hg19_v2_chr16_+_56965960_56966072	0.296049	UAGUGUU	ENST00000439977.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000344114.4|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000300302.5|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000379792.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr20_+_17550489_17550543	0.245724	UAGUGUU	ENST00000246069.7|DSTN|ENSG00000125868.11|destrin (actin depolymerizing factor)
hg19_v2_chr22_+_33197683_33197698	0.235404	UAGUGUU	ENST00000266085.6|TIMP3|ENSG00000100234.11|TIMP metallopeptidase inhibitor 3
hg19_v2_chr12_-_93323013_93323112	0.234722	UAGUGUU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr2_+_46769798_46769867	0.231609	UAGUGUU	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr4_-_80994210_80994284	0.221831	UAGUGUU	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr9_+_114393634_114393666	0.214286	UAGUGUU	ENST00000556107.1|DNAJC25|ENSG00000059769.15|DnaJ (Hsp40) homolog, subfamily C , member 25 	ENST00000374294.3|DNAJC25-GNG10|ENSG00000244115.1|DNAJC25-GNG10 readthrough
hg19_v2_chr1_-_91487013_91487070	0.210115	UAGUGUU	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr16_+_83841448_83841560	0.20989	UAGUGUU	ENST00000433866.2|HSBP1|ENSG00000230989.2|heat shock factor binding protein 1
hg19_v2_chr12_+_110719032_110719113	0.200496	UAGUGUU	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr3_+_172468472_172468494	0.192754	UAGUGUU	ENST00000232458.5|ECT2|ENSG00000114346.9|epithelial cell transforming sequence 2 oncogene 	ENST00000392692.3|ECT2|ENSG00000114346.9|epithelial cell transforming sequence 2 oncogene
hg19_v2_chr15_+_90931450_90931544	0.191525	UAGUGUU	ENST00000268182.5|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560738.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560418.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1
hg19_v2_chr7_+_36429409_36429420	0.189326	UAGUGUU	ENST00000265748.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr9_-_123964114_123964210	0.186949	UAGUGUU	ENST00000373840.4|RAB14|ENSG00000119396.6|RAB14, member RAS oncogene family
hg19_v2_chr12_+_100967420_100967502	0.180578	UAGUGUU	ENST00000266754.5|GAS2L3|ENSG00000139354.6|growth arrest-specific 2 like 3 	ENST00000547754.1|GAS2L3|ENSG00000139354.6|growth arrest-specific 2 like 3
hg19_v2_chr10_+_88516396_88516426	0.176068	UAGUGUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr3_-_33481835_33481905	0.174994	UAGUGUU	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr3_-_72496035_72496069	0.170743	UAGUGUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr10_+_27793197_27793247	0.169003	UAGUGUU	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr4_-_140098339_140098392	0.165414	UAGUGUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr5_+_79703823_79703845	0.163487	UAGUGUU	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr17_+_1733276_1733321	0.159603	UAGUGUU	ENST00000254719.5|RPA1|ENSG00000132383.7|replication protein A1, 70kDa
hg19_v2_chr1_-_225840747_225840860	0.159592	UAGUGUU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr1_-_29450399_29450447	0.158699	UAGUGUU	ENST00000521452.1|TMEM200B|ENSG00000253304.1|transmembrane protein 200B
hg19_v2_chr12_+_102271129_102271164	0.15834	UAGUGUU	ENST00000258534.8|DRAM1|ENSG00000136048.9|DNA-damage regulated autophagy modulator 1
hg19_v2_chr2_-_39664405_39664453	0.156362	UAGUGUU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr12_+_120875910_120876001	0.154757	UAGUGUU	ENST00000551806.1|AL021546.6|ENSG00000111780.8|Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
hg19_v2_chr3_+_171758344_171758358	0.151359	UAGUGUU	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr7_-_25019760_25019855	0.151195	UAGUGUU	ENST00000352860.1|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000353930.1|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000431825.2|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3 	ENST00000313367.2|OSBPL3|ENSG00000070882.8|oxysterol binding protein-like 3
hg19_v2_chr5_+_179125907_179126038	0.150166	UAGUGUU	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr5_-_39219705_39219721	0.148402	UAGUGUU	ENST00000351578.6|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr1_-_184723942_184724047	0.147823	UAGUGUU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr15_+_66161871_66161893	0.141996	UAGUGUU	ENST00000569896.1|RAB11A|ENSG00000103769.5|RAB11A, member RAS oncogene family
hg19_v2_chr2_+_46926048_46926095	0.141706	UAGUGUU	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr2_-_86948245_86948245	0.140913	UAGUGUU	ENST00000439940.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000604011.1|RNF103-CHMP3|ENSG00000249884.4|RNF103-CHMP3 readthrough
hg19_v2_chr1_+_215740709_215740748	0.138936	UAGUGUU	ENST00000259154.4|KCTD3|ENSG00000136636.8|potassium channel tetramerization domain containing 3
hg19_v2_chr4_+_99916765_99916776	0.138515	UAGUGUU	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr16_-_85722530_85722615	0.137442	UAGUGUU	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr1_+_25071848_25071944	0.137141	UAGUGUU	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chrX_-_20159934_20159976	0.136341	UAGUGUU	ENST00000379593.1|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked 	ENST00000379607.5|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked
hg19_v2_chr19_-_6279932_6280000	0.135541	UAGUGUU	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr15_+_85523671_85523747	0.130962	UAGUGUU	ENST00000310298.4|PDE8A|ENSG00000073417.10|phosphodiesterase 8A 	ENST00000557957.1|PDE8A|ENSG00000073417.10|phosphodiesterase 8A
hg19_v2_chr5_+_72251793_72251825	0.130315	UAGUGUU	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr2_-_39348137_39348212	0.127495	UAGUGUU	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr5_-_76788317_76788421	0.127257	UAGUGUU	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr1_+_182992545_182992630	0.126935	UAGUGUU	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr10_-_32345305_32345376	0.126395	UAGUGUU	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr9_-_127905736_127905815	0.12492	UAGUGUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr19_+_32836499_32836625	0.124503	UAGUGUU	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr1_+_78470530_78470551	0.123497	UAGUGUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr1_-_211752073_211752084	0.122645	UAGUGUU	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr9_-_113800317_113800328	0.122034	UAGUGUU	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr18_+_8609402_8609486	0.121249	UAGUGUU	ENST00000329286.6|RAB12|ENSG00000206418.3|RAB12, member RAS oncogene family
hg19_v2_chr12_-_105630016_105630031	0.119384	UAGUGUU	ENST00000258530.3|APPL2|ENSG00000136044.7|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
hg19_v2_chr1_-_243418344_243418356	0.118252	UAGUGUU	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr15_-_101142362_101142395	0.11708	UAGUGUU	ENST00000559577.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000561308.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560133.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560941.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000559736.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560272.1|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr8_+_356942_356967	0.116283	UAGUGUU	ENST00000276326.5|FBXO25|ENSG00000147364.12|F-box protein 25
hg19_v2_chr9_-_16870704_16870841	0.115346	UAGUGUU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr1_-_95392635_95392834	0.114116	UAGUGUU	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr14_-_92506371_92506418	0.113988	UAGUGUU	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr11_+_34642656_34642682	0.113468	UAGUGUU	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr17_-_62658186_62658231	0.113317	UAGUGUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr5_+_122181184_122181213	0.113228	UAGUGUU	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr2_-_183903133_183903210	0.112177	UAGUGUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr1_+_35734562_35734573	0.110716	UAGUGUU	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr2_+_191513959_191514047	0.110652	UAGUGUU	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr15_+_59063478_59063561	0.108566	UAGUGUU	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr2_-_242212227_242212301	0.107835	UAGUGUU	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr12_+_107168342_107168393	0.107474	UAGUGUU	ENST00000392837.4|RIC8B|ENSG00000111785.14|RIC8 guanine nucleotide exchange factor B
hg19_v2_chr6_+_11094266_11094506	0.106526	UAGUGUU	ENST00000416247.2|SMIM13|ENSG00000224531.4|small integral membrane protein 13
hg19_v2_chr4_+_128703295_128703496	0.105853	UAGUGUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr10_+_76871454_76871467	0.105334	UAGUGUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr10_-_119806085_119806114	0.104627	UAGUGUU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr15_+_38544476_38544574	0.103691	UAGUGUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr17_+_5185552_5185595	0.103092	UAGUGUU	ENST00000262477.6|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000408982.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000575991.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000537505.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000546142.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1
hg19_v2_chr5_-_179780312_179780387	0.102983	UAGUGUU	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chrX_+_146993449_146993498	0.101617	UAGUGUU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr8_-_37756972_37757022	0.101525	UAGUGUU	ENST00000330843.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000522727.1|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I) 	ENST00000287263.4|RAB11FIP1|ENSG00000156675.11|RAB11 family interacting protein 1 (class I)
hg19_v2_chr1_+_7831323_7831414	0.101477	UAGUGUU	ENST00000054666.6|VAMP3|ENSG00000049245.8|vesicle-associated membrane protein 3
hg19_v2_chr2_+_183989083_183989151	0.100314	UAGUGUU	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr3_+_180630090_180630311	0.0986881	UAGUGUU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr2_-_165697920_165697963	0.0941421	UAGUGUU	ENST00000342193.4|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1 	ENST00000375458.2|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1
hg19_v2_chr17_-_45266542_45266683	0.0916977	UAGUGUU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr11_-_77532050_77532066	0.091413	UAGUGUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr14_-_53619816_53620056	0.0913211	UAGUGUU	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr8_+_61429416_61429502	0.0897335	UAGUGUU	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr16_+_22308717_22308764	0.087991	UAGUGUU	ENST00000299853.5|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564209.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000565358.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000418581.2|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564883.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000359210.4|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000563024.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD)
hg19_v2_chr2_-_219433014_219433100	0.0874951	UAGUGUU	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr17_-_21117902_21117937	0.087109	UAGUGUU	ENST00000317635.5|TMEM11|ENSG00000178307.5|transmembrane protein 11
hg19_v2_chrX_-_41782249_41782287	0.0870911	UAGUGUU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr3_-_195808952_195808972	0.0869078	UAGUGUU	ENST00000540528.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000392396.3|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000535031.1|TFRC|ENSG00000072274.8|transferrin receptor 	ENST00000420415.1|TFRC|ENSG00000072274.8|transferrin receptor
hg19_v2_chr2_-_145275228_145275464	0.0851159	UAGUGUU	ENST00000427902.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000409487.3|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000470879.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000435831.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr10_-_104474128_104474209	0.0844523	UAGUGUU	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chrX_-_24045303_24045303	0.0838515	UAGUGUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr2_+_196521458_196521491	0.083756	UAGUGUU	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr18_+_51795774_51795984	0.08256	UAGUGUU	ENST00000579534.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000406285.3|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000577612.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000579434.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000583136.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota
hg19_v2_chr7_-_66460563_66460605	0.0800653	UAGUGUU	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr20_-_23030296_23030378	0.078721	UAGUGUU	ENST00000377103.2|THBD|ENSG00000178726.6|thrombomodulin
hg19_v2_chr12_+_88536067_88536100	0.0780559	UAGUGUU	ENST00000549011.1|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3 	ENST00000266712.6|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3 	ENST00000551088.1|TMTC3|ENSG00000139324.7|transmembrane and tetratricopeptide repeat containing 3
hg19_v2_chr5_+_122110691_122110898	0.0777632	UAGUGUU	ENST00000379516.2|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000505934.1|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000514949.1|SNX2|ENSG00000205302.2|sorting nexin 2
hg19_v2_chr2_+_208394616_208394655	0.0773528	UAGUGUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr9_+_114423615_114423661	0.0765291	UAGUGUU	ENST00000374293.4|GNG10|ENSG00000242616.3|guanine nucleotide binding protein (G protein), gamma 10
hg19_v2_chr1_+_89149905_89149995	0.0757661	UAGUGUU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr13_+_53226963_53227023	0.0757249	UAGUGUU	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr1_-_63153944_63154110	0.0745409	UAGUGUU	ENST00000340370.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000404627.2|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000251157.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7
hg19_v2_chr5_-_156486120_156486134	0.0737231	UAGUGUU	ENST00000522693.1|HAVCR1|ENSG00000113249.8|hepatitis A virus cellular receptor 1
hg19_v2_chr3_+_101292939_101293063	0.0737191	UAGUGUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr18_+_43753974_43754019	0.0733163	UAGUGUU	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr5_-_132299313_132299334	0.072608	UAGUGUU	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr17_-_49198216_49198236	0.0726	UAGUGUU	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr2_-_209119831_209119857	0.0724466	UAGUGUU	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr1_-_244013384_244013430	0.0721965	UAGUGUU	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr8_-_74791051_74791145	0.0716723	UAGUGUU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr14_-_61190754_61190852	0.071384	UAGUGUU	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr5_+_112043186_112043225	0.0706666	UAGUGUU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr6_-_82462425_82462491	0.0706659	UAGUGUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr16_+_69599861_69599887	0.0702053	UAGUGUU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr6_-_111136513_111136525	0.0695748	UAGUGUU	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr10_+_75757863_75757897	0.0693687	UAGUGUU	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr11_-_65667884_65667895	0.0684906	UAGUGUU	ENST00000448083.2|FOSL1|ENSG00000175592.4|FOS-like antigen 1 	ENST00000531493.1|FOSL1|ENSG00000175592.4|FOS-like antigen 1 	ENST00000532401.1|FOSL1|ENSG00000175592.4|FOS-like antigen 1
hg19_v2_chrX_+_23352133_23352229	0.0682922	UAGUGUU	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr9_+_101867359_101867376	0.0673479	UAGUGUU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr6_+_391739_391759	0.0666543	UAGUGUU	ENST00000380956.4|IRF4|ENSG00000137265.10|interferon regulatory factor 4
hg19_v2_chr20_+_37554955_37555067	0.066126	UAGUGUU	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr17_-_1303462_1303672	0.0647152	UAGUGUU	ENST00000573026.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000575977.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000571732.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000264335.8|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
hg19_v2_chr10_+_98592009_98592061	0.0645783	UAGUGUU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr1_+_87170247_87170276	0.0642924	UAGUGUU	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chr6_-_114664180_114664209	0.0632735	UAGUGUU	ENST00000312719.5|HS3ST5|ENSG00000249853.3|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
hg19_v2_chr12_+_11802753_11802834	0.062517	UAGUGUU	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr4_+_26862400_26862416	0.0623568	UAGUGUU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr2_+_106361333_106361520	0.0618679	UAGUGUU	ENST00000233154.4|NCK2|ENSG00000071051.9|NCK adaptor protein 2 	ENST00000451463.2|NCK2|ENSG00000071051.9|NCK adaptor protein 2
hg19_v2_chr1_+_95582881_95582995	0.0605004	UAGUGUU	ENST00000370203.4|TMEM56|ENSG00000152078.5|transmembrane protein 56 	ENST00000456991.1|TMEM56|ENSG00000152078.5|transmembrane protein 56
hg19_v2_chr2_-_61765315_61765422	0.0602568	UAGUGUU	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr7_-_6523755_6523873	0.0599071	UAGUGUU	ENST00000436575.1|DAGLB|ENSG00000164535.10|diacylglycerol lipase, beta 	ENST00000258739.4|KDELR2|ENSG00000136240.5|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
hg19_v2_chr9_+_100395891_100395922	0.0596302	UAGUGUU	ENST00000375147.3|NCBP1|ENSG00000136937.8|nuclear cap binding protein subunit 1, 80kDa
hg19_v2_chr2_+_182756615_182756698	0.0594035	UAGUGUU	ENST00000431877.2|SSFA2|ENSG00000138434.12|sperm specific antigen 2 	ENST00000320370.7|SSFA2|ENSG00000138434.12|sperm specific antigen 2
hg19_v2_chr6_+_25279651_25279727	0.0590417	UAGUGUU	ENST00000329474.6|LRRC16A|ENSG00000079691.15|leucine rich repeat containing 16A
hg19_v2_chr17_-_80606304_80606411	0.0586971	UAGUGUU	ENST00000392325.4|WDR45B|ENSG00000141580.11|WD repeat domain 45B
hg19_v2_chr11_-_62572901_62572964	0.0586039	UAGUGUU	ENST00000439713.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531131.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000530875.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531709.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000294172.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1
hg19_v2_chr7_-_75988321_75988348	0.0576215	UAGUGUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr3_-_49131788_49131812	0.0575922	UAGUGUU	ENST00000395443.2|QRICH1|ENSG00000198218.6|glutamine-rich 1 	ENST00000411682.1|QRICH1|ENSG00000198218.6|glutamine-rich 1
hg19_v2_chr6_-_136610911_136610990	0.0572957	UAGUGUU	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr8_-_125384927_125384952	0.0570563	UAGUGUU	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr15_+_59279851_59279880	0.0566261	UAGUGUU	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr13_-_36705425_36705445	0.0555829	UAGUGUU	ENST00000255448.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000360631.3|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000379892.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr1_-_92949505_92949543	0.0549157	UAGUGUU	ENST00000370332.1|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr1_+_213031570_213031597	0.0546621	UAGUGUU	ENST00000366971.4|FLVCR1|ENSG00000162769.8|feline leukemia virus subgroup C cellular receptor 1
hg19_v2_chr14_+_57735614_57735629	0.0544122	UAGUGUU	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr1_+_200708671_200708744	0.0542537	UAGUGUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr9_-_125590818_125590910	0.0539137	UAGUGUU	ENST00000259467.4|PDCL|ENSG00000136940.9|phosducin-like
hg19_v2_chr8_-_134115118_134115298	0.0536395	UAGUGUU	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr21_-_27542972_27543138	0.053419	UAGUGUU	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr5_+_80597419_80597448	0.0534025	UAGUGUU	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr5_-_114961858_114961876	0.053278	UAGUGUU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr5_-_131826457_131826514	0.0530068	UAGUGUU	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr14_+_103058948_103059005	0.0521251	UAGUGUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr12_+_111843749_111843763	0.0517564	UAGUGUU	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr2_-_113542063_113542167	0.0505651	UAGUGUU	ENST00000263339.3|IL1A|ENSG00000115008.5|interleukin 1, alpha
hg19_v2_chr12_-_25403737_25403881	0.0502445	UAGUGUU	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr4_-_41216619_41216637	0.0484843	UAGUGUU	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr6_-_30712313_30712332	0.0481949	UAGUGUU	ENST00000376377.2|IER3|ENSG00000137331.11|immediate early response 3 	ENST00000259874.5|IER3|ENSG00000137331.11|immediate early response 3
hg19_v2_chr6_+_17600576_17600642	0.0478539	UAGUGUU	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr12_-_46766577_46766650	0.0478237	UAGUGUU	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr11_-_76381781_76381798	0.0477064	UAGUGUU	ENST00000260061.5|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32 	ENST00000404995.1|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32
hg19_v2_chr21_+_40752170_40752303	0.0476562	UAGUGUU	ENST00000333781.5|WRB|ENSG00000182093.10|tryptophan rich basic protein 	ENST00000541890.1|WRB|ENSG00000182093.10|tryptophan rich basic protein
hg19_v2_chr10_+_134351319_134351353	0.0468502	UAGUGUU	ENST00000368594.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa 	ENST00000368593.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa
hg19_v2_chr7_-_98741642_98741713	0.0466401	UAGUGUU	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr2_-_174830430_174830563	0.0466221	UAGUGUU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr3_-_98620500_98620547	0.0464524	UAGUGUU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr3_+_105085734_105085760	0.0447549	UAGUGUU	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr5_-_39074479_39074515	0.0438988	UAGUGUU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr11_-_110167352_110167447	0.0438842	UAGUGUU	ENST00000533991.1|RDX|ENSG00000137710.10|radixin 	ENST00000528498.1|RDX|ENSG00000137710.10|radixin 	ENST00000405097.1|RDX|ENSG00000137710.10|radixin 	ENST00000528900.1|RDX|ENSG00000137710.10|radixin 	ENST00000530301.1|RDX|ENSG00000137710.10|radixin 	ENST00000343115.4|RDX|ENSG00000137710.10|radixin
hg19_v2_chr6_-_74363803_74363878	0.0438102	UAGUGUU	ENST00000355773.5|SLC17A5|ENSG00000119899.11|solute carrier family 17 (acidic sugar transporter), member 5
hg19_v2_chr2_+_148602058_148602185	0.0437078	UAGUGUU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr1_+_178694300_178694346	0.0436367	UAGUGUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr13_+_76123883_76123949	0.0430021	UAGUGUU	ENST00000377595.3|UCHL3|ENSG00000118939.13|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
hg19_v2_chr13_+_100153665_100153688	0.0429617	UAGUGUU	ENST00000376387.4|TM9SF2|ENSG00000125304.8|transmembrane 9 superfamily member 2
hg19_v2_chr1_-_31538517_31538632	0.0428486	UAGUGUU	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr6_-_114292449_114292474	0.0420687	UAGUGUU	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr3_-_123603137_123603203	0.0419102	UAGUGUU	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr1_-_116383738_116383752	0.0410811	UAGUGUU	ENST00000320238.3|NHLH2|ENSG00000177551.5|nescient helix loop helix 2
hg19_v2_chr1_+_91966384_91966454	0.0408225	UAGUGUU	ENST00000430031.2|CDC7|ENSG00000097046.8|cell division cycle 7 	ENST00000234626.6|CDC7|ENSG00000097046.8|cell division cycle 7
hg19_v2_chr19_-_37019562_37019593	0.0387787	UAGUGUU	ENST00000523638.1|ZNF260|ENSG00000254004.2|zinc finger protein 260
hg19_v2_chr12_+_56915713_56915746	0.0385979	UAGUGUU	ENST00000262031.5|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2 	ENST00000552247.2|RBMS2|ENSG00000076067.7|RNA binding motif, single stranded interacting protein 2
hg19_v2_chr1_-_57889687_57889754	0.0370235	UAGUGUU	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr9_-_3525968_3526016	0.0369059	UAGUGUU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chrX_-_20284958_20285039	0.0364636	UAGUGUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chrX_-_73834449_73834481	0.0361553	UAGUGUU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr17_+_7476136_7476160	0.0346946	UAGUGUU	ENST00000582169.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578754.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000578495.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000293831.8|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000380512.5|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000585024.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000583802.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000577269.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000584784.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000582746.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1
hg19_v2_chr2_+_208576355_208576475	0.0346464	UAGUGUU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr7_-_105517021_105517050	0.0345241	UAGUGUU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr6_+_163835669_163835693	0.0341047	UAGUGUU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr9_+_131644388_131644393	0.0340585	UAGUGUU	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr18_+_59854480_59854551	0.0339157	UAGUGUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr10_+_5726764_5726911	0.0338273	UAGUGUU	ENST00000328090.5|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B 	ENST00000496681.1|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B
hg19_v2_chr5_+_78532003_78532017	0.0337408	UAGUGUU	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chrX_+_72783026_72783049	0.032599	UAGUGUU	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr9_+_36190853_36190904	0.0320869	UAGUGUU	ENST00000433436.2|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000538225.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000540080.1|CLTA|ENSG00000122705.12|clathrin, light chain A
hg19_v2_chr1_-_68299130_68299160	0.0318187	UAGUGUU	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr22_+_31608219_31608303	0.0311741	UAGUGUU	ENST00000406516.1|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000444929.2|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000331728.4|LIMK2|ENSG00000182541.13|LIM domain kinase 2
hg19_v2_chr4_-_2243839_2243891	0.0310344	UAGUGUU	ENST00000511885.2|POLN|ENSG00000130997.12|polymerase (DNA directed) nu 	ENST00000506763.1|HAUS3|ENSG00000214367.3|HAUS augmin-like complex, subunit 3 	ENST00000514395.1|HAUS3|ENSG00000214367.3|HAUS augmin-like complex, subunit 3 	ENST00000502440.1|HAUS3|ENSG00000214367.3|HAUS augmin-like complex, subunit 3 	ENST00000243706.4|HAUS3|ENSG00000214367.3|HAUS augmin-like complex, subunit 3 	ENST00000443786.2|HAUS3|ENSG00000214367.3|HAUS augmin-like complex, subunit 3
hg19_v2_chr1_+_201798269_201798339	0.0307482	UAGUGUU	ENST00000361565.4|IPO9|ENSG00000198700.5|importin 9
hg19_v2_chr14_+_35515598_35515637	0.0306261	UAGUGUU	ENST00000280987.4|FAM177A1|ENSG00000151327.8|family with sequence similarity 177, member A1
hg19_v2_chr12_-_77459306_77459365	0.0300827	UAGUGUU	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr15_+_41952591_41952672	0.029928	UAGUGUU	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr8_+_126442563_126442624	0.0292803	UAGUGUU	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr8_-_38239732_38239796	0.028793	UAGUGUU	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr4_+_100737954_100738014	0.0283667	UAGUGUU	ENST00000296414.7|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides 	ENST00000512369.1|DAPP1|ENSG00000070190.8|dual adaptor of phosphotyrosine and 3-phosphoinositides
hg19_v2_chr4_+_38869410_38869437	0.0280167	UAGUGUU	ENST00000358869.2|FAM114A1|ENSG00000197712.7|family with sequence similarity 114, member A1
hg19_v2_chr11_+_68228186_68228281	0.0279679	UAGUGUU	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chrX_+_133507327_133507386	0.0270905	UAGUGUU	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr14_-_27066636_27066701	0.0264948	UAGUGUU	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr10_+_97803151_97803348	0.0264818	UAGUGUU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr1_-_72748417_72748510	0.0258229	UAGUGUU	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr14_-_35182994_35183034	0.0246383	UAGUGUU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr17_+_57697216_57697235	0.0240982	UAGUGUU	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr7_-_14029515_14029642	0.0240847	UAGUGUU	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr3_+_41240925_41240977	0.0231838	UAGUGUU	ENST00000396183.3|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa 	ENST00000349496.5|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa 	ENST00000453024.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa
hg19_v2_chrX_+_44732757_44732860	0.0231324	UAGUGUU	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr1_+_93913713_93913839	0.0231135	UAGUGUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr9_-_99180597_99180614	0.0228855	UAGUGUU	ENST00000375256.4|ZNF367|ENSG00000165244.6|zinc finger protein 367
hg19_v2_chr7_-_123389104_123389161	0.0227889	UAGUGUU	ENST00000223023.4|WASL|ENSG00000106299.7|Wiskott-Aldrich syndrome-like
hg19_v2_chr15_+_91073111_91073191	0.0222534	UAGUGUU	ENST00000420329.2|CRTC3|ENSG00000140577.11|CREB regulated transcription coactivator 3
hg19_v2_chr6_-_116381918_116381977	0.0222352	UAGUGUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr6_-_55740352_55740362	0.0217247	UAGUGUU	ENST00000370830.3|BMP5|ENSG00000112175.6|bone morphogenetic protein 5
hg19_v2_chr6_+_96463840_96463892	0.0213798	UAGUGUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr12_+_69864129_69864222	0.0212653	UAGUGUU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr3_-_15901278_15901354	0.0198714	UAGUGUU	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr22_-_32146106_32146141	0.0197606	UAGUGUU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chrX_+_152599604_152599626	0.0190061	UAGUGUU	ENST00000370251.3|ZNF275|ENSG00000063587.12|zinc finger protein 275 	ENST00000421401.3|ZNF275|ENSG00000063587.12|zinc finger protein 275
hg19_v2_chr8_-_62627057_62627159	0.0188041	UAGUGUU	ENST00000519234.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379449.6|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379454.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518068.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517856.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000356457.5|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr9_+_79074068_79074150	0.018537	UAGUGUU	ENST00000444201.2|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2 	ENST00000376730.4|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v2_chr10_+_69644404_69644427	0.0184254	UAGUGUU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr18_+_42260861_42260882	0.0180471	UAGUGUU	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr12_+_49761224_49761259	0.0177543	UAGUGUU	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr1_-_109506036_109506129	0.0174251	UAGUGUU	ENST00000369976.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000356970.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000357393.4|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000369971.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000415331.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1
hg19_v2_chr1_-_179846928_179846946	0.0173868	UAGUGUU	ENST00000367612.3|TOR1AIP2|ENSG00000169905.8|torsin A interacting protein 2 	ENST00000609928.1|TOR1AIP2|ENSG00000169905.8|torsin A interacting protein 2
hg19_v2_chr6_+_118228657_118228715	0.0168934	UAGUGUU	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr3_+_128968437_128968505	0.0168351	UAGUGUU	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chr13_-_77460525_77460548	0.0162456	UAGUGUU	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr14_+_45431379_45431465	0.0161972	UAGUGUU	ENST00000361577.3|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000361462.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000382233.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B
hg19_v2_chr2_-_206950781_206950947	0.015795	UAGUGUU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr11_+_64851666_64851728	0.0156402	UAGUGUU	ENST00000525509.1|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1 	ENST00000294258.3|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1 	ENST00000526334.1|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1
hg19_v2_chr7_-_17980091_17980136	0.0155939	UAGUGUU	ENST00000409389.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000409604.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000428135.3|SNX13|ENSG00000071189.17|sorting nexin 13
hg19_v2_chr14_-_64010046_64010107	0.0152266	UAGUGUU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr3_+_10857885_10857920	0.0151115	UAGUGUU	ENST00000254488.2|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11 	ENST00000454147.1|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11
hg19_v2_chr5_+_135468516_135468621	0.0142185	UAGUGUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr14_-_93799360_93799438	0.0141624	UAGUGUU	ENST00000334746.5|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000554565.1|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000298896.3|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7
hg19_v2_chr10_-_64576105_64576133	0.0138527	UAGUGUU	ENST00000242480.3|EGR2|ENSG00000122877.9|early growth response 2 	ENST00000411732.1|EGR2|ENSG00000122877.9|early growth response 2
hg19_v2_chr3_-_160283348_160283376	0.0136449	UAGUGUU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr17_-_60142609_60142657	0.0128467	UAGUGUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr5_-_16936340_16936418	0.0124054	UAGUGUU	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr6_+_35182176_35182196	0.0118349	UAGUGUU	ENST00000394681.1|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3 	ENST00000274938.7|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3
hg19_v2_chr5_-_142783175_142783297	0.0117185	UAGUGUU	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr2_-_86790593_86790614	0.0116758	UAGUGUU	ENST00000263856.4|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000409225.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3
hg19_v2_chr8_-_93115445_93115462	0.0114612	UAGUGUU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr15_+_90808919_90808937	0.0114159	UAGUGUU	ENST00000379095.3|NGRN|ENSG00000182768.7|neugrin, neurite outgrowth associated
hg19_v2_chr3_+_47324424_47324447	0.0108158	UAGUGUU	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr3_-_196014520_196014828	0.0104658	UAGUGUU	ENST00000441879.1|PCYT1A|ENSG00000161217.7|phosphate cytidylyltransferase 1, choline, alpha 	ENST00000292823.2|PCYT1A|ENSG00000161217.7|phosphate cytidylyltransferase 1, choline, alpha 	ENST00000411591.1|PCYT1A|ENSG00000161217.7|phosphate cytidylyltransferase 1, choline, alpha 	ENST00000431016.1|PCYT1A|ENSG00000161217.7|phosphate cytidylyltransferase 1, choline, alpha 	ENST00000443555.1|PCYT1A|ENSG00000161217.7|phosphate cytidylyltransferase 1, choline, alpha
hg19_v2_chr12_+_67663056_67663067	0.0103198	UAGUGUU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr1_-_93257951_93257981	0.0100569	UAGUGUU	ENST00000543509.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000370331.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000540033.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5
hg19_v2_chr8_+_67579807_67579887	0.00959781	UAGUGUU	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr14_+_105781048_105781101	0.00860299	UAGUGUU	ENST00000458164.2|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2 	ENST00000447393.1|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2
hg19_v2_chr7_-_23510086_23510118	0.0081145	UAGUGUU	ENST00000258729.3|IGF2BP3|ENSG00000136231.9|insulin-like growth factor 2 mRNA binding protein 3
hg19_v2_chrX_-_11445856_11445943	0.00796741	UAGUGUU	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr4_+_145567173_145567296	0.00793461	UAGUGUU	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr1_+_174769006_174769070	0.00750348	UAGUGUU	ENST00000489615.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr8_-_92053212_92053292	0.00749218	UAGUGUU	ENST00000285419.3|TMEM55A|ENSG00000155099.3|transmembrane protein 55A
hg19_v2_chrX_+_24483338_24483573	0.00711507	UAGUGUU	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
hg19_v2_chr13_+_100258907_100258953	0.0068983	UAGUGUU	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr1_-_38325256_38325292	0.00627675	UAGUGUU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr1_-_155532484_155532605	0.00624023	UAGUGUU	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr2_-_24346218_24346347	0.00589878	UAGUGUU	ENST00000436622.1|PFN4|ENSG00000176732.6|profilin family, member 4 	ENST00000313213.4|PFN4|ENSG00000176732.6|profilin family, member 4
hg19_v2_chr3_-_176914238_176914277	0.00562609	UAGUGUU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr1_+_65613217_65613331	0.0055829	UAGUGUU	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr8_+_28747884_28747938	0.00545339	UAGUGUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr14_+_65381079_65381212	0.00521238	UAGUGUU	ENST00000549115.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000607599.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000548752.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000359118.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000552002.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551947.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551093.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000542227.1|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000447296.2|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000549987.1|CHURC1-FNTB|ENSG00000125954.8|CHURC1-FNTB readthrough
hg19_v2_chr6_+_158957431_158957468	0.0051948	UAGUGUU	ENST00000367090.3|TMEM181|ENSG00000146433.8|transmembrane protein 181
hg19_v2_chr7_+_44788430_44788530	0.00399353	UAGUGUU	ENST00000457123.1|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2 	ENST00000309315.4|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2
hg19_v2_chr16_+_22019404_22019604	0.00381865	UAGUGUU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr3_+_100428268_100428287	0.0033524	UAGUGUU	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr1_+_32479430_32479597	0.00331088	UAGUGUU	ENST00000327300.7|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1 	ENST00000492989.1|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1
hg19_v2_chr21_+_47878757_47879024	0.00304978	UAGUGUU	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr17_+_26662730_26662844	0.00261512	UAGUGUU	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr14_+_53019822_53019873	0.00250582	UAGUGUU	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr4_-_149365827_149365870	0.00242835	UAGUGUU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr14_+_45605127_45605155	0.00232805	UAGUGUU	ENST00000556036.1|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M 	ENST00000267430.5|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr5_+_179159813_179159851	0.00228667	UAGUGUU	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr9_+_133454943_133455020	0.00202994	UAGUGUU	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr20_-_3996036_3996153	0.00187673	UAGUGUU	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr6_+_44094627_44094662	0.000878558	UAGUGUU	ENST00000259746.9|TMEM63B|ENSG00000137216.14|transmembrane protein 63B
