hg19_v2_chr9_+_78505581_78505621	0.324894	UCCAGUU	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr18_-_51751132_51751158	0.2707	UCCAGUU	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr10_+_18948311_18948417	0.264185	UCCAGUU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr12_-_93323013_93323112	0.263819	UCCAGUU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr3_+_141205852_141205929	0.258432	UCCAGUU	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr10_+_111767720_111767752	0.23673	UCCAGUU	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr4_+_103790120_103790186	0.235446	UCCAGUU	ENST00000273986.4|CISD2|ENSG00000145354.5|CDGSH iron sulfur domain 2
hg19_v2_chrX_-_108976521_108976632	0.230612	UCCAGUU	ENST00000469796.2|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000502391.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000508092.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000340800.2|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4 	ENST00000348502.6|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr10_+_5454505_5454540	0.212567	UCCAGUU	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr12_+_27396901_27397108	0.207139	UCCAGUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr6_+_139349817_139349899	0.203459	UCCAGUU	ENST00000367660.3|ABRACL|ENSG00000146386.7|ABRA C-terminal like
hg19_v2_chr1_+_218519577_218519594	0.198785	UCCAGUU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr18_+_3247413_3247533	0.19116	UCCAGUU	ENST00000579226.1|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric 	ENST00000217652.3|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric
hg19_v2_chr3_-_156877997_156878004	0.186951	UCCAGUU	ENST00000295926.3|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr10_+_70883908_70884003	0.184012	UCCAGUU	ENST00000263559.6|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000395098.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000546041.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000541711.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe)
hg19_v2_chr7_+_114562172_114562243	0.181915	UCCAGUU	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr3_-_101232019_101232085	0.180367	UCCAGUU	ENST00000394095.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394091.1|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394094.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000358203.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000348610.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000314261.7|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7
hg19_v2_chr10_-_60027642_60027705	0.174826	UCCAGUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr10_-_25012597_25012732	0.173825	UCCAGUU	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr18_-_18691739_18691812	0.172487	UCCAGUU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr2_-_106810783_106810795	0.171567	UCCAGUU	ENST00000283148.7|UXS1|ENSG00000115652.10|UDP-glucuronate decarboxylase 1
hg19_v2_chr4_-_140098339_140098392	0.170904	UCCAGUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr5_-_39425068_39425098	0.170842	UCCAGUU	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr3_+_110790590_110790603	0.169809	UCCAGUU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr17_+_45727204_45727220	0.169683	UCCAGUU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chrX_+_100663243_100663283	0.166984	UCCAGUU	ENST00000316594.5|HNRNPH2|ENSG00000126945.8|heterogeneous nuclear ribonucleoprotein H2 (H')
hg19_v2_chr5_+_115177178_115177178	0.166418	UCCAGUU	ENST00000316788.7|AP3S1|ENSG00000177879.10|adaptor-related protein complex 3, sigma 1 subunit
hg19_v2_chr16_-_85722530_85722615	0.159412	UCCAGUU	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr10_+_27793197_27793247	0.156255	UCCAGUU	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr6_+_71122974_71123011	0.155055	UCCAGUU	ENST00000418814.2|FAM135A|ENSG00000082269.12|family with sequence similarity 135, member A
hg19_v2_chr11_-_102323489_102323576	0.154489	UCCAGUU	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr1_-_51984908_51984952	0.153909	UCCAGUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr11_+_86748863_86748948	0.153598	UCCAGUU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr20_-_62462566_62462631	0.153128	UCCAGUU	ENST00000245663.4|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46 	ENST00000302995.2|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46
hg19_v2_chr2_-_201828356_201828412	0.151909	UCCAGUU	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr9_+_114659046_114659102	0.151383	UCCAGUU	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr8_-_23712312_23712328	0.150695	UCCAGUU	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr18_-_45456930_45456970	0.150054	UCCAGUU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr13_+_73632897_73632930	0.148285	UCCAGUU	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr3_-_182698381_182698431	0.147861	UCCAGUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr15_-_52821247_52821295	0.146203	UCCAGUU	ENST00000399231.3|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin) 	ENST00000399233.2|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin)
hg19_v2_chr12_-_112037306_112037480	0.144993	UCCAGUU	ENST00000535949.1|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000542287.2|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000377617.3|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000550104.1|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr5_-_111754948_111755013	0.14459	UCCAGUU	ENST00000261486.5|EPB41L4A|ENSG00000129595.8|erythrocyte membrane protein band 4.1 like 4A
hg19_v2_chr3_+_180630090_180630311	0.143999	UCCAGUU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr7_+_77166592_77166653	0.143727	UCCAGUU	ENST00000248594.6|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr2_+_153191706_153191751	0.143609	UCCAGUU	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr1_-_115259337_115259515	0.143364	UCCAGUU	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr5_+_102455853_102455961	0.143094	UCCAGUU	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr1_-_171711387_171711420	0.142461	UCCAGUU	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chrX_-_83442915_83442985	0.141749	UCCAGUU	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr2_-_242212227_242212301	0.141269	UCCAGUU	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr5_-_56247935_56247959	0.140032	UCCAGUU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr2_+_9346892_9346948	0.139743	UCCAGUU	ENST00000281419.3|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENST00000315273.4|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
hg19_v2_chr5_-_121413974_121413986	0.139719	UCCAGUU	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr8_+_95732095_95732159	0.138405	UCCAGUU	ENST00000414645.2|DPY19L4|ENSG00000156162.12|dpy-19-like 4 (C. elegans)
hg19_v2_chr4_-_80994210_80994284	0.135992	UCCAGUU	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr7_+_116139424_116139444	0.135087	UCCAGUU	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr3_+_140770183_140770244	0.134436	UCCAGUU	ENST00000310546.2|SPSB4|ENSG00000175093.4|splA/ryanodine receptor domain and SOCS box containing 4
hg19_v2_chr5_+_122181184_122181213	0.133729	UCCAGUU	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr11_-_77532050_77532066	0.133108	UCCAGUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr4_+_26862400_26862416	0.132481	UCCAGUU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr12_+_72148614_72148699	0.132342	UCCAGUU	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr10_+_17686124_17686192	0.131158	UCCAGUU	ENST00000377524.3|STAM|ENSG00000136738.10|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
hg19_v2_chr7_-_131241361_131241398	0.129863	UCCAGUU	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr18_+_2655692_2655737	0.128301	UCCAGUU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr9_-_123964114_123964210	0.126866	UCCAGUU	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr12_-_96184533_96184549	0.126664	UCCAGUU	ENST00000343702.4|NTN4|ENSG00000074527.7|netrin 4 	ENST00000344911.4|NTN4|ENSG00000074527.7|netrin 4
hg19_v2_chr11_+_9406169_9406210	0.125595	UCCAGUU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr13_-_45915221_45915347	0.125496	UCCAGUU	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr13_-_77601282_77601308	0.125191	UCCAGUU	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr2_-_148778258_148778319	0.124604	UCCAGUU	ENST00000392857.5|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000457954.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000392858.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000542387.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4
hg19_v2_chr2_-_219433014_219433100	0.124508	UCCAGUU	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chrX_+_100645812_100646008	0.124462	UCCAGUU	ENST00000427805.2|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000553110.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000392994.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000409338.1|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough 	ENST00000409170.3|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough
hg19_v2_chr14_-_45431091_45431175	0.122152	UCCAGUU	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr8_-_42751820_42751874	0.121066	UCCAGUU	ENST00000526349.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000527424.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000534961.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000319073.4|RNF170|ENSG00000120925.9|ring finger protein 170
hg19_v2_chr3_-_141944398_141944465	0.120504	UCCAGUU	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chr6_+_151561085_151561146	0.120006	UCCAGUU	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr3_-_9291063_9291136	0.119136	UCCAGUU	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr1_-_70671216_70671303	0.118256	UCCAGUU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr1_+_193091080_193091222	0.117808	UCCAGUU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr3_+_171758344_171758358	0.116454	UCCAGUU	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr14_+_67707826_67707994	0.116086	UCCAGUU	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr12_-_122907091_122907186	0.115871	UCCAGUU	ENST00000358808.2|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000361654.4|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000539080.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000537178.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr8_-_74791051_74791145	0.11535	UCCAGUU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr18_+_9913977_9914088	0.114475	UCCAGUU	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr11_+_9685604_9685706	0.114124	UCCAGUU	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr6_-_137113604_137113666	0.112803	UCCAGUU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr13_-_41240717_41240735	0.111504	UCCAGUU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr1_-_94374946_94374994	0.111092	UCCAGUU	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr20_-_56884489_56884515	0.109485	UCCAGUU	ENST00000334187.8|PPP4R1L|ENSG00000124224.12|protein phosphatase 4, regulatory subunit 1-like 	ENST00000244070.3|PPP4R1L|ENSG00000124224.12|protein phosphatase 4, regulatory subunit 1-like
hg19_v2_chr17_-_40306934_40307035	0.109381	UCCAGUU	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr6_+_117586713_117586737	0.109044	UCCAGUU	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chrX_+_119384607_119384720	0.108696	UCCAGUU	ENST00000326624.2|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33 	ENST00000557385.1|ZBTB33|ENSG00000177485.6|zinc finger and BTB domain containing 33
hg19_v2_chr2_+_108443388_108443393	0.106773	UCCAGUU	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chr3_-_195808952_195808972	0.106339	UCCAGUU	ENST00000540528.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000392396.3|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000535031.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000420415.1|TFRC|ENSG00000072274.8|transferrin receptor
hg19_v2_chr3_+_196295482_196295559	0.105598	UCCAGUU	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chr5_+_86564739_86564791	0.104595	UCCAGUU	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr1_-_185286461_185286482	0.103702	UCCAGUU	ENST00000367498.3|IVNS1ABP|ENSG00000116679.11|influenza virus NS1A binding protein
hg19_v2_chr12_+_72233487_72233563	0.103374	UCCAGUU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr3_+_9404526_9404782	0.103059	UCCAGUU	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr9_-_125675576_125675612	0.102348	UCCAGUU	ENST00000373659.3|ZBTB6|ENSG00000186130.4|zinc finger and BTB domain containing 6
hg19_v2_chr11_+_34073195_34073266	0.101426	UCCAGUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr11_-_32816156_32816187	0.101425	UCCAGUU	ENST00000531481.1|CCDC73|ENSG00000186714.8|coiled-coil domain containing 73 	ENST00000335185.5|CCDC73|ENSG00000186714.8|coiled-coil domain containing 73
hg19_v2_chr5_-_36152031_36152063	0.0986696	UCCAGUU	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr21_+_40177143_40177231	0.0980966	UCCAGUU	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr5_+_60628074_60628100	0.0958213	UCCAGUU	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chrX_+_154299753_154299807	0.0951664	UCCAGUU	ENST00000369459.2|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000369462.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000411985.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000399042.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3
hg19_v2_chr6_-_111804393_111804436	0.0948163	UCCAGUU	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr1_-_205601064_205601090	0.0943922	UCCAGUU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr10_-_74856608_74856732	0.0943622	UCCAGUU	ENST00000307116.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000373008.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000412021.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000394890.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000263556.3|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000440381.1|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I
hg19_v2_chr1_+_200708671_200708744	0.0937924	UCCAGUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr10_-_14590644_14590669	0.093187	UCCAGUU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr12_+_53399942_53400071	0.0931483	UCCAGUU	ENST00000262056.9|EIF4B|ENSG00000063046.13|eukaryotic translation initiation factor 4B
hg19_v2_chr9_-_34523027_34523039	0.0926813	UCCAGUU	ENST00000399775.2|ENHO|ENSG00000168913.6|energy homeostasis associated
hg19_v2_chr10_-_32636106_32636150	0.0919975	UCCAGUU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr7_-_83824169_83824217	0.0915417	UCCAGUU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr13_+_80055284_80055295	0.0909007	UCCAGUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr7_-_23053693_23053715	0.0906087	UCCAGUU	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr4_+_184020398_184020463	0.0898823	UCCAGUU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr11_-_10315741_10315773	0.0895438	UCCAGUU	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr7_-_92463210_92463231	0.0894281	UCCAGUU	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr6_-_139695757_139695795	0.08787	UCCAGUU	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr11_-_86666427_86666450	0.0870424	UCCAGUU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr20_+_61427797_61427863	0.0870071	UCCAGUU	ENST00000370487.3|MRGBP|ENSG00000101189.5|MRG/MORF4L binding protein
hg19_v2_chr4_-_68566832_68566897	0.0866732	UCCAGUU	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chrX_-_24045303_24045303	0.0861785	UCCAGUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr3_-_9005118_9005186	0.0858377	UCCAGUU	ENST00000264926.2|RAD18|ENSG00000070950.5|RAD18 homolog (S. cerevisiae)
hg19_v2_chr7_-_79082867_79082900	0.0852104	UCCAGUU	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr1_-_1822495_1822571	0.0852034	UCCAGUU	ENST00000378609.4|GNB1|ENSG00000078369.13|guanine nucleotide binding protein (G protein), beta polypeptide 1
hg19_v2_chr5_+_174905398_174905507	0.0828328	UCCAGUU	ENST00000321442.5|SFXN1|ENSG00000164466.8|sideroflexin 1
hg19_v2_chr12_-_95611149_95611249	0.0825745	UCCAGUU	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr17_-_49337392_49337465	0.0821285	UCCAGUU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr1_-_154155595_154155673	0.0817446	UCCAGUU	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr3_+_57261743_57261824	0.0809891	UCCAGUU	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr9_+_4679555_4679617	0.08026	UCCAGUU	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr10_-_102046098_102046122	0.0788033	UCCAGUU	ENST00000441611.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr9_-_74525658_74525658	0.0784296	UCCAGUU	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr12_-_39837192_39837206	0.078284	UCCAGUU	ENST00000361961.3|KIF21A|ENSG00000139116.13|kinesin family member 21A 	ENST00000395670.3|KIF21A|ENSG00000139116.13|kinesin family member 21A
hg19_v2_chr17_+_70117153_70117174	0.0782753	UCCAGUU	ENST00000245479.2|SOX9|ENSG00000125398.5|SRY (sex determining region Y)-box 9
hg19_v2_chr6_-_11232891_11232915	0.0780098	UCCAGUU	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr12_+_56473628_56473680	0.0778268	UCCAGUU	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr4_+_146402925_146402957	0.0775212	UCCAGUU	ENST00000302085.4|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr13_-_45992473_45992524	0.0773581	UCCAGUU	ENST00000539591.1|SLC25A30|ENSG00000174032.12|solute carrier family 25, member 30 	ENST00000519676.1|SLC25A30|ENSG00000174032.12|solute carrier family 25, member 30 	ENST00000519547.1|SLC25A30|ENSG00000174032.12|solute carrier family 25, member 30
hg19_v2_chr11_+_33278811_33279133	0.0767955	UCCAGUU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr5_-_157286104_157286188	0.0765767	UCCAGUU	ENST00000530742.1|CLINT1|ENSG00000113282.9|clathrin interactor 1 	ENST00000523908.1|CLINT1|ENSG00000113282.9|clathrin interactor 1 	ENST00000523094.1|CLINT1|ENSG00000113282.9|clathrin interactor 1 	ENST00000296951.5|CLINT1|ENSG00000113282.9|clathrin interactor 1 	ENST00000411809.2|CLINT1|ENSG00000113282.9|clathrin interactor 1
hg19_v2_chr22_+_31795509_31795567	0.0763698	UCCAGUU	ENST00000331457.4|DRG1|ENSG00000185721.7|developmentally regulated GTP binding protein 1
hg19_v2_chr5_-_132073210_132073330	0.0758397	UCCAGUU	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr14_-_50698276_50698304	0.0755635	UCCAGUU	ENST00000216373.5|SOS2|ENSG00000100485.7|son of sevenless homolog 2 (Drosophila)
hg19_v2_chr7_+_135347215_135347296	0.073875	UCCAGUU	ENST00000507606.1|C7orf73|ENSG00000243317.3|chromosome 7 open reading frame 73
hg19_v2_chr14_-_31676964_31677017	0.0730754	UCCAGUU	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr2_+_79740118_79740210	0.0729333	UCCAGUU	ENST00000496558.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2 	ENST00000451966.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2
hg19_v2_chr1_+_89990431_89990493	0.0724037	UCCAGUU	ENST00000330947.2|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B 	ENST00000358200.4|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr7_-_6866401_6866401	0.0718723	UCCAGUU	ENST00000316731.8|CCZ1B|ENSG00000146574.11|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
hg19_v2_chr10_-_131762105_131762105	0.0717755	UCCAGUU	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chrX_-_3631635_3631698	0.071012	UCCAGUU	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr21_-_34144157_34144175	0.070589	UCCAGUU	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr15_+_52121822_52121833	0.0689404	UCCAGUU	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr6_+_76458909_76458934	0.068939	UCCAGUU	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr4_-_24586140_24586188	0.0683863	UCCAGUU	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chrX_+_135579670_135579715	0.0680114	UCCAGUU	ENST00000218364.4|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
hg19_v2_chr1_+_178511876_178511950	0.067286	UCCAGUU	ENST00000367638.1|C1orf220|ENSG00000213057.4|chromosome 1 open reading frame 220 	ENST00000367636.4|C1ORF220|ENSG00000184909.8|C1ORF220
hg19_v2_chr2_-_107084826_107084832	0.0671301	UCCAGUU	ENST00000304514.7|RGPD3|ENSG00000153165.14|RANBP2-like and GRIP domain containing 3 	ENST00000409886.3|RGPD3|ENSG00000153165.14|RANBP2-like and GRIP domain containing 3
hg19_v2_chr5_-_60458179_60458310	0.0669102	UCCAGUU	ENST00000507416.1|SMIM15|ENSG00000188725.3|small integral membrane protein 15 	ENST00000339020.3|SMIM15|ENSG00000188725.3|small integral membrane protein 15
hg19_v2_chr1_+_76540386_76540445	0.0667804	UCCAGUU	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr2_-_174830430_174830563	0.0667511	UCCAGUU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr3_+_140660634_140660729	0.0666905	UCCAGUU	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr1_+_160085501_160085563	0.0663563	UCCAGUU	ENST00000361216.3|ATP1A2|ENSG00000018625.10|ATPase, Na+/K+ transporting, alpha 2 polypeptide
hg19_v2_chr13_+_53226963_53227023	0.0658793	UCCAGUU	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr3_+_73045936_73046128	0.0646031	UCCAGUU	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr17_+_58677539_58677610	0.0644668	UCCAGUU	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr3_-_71774516_71774587	0.064024	UCCAGUU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr1_+_89149905_89149995	0.0636165	UCCAGUU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr13_+_49550015_49550070	0.0636149	UCCAGUU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr17_+_21279509_21279697	0.0632945	UCCAGUU	ENST00000583088.1|KCNJ12|ENSG00000184185.5|potassium inwardly-rectifying channel, subfamily J, member 12
hg19_v2_chr7_-_75988321_75988348	0.0632287	UCCAGUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr8_-_125384927_125384952	0.0627836	UCCAGUU	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr5_+_151151471_151151496	0.0626415	UCCAGUU	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr11_-_46142948_46143043	0.0621434	UCCAGUU	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr1_-_94703118_94703189	0.0620941	UCCAGUU	ENST00000260526.6|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29 	ENST00000370217.3|ARHGAP29|ENSG00000137962.8|Rho GTPase activating protein 29
hg19_v2_chr15_-_35261996_35262040	0.0619738	UCCAGUU	ENST00000156471.5|AQR|ENSG00000021776.6|aquarius intron-binding spliceosomal factor
hg19_v2_chr2_+_70485220_70485293	0.0617953	UCCAGUU	ENST00000433351.2|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1 	ENST00000264441.5|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1
hg19_v2_chr3_+_16926441_16926463	0.0617748	UCCAGUU	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr13_-_29069232_29069272	0.0613991	UCCAGUU	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr5_+_56111361_56111403	0.0612504	UCCAGUU	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr5_+_56469775_56469837	0.0605516	UCCAGUU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr4_-_78740511_78740544	0.0604996	UCCAGUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr10_+_60272814_60272900	0.0601099	UCCAGUU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr4_+_81187753_81187827	0.0598078	UCCAGUU	ENST00000312465.7|FGF5|ENSG00000138675.12|fibroblast growth factor 5 	ENST00000456523.3|FGF5|ENSG00000138675.12|fibroblast growth factor 5
hg19_v2_chr7_+_94285637_94285689	0.0586927	UCCAGUU	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr1_-_154842741_154842772	0.0582907	UCCAGUU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr9_+_19408999_19409057	0.0580599	UCCAGUU	ENST00000340967.2|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr7_+_5938351_5938379	0.0577957	UCCAGUU	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr2_-_24149977_24150007	0.0577387	UCCAGUU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr3_+_169684553_169684616	0.056882	UCCAGUU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr16_+_9185450_9185516	0.0568649	UCCAGUU	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr8_+_98656336_98656535	0.0567171	UCCAGUU	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr15_+_68871308_68871354	0.0566431	UCCAGUU	ENST00000261861.5|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr1_+_86046433_86046453	0.0566033	UCCAGUU	ENST00000451137.2|CYR61|ENSG00000142871.11|cysteine-rich, angiogenic inducer, 61
hg19_v2_chr4_+_25235597_25235692	0.0564091	UCCAGUU	ENST00000264864.6|PI4K2B|ENSG00000038210.9|phosphatidylinositol 4-kinase type 2 beta
hg19_v2_chr3_-_148804275_148804346	0.0561453	UCCAGUU	ENST00000392912.2|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000465259.1|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000310053.5|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000494055.1|HLTF|ENSG00000071794.11|helicase-like transcription factor
hg19_v2_chr18_+_60190226_60190314	0.0552668	UCCAGUU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr20_+_16729003_16729003	0.0546871	UCCAGUU	ENST00000246081.2|OTOR|ENSG00000125879.4|otoraplin
hg19_v2_chr15_-_83316254_83316368	0.0540604	UCCAGUU	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr1_-_173991434_173991556	0.0539322	UCCAGUU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr2_-_9695847_9695966	0.0530943	UCCAGUU	ENST00000310823.3|ADAM17|ENSG00000151694.8|ADAM metallopeptidase domain 17 	ENST00000497134.1|ADAM17|ENSG00000151694.8|ADAM metallopeptidase domain 17
hg19_v2_chr7_+_91570165_91570197	0.0527189	UCCAGUU	ENST00000356239.3|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000359028.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000358100.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9
hg19_v2_chr9_+_100263912_100263988	0.0526544	UCCAGUU	ENST00000259365.4|TMOD1|ENSG00000136842.9|tropomodulin 1
hg19_v2_chr3_+_69134080_69134101	0.0525881	UCCAGUU	ENST00000273258.3|ARL6IP5|ENSG00000144746.6|ADP-ribosylation-like factor 6 interacting protein 5
hg19_v2_chr1_-_67519782_67519810	0.0521016	UCCAGUU	ENST00000235345.5|SLC35D1|ENSG00000116704.6|solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
hg19_v2_chr14_-_23388338_23388393	0.0511518	UCCAGUU	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr5_-_171711061_171711076	0.051063	UCCAGUU	ENST00000393792.2|UBTD2|ENSG00000168246.5|ubiquitin domain containing 2
hg19_v2_chrX_-_77041685_77041716	0.0509506	UCCAGUU	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr15_-_83621435_83621495	0.0507698	UCCAGUU	ENST00000450735.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000426485.1|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000399166.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000304231.8|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila)
hg19_v2_chr2_-_157189180_157189290	0.0503647	UCCAGUU	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr7_-_139876812_139876860	0.0502973	UCCAGUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr5_+_167181917_167181979	0.0502112	UCCAGUU	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr5_+_142149955_142150000	0.0500484	UCCAGUU	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr9_-_102861267_102861322	0.0498126	UCCAGUU	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr11_-_18656028_18656040	0.0494449	UCCAGUU	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr6_-_693074_693150	0.0494073	UCCAGUU	ENST00000230449.4|EXOC2|ENSG00000112685.9|exocyst complex component 2 	ENST00000443083.1|EXOC2|ENSG00000112685.9|exocyst complex component 2 	ENST00000448181.3|EXOC2|ENSG00000112685.9|exocyst complex component 2
hg19_v2_chr3_+_111578027_111578080	0.0490748	UCCAGUU	ENST00000431670.2|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2 	ENST00000412622.1|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chr5_-_82373260_82373315	0.0488763	UCCAGUU	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr6_+_133562472_133562556	0.04886	UCCAGUU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr1_+_224301787_224301836	0.0487661	UCCAGUU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr1_-_101491319_101491355	0.048146	UCCAGUU	ENST00000342173.7|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000488176.1|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000370109.3|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5
hg19_v2_chr2_+_110551851_110551977	0.0477714	UCCAGUU	ENST00000272454.6|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000430736.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000016946.3|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000441344.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5
hg19_v2_chr22_+_21271714_21271770	0.0468911	UCCAGUU	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr2_-_136288113_136288301	0.0464523	UCCAGUU	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chrX_-_20284958_20285039	0.0458838	UCCAGUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr6_+_147830063_147830063	0.0451658	UCCAGUU	ENST00000367474.1|SAMD5|ENSG00000203727.3|sterile alpha motif domain containing 5
hg19_v2_chr9_+_131445928_131445934	0.0451626	UCCAGUU	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr12_-_31744031_31744059	0.0450509	UCCAGUU	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr2_+_204192942_204193038	0.0449597	UCCAGUU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr11_-_128392085_128392232	0.0447975	UCCAGUU	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr12_-_48499591_48499663	0.0447671	UCCAGUU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr2_+_16080659_16080686	0.0439653	UCCAGUU	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr2_+_26568965_26569025	0.0434277	UCCAGUU	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr5_-_133304473_133304489	0.0431834	UCCAGUU	ENST00000231512.3|C5orf15|ENSG00000113583.6|chromosome 5 open reading frame 15
hg19_v2_chr1_-_231473578_231473619	0.0430997	UCCAGUU	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr5_+_135468516_135468621	0.0430903	UCCAGUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr17_-_38020392_38020477	0.0429367	UCCAGUU	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr12_+_69864129_69864222	0.0428918	UCCAGUU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr6_-_83902933_83903012	0.0427995	UCCAGUU	ENST00000512866.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000510258.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000503094.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000283977.4|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000513973.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000508748.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3
hg19_v2_chr6_+_25279651_25279727	0.0426223	UCCAGUU	ENST00000329474.6|LRRC16A|ENSG00000079691.15|leucine rich repeat containing 16A
hg19_v2_chr5_+_172483347_172483407	0.0423788	UCCAGUU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr9_-_3525968_3526016	0.0422366	UCCAGUU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr3_-_120461378_120461389	0.0421768	UCCAGUU	ENST00000273375.3|RABL3|ENSG00000144840.4|RAB, member of RAS oncogene family-like 3
hg19_v2_chr1_+_39456895_39456986	0.0421729	UCCAGUU	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr2_+_114647504_114647557	0.0418636	UCCAGUU	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr6_+_163835669_163835693	0.0417882	UCCAGUU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_-_79287060_79287093	0.0415732	UCCAGUU	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr8_+_27631903_27632045	0.0412726	UCCAGUU	ENST00000305188.8|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr17_-_47755436_47755596	0.0409403	UCCAGUU	ENST00000505581.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000514121.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393328.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000509079.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393331.3|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000347630.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000504102.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr17_-_58603568_58603610	0.0405567	UCCAGUU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr17_-_62207485_62207511	0.0400511	UCCAGUU	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chr1_-_205719295_205719404	0.0399681	UCCAGUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr12_-_76478686_76478813	0.039789	UCCAGUU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr2_+_204571198_204571283	0.0393724	UCCAGUU	ENST00000374481.3|CD28|ENSG00000178562.13|CD28 molecule 	ENST00000458610.2|CD28|ENSG00000178562.13|CD28 molecule 	ENST00000324106.8|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr1_+_10459111_10459175	0.0390973	UCCAGUU	ENST00000541529.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000270776.8|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000483936.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000538557.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase
hg19_v2_chr1_+_64936428_64936475	0.0380092	UCCAGUU	ENST00000371073.2|CACHD1|ENSG00000158966.9|cache domain containing 1 	ENST00000290039.5|CACHD1|ENSG00000158966.9|cache domain containing 1
hg19_v2_chr1_+_29063271_29063283	0.0380091	UCCAGUU	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr3_-_142166904_142166916	0.0378911	UCCAGUU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr20_-_4804244_4804293	0.0373604	UCCAGUU	ENST00000379400.3|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr19_+_16187085_16187119	0.037304	UCCAGUU	ENST00000300933.4|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr5_+_78908233_78908316	0.0370862	UCCAGUU	ENST00000453514.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000423041.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000504233.1|PAPD4|ENSG00000164329.9|PAP associated domain containing 4 	ENST00000428308.2|PAPD4|ENSG00000164329.9|PAP associated domain containing 4
hg19_v2_chrX_-_73834449_73834481	0.0367781	UCCAGUU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr14_-_57735528_57735726	0.0362665	UCCAGUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr6_-_117923520_117923529	0.0358376	UCCAGUU	ENST00000368498.2|GOPC|ENSG00000047932.9|golgi-associated PDZ and coiled-coil motif containing
hg19_v2_chr11_+_32914579_32914724	0.0355257	UCCAGUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr5_-_133512683_133512729	0.0353752	UCCAGUU	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr17_-_7120525_7120666	0.0349798	UCCAGUU	ENST00000447163.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000399506.2|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000302955.6|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
hg19_v2_chr8_+_26435359_26435426	0.034761	UCCAGUU	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr1_+_33005020_33005077	0.0346046	UCCAGUU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr9_-_27529726_27529827	0.0344529	UCCAGUU	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr7_-_105517021_105517050	0.0341059	UCCAGUU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr14_-_23652849_23652883	0.0340723	UCCAGUU	ENST00000316902.7|SLC7A8|ENSG00000092068.14|solute carrier family 7 (amino acid transporter light chain, L system), member 8 	ENST00000469263.1|SLC7A8|ENSG00000092068.14|solute carrier family 7 (amino acid transporter light chain, L system), member 8 	ENST00000525062.1|SLC7A8|ENSG00000092068.14|solute carrier family 7 (amino acid transporter light chain, L system), member 8 	ENST00000524758.1|SLC7A8|ENSG00000092068.14|solute carrier family 7 (amino acid transporter light chain, L system), member 8
hg19_v2_chr12_-_124018252_124018279	0.0334795	UCCAGUU	ENST00000376874.4|RILPL1|ENSG00000188026.7|Rab interacting lysosomal protein-like 1
hg19_v2_chr5_+_134094461_134094494	0.0334479	UCCAGUU	ENST00000452510.2|DDX46|ENSG00000145833.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENST00000354283.4|DDX46|ENSG00000145833.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
hg19_v2_chr9_+_129567282_129567353	0.0334321	UCCAGUU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr2_-_55920952_55921045	0.0331257	UCCAGUU	ENST00000447944.2|PNPT1|ENSG00000138035.10|polyribonucleotide nucleotidyltransferase 1
hg19_v2_chr2_+_136499179_136499228	0.0329456	UCCAGUU	ENST00000272638.9|UBXN4|ENSG00000144224.12|UBX domain protein 4
hg19_v2_chr12_-_46766577_46766650	0.032576	UCCAGUU	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chrX_-_80065146_80065250	0.0325545	UCCAGUU	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr6_-_116575226_116575278	0.0323921	UCCAGUU	ENST00000420283.1|TSPYL4|ENSG00000187189.9|TSPY-like 4
hg19_v2_chr2_+_203879568_203879611	0.0323916	UCCAGUU	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr17_-_15165854_15165906	0.0320183	UCCAGUU	ENST00000395936.1|PMP22|ENSG00000109099.9|peripheral myelin protein 22 	ENST00000395938.2|PMP22|ENSG00000109099.9|peripheral myelin protein 22
hg19_v2_chr17_+_4487294_4487307	0.0319769	UCCAGUU	ENST00000338859.4|SMTNL2|ENSG00000188176.7|smoothelin-like 2
hg19_v2_chr2_+_148602058_148602185	0.0318658	UCCAGUU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chrX_-_119445263_119445298	0.0314773	UCCAGUU	ENST00000309720.5|TMEM255A|ENSG00000125355.11|transmembrane protein 255A
hg19_v2_chr10_+_102222798_102222798	0.0314347	UCCAGUU	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr9_+_128509624_128509658	0.0314248	UCCAGUU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr1_-_183604794_183604908	0.0314132	UCCAGUU	ENST00000367534.1|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000359856.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000294742.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa
hg19_v2_chr15_+_44829255_44829331	0.031382	UCCAGUU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr10_+_72164135_72164135	0.0311793	UCCAGUU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr18_+_67068228_67068291	0.0309886	UCCAGUU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr13_-_99630233_99630348	0.0307064	UCCAGUU	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr11_-_33183006_33183046	0.0303978	UCCAGUU	ENST00000524827.1|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000323959.4|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000431742.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr5_-_168006591_168006638	0.0295262	UCCAGUU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr13_+_113622810_113622830	0.029506	UCCAGUU	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr17_+_1733276_1733321	0.0293869	UCCAGUU	ENST00000254719.5|RPA1|ENSG00000132383.7|replication protein A1, 70kDa
hg19_v2_chr17_+_18761417_18761496	0.0290892	UCCAGUU	ENST00000419284.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000268835.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000412418.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000575228.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000575102.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000536323.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v2_chr12_+_69633317_69633366	0.0282943	UCCAGUU	ENST00000435070.2|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr12_+_111843749_111843763	0.0282535	UCCAGUU	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr14_+_55738021_55738176	0.0280621	UCCAGUU	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr5_+_153825510_153825529	0.0278578	UCCAGUU	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr11_+_107879459_107879702	0.0278411	UCCAGUU	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr4_+_166794383_166794500	0.0277705	UCCAGUU	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr9_+_115249100_115249358	0.0275196	UCCAGUU	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr15_+_45879321_45879438	0.027025	UCCAGUU	ENST00000220531.3|BLOC1S6|ENSG00000104164.6|biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 	ENST00000567461.1|BLOC1S6|ENSG00000104164.6|biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
hg19_v2_chr21_+_45432174_45432254	0.0270161	UCCAGUU	ENST00000380221.3|TRAPPC10|ENSG00000160218.8|trafficking protein particle complex 10 	ENST00000291574.4|TRAPPC10|ENSG00000160218.8|trafficking protein particle complex 10
hg19_v2_chr14_+_19553365_19553365	0.0268478	UCCAGUU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr16_-_56485257_56485287	0.0267916	UCCAGUU	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr4_-_8160510_8160582	0.0260625	UCCAGUU	ENST00000407564.3|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000361737.5|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000296372.8|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000545242.1|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000546334.1|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000318888.4|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2 	ENST00000428004.2|ABLIM2|ENSG00000163995.14|actin binding LIM protein family, member 2
hg19_v2_chr20_-_48770174_48770243	0.0254643	UCCAGUU	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr2_-_37384175_37384208	0.0253793	UCCAGUU	ENST00000411537.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000233057.4|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000395127.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000390013.3|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2
hg19_v2_chr11_-_104034827_104034850	0.0250607	UCCAGUU	ENST00000393158.2|PDGFD|ENSG00000170962.8|platelet derived growth factor D
hg19_v2_chr3_+_121311966_121311966	0.0243264	UCCAGUU	ENST00000338040.4|FBXO40|ENSG00000163833.6|F-box protein 40
hg19_v2_chr1_+_78956651_78956757	0.0240045	UCCAGUU	ENST00000370757.3|PTGFR|ENSG00000122420.5|prostaglandin F receptor (FP) 	ENST00000370756.3|PTGFR|ENSG00000122420.5|prostaglandin F receptor (FP)
hg19_v2_chr3_-_15901278_15901354	0.0232368	UCCAGUU	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr5_+_140560980_140560980	0.0231862	UCCAGUU	ENST00000361016.2|PCDHB16|ENSG00000196963.2|protocadherin beta 16
hg19_v2_chr17_+_67410832_67410871	0.0230457	UCCAGUU	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr11_-_94964354_94964374	0.0226919	UCCAGUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr3_+_98451275_98451361	0.0224641	UCCAGUU	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr1_-_115323245_115323324	0.0220825	UCCAGUU	ENST00000060969.5|SIKE1|ENSG00000052723.7|suppressor of IKBKE 1 	ENST00000369528.5|SIKE1|ENSG00000052723.7|suppressor of IKBKE 1
hg19_v2_chr4_+_144106080_144106144	0.0209928	UCCAGUU	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chrX_+_48432892_48432926	0.0202923	UCCAGUU	ENST00000376759.3|RBM3|ENSG00000102317.13|RNA binding motif (RNP1, RRM) protein 3 	ENST00000430348.2|RBM3|ENSG00000102317.13|RNA binding motif (RNP1, RRM) protein 3
hg19_v2_chr2_-_111334678_111334762	0.0198676	UCCAGUU	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr4_+_170541660_170541677	0.0195765	UCCAGUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr7_-_5570229_5570340	0.0194735	UCCAGUU	ENST00000331789.5|ACTB|ENSG00000075624.9|actin, beta
hg19_v2_chr18_-_21977748_21977823	0.0187764	UCCAGUU	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr13_+_50202435_50202435	0.0187362	UCCAGUU	ENST00000282026.1|ARL11|ENSG00000152213.3|ADP-ribosylation factor-like 11
hg19_v2_chr14_-_35182994_35183034	0.0184478	UCCAGUU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr15_+_72766651_72766680	0.0183888	UCCAGUU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr12_+_49761224_49761259	0.0183394	UCCAGUU	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chrX_+_44732757_44732860	0.0181453	UCCAGUU	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr10_-_118032697_118032796	0.0181204	UCCAGUU	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr16_-_69419871_69419927	0.0177821	UCCAGUU	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr3_+_47324424_47324447	0.0173691	UCCAGUU	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr15_-_34502278_34502318	0.0172815	UCCAGUU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr10_+_20105157_20105184	0.0172418	UCCAGUU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr12_+_93771659_93771710	0.0166973	UCCAGUU	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr18_-_30050395_30050495	0.0162638	UCCAGUU	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr4_+_144434584_144434709	0.016104	UCCAGUU	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr7_+_117120017_117120087	0.0160941	UCCAGUU	ENST00000003084.6|CFTR|ENSG00000001626.10|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 	ENST00000454343.1|CFTR|ENSG00000001626.10|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg19_v2_chr20_+_44746939_44746962	0.0159904	UCCAGUU	ENST00000372276.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr17_-_60142609_60142657	0.0144411	UCCAGUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr12_-_95044309_95044390	0.014115	UCCAGUU	ENST00000261226.4|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr14_-_78083112_78083140	0.0139079	UCCAGUU	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr6_+_56911336_56911347	0.0137759	UCCAGUU	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr16_+_84853580_84853611	0.0135704	UCCAGUU	ENST00000262424.5|CRISPLD2|ENSG00000103196.7|cysteine-rich secretory protein LCCL domain containing 2 	ENST00000566151.1|CRISPLD2|ENSG00000103196.7|cysteine-rich secretory protein LCCL domain containing 2 	ENST00000567845.1|CRISPLD2|ENSG00000103196.7|cysteine-rich secretory protein LCCL domain containing 2 	ENST00000564567.1|CRISPLD2|ENSG00000103196.7|cysteine-rich secretory protein LCCL domain containing 2 	ENST00000569090.1|CRISPLD2|ENSG00000103196.7|cysteine-rich secretory protein LCCL domain containing 2
hg19_v2_chr11_+_117014983_117015017	0.0131003	UCCAGUU	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr14_-_78174344_78174381	0.0127803	UCCAGUU	ENST00000216489.3|ALKBH1|ENSG00000100601.5|alkB, alkylation repair homolog 1 (E. coli)
hg19_v2_chr13_-_30169807_30169839	0.0126657	UCCAGUU	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr1_+_55181490_55181506	0.0126166	UCCAGUU	ENST00000371281.3|TTC4|ENSG00000243725.2|tetratricopeptide repeat domain 4
hg19_v2_chr9_-_107690420_107690518	0.0125879	UCCAGUU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr1_+_52521928_52521948	0.0124282	UCCAGUU	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chr8_-_18871159_18871201	0.0122904	UCCAGUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr6_+_96463840_96463892	0.0120898	UCCAGUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr17_-_5389477_5389537	0.0114064	UCCAGUU	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr16_+_50187556_50187779	0.0113198	UCCAGUU	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chrX_-_11445856_11445943	0.0108182	UCCAGUU	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr5_+_108083517_108083576	0.0107094	UCCAGUU	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr14_-_95786200_95786257	0.0106984	UCCAGUU	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chr2_-_74570520_74570547	0.010683	UCCAGUU	ENST00000394019.2|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000346834.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000359484.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000423644.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000377634.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000436454.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5
hg19_v2_chr16_+_22019404_22019604	0.00958873	UCCAGUU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr2_-_204400113_204400149	0.00958672	UCCAGUU	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr3_-_189838670_189838718	0.00872237	UCCAGUU	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr2_+_120770645_120770669	0.00842515	UCCAGUU	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr4_-_36246060_36246167	0.00836881	UCCAGUU	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr11_+_120207787_120207962	0.00834382	UCCAGUU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr9_+_80912059_80912081	0.0079203	UCCAGUU	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr2_+_36582857_36583069	0.00776166	UCCAGUU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr13_-_103053946_103054124	0.00733752	UCCAGUU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr11_-_9025541_9025596	0.00689458	UCCAGUU	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr3_+_112709804_112709850	0.00661017	UCCAGUU	ENST00000383677.3|GTPBP8|ENSG00000163607.10|GTP-binding protein 8 (putative)
hg19_v2_chr12_+_96588143_96588185	0.00624395	UCCAGUU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr1_+_206557366_206557368	0.00589223	UCCAGUU	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr12_+_70760056_70760085	0.00587721	UCCAGUU	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr20_+_57226284_57226345	0.00587407	UCCAGUU	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr2_-_96781984_96781984	0.00549901	UCCAGUU	ENST00000409345.3|ADRA2B|ENSG00000222040.3|adrenoceptor alpha 2B
hg19_v2_chr6_+_41606176_41606265	0.00532764	UCCAGUU	ENST00000441667.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000230321.6|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000373050.4|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000446650.1|MDFI|ENSG00000112559.9|MyoD family inhibitor 	ENST00000435476.1|MDFI|ENSG00000112559.9|MyoD family inhibitor
hg19_v2_chr3_-_134093395_134093436	0.00524067	UCCAGUU	ENST00000249883.5|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr1_+_28696111_28696130	0.00504455	UCCAGUU	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr10_+_112631547_112631596	0.00462962	UCCAGUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr2_-_216300784_216300895	0.00443294	UCCAGUU	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chrX_+_119495934_119495997	0.00435115	UCCAGUU	ENST00000218008.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000361319.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000539306.1|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg19_v2_chr14_+_53019822_53019873	0.00429695	UCCAGUU	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr11_+_63870660_63870660	0.00412338	UCCAGUU	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr21_+_47878757_47879024	0.00395456	UCCAGUU	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr6_+_80341000_80341025	0.00384971	UCCAGUU	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr6_+_44094627_44094662	0.00378227	UCCAGUU	ENST00000259746.9|TMEM63B|ENSG00000137216.14|transmembrane protein 63B
hg19_v2_chr2_+_39893043_39893118	0.00358388	UCCAGUU	ENST00000281961.2|TMEM178A|ENSG00000152154.6|transmembrane protein 178A
hg19_v2_chr20_-_48729670_48729694	0.0035384	UCCAGUU	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr7_+_96634850_96634874	0.00333742	UCCAGUU	ENST00000518156.2|DLX6|ENSG00000006377.9|distal-less homeobox 6
hg19_v2_chr17_+_57970469_57970600	0.00307191	UCCAGUU	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr8_+_30241995_30242045	0.00214085	UCCAGUU	ENST00000397323.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000339877.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000320203.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000287771.5|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr11_-_35440796_35440916	0.00202653	UCCAGUU	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr13_-_86373536_86373623	0.00192985	UCCAGUU	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr3_+_57994127_57994156	0.00188949	UCCAGUU	ENST00000490882.1|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000295956.4|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000358537.3|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000429972.2|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000348383.5|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000357272.4|FLNB|ENSG00000136068.10|filamin B, beta
hg19_v2_chr1_+_178062855_178062903	0.00130693	UCCAGUU	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr4_+_78078304_78078406	0.0012436	UCCAGUU	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr1_-_170043709_170043874	0.00113469	UCCAGUU	ENST00000367767.1|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3 	ENST00000361580.2|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3 	ENST00000538366.1|KIFAP3|ENSG00000075945.8|kinesin-associated protein 3
hg19_v2_chr14_-_20020272_20020272	0.0010889	UCCAGUU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr2_+_202047596_202047621	0.000538092	UCCAGUU	ENST00000286186.6|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000360132.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr1_+_206680879_206680896	0.000468969	UCCAGUU	ENST00000355294.4|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5 	ENST00000367117.3|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5
hg19_v2_chr19_-_4540486_4540486	0.000221806	UCCAGUU	ENST00000306390.6|LRG1|ENSG00000171236.9|leucine-rich alpha-2-glycoprotein 1
hg19_v2_chr20_-_46415297_46415334	0.000169254	UCCAGUU	ENST00000467815.1|SULF2|ENSG00000196562.10|sulfatase 2 	ENST00000359930.4|SULF2|ENSG00000196562.10|sulfatase 2
