hg19_v2_chr10_-_112064665_112064737	0.0770756	UAAUGCU	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr18_-_45456930_45456970	0.0614042	UAAUGCU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr14_-_30396948_30396998	0.0495301	UAAUGCU	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr1_-_91487013_91487070	0.0482454	UAAUGCU	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr15_+_49715293_49715448	0.0454764	UAAUGCU	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr2_+_48010221_48010307	0.045383	UAAUGCU	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr9_+_5450503_5450551	0.0449376	UAAUGCU	ENST00000381573.4|CD274|ENSG00000120217.9|CD274 molecule 	ENST00000381577.3|CD274|ENSG00000120217.9|CD274 molecule
hg19_v2_chr10_+_18948311_18948417	0.0426498	UAAUGCU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr11_-_46867780_46867848	0.0408389	UAAUGCU	ENST00000529230.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5 	ENST00000415402.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5 	ENST00000312055.5|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5
hg19_v2_chr14_+_31028329_31028340	0.0391972	UAAUGCU	ENST00000206595.6|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase
hg19_v2_chr2_+_46769798_46769867	0.0381639	UAAUGCU	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr1_-_70671216_70671303	0.0373712	UAAUGCU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr9_+_117350009_117350111	0.0368495	UAAUGCU	ENST00000374050.3|ATP6V1G1|ENSG00000136888.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v2_chr21_+_30671189_30671207	0.035139	UAAUGCU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr14_-_34931458_34931562	0.0341922	UAAUGCU	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr10_-_91403625_91403649	0.0341774	UAAUGCU	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr10_-_119806085_119806114	0.0338109	UAAUGCU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr7_-_151217001_151217019	0.0338058	UAAUGCU	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr19_-_31840438_31840470	0.0332651	UAAUGCU	ENST00000240587.4|TSHZ3|ENSG00000121297.6|teashirt zinc finger homeobox 3
hg19_v2_chr11_-_85780086_85780161	0.0325103	UAAUGCU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr12_+_69004619_69004699	0.0282339	UAAUGCU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr8_-_65711310_65711324	0.0279489	UAAUGCU	ENST00000310193.3|CYP7B1|ENSG00000172817.3|cytochrome P450, family 7, subfamily B, polypeptide 1
hg19_v2_chr15_+_38544476_38544574	0.0279248	UAAUGCU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr8_-_119634141_119634234	0.0268102	UAAUGCU	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr5_-_9546180_9546195	0.0264211	UAAUGCU	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr1_+_215740709_215740748	0.0234738	UAAUGCU	ENST00000259154.4|KCTD3|ENSG00000136636.8|potassium channel tetramerization domain containing 3
hg19_v2_chr12_-_8765446_8765468	0.0234221	UAAUGCU	ENST00000537228.1|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase 	ENST00000229335.6|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase
hg19_v2_chr7_-_139876812_139876860	0.0233201	UAAUGCU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr11_+_34642656_34642682	0.0232939	UAAUGCU	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr8_-_101965146_101965236	0.0229477	UAAUGCU	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr15_+_44719394_44719579	0.0228441	UAAUGCU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr9_+_91003271_91003386	0.0216574	UAAUGCU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr12_+_72233487_72233563	0.0207576	UAAUGCU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr7_+_94139105_94139197	0.0202123	UAAUGCU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr2_-_39348137_39348212	0.0201879	UAAUGCU	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr11_-_18656028_18656040	0.0201819	UAAUGCU	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr1_+_63833261_63833282	0.0199851	UAAUGCU	ENST00000371108.4|ALG6|ENSG00000088035.11|ALG6, alpha-1,3-glucosyltransferase
hg19_v2_chr2_+_208394616_208394655	0.0197688	UAAUGCU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr14_+_103058948_103059005	0.0197627	UAAUGCU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr8_-_81083731_81083813	0.0190689	UAAUGCU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr4_-_10458982_10459007	0.0189505	UAAUGCU	ENST00000326756.3|ZNF518B|ENSG00000178163.3|zinc finger protein 518B
hg19_v2_chr20_-_43589109_43589127	0.0183015	UAAUGCU	ENST00000372813.3|TOMM34|ENSG00000025772.7|translocase of outer mitochondrial membrane 34
hg19_v2_chr5_+_60628074_60628100	0.018291	UAAUGCU	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr18_-_5895954_5895954	0.0179349	UAAUGCU	ENST00000581347.2|TMEM200C|ENSG00000206432.4|transmembrane protein 200C
hg19_v2_chr5_+_14581884_14581960	0.0176787	UAAUGCU	ENST00000274217.3|FAM105A|ENSG00000145569.5|family with sequence similarity 105, member A
hg19_v2_chr5_+_112043186_112043225	0.0175795	UAAUGCU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr2_+_231577532_231577639	0.0174288	UAAUGCU	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr1_+_193091080_193091222	0.0174213	UAAUGCU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chrX_+_117629766_117629872	0.0173232	UAAUGCU	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr8_+_104033277_104033292	0.0172705	UAAUGCU	ENST00000518857.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 	ENST00000395862.3|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
hg19_v2_chr8_+_73921085_73921125	0.0171959	UAAUGCU	ENST00000276603.5|TERF1|ENSG00000147601.9|telomeric repeat binding factor (NIMA-interacting) 1 	ENST00000276602.6|TERF1|ENSG00000147601.9|telomeric repeat binding factor (NIMA-interacting) 1 	ENST00000518874.1|TERF1|ENSG00000147601.9|telomeric repeat binding factor (NIMA-interacting) 1
hg19_v2_chr2_+_70056762_70056847	0.0171512	UAAUGCU	ENST00000282570.3|GMCL1|ENSG00000087338.4|germ cell-less, spermatogenesis associated 1
hg19_v2_chr1_+_60280458_60280546	0.0165334	UAAUGCU	ENST00000455990.1|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1 	ENST00000371208.3|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1
hg19_v2_chr5_+_151151471_151151496	0.0162763	UAAUGCU	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr17_-_40306934_40307035	0.0156501	UAAUGCU	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr2_-_64881018_64881064	0.0153306	UAAUGCU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr19_-_10514184_10514231	0.01533	UAAUGCU	ENST00000589629.1|CDC37|ENSG00000105401.2|cell division cycle 37 	ENST00000222005.2|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr7_-_98030360_98030441	0.015318	UAAUGCU	ENST00000005260.8|BAIAP2L1|ENSG00000006453.9|BAI1-associated protein 2-like 1
hg19_v2_chr17_-_49337392_49337465	0.0151033	UAAUGCU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr2_+_118846008_118846100	0.0149961	UAAUGCU	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr5_-_132073210_132073330	0.0149908	UAAUGCU	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr10_+_180987_181009	0.0149211	UAAUGCU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr8_-_105601134_105601252	0.0144218	UAAUGCU	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr8_-_67525473_67525518	0.0144048	UAAUGCU	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr17_-_13505219_13505299	0.0143204	UAAUGCU	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chrX_-_153979315_153979373	0.0142143	UAAUGCU	ENST00000369575.3|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000369568.4|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3 	ENST00000424127.2|GAB3|ENSG00000160219.7|GRB2-associated binding protein 3
hg19_v2_chr17_+_57642886_57643006	0.0141446	UAAUGCU	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr17_-_62658186_62658231	0.0140496	UAAUGCU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr9_-_16870704_16870841	0.0137525	UAAUGCU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr12_-_123011536_123011547	0.0137492	UAAUGCU	ENST00000331738.7|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000354654.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr2_+_46926048_46926095	0.0137368	UAAUGCU	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr11_-_82782861_82782949	0.0136265	UAAUGCU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr1_+_62208091_62208182	0.0135981	UAAUGCU	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr5_-_56247935_56247959	0.0135697	UAAUGCU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr4_+_77870856_77870919	0.0134815	UAAUGCU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr1_-_157108130_157108173	0.0130791	UAAUGCU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr5_+_67511524_67511628	0.0130681	UAAUGCU	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr21_+_38071430_38071456	0.0130148	UAAUGCU	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr3_-_123603137_123603203	0.0129632	UAAUGCU	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr11_+_47279504_47279563	0.0128689	UAAUGCU	ENST00000441012.2|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000437276.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000436029.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000467728.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000405853.3|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3
hg19_v2_chr14_-_104029013_104029168	0.0128486	UAAUGCU	ENST00000299204.4|BAG5|ENSG00000166170.9|BCL2-associated athanogene 5 	ENST00000557666.1|BAG5|ENSG00000166170.9|BCL2-associated athanogene 5
hg19_v2_chr1_+_112938803_112938860	0.0128307	UAAUGCU	ENST00000271277.6|CTTNBP2NL|ENSG00000143079.10|CTTNBP2 N-terminal like
hg19_v2_chr17_-_65241281_65241326	0.0126307	UAAUGCU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr21_-_34144157_34144175	0.012541	UAAUGCU	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr9_-_132597529_132597575	0.0123898	UAAUGCU	ENST00000372447.3|C9orf78|ENSG00000136819.10|chromosome 9 open reading frame 78
hg19_v2_chr8_-_74884511_74884546	0.0123785	UAAUGCU	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr6_+_149068464_149068559	0.0123742	UAAUGCU	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr2_+_148778570_148778589	0.0123282	UAAUGCU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr3_-_141868357_141868393	0.0120459	UAAUGCU	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr1_+_53527854_53527891	0.0117123	UAAUGCU	ENST00000371500.3|PODN|ENSG00000174348.9|podocan 	ENST00000395871.2|PODN|ENSG00000174348.9|podocan 	ENST00000312553.5|PODN|ENSG00000174348.9|podocan
hg19_v2_chr18_+_158513_158608	0.0115473	UAAUGCU	ENST00000400266.3|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000580410.1|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000383589.2|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000261601.7|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
hg19_v2_chr18_+_67956135_67956144	0.011507	UAAUGCU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr5_-_149492904_149492935	0.0114796	UAAUGCU	ENST00000286301.3|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor 	ENST00000511344.1|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor
hg19_v2_chr5_+_172483347_172483407	0.0114193	UAAUGCU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_-_76788317_76788421	0.0114044	UAAUGCU	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr3_-_190040223_190040264	0.0113965	UAAUGCU	ENST00000295522.3|CLDN1|ENSG00000163347.5|claudin 1
hg19_v2_chr3_+_178866199_178866311	0.0111987	UAAUGCU	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr4_+_123747834_123747863	0.0110144	UAAUGCU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr20_-_39317868_39317884	0.0107839	UAAUGCU	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr1_-_242687676_242687820	0.0106856	UAAUGCU	ENST00000536534.2|PLD5|ENSG00000180287.12|phospholipase D family, member 5
hg19_v2_chr5_-_148930960_148931013	0.0105969	UAAUGCU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr14_-_31495569_31495636	0.0102162	UAAUGCU	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr15_+_59279851_59279880	0.0102152	UAAUGCU	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr5_+_167718604_167718746	0.0102113	UAAUGCU	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chr4_+_95129061_95129198	0.0101058	UAAUGCU	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr12_-_100536608_100536667	0.0100078	UAAUGCU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr10_+_114206956_114207040	0.00985414	UAAUGCU	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr5_+_54603566_54603589	0.00983804	UAAUGCU	ENST00000230640.5|SKIV2L2|ENSG00000039123.11|superkiller viralicidic activity 2-like 2 (S. cerevisiae)
hg19_v2_chr2_-_64371546_64371588	0.00965209	UAAUGCU	ENST00000358912.4|PELI1|ENSG00000197329.7|pellino E3 ubiquitin protein ligase 1
hg19_v2_chr3_+_180630090_180630311	0.0095521	UAAUGCU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr14_-_21905395_21905419	0.00948638	UAAUGCU	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr2_-_169887827_169887839	0.00944578	UAAUGCU	ENST00000263817.6|ABCB11|ENSG00000073734.8|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v2_chr5_-_16936340_16936418	0.00942816	UAAUGCU	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr5_-_107717058_107717155	0.00927488	UAAUGCU	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr7_+_106809406_106809460	0.00920455	UAAUGCU	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chrX_-_73834449_73834481	0.00912314	UAAUGCU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr4_+_7045042_7045262	0.00883999	UAAUGCU	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr13_+_20532807_20532841	0.00854664	UAAUGCU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr20_+_37554955_37555067	0.00825234	UAAUGCU	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr1_-_52456352_52456436	0.00823923	UAAUGCU	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr19_+_34663397_34663473	0.00822184	UAAUGCU	ENST00000540746.2|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000544216.3|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000433627.5|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v2_chr14_+_103243813_103243955	0.00815369	UAAUGCU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr11_-_128392085_128392232	0.00811792	UAAUGCU	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr9_+_82186872_82186898	0.00786126	UAAUGCU	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr6_-_80247105_80247133	0.00784935	UAAUGCU	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr10_+_114709999_114710031	0.00784813	UAAUGCU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr12_+_104458235_104458344	0.00761543	UAAUGCU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr7_-_82073109_82073150	0.00751901	UAAUGCU	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr22_-_41258074_41258130	0.00749295	UAAUGCU	ENST00000307221.4|DNAJB7|ENSG00000172404.4|DnaJ (Hsp40) homolog, subfamily B, member 7
hg19_v2_chr5_-_39074479_39074515	0.00742543	UAAUGCU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr20_+_60813535_60813592	0.00739543	UAAUGCU	ENST00000358053.2|OSBPL2|ENSG00000130703.11|oxysterol binding protein-like 2 	ENST00000313733.3|OSBPL2|ENSG00000130703.11|oxysterol binding protein-like 2 	ENST00000439951.2|OSBPL2|ENSG00000130703.11|oxysterol binding protein-like 2
hg19_v2_chr3_+_141106643_141106681	0.00735853	UAAUGCU	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr18_+_67068228_67068291	0.00729392	UAAUGCU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr17_-_1303462_1303672	0.00717611	UAAUGCU	ENST00000573026.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000575977.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000571732.1|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 	ENST00000264335.8|YWHAE|ENSG00000108953.12|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
hg19_v2_chr4_+_38665810_38665827	0.00714482	UAAUGCU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr6_-_146135880_146135952	0.00713021	UAAUGCU	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr4_-_76598296_76598318	0.00709411	UAAUGCU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr14_+_75536280_75536321	0.00707933	UAAUGCU	ENST00000238686.8|ZC2HC1C|ENSG00000119703.12|zinc finger, C2HC-type containing 1C
hg19_v2_chr17_+_4613918_4614000	0.00701123	UAAUGCU	ENST00000574954.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000346341.2|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000572457.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000381488.6|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000412477.3|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000571428.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000575877.1|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr10_+_12171721_12171732	0.00691985	UAAUGCU	ENST00000379020.4|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae) 	ENST00000379017.3|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae)
hg19_v2_chr3_-_119813264_119813272	0.0069034	UAAUGCU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr6_+_71122974_71123011	0.00673612	UAAUGCU	ENST00000418814.2|FAM135A|ENSG00000082269.12|family with sequence similarity 135, member A
hg19_v2_chr1_-_22109682_22109719	0.00626398	UAAUGCU	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr3_+_32147997_32148009	0.00611855	UAAUGCU	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr2_-_24149977_24150007	0.00598654	UAAUGCU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr1_+_89149905_89149995	0.00596743	UAAUGCU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr16_+_53088885_53088961	0.00586622	UAAUGCU	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr16_+_69599861_69599887	0.00586307	UAAUGCU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr15_+_77223960_77223994	0.00577505	UAAUGCU	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr15_-_82338460_82338496	0.00572026	UAAUGCU	ENST00000558133.1|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B 	ENST00000329713.4|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B
hg19_v2_chr10_+_98592009_98592061	0.00562776	UAAUGCU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chrX_-_20284958_20285039	0.0055078	UAAUGCU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr15_+_50716576_50716624	0.00547134	UAAUGCU	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr10_-_131762105_131762105	0.00520834	UAAUGCU	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr2_+_173600671_173600709	0.00516716	UAAUGCU	ENST00000409036.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr13_-_29069232_29069272	0.00510484	UAAUGCU	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr5_-_95297678_95297775	0.00496172	UAAUGCU	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr5_+_135468516_135468621	0.00463864	UAAUGCU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr2_+_158733088_158733214	0.00461684	UAAUGCU	ENST00000605860.1|UPP2|ENSG00000007001.8|uridine phosphorylase 2
hg19_v2_chr4_-_140477928_140477990	0.00454052	UAAUGCU	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr3_-_122233723_122233797	0.00453107	UAAUGCU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr8_-_134115118_134115298	0.00446912	UAAUGCU	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chrX_-_80065146_80065250	0.00443213	UAAUGCU	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr3_-_142166904_142166916	0.00436402	UAAUGCU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr22_-_38380543_38380569	0.00433941	UAAUGCU	ENST00000396884.2|SOX10|ENSG00000100146.12|SRY (sex determining region Y)-box 10
hg19_v2_chr2_-_174830430_174830563	0.00431627	UAAUGCU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chrX_-_13956737_13956808	0.004298	UAAUGCU	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr11_-_94964354_94964374	0.00429756	UAAUGCU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr2_+_178077477_178077525	0.00377656	UAAUGCU	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr5_+_110559784_110559803	0.00373403	UAAUGCU	ENST00000282356.4|CAMK4|ENSG00000152495.6|calcium/calmodulin-dependent protein kinase IV
hg19_v2_chr12_-_67072714_67072925	0.003638	UAAUGCU	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr12_+_96588143_96588185	0.00363422	UAAUGCU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr3_-_160283348_160283376	0.00350674	UAAUGCU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr17_-_48474828_48474914	0.00339449	UAAUGCU	ENST00000576448.1|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59 	ENST00000225972.7|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59
hg19_v2_chrX_-_19988382_19988416	0.00338983	UAAUGCU	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr12_+_862089_862343	0.00338392	UAAUGCU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr10_-_13390270_13390316	0.00311222	UAAUGCU	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr2_+_148602058_148602185	0.00291487	UAAUGCU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr22_-_50217981_50217981	0.00280995	UAAUGCU	ENST00000457780.2|BRD1|ENSG00000100425.14|bromodomain containing 1
hg19_v2_chr18_+_59854480_59854551	0.00274129	UAAUGCU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr17_-_62207485_62207511	0.00268408	UAAUGCU	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chr7_+_155250824_155250824	0.0025303	UAAUGCU	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chrX_+_16964794_16964861	0.00247969	UAAUGCU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr8_+_67579807_67579887	0.00242638	UAAUGCU	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr8_-_57123815_57123867	0.00241907	UAAUGCU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr1_-_235292250_235292261	0.00241153	UAAUGCU	ENST00000366607.4|TOMM20|ENSG00000173726.6|translocase of outer mitochondrial membrane 20 homolog (yeast)
hg19_v2_chr5_+_153825510_153825529	0.00236141	UAAUGCU	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr9_+_119449576_119449638	0.0023034	UAAUGCU	ENST00000450136.1|TRIM32|ENSG00000119401.10|tripartite motif containing 32 	ENST00000373983.2|TRIM32|ENSG00000119401.10|tripartite motif containing 32 	ENST00000411410.1|TRIM32|ENSG00000119401.10|tripartite motif containing 32
hg19_v2_chr9_-_72374848_72374894	0.00224686	UAAUGCU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr1_+_33283043_33283198	0.00222619	UAAUGCU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr7_-_14029515_14029642	0.00210662	UAAUGCU	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr4_-_16228120_16228164	0.00202692	UAAUGCU	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr17_-_71228357_71228533	0.00201589	UAAUGCU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr1_-_10003372_10003465	0.00197467	UAAUGCU	ENST00000377223.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000541052.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000377213.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing
hg19_v2_chr2_-_69870835_69870853	0.00189919	UAAUGCU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr16_-_48644061_48644141	0.00189471	UAAUGCU	ENST00000262384.3|N4BP1|ENSG00000102921.3|NEDD4 binding protein 1
hg19_v2_chr3_-_155572164_155572236	0.00187335	UAAUGCU	ENST00000392845.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1 	ENST00000359479.3|SLC33A1|ENSG00000169359.9|solute carrier family 33 (acetyl-CoA transporter), member 1
hg19_v2_chr5_+_141488070_141488094	0.00183825	UAAUGCU	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr14_+_94492674_94492733	0.00179765	UAAUGCU	ENST00000203664.5|OTUB2|ENSG00000089723.5|OTU domain, ubiquitin aldehyde binding 2 	ENST00000553723.1|OTUB2|ENSG00000089723.5|OTU domain, ubiquitin aldehyde binding 2
hg19_v2_chr12_+_93771659_93771710	0.001736	UAAUGCU	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr4_-_149365827_149365870	0.0017055	UAAUGCU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr10_+_69644404_69644427	0.00162132	UAAUGCU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr4_-_88141755_88141791	0.0015867	UAAUGCU	ENST00000273963.5|KLHL8|ENSG00000145332.9|kelch-like family member 8
hg19_v2_chr12_-_111021110_111021142	0.00157824	UAAUGCU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr10_-_105615164_105615323	0.00144081	UAAUGCU	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr1_+_2160134_2160134	0.00138162	UAAUGCU	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr20_+_32077880_32077951	0.00123339	UAAUGCU	ENST00000342704.6|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000375279.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr19_-_57352064_57352102	0.0012329	UAAUGCU	ENST00000326441.9|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593695.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000599577.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593711.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000594389.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000423103.2|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000598410.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000391708.3|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000221722.5|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000599935.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2
hg19_v2_chr2_-_204400113_204400149	0.00119852	UAAUGCU	ENST00000319170.5|RAPH1|ENSG00000173166.13|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg19_v2_chr12_-_51477333_51477426	0.00111638	UAAUGCU	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr13_+_22245522_22245676	0.00100982	UAAUGCU	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr11_+_57308979_57308979	0.000828361	UAAUGCU	ENST00000457912.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr16_+_5008290_5008355	0.000783944	UAAUGCU	ENST00000251170.7|SEC14L5|ENSG00000103184.7|SEC14-like 5 (S. cerevisiae)
hg19_v2_chr7_-_3083573_3083584	0.000775032	UAAUGCU	ENST00000396946.4|CARD11|ENSG00000198286.5|caspase recruitment domain family, member 11
hg19_v2_chr7_-_32931387_32931509	0.000671892	UAAUGCU	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr4_-_39979576_39979588	0.00063099	UAAUGCU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr6_+_36853607_36853640	0.000498644	UAAUGCU	ENST00000480824.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000355190.3|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000373685.1|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89
hg19_v2_chr11_-_58980342_58980431	0.000418526	UAAUGCU	ENST00000361050.3|MPEG1|ENSG00000197629.5|macrophage expressed 1
hg19_v2_chr4_+_169418195_169418217	0.000415069	UAAUGCU	ENST00000261509.6|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein 	ENST00000335742.7|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr20_+_11871371_11871428	0.000339189	UAAUGCU	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr4_-_69083720_69083798	0.000311529	UAAUGCU	ENST00000432593.3|TMPRSS11BNL|ENSG00000226894.3|TMPRSS11B N-terminal like
hg19_v2_chr10_-_98346801_98346812	0.000288431	UAAUGCU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr3_-_107809816_107809885	0.000174009	UAAUGCU	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
