 0.1 GO:0008467 [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.0 0.1 GO:0051800 phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity(GO:0051800)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 ST MYOCYTE AD PATHWAY Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway.

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 2.0 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.0 0.2 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.0 0.2 REACTOME SIGNALING BY FGFR3 MUTANTS Genes involved in Signaling by FGFR3 mutants