hg19_v2_chr9_+_78505581_78505621	0.0726674	UUGGUCC	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr6_-_132272504_132272519	0.0666136	UUGGUCC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr17_+_30813576_30813637	0.0548976	UUGGUCC	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chr12_-_109125285_109125372	0.0492435	UUGGUCC	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr8_+_67039131_67039176	0.0431794	UUGGUCC	ENST00000315962.4|TRIM55|ENSG00000147573.12|tripartite motif containing 55 	ENST00000353317.5|TRIM55|ENSG00000147573.12|tripartite motif containing 55
hg19_v2_chr6_-_134639180_134639220	0.0421578	UUGGUCC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chrX_-_131352152_131352204	0.0412454	UUGGUCC	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr18_-_5296001_5296045	0.0378403	UUGGUCC	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr1_+_101361626_101361698	0.037508	UUGGUCC	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr11_-_27528301_27528336	0.0374868	UUGGUCC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr11_+_122709200_122709215	0.0369462	UUGGUCC	ENST00000227348.4|CRTAM|ENSG00000109943.4|cytotoxic and regulatory T cell molecule
hg19_v2_chr5_+_178286925_178287007	0.0360979	UUGGUCC	ENST00000322434.3|ZNF354B|ENSG00000178338.6|zinc finger protein 354B
hg19_v2_chr22_+_25202232_25202286	0.036093	UUGGUCC	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr20_-_57617831_57617964	0.0356275	UUGGUCC	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr19_-_7293942_7294045	0.0354886	UUGGUCC	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr2_+_112812778_112812800	0.0349077	UUGGUCC	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chrX_-_119694538_119694555	0.034789	UUGGUCC	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr15_-_37390482_37390572	0.0343606	UUGGUCC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr1_+_203764742_203764834	0.0336733	UUGGUCC	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr6_-_74230741_74230799	0.032583	UUGGUCC	ENST00000316292.9|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr3_-_46608010_46608048	0.0324868	UUGGUCC	ENST00000395905.3|LRRC2|ENSG00000163827.8|leucine rich repeat containing 2
hg19_v2_chr18_-_78005231_78005435	0.0319495	UUGGUCC	ENST00000470488.2|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma 	ENST00000353265.3|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma
hg19_v2_chr20_+_61569463_61569510	0.0313984	UUGGUCC	ENST00000266069.3|GID8|ENSG00000101193.6|GID complex subunit 8
hg19_v2_chr15_-_72612470_72612529	0.031356	UUGGUCC	ENST00000287202.5|CELF6|ENSG00000140488.10|CUGBP, Elav-like family member 6
hg19_v2_chrX_+_21392873_21392980	0.0310319	UUGGUCC	ENST00000379510.3|CNKSR2|ENSG00000149970.10|connector enhancer of kinase suppressor of Ras 2
hg19_v2_chr1_-_22469459_22469541	0.0308348	UUGGUCC	ENST00000290167.6|WNT4|ENSG00000162552.10|wingless-type MMTV integration site family, member 4
hg19_v2_chr12_+_27485823_27485868	0.0307854	UUGGUCC	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr12_-_49110613_49110681	0.0307492	UUGGUCC	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr21_-_15755446_15755508	0.0299184	UUGGUCC	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr16_+_50775948_50775961	0.0288025	UUGGUCC	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr4_+_145567173_145567296	0.028691	UUGGUCC	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr16_+_58549378_58549392	0.0283541	UUGGUCC	ENST00000310682.2|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000394266.4|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000219315.4|SETD6|ENSG00000103037.7|SET domain containing 6
hg19_v2_chr4_+_141294628_141294821	0.028031	UUGGUCC	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chr12_-_63328817_63328870	0.0275898	UUGGUCC	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr6_-_82462425_82462491	0.0267812	UUGGUCC	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr14_-_34931458_34931562	0.0267447	UUGGUCC	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chrX_+_153665248_153665281	0.0263954	UUGGUCC	ENST00000447750.2|GDI1|ENSG00000203879.7|GDP dissociation inhibitor 1
hg19_v2_chr3_+_5229356_5229367	0.0261184	UUGGUCC	ENST00000256497.4|EDEM1|ENSG00000134109.6|ER degradation enhancer, mannosidase alpha-like 1
hg19_v2_chr12_-_81331697_81331733	0.0258834	UUGGUCC	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chrY_+_15016725_15016769	0.0251053	UUGGUCC	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr20_+_56964169_56964182	0.0248861	UUGGUCC	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr10_+_133753533_133753533	0.0246788	UUGGUCC	ENST00000422256.2|PPP2R2D|ENSG00000175470.14|protein phosphatase 2, regulatory subunit B, delta
hg19_v2_chr6_+_1610681_1610681	0.0246605	UUGGUCC	ENST00000380874.2|FOXC1|ENSG00000054598.5|forkhead box C1
hg19_v2_chr6_+_111195973_111195994	0.0238622	UUGGUCC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr5_+_179159813_179159851	0.02337	UUGGUCC	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr5_-_141704566_141704605	0.0233332	UUGGUCC	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr19_+_34919257_34919332	0.0232842	UUGGUCC	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr18_+_52495426_52495430	0.0230016	UUGGUCC	ENST00000262094.5|RAB27B|ENSG00000041353.5|RAB27B, member RAS oncogene family
hg19_v2_chr5_-_65017921_65017968	0.0229429	UUGGUCC	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr3_-_179169330_179169384	0.0228405	UUGGUCC	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr3_+_43328004_43328095	0.0221063	UUGGUCC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr13_-_21476900_21476949	0.0219649	UUGGUCC	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr5_-_168006591_168006638	0.0219458	UUGGUCC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr2_-_16847084_16847110	0.0218371	UUGGUCC	ENST00000406434.1|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A 	ENST00000381323.3|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A
hg19_v2_chr12_+_110719032_110719113	0.0217606	UUGGUCC	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr6_+_106546808_106546833	0.0214846	UUGGUCC	ENST00000369089.3|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr5_+_76506706_76506787	0.0214068	UUGGUCC	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chrX_-_140271249_140271333	0.0213792	UUGGUCC	ENST00000370526.2|LDOC1|ENSG00000182195.6|leucine zipper, down-regulated in cancer 1
hg19_v2_chr8_-_28243934_28243993	0.0211058	UUGGUCC	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr4_+_144106080_144106144	0.0207881	UUGGUCC	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr14_+_101359265_101359265	0.0207848	UUGGUCC	ENST00000599197.1|AL117190.3|ENSG00000269375.1|Esophagus cancer-related gene-2 interaction susceptibility protein; Uncharacterized protein
hg19_v2_chr5_+_43121698_43121786	0.0206923	UUGGUCC	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr9_+_131102925_131103015	0.0206541	UUGGUCC	ENST00000372870.1|SLC27A4|ENSG00000167114.8|solute carrier family 27 (fatty acid transporter), member 4 	ENST00000300456.4|SLC27A4|ENSG00000167114.8|solute carrier family 27 (fatty acid transporter), member 4
hg19_v2_chr4_-_177713788_177713881	0.0204395	UUGGUCC	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr3_+_33318914_33318985	0.0202501	UUGGUCC	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr1_-_154531095_154531119	0.0202107	UUGGUCC	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr1_-_205782304_205782332	0.0201071	UUGGUCC	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr12_+_56521840_56521995	0.0200467	UUGGUCC	ENST00000394048.5|ESYT1|ENSG00000139641.8|extended synaptotagmin-like protein 1
hg19_v2_chr10_-_104262426_104262437	0.0200002	UUGGUCC	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr20_-_52210368_52210384	0.019798	UUGGUCC	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr3_+_45730733_45730773	0.0196354	UUGGUCC	ENST00000418611.1|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast) 	ENST00000389061.5|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v2_chr2_+_33359687_33359724	0.0196344	UUGGUCC	ENST00000402934.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000404525.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000407925.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1
hg19_v2_chr9_+_101867359_101867376	0.0194518	UUGGUCC	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr1_+_117910047_117910131	0.0194096	UUGGUCC	ENST00000356554.3|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr7_-_27205136_27205164	0.01919	UUGGUCC	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr2_+_62423242_62423288	0.0191287	UUGGUCC	ENST00000301998.4|B3GNT2|ENSG00000170340.10|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
hg19_v2_chr13_+_28813645_28813770	0.0190327	UUGGUCC	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr22_-_36784035_36784063	0.0190141	UUGGUCC	ENST00000216181.5|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr14_-_64194745_64194799	0.0188398	UUGGUCC	ENST00000247225.6|SGPP1|ENSG00000126821.7|sphingosine-1-phosphate phosphatase 1
hg19_v2_chr17_+_80477571_80477637	0.0187644	UUGGUCC	ENST00000335255.5|FOXK2|ENSG00000141568.15|forkhead box K2
hg19_v2_chr3_-_88108192_88108203	0.0184758	UUGGUCC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr3_+_140660634_140660729	0.0184662	UUGGUCC	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr12_-_77459306_77459365	0.0183874	UUGGUCC	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chrX_+_41192595_41192651	0.0183466	UUGGUCC	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr2_+_54683419_54683442	0.0183303	UUGGUCC	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr1_+_201924619_201924652	0.0182895	UUGGUCC	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr7_-_158622210_158622319	0.0182439	UUGGUCC	ENST00000251527.5|ESYT2|ENSG00000117868.11|extended synaptotagmin-like protein 2
hg19_v2_chrX_-_135056216_135056227	0.0179065	UUGGUCC	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr11_+_76777979_76778027	0.017894	UUGGUCC	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr4_-_141075330_141075381	0.0176494	UUGGUCC	ENST00000509479.2|MAML3|ENSG00000196782.8|mastermind-like 3 (Drosophila)
hg19_v2_chr1_+_218519577_218519594	0.0174395	UUGGUCC	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr4_+_108745711_108745726	0.0170885	UUGGUCC	ENST00000394684.4|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr16_-_15736953_15737025	0.017059	UUGGUCC	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr13_+_96329381_96329416	0.0166663	UUGGUCC	ENST00000602402.1|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3 	ENST00000376795.6|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3
hg19_v2_chrX_+_103411189_103411301	0.0164023	UUGGUCC	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr22_+_29279552_29279586	0.0163955	UUGGUCC	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr15_-_48937982_48938046	0.0160821	UUGGUCC	ENST00000316623.5|FBN1|ENSG00000166147.9|fibrillin 1
hg19_v2_chr19_-_17799008_17799122	0.0156599	UUGGUCC	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
hg19_v2_chr7_+_5229819_5229900	0.0156123	UUGGUCC	ENST00000288828.4|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000401525.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000404704.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2
hg19_v2_chr17_-_48278983_48278999	0.0152769	UUGGUCC	ENST00000225964.5|COL1A1|ENSG00000108821.9|collagen, type I, alpha 1
hg19_v2_chr3_-_32544900_32544900	0.0151739	UUGGUCC	ENST00000205636.3|CMTM6|ENSG00000091317.7|CKLF-like MARVEL transmembrane domain containing 6
hg19_v2_chr1_-_51984908_51984952	0.0150518	UUGGUCC	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr6_+_83903061_83903113	0.0147455	UUGGUCC	ENST00000369724.4|RWDD2A|ENSG00000013392.6|RWD domain containing 2A 	ENST00000539997.1|RWDD2A|ENSG00000013392.6|RWD domain containing 2A
hg19_v2_chr9_+_34958254_34958321	0.0146989	UUGGUCC	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr1_+_118148556_118148681	0.0145309	UUGGUCC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr19_-_8070474_8070564	0.0144248	UUGGUCC	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr10_-_98346801_98346812	0.0143049	UUGGUCC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr3_-_9291063_9291136	0.0139636	UUGGUCC	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr2_-_130939115_130939199	0.0139405	UUGGUCC	ENST00000441135.1|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000339679.7|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000426662.2|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000443958.2|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000351288.6|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000453750.1|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) 	ENST00000452225.2|SMPD4|ENSG00000136699.15|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg19_v2_chr4_+_6642404_6642426	0.0139013	UUGGUCC	ENST00000507420.1|MRFAP1|ENSG00000179010.10|Morf4 family associated protein 1 	ENST00000382581.4|MRFAP1|ENSG00000179010.10|Morf4 family associated protein 1
hg19_v2_chr6_+_160183492_160183523	0.0138998	UUGGUCC	ENST00000541436.1|ACAT2|ENSG00000120437.7|acetyl-CoA acetyltransferase 2
hg19_v2_chr14_+_103243813_103243955	0.0137716	UUGGUCC	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr17_+_16593539_16593639	0.0137442	UUGGUCC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr1_+_97187318_97187380	0.0135324	UUGGUCC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr4_-_176923483_176923514	0.0132795	UUGGUCC	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr10_-_126849068_126849138	0.0130379	UUGGUCC	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr22_-_28315115_28315260	0.0129951	UUGGUCC	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr14_+_90863327_90863356	0.0128553	UUGGUCC	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr16_+_69599861_69599887	0.0128115	UUGGUCC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr17_-_33448468_33448513	0.0127772	UUGGUCC	ENST00000591723.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein  	ENST00000587405.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000593039.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein
hg19_v2_chrX_+_16737718_16737778	0.0127365	UUGGUCC	ENST00000380155.3|SYAP1|ENSG00000169895.5|synapse associated protein 1
hg19_v2_chr16_+_50582222_50582241	0.0127301	UUGGUCC	ENST00000268459.3|NKD1|ENSG00000140807.4|naked cuticle homolog 1 (Drosophila)
hg19_v2_chr17_-_40306934_40307035	0.0127164	UUGGUCC	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chrX_-_129402857_129402880	0.0124329	UUGGUCC	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr1_+_40505891_40505995	0.0124249	UUGGUCC	ENST00000372797.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372802.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000449311.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast)
hg19_v2_chr3_+_150804676_150804697	0.012408	UUGGUCC	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr2_-_61765315_61765422	0.0123959	UUGGUCC	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr18_-_35145593_35145614	0.0123628	UUGGUCC	ENST00000334919.5|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000591282.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000588597.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4
hg19_v2_chr1_+_7831323_7831414	0.0123316	UUGGUCC	ENST00000054666.6|VAMP3|ENSG00000049245.8|vesicle-associated membrane protein 3
hg19_v2_chr5_-_127873659_127873735	0.0122984	UUGGUCC	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr5_+_122424816_122424944	0.0121164	UUGGUCC	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chrX_+_64887512_64887537	0.0120038	UUGGUCC	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr18_-_61089665_61089733	0.0119139	UUGGUCC	ENST00000238497.5|VPS4B|ENSG00000119541.5|vacuolar protein sorting 4 homolog B (S. cerevisiae)
hg19_v2_chr20_+_61427797_61427863	0.0118145	UUGGUCC	ENST00000370487.3|MRGBP|ENSG00000101189.5|MRG/MORF4L binding protein
hg19_v2_chr3_-_194991876_194991901	0.0117749	UUGGUCC	ENST00000310380.6|XXYLT1|ENSG00000173950.11|xyloside xylosyltransferase 1
hg19_v2_chr20_-_35402123_35402221	0.0116242	UUGGUCC	ENST00000373740.3|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000426836.1|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000373745.3|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000448110.2|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000438549.1|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000447406.1|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000373750.4|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component 	ENST00000373734.4|DSN1|ENSG00000149636.11|DSN1, MIS12 kinetochore complex component
hg19_v2_chr14_+_89029253_89029318	0.0116104	UUGGUCC	ENST00000251038.5|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000359301.3|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000302216.8|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr11_-_62599505_62599560	0.0115631	UUGGUCC	ENST00000377897.4|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000394690.1|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000541317.1|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000294179.3|STX5|ENSG00000162236.7|syntaxin 5
hg19_v2_chr4_+_6784401_6784510	0.0115414	UUGGUCC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr6_+_105404899_105404931	0.0114757	UUGGUCC	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr8_-_81083731_81083813	0.0114436	UUGGUCC	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr1_+_28995231_28995250	0.0110766	UUGGUCC	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr14_+_69726656_69726686	0.0110706	UUGGUCC	ENST00000337827.4|GALNT16|ENSG00000100626.12|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
hg19_v2_chr11_-_9025541_9025596	0.0110499	UUGGUCC	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr19_-_14629224_14629262	0.0110287	UUGGUCC	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr5_+_175875349_175875361	0.0109904	UUGGUCC	ENST00000261942.6|FAF2|ENSG00000113194.8|Fas associated factor family member 2
hg19_v2_chrX_-_48901012_48901050	0.0109478	UUGGUCC	ENST00000315869.7|TFE3|ENSG00000068323.12|transcription factor binding to IGHM enhancer 3
hg19_v2_chr3_-_52090461_52090566	0.0108352	UUGGUCC	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr1_+_155108294_155108350	0.0108249	UUGGUCC	ENST00000303343.8|SLC50A1|ENSG00000169241.13|solute carrier family 50 (sugar efflux transporter), member 1 	ENST00000368404.4|SLC50A1|ENSG00000169241.13|solute carrier family 50 (sugar efflux transporter), member 1 	ENST00000368401.5|SLC50A1|ENSG00000169241.13|solute carrier family 50 (sugar efflux transporter), member 1
hg19_v2_chr2_+_200775971_200775988	0.0108077	UUGGUCC	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr1_-_29450399_29450447	0.0107351	UUGGUCC	ENST00000521452.1|TMEM200B|ENSG00000253304.1|transmembrane protein 200B
hg19_v2_chrX_+_53078273_53078273	0.0106115	UUGGUCC	ENST00000332582.4|GPR173|ENSG00000184194.5|G protein-coupled receptor 173
hg19_v2_chr2_+_139259324_139259389	0.0104605	UUGGUCC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chrX_+_107069063_107069123	0.0104485	UUGGUCC	ENST00000262843.6|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr17_-_1928621_1928641	0.0103518	UUGGUCC	ENST00000331238.6|RTN4RL1|ENSG00000185924.6|reticulon 4 receptor-like 1
hg19_v2_chr17_-_40021656_40021684	0.010342	UUGGUCC	ENST00000319121.3|KLHL11|ENSG00000178502.5|kelch-like family member 11
hg19_v2_chr4_+_52709229_52709345	0.010332	UUGGUCC	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr13_+_98794810_98794826	0.0103025	UUGGUCC	ENST00000595437.1|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr1_+_27561007_27561061	0.010242	UUGGUCC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr6_+_117996621_117996665	0.0102092	UUGGUCC	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr3_+_9404526_9404782	0.0100896	UUGGUCC	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr1_+_47799446_47799493	0.00997678	UUGGUCC	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr3_-_171178157_171178225	0.00950302	UUGGUCC	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr3_-_15901278_15901354	0.0093539	UUGGUCC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr11_-_18656028_18656040	0.00926385	UUGGUCC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr3_-_45267760_45267826	0.00924668	UUGGUCC	ENST00000503771.1|TMEM158|ENSG00000249992.1|transmembrane protein 158 (gene/pseudogene)
hg19_v2_chr1_+_213031570_213031597	0.0092149	UUGGUCC	ENST00000366971.4|FLVCR1|ENSG00000162769.8|feline leukemia virus subgroup C cellular receptor 1
hg19_v2_chr5_+_52776228_52776245	0.00877065	UUGGUCC	ENST00000256759.3|FST|ENSG00000134363.7|follistatin
hg19_v2_chr8_-_66754172_66754201	0.00874155	UUGGUCC	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr16_-_75018968_75019054	0.00868189	UUGGUCC	ENST00000262144.6|WDR59|ENSG00000103091.10|WD repeat domain 59
hg19_v2_chr12_+_58166431_58166461	0.00847796	UUGGUCC	ENST00000333012.5|METTL21B|ENSG00000123427.11|methyltransferase like 21B
hg19_v2_chr1_-_149889382_149889434	0.00844233	UUGGUCC	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr2_-_69870835_69870853	0.00842384	UUGGUCC	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr15_-_23034322_23034432	0.00807481	UUGGUCC	ENST00000539711.2|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000560039.1|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000398013.3|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000337451.3|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000359727.4|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000398014.2|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2
hg19_v2_chr10_-_75410771_75410813	0.00801509	UUGGUCC	ENST00000372873.4|SYNPO2L|ENSG00000166317.7|synaptopodin 2-like
hg19_v2_chr16_+_16043406_16043434	0.00792841	UUGGUCC	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr17_-_72919317_72919368	0.00792509	UUGGUCC	ENST00000319642.1|USH1G|ENSG00000182040.4|Usher syndrome 1G (autosomal recessive)
hg19_v2_chr20_+_23342783_23342957	0.00786861	UUGGUCC	ENST00000544236.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000338121.5|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000542987.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000424216.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1
hg19_v2_chr8_-_30670384_30670394	0.00784173	UUGGUCC	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr18_+_905104_905118	0.00783538	UUGGUCC	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr5_-_142065612_142065638	0.00765632	UUGGUCC	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chrX_+_40440146_40440268	0.00764491	UUGGUCC	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr10_+_104678032_104678094	0.0075174	UUGGUCC	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr9_+_130026756_130026871	0.00744612	UUGGUCC	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr3_+_141106643_141106681	0.00717201	UUGGUCC	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr16_-_11876408_11876429	0.00713163	UUGGUCC	ENST00000396516.2|ZC3H7A|ENSG00000122299.7|zinc finger CCCH-type containing 7A
hg19_v2_chr8_-_38326139_38326161	0.00701708	UUGGUCC	ENST00000335922.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000532791.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397091.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr1_+_78245303_78245351	0.00685302	UUGGUCC	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr9_+_115513003_115513137	0.0067795	UUGGUCC	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr12_+_27932803_27932953	0.00662647	UUGGUCC	ENST00000381271.2|KLHL42|ENSG00000087448.5|kelch-like family member 42
hg19_v2_chr3_-_53381539_53381654	0.00659132	UUGGUCC	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr17_+_7476136_7476160	0.0064633	UUGGUCC	ENST00000582169.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578754.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578495.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000293831.8|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000380512.5|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000585024.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000583802.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000577269.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000584784.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000582746.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1
hg19_v2_chr8_+_17354587_17354610	0.00645828	UUGGUCC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr20_-_47444420_47444526	0.00635261	UUGGUCC	ENST00000371941.3|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 	ENST00000396220.1|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
hg19_v2_chr19_+_797392_797432	0.00619121	UUGGUCC	ENST00000350092.4|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000349038.4|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000586481.1|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000585535.1|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1
hg19_v2_chr1_-_212004090_212004168	0.00614428	UUGGUCC	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr9_+_133971909_133971943	0.00609595	UUGGUCC	ENST00000247291.3|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372302.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372300.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372298.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like
hg19_v2_chr4_-_89744457_89744512	0.00602684	UUGGUCC	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr10_-_115613828_115613859	0.00599977	UUGGUCC	ENST00000361384.2|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr1_+_151043070_151043110	0.00598713	UUGGUCC	ENST00000368918.3|GABPB2|ENSG00000143458.7|GA binding protein transcription factor, beta subunit 2 	ENST00000368917.1|GABPB2|ENSG00000143458.7|GA binding protein transcription factor, beta subunit 2
hg19_v2_chr17_-_48227877_48227877	0.00596124	UUGGUCC	ENST00000316878.6|PPP1R9B|ENSG00000108819.9|protein phosphatase 1, regulatory subunit 9B
hg19_v2_chr5_-_178157700_178157734	0.0059539	UUGGUCC	ENST00000335815.2|ZNF354A|ENSG00000169131.6|zinc finger protein 354A
hg19_v2_chr11_+_68228186_68228281	0.0059134	UUGGUCC	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr13_-_33859819_33859910	0.00589232	UUGGUCC	ENST00000336934.5|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr16_-_30457048_30457224	0.00583402	UUGGUCC	ENST00000500504.2|SEPHS2|ENSG00000179918.15|selenophosphate synthetase 2 	ENST00000542752.1|SEPHS2|ENSG00000179918.15|selenophosphate synthetase 2
hg19_v2_chr6_-_17706618_17706666	0.00573947	UUGGUCC	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr4_+_113152881_113152912	0.00572315	UUGGUCC	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr6_-_166075557_166075588	0.00562004	UUGGUCC	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr9_-_115095883_115095947	0.00559814	UUGGUCC	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr22_-_17602200_17602265	0.00558786	UUGGUCC	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr3_-_196159268_196159345	0.00556741	UUGGUCC	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chr4_+_1283639_1283705	0.00554813	UUGGUCC	ENST00000303400.4|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000505177.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000503653.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000264750.6|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000502558.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000452175.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000514708.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher
hg19_v2_chr11_+_63706444_63706486	0.00553409	UUGGUCC	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr12_+_51442101_51442129	0.00545496	UUGGUCC	ENST00000550929.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000262055.4|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000550442.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000549340.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548209.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548251.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000550814.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000547660.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000380123.2|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000548401.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000418425.2|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000547008.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1 	ENST00000552739.1|LETMD1|ENSG00000050426.11|LETM1 domain containing 1
hg19_v2_chr8_-_53626974_53627032	0.00541922	UUGGUCC	ENST00000435644.2|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000518710.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000025008.5|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000517963.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1
hg19_v2_chr1_+_38158090_38158174	0.0052938	UUGGUCC	ENST00000373055.1|CDCA8|ENSG00000134690.6|cell division cycle associated 8 	ENST00000327331.2|CDCA8|ENSG00000134690.6|cell division cycle associated 8
hg19_v2_chr19_+_2164126_2164168	0.00515802	UUGGUCC	ENST00000398665.3|DOT1L|ENSG00000104885.13|DOT1-like histone H3K79 methyltransferase
hg19_v2_chr19_+_17186577_17186637	0.00514175	UUGGUCC	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr2_-_26205340_26205381	0.00513193	UUGGUCC	ENST00000264712.3|KIF3C|ENSG00000084731.9|kinesin family member 3C
hg19_v2_chr6_+_163835669_163835693	0.00483274	UUGGUCC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr8_-_101571964_101572017	0.00477581	UUGGUCC	ENST00000520552.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000521345.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000523000.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000335659.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000358990.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000519597.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46
hg19_v2_chr12_-_106641728_106641805	0.00454266	UUGGUCC	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr16_-_67185117_67185117	0.00449208	UUGGUCC	ENST00000449549.3|B3GNT9|ENSG00000237172.3|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
hg19_v2_chr4_+_113970772_113970885	0.00439335	UUGGUCC	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr16_-_31106048_31106124	0.00435811	UUGGUCC	ENST00000300851.6|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr1_+_52870227_52870243	0.00412592	UUGGUCC	ENST00000257181.9|PRPF38A|ENSG00000134748.12|pre-mRNA processing factor 38A
hg19_v2_chr15_-_102029873_102029917	0.00409458	UUGGUCC	ENST00000348070.1|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000358417.3|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000344273.2|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6
hg19_v2_chr17_-_35969409_35969544	0.00404534	UUGGUCC	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr14_-_78083112_78083140	0.00404485	UUGGUCC	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr2_-_209119831_209119857	0.00389637	UUGGUCC	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr6_-_128841503_128841870	0.00387812	UUGGUCC	ENST00000368215.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000532331.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368213.5|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368207.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000525459.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368210.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368226.4|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368227.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K
hg19_v2_chr15_-_23086394_23086457	0.0038338	UUGGUCC	ENST00000337435.4|NIPA1|ENSG00000170113.11|non imprinted in Prader-Willi/Angelman syndrome 1
hg19_v2_chr1_+_214161272_214161322	0.00377683	UUGGUCC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr17_-_58469474_58469511	0.00376514	UUGGUCC	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr8_-_124286735_124286773	0.00361063	UUGGUCC	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr5_-_56247935_56247959	0.00359716	UUGGUCC	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr5_-_171881491_171881554	0.00351398	UUGGUCC	ENST00000311601.5|SH3PXD2B|ENSG00000174705.7|SH3 and PX domains 2B
hg19_v2_chr8_-_22926623_22926692	0.00342292	UUGGUCC	ENST00000276431.4|TNFRSF10B|ENSG00000120889.8|tumor necrosis factor receptor superfamily, member 10b
hg19_v2_chr6_-_111927449_111927482	0.00341446	UUGGUCC	ENST00000368761.5|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000392556.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000340026.6|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr17_-_36956155_36956223	0.00341357	UUGGUCC	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chrX_+_100075368_100075525	0.00336454	UUGGUCC	ENST00000415585.2|CSTF2|ENSG00000101811.9|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 	ENST00000372972.2|CSTF2|ENSG00000101811.9|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa 	ENST00000413437.1|CSTF2|ENSG00000101811.9|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
hg19_v2_chr2_-_148778258_148778319	0.00334871	UUGGUCC	ENST00000392857.5|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000457954.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000392858.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000542387.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4
hg19_v2_chr17_-_56595196_56595266	0.00333105	UUGGUCC	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr10_+_91061712_91061812	0.00328508	UUGGUCC	ENST00000371826.3|IFIT2|ENSG00000119922.7|interferon-induced protein with tetratricopeptide repeats 2
hg19_v2_chr12_+_79258547_79258607	0.00328267	UUGGUCC	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr2_-_112642267_112642267	0.00311519	UUGGUCC	ENST00000341068.3|ANAPC1|ENSG00000153107.7|anaphase promoting complex subunit 1
hg19_v2_chr8_+_26240414_26240631	0.003016	UUGGUCC	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr4_+_128703295_128703496	0.0029498	UUGGUCC	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr9_-_16870704_16870841	0.00294433	UUGGUCC	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr5_+_133451254_133451316	0.00273674	UUGGUCC	ENST00000517851.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000521639.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000522375.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000378560.4|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000432532.2|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000520958.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000518915.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000395023.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box)
hg19_v2_chr9_+_2015335_2015374	0.00253773	UUGGUCC	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr10_+_60272814_60272900	0.00251048	UUGGUCC	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr1_+_11866207_11866268	0.00250863	UUGGUCC	ENST00000312413.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000346436.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr1_+_26438289_26438352	0.00250832	UUGGUCC	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr10_+_134210672_134210753	0.00243108	UUGGUCC	ENST00000305233.5|PWWP2B|ENSG00000171813.10|PWWP domain containing 2B 	ENST00000368609.4|PWWP2B|ENSG00000171813.10|PWWP domain containing 2B
hg19_v2_chr5_-_73937244_73937274	0.00235983	UUGGUCC	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr11_-_47870019_47870033	0.00235183	UUGGUCC	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr2_+_209130965_209131031	0.00229246	UUGGUCC	ENST00000392202.3|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000264380.4|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000407449.1|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000308862.6|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing
hg19_v2_chr4_-_7873981_7874044	0.00224078	UUGGUCC	ENST00000360265.4|AFAP1|ENSG00000196526.6|actin filament associated protein 1
hg19_v2_chr3_-_155572164_155572236	0.00222074	UUGGUCC	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr12_+_53774423_53774658	0.00204437	UUGGUCC	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr11_-_13484713_13484850	0.00198505	UUGGUCC	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr7_+_129710350_129710434	0.00194972	UUGGUCC	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr5_-_79287060_79287093	0.00169753	UUGGUCC	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr17_-_1359443_1359553	0.00166511	UUGGUCC	ENST00000574295.1|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000398970.5|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000300574.2|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog
hg19_v2_chr7_-_152133059_152133102	0.00166285	UUGGUCC	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr17_-_42345487_42345514	0.00165239	UUGGUCC	ENST00000262418.6|SLC4A1|ENSG00000004939.9|solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
hg19_v2_chr7_+_55086794_55086811	0.001646	UUGGUCC	ENST00000275493.2|EGFR|ENSG00000146648.11|epidermal growth factor receptor 	ENST00000442591.1|EGFR|ENSG00000146648.11|epidermal growth factor receptor
hg19_v2_chr5_-_171433819_171433911	0.00158241	UUGGUCC	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr15_+_79724858_79724858	0.00156804	UUGGUCC	ENST00000305428.3|KIAA1024|ENSG00000169330.4|KIAA1024
hg19_v2_chr3_-_148804275_148804346	0.00155786	UUGGUCC	ENST00000392912.2|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000465259.1|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000310053.5|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000494055.1|HLTF|ENSG00000071794.11|helicase-like transcription factor
hg19_v2_chr1_+_92764522_92764628	0.00152051	UUGGUCC	ENST00000610020.1|RPAP2|ENSG00000122484.8|RNA polymerase II associated protein 2
hg19_v2_chr17_+_38296576_38296604	0.00150431	UUGGUCC	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr1_-_24306798_24306828	0.00141521	UUGGUCC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr10_+_116581503_116581570	0.00139678	UUGGUCC	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr20_-_39928705_39928740	0.00137536	UUGGUCC	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr9_+_17579084_17579128	0.00133743	UUGGUCC	ENST00000380607.4|SH3GL2|ENSG00000107295.8|SH3-domain GRB2-like 2
hg19_v2_chr11_-_6502534_6502579	0.00123769	UUGGUCC	ENST00000254584.2|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2 	ENST00000525235.1|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2 	ENST00000445086.2|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2
hg19_v2_chr5_-_137878887_137878989	0.00117267	UUGGUCC	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr17_+_29718642_29718656	0.00117001	UUGGUCC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr9_+_140772226_140772386	0.00111543	UUGGUCC	ENST00000277551.2|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371372.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000277549.5|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371363.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371357.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371355.4|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit
hg19_v2_chr1_+_36690011_36690092	0.00107139	UUGGUCC	ENST00000354618.5|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000469141.2|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000478853.1|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3
hg19_v2_chr14_+_69658194_69658272	0.00104414	UUGGUCC	ENST00000409018.3|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2 	ENST00000409014.1|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2 	ENST00000409675.1|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2
hg19_v2_chr12_-_45269430_45269440	0.000880099	UUGGUCC	ENST00000395487.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr5_+_141303373_141303421	0.000812989	UUGGUCC	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr22_+_40573921_40573946	0.000802137	UUGGUCC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr12_+_120105558_120105694	0.000771186	UUGGUCC	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr17_-_79829190_79829282	0.000759686	UUGGUCC	ENST00000581876.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000584461.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000583868.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000400721.4|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000269321.7|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr7_+_77469439_77469497	0.000646737	UUGGUCC	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr6_-_114664180_114664209	0.000622278	UUGGUCC	ENST00000312719.5|HS3ST5|ENSG00000249853.3|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
hg19_v2_chr17_+_8152590_8152660	0.000572636	UUGGUCC	ENST00000584044.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000314666.6|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000545834.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000581242.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase
hg19_v2_chr7_+_30067973_30068063	0.00054101	UUGGUCC	ENST00000258679.7|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000449726.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396257.2|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396259.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg19_v2_chr1_-_209825674_209825811	0.000507585	UUGGUCC	ENST00000367030.3|LAMB3|ENSG00000196878.8|laminin, beta 3 	ENST00000356082.4|LAMB3|ENSG00000196878.8|laminin, beta 3
hg19_v2_chr1_-_150947343_150947479	0.000479949	UUGGUCC	ENST00000271688.6|CERS2|ENSG00000143418.15|ceramide synthase 2 	ENST00000368954.5|CERS2|ENSG00000143418.15|ceramide synthase 2
hg19_v2_chr8_+_29952914_29953016	0.000367367	UUGGUCC	ENST00000321250.8|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000518001.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000520682.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000442880.2|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000523116.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr16_-_58663720_58663790	0.000318045	UUGGUCC	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr7_+_55433131_55433142	0.000305018	UUGGUCC	ENST00000254770.2|LANCL2|ENSG00000132434.5|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v2_chr10_+_6186847_6186921	0.00028386	UUGGUCC	ENST00000536985.1|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379789.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v2_chr22_-_29784519_29784576	0.000257132	UUGGUCC	ENST00000357586.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000356015.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000432560.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000317368.7|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit
hg19_v2_chr1_+_109102652_109102728	0.000249864	UUGGUCC	ENST00000370035.3|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B 	ENST00000405454.1|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B
hg19_v2_chr2_+_203499901_203499911	0.00016025	UUGGUCC	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr8_-_134309335_134309503	5.40402e-05	UUGGUCC	ENST00000522890.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000323851.7|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518176.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000354944.5|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000537882.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000522476.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518066.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000521544.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000518480.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1 	ENST00000523892.1|NDRG1|ENSG00000104419.10|N-myc downstream regulated 1
hg19_v2_chr20_+_43104508_43104540	5.14299e-05	UUGGUCC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr2_-_204400113_204400149	4.8982e-05	UUGGUCC	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
