hg19_v2_chr2_+_30369807_30369847	0.0274248	UGACAUC	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chr14_-_34931458_34931562	0.0238799	UGACAUC	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr12_+_32112340_32112358	0.0224258	UGACAUC	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr21_-_15755446_15755508	0.020761	UGACAUC	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr9_-_94186131_94186174	0.0200559	UGACAUC	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr1_+_91966384_91966454	0.0175265	UGACAUC	ENST00000430031.2|CDC7|ENSG00000097046.8|cell division cycle 7 	ENST00000234626.6|CDC7|ENSG00000097046.8|cell division cycle 7
hg19_v2_chr19_-_46476791_46476819	0.015909	UGACAUC	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr14_-_45431091_45431175	0.0154153	UGACAUC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr19_-_18314836_18314884	0.0153398	UGACAUC	ENST00000464076.3|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family 	ENST00000222256.4|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family
hg19_v2_chr10_+_70480963_70481010	0.015037	UGACAUC	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr6_-_139695757_139695795	0.0149304	UGACAUC	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr4_-_120988229_120988229	0.0148952	UGACAUC	ENST00000296509.6|MAD2L1|ENSG00000164109.9|MAD2 mitotic arrest deficient-like 1 (yeast)
hg19_v2_chr9_+_91003271_91003386	0.0148886	UGACAUC	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr2_-_65357225_65357267	0.0148069	UGACAUC	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr4_-_103748880_103749047	0.0146896	UGACAUC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr14_-_37642016_37642071	0.0141331	UGACAUC	ENST00000331299.5|SLC25A21|ENSG00000183032.6|solute carrier family 25 (mitochondrial oxoadipate carrier), member 21
hg19_v2_chr3_-_72496035_72496069	0.0140808	UGACAUC	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr6_-_114292449_114292474	0.0139614	UGACAUC	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr9_-_86153218_86153461	0.0139418	UGACAUC	ENST00000304195.3|FRMD3|ENSG00000172159.11|FERM domain containing 3 	ENST00000376438.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr1_-_70671216_70671303	0.013122	UGACAUC	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr10_+_111967345_111967442	0.0129104	UGACAUC	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr15_+_44719394_44719579	0.0128548	UGACAUC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr6_+_116601265_116601288	0.0125106	UGACAUC	ENST00000452085.3|DSE|ENSG00000111817.12|dermatan sulfate epimerase
hg19_v2_chr8_+_30891298_30891363	0.0125007	UGACAUC	ENST00000298139.5|WRN|ENSG00000165392.5|Werner syndrome, RecQ helicase-like
hg19_v2_chr5_+_134181625_134181713	0.0123514	UGACAUC	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr1_+_193091080_193091222	0.0120627	UGACAUC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr18_+_44526786_44526818	0.0112449	UGACAUC	ENST00000245121.5|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2 	ENST00000356157.7|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2
hg19_v2_chr2_+_198318147_198318182	0.0111105	UGACAUC	ENST00000263960.2|COQ10B|ENSG00000115520.4|coenzyme Q10 homolog B (S. cerevisiae)
hg19_v2_chr2_+_172950227_172950264	0.0110897	UGACAUC	ENST00000341900.6|DLX1|ENSG00000144355.10|distal-less homeobox 1
hg19_v2_chr2_+_159313452_159313624	0.0110062	UGACAUC	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr15_+_68570062_68570147	0.0108897	UGACAUC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr1_-_84464780_84464862	0.0108777	UGACAUC	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr19_-_55954230_55954230	0.0108777	UGACAUC	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr15_-_49447835_49447858	0.0106385	UGACAUC	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr13_-_73301819_73301830	0.010457	UGACAUC	ENST00000377818.3|MZT1|ENSG00000204899.5|mitotic spindle organizing protein 1
hg19_v2_chr6_-_13711773_13711796	0.0103338	UGACAUC	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr3_+_121311966_121311966	0.0100139	UGACAUC	ENST00000338040.4|FBXO40|ENSG00000163833.6|F-box protein 40
hg19_v2_chr14_+_79745746_79745762	0.0100098	UGACAUC	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr2_-_27886676_27886714	0.00998044	UGACAUC	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr3_-_182698381_182698431	0.00979928	UGACAUC	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr12_+_95611516_95611527	0.00950875	UGACAUC	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr10_+_112679301_112679346	0.00931787	UGACAUC	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr11_-_27528301_27528336	0.00931098	UGACAUC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr7_+_31092076_31092106	0.00915276	UGACAUC	ENST00000304166.4|ADCYAP1R1|ENSG00000078549.10|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
hg19_v2_chr10_+_98592009_98592061	0.00899946	UGACAUC	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr21_-_16437255_16437340	0.00894909	UGACAUC	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr2_+_14772810_14772853	0.00838034	UGACAUC	ENST00000295092.2|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A 	ENST00000331243.4|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A
hg19_v2_chr5_-_98262240_98262240	0.00829748	UGACAUC	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr11_+_9406169_9406210	0.00826228	UGACAUC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr12_-_29534074_29534127	0.00823084	UGACAUC	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr14_-_25519095_25519280	0.00785981	UGACAUC	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr15_+_59279851_59279880	0.00748527	UGACAUC	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr6_+_117586713_117586737	0.00747947	UGACAUC	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr18_+_9913977_9914088	0.00747625	UGACAUC	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr9_-_135819987_135820020	0.00746275	UGACAUC	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr5_-_131132614_131132648	0.00714231	UGACAUC	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr15_+_51633826_51633858	0.00712959	UGACAUC	ENST00000335449.6|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr11_-_31839488_31839515	0.00707694	UGACAUC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr16_+_53088885_53088961	0.00706252	UGACAUC	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chrX_+_64887512_64887537	0.00700936	UGACAUC	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr3_+_132136331_132136378	0.00692661	UGACAUC	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr14_+_23563952_23563976	0.00676991	UGACAUC	ENST00000319074.4|C14orf119|ENSG00000179933.4|chromosome 14 open reading frame 119
hg19_v2_chrX_-_73834449_73834481	0.00671964	UGACAUC	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr1_+_65730385_65730468	0.0064833	UGACAUC	ENST00000263441.7|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENST00000395325.3|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v2_chr9_+_125026882_125026952	0.00636921	UGACAUC	ENST00000297908.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000373730.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000546115.1|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000344641.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor
hg19_v2_chr20_+_47538357_47538427	0.00627049	UGACAUC	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr12_-_123011536_123011547	0.0062354	UGACAUC	ENST00000331738.7|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000354654.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr6_+_97372596_97372644	0.0060818	UGACAUC	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr6_-_100912785_100912822	0.00598853	UGACAUC	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr16_+_9185450_9185516	0.0058724	UGACAUC	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr8_-_72987810_72987852	0.0058097	UGACAUC	ENST00000262209.4|TRPA1|ENSG00000104321.6|transient receptor potential cation channel, subfamily A, member 1
hg19_v2_chr1_-_213189108_213189154	0.00579297	UGACAUC	ENST00000535388.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr12_-_102513843_102513908	0.00577371	UGACAUC	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr4_+_75858290_75858305	0.00572271	UGACAUC	ENST00000513238.1|PARM1|ENSG00000169116.7|prostate androgen-regulated mucin-like protein 1
hg19_v2_chr20_+_10199468_10199516	0.00563764	UGACAUC	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr2_-_178937478_178937510	0.00563315	UGACAUC	ENST00000286063.6|PDE11A|ENSG00000128655.12|phosphodiesterase 11A
hg19_v2_chr11_-_106889250_106889264	0.00556336	UGACAUC	ENST00000526355.2|GUCY1A2|ENSG00000152402.6|guanylate cyclase 1, soluble, alpha 2
hg19_v2_chr12_+_54943134_54943182	0.00556256	UGACAUC	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr15_-_49255632_49255650	0.00539978	UGACAUC	ENST00000332408.4|SHC4|ENSG00000185634.7|SHC (Src homology 2 domain containing) family, member 4
hg19_v2_chr4_-_24914508_24914524	0.00539961	UGACAUC	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr5_-_172756506_172756574	0.00521224	UGACAUC	ENST00000265087.4|STC2|ENSG00000113739.6|stanniocalcin 2
hg19_v2_chr1_-_244013384_244013430	0.00514592	UGACAUC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr14_+_90863327_90863356	0.00509885	UGACAUC	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr20_-_10654639_10654694	0.00498146	UGACAUC	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr12_-_56583332_56583369	0.00492595	UGACAUC	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr7_+_12250886_12250933	0.00471694	UGACAUC	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr20_+_49348081_49348096	0.00466317	UGACAUC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr11_+_105480793_105480848	0.00463484	UGACAUC	ENST00000282499.5|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000393127.2|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000527669.1|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4
hg19_v2_chr18_+_21693306_21693322	0.004607	UGACAUC	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr8_+_132916318_132916401	0.00455792	UGACAUC	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr18_+_32558208_32558340	0.00438702	UGACAUC	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr9_-_6015607_6015634	0.00434345	UGACAUC	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr7_-_98741642_98741713	0.00421228	UGACAUC	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_171810606_171810649	0.00415546	UGACAUC	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr1_+_201252580_201252640	0.00402865	UGACAUC	ENST00000367324.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 	ENST00000263946.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg19_v2_chr20_-_45984401_45984514	0.00398731	UGACAUC	ENST00000311275.7|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr5_+_138629417_138629467	0.00398136	UGACAUC	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr2_+_201170703_201170716	0.00397004	UGACAUC	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chrX_-_77041685_77041716	0.0036765	UGACAUC	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr2_-_27938593_27938615	0.00364163	UGACAUC	ENST00000379677.2|AC074091.13|ENSG00000205334.2|Uncharacterized protein
hg19_v2_chr5_+_109025067_109025146	0.00356514	UGACAUC	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr8_+_28351707_28351781	0.00354848	UGACAUC	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr17_+_54911444_54911564	0.00340812	UGACAUC	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr5_+_140560980_140560980	0.00325623	UGACAUC	ENST00000361016.2|PCDHB16|ENSG00000196963.2|protocadherin beta 16
hg19_v2_chr4_-_42154895_42154895	0.00317815	UGACAUC	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr2_+_203499901_203499911	0.00311012	UGACAUC	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr1_-_114355083_114355123	0.00309429	UGACAUC	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr2_+_32582086_32582106	0.00295198	UGACAUC	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chr15_-_56757329_56757342	0.00276008	UGACAUC	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr16_+_50187556_50187779	0.00266475	UGACAUC	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr15_-_34394119_34394149	0.00252002	UGACAUC	ENST00000256545.4|EMC7|ENSG00000134153.5|ER membrane protein complex subunit 7
hg19_v2_chr2_+_61404624_61404666	0.00248983	UGACAUC	ENST00000394457.3|AHSA2|ENSG00000173209.18|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
hg19_v2_chr9_+_82186872_82186898	0.00248846	UGACAUC	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chrX_-_118986911_118986988	0.00241929	UGACAUC	ENST00000276201.2|UPF3B|ENSG00000125351.6|UPF3 regulator of nonsense transcripts homolog B (yeast) 	ENST00000345865.2|UPF3B|ENSG00000125351.6|UPF3 regulator of nonsense transcripts homolog B (yeast)
hg19_v2_chr1_-_22109682_22109719	0.00240608	UGACAUC	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr18_+_59854480_59854551	0.00224407	UGACAUC	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr1_+_26798955_26799010	0.00218522	UGACAUC	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr2_-_158485387_158485517	0.00208488	UGACAUC	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr18_-_65184217_65184217	0.00207478	UGACAUC	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr1_+_111991474_111991558	0.00201123	UGACAUC	ENST00000369722.3|ATP5F1|ENSG00000116459.6|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v2_chr17_+_45608430_45608490	0.00198067	UGACAUC	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr18_+_63418068_63418157	0.00191679	UGACAUC	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr1_-_205782304_205782332	0.00190792	UGACAUC	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr6_-_24911195_24911343	0.00185027	UGACAUC	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr2_+_28974668_28974729	0.00183842	UGACAUC	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr10_-_27443155_27443288	0.00180959	UGACAUC	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr18_+_49866496_49866548	0.00175324	UGACAUC	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr7_-_138666053_138666146	0.00172659	UGACAUC	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr2_-_172017343_172017391	0.00171901	UGACAUC	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr14_+_57046500_57046529	0.00169356	UGACAUC	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr8_-_122653630_122653661	0.00160671	UGACAUC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr5_+_172261228_172261287	0.00154128	UGACAUC	ENST00000393784.3|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chr8_-_77912431_77912503	0.00148969	UGACAUC	ENST00000357039.4|PEX2|ENSG00000164751.10|peroxisomal biogenesis factor 2 	ENST00000522527.1|PEX2|ENSG00000164751.10|peroxisomal biogenesis factor 2
hg19_v2_chr18_+_22040593_22040616	0.0012271	UGACAUC	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr2_-_38978492_38978636	0.00100386	UGACAUC	ENST00000409276.1|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7 	ENST00000446327.2|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7 	ENST00000313117.6|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7
hg19_v2_chr4_-_111544254_111544270	0.000991397	UGACAUC	ENST00000306732.3|PITX2|ENSG00000164093.11|paired-like homeodomain 2
hg19_v2_chr13_-_77900814_77900935	0.000921288	UGACAUC	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr1_-_108507631_108507809	0.000877424	UGACAUC	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr1_+_206808918_206808931	0.000749207	UGACAUC	ENST00000367108.3|DYRK3|ENSG00000143479.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
hg19_v2_chr9_+_120466650_120466659	0.000731105	UGACAUC	ENST00000355622.6|TLR4|ENSG00000136869.13|toll-like receptor 4
hg19_v2_chr7_-_86688990_86689026	0.000720279	UGACAUC	ENST00000450689.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr3_-_178790057_178790072	0.000630604	UGACAUC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chrX_+_122993827_122993910	0.000596566	UGACAUC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr3_+_145782358_145782358	0.000455225	UGACAUC	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
hg19_v2_chr18_+_22006580_22006614	0.000270464	UGACAUC	ENST00000284202.4|IMPACT|ENSG00000154059.5|impact RWD domain protein
hg19_v2_chr3_+_29322803_29322850	0.000236798	UGACAUC	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr2_-_161350305_161350391	0.000129047	UGACAUC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
