hg19_v2_chr19_+_507299_507299	2.7672	SMAD4	ENST00000359315.5|TPGS1|ENSG00000141933.8|tubulin polyglutamylase complex subunit 1
hg19_v2_chr1_-_32827682_32827844	1.95579	SMAD4	ENST00000432622.1|FAM229A|ENSG00000225828.1|family with sequence similarity 229, member A
hg19_v2_chr22_+_30752606_30752627	1.79581	SMAD4	ENST00000399824.2|CCDC157|ENSG00000187860.6|coiled-coil domain containing 157 	ENST00000405659.1|CCDC157|ENSG00000187860.6|coiled-coil domain containing 157 	ENST00000338306.3|CCDC157|ENSG00000187860.6|coiled-coil domain containing 157
hg19_v2_chr2_+_233734994_233735010	1.75734	SMAD4	ENST00000331342.2|C2orf82|ENSG00000182600.5|chromosome 2 open reading frame 82
hg19_v2_chr19_-_47734448_47734466	1.56008	SMAD4	ENST00000439096.2|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr16_+_3070356_3070383	1.46425	SMAD4	ENST00000341627.5|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575124.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575836.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr19_+_51152702_51152702	1.3599	SMAD4	ENST00000425202.1|C19orf81|ENSG00000235034.2|chromosome 19 open reading frame 81
hg19_v2_chr12_-_49365501_49365546	1.35587	SMAD4	ENST00000403957.1|WNT10B|ENSG00000169884.9|wingless-type MMTV integration site family, member 10B 	ENST00000301061.4|WNT10B|ENSG00000169884.9|wingless-type MMTV integration site family, member 10B
hg19_v2_chr6_-_26189304_26189346	1.34476	SMAD4	ENST00000340756.2|HIST1H4D|ENSG00000188987.2|histone cluster 1, H4d
hg19_v2_chr17_-_7297833_7297889	1.21133	SMAD4	ENST00000571802.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000576201.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000573213.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000324822.11|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr11_+_66624527_66624592	1.19107	SMAD4	ENST00000393952.3|LRFN4|ENSG00000173621.8|leucine rich repeat and fibronectin type III domain containing 4
hg19_v2_chr11_-_67120974_67121041	1.183	SMAD4	ENST00000539074.1|POLD4|ENSG00000175482.4|polymerase (DNA-directed), delta 4, accessory subunit 	ENST00000312419.3|POLD4|ENSG00000175482.4|polymerase (DNA-directed), delta 4, accessory subunit
hg19_v2_chr1_+_180165672_180165817	1.1705	SMAD4	ENST00000443059.1|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr19_-_56092187_56092248	1.16124	SMAD4	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr7_-_150777874_150777918	1.15569	SMAD4	ENST00000540185.1|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase
hg19_v2_chr16_+_29840929_29840977	1.1404	SMAD4	ENST00000566252.1|MVP|ENSG00000013364.14|major vault protein
hg19_v2_chr2_-_228028829_228028858	1.13489	SMAD4	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr19_-_58864848_58864868	1.12962	SMAD4	ENST00000263100.3|A1BG|ENSG00000121410.7|alpha-1-B glycoprotein
hg19_v2_chr6_+_27791862_27791884	1.12874	SMAD4	ENST00000355057.1|HIST1H4J|ENSG00000197238.3|histone cluster 1, H4j
hg19_v2_chr10_+_104180580_104180605	1.12086	SMAD4	ENST00000425536.1|FBXL15|ENSG00000107872.8|F-box and leucine-rich repeat protein 15
hg19_v2_chr3_-_120400960_120401030	1.07036	SMAD4	ENST00000476082.2|HGD|ENSG00000113924.7|homogentisate 1,2-dioxygenase
hg19_v2_chr2_+_232575168_232575233	1.0689	SMAD4	ENST00000440384.1|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr8_+_144679984_144680074	1.06223	SMAD4	ENST00000504548.2|TIGD5|ENSG00000179886.4|tigger transposable element derived 5 	ENST00000321385.3|TIGD5|ENSG00000179886.4|tigger transposable element derived 5
hg19_v2_chr3_-_48632593_48632770	1.01066	SMAD4	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr8_-_144623595_144623646	1.00802	SMAD4	ENST00000262577.5|ZC3H3|ENSG00000014164.6|zinc finger CCCH-type containing 3
hg19_v2_chr2_-_74730430_74730451	1.00313	SMAD4	ENST00000460508.3|LBX2|ENSG00000179528.11|ladybird homeobox 2
hg19_v2_chr12_+_58166726_58166836	0.993719	SMAD4	ENST00000546504.1|RP11-571M6.15|ENSG00000257921.1|Uncharacterized protein
hg19_v2_chr1_-_44482979_44483009	0.974515	SMAD4	ENST00000360584.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000357730.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000528803.1|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr19_+_46171464_46171515	0.963745	SMAD4	ENST00000590918.1|GIPR|ENSG00000010310.4|gastric inhibitory polypeptide receptor 	ENST00000263281.3|GIPR|ENSG00000010310.4|gastric inhibitory polypeptide receptor 	ENST00000304207.8|GIPR|ENSG00000010310.4|gastric inhibitory polypeptide receptor
hg19_v2_chr9_-_130700080_130700160	0.960975	SMAD4	ENST00000373110.4|DPM2|ENSG00000136908.13|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit
hg19_v2_chr8_+_22409193_22409215	0.952521	SMAD4	ENST00000240123.7|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chrX_-_30327495_30327509	0.92786	SMAD4	ENST00000453287.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr11_+_64879317_64879470	0.917769	SMAD4	ENST00000526809.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000279263.7|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000524986.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000534371.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000540748.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000525385.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000345348.5|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000531321.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000529414.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000526085.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2 	ENST00000530750.1|TM7SF2|ENSG00000149809.10|transmembrane 7 superfamily member 2
hg19_v2_chr17_-_61777459_61777502	0.916262	SMAD4	ENST00000578993.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000583211.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000259006.3|LIMD2|ENSG00000136490.4|LIM domain containing 2
hg19_v2_chr19_+_11466062_11466159	0.903729	SMAD4	ENST00000251473.5|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000591329.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000586380.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2
hg19_v2_chr2_+_130939827_130939886	0.893821	SMAD4	ENST00000409255.1|MZT2B|ENSG00000152082.9|mitotic spindle organizing protein 2B 	ENST00000455239.1|MZT2B|ENSG00000152082.9|mitotic spindle organizing protein 2B
hg19_v2_chr19_-_44031341_44031374	0.893387	SMAD4	ENST00000600651.1|ETHE1|ENSG00000105755.3|ethylmalonic encephalopathy 1
hg19_v2_chr6_-_26027480_26027522	0.884526	SMAD4	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr17_-_73874654_73874675	0.872222	SMAD4	ENST00000254816.2|TRIM47|ENSG00000132481.2|tripartite motif containing 47
hg19_v2_chr8_+_82066514_82066565	0.871552	SMAD4	ENST00000519412.1|RP11-1149M10.2|ENSG00000253214.1|RP11-1149M10.2	ENST00000521953.1|RP11-1149M10.2|ENSG00000253214.1|RP11-1149M10.2
hg19_v2_chr16_-_31076273_31076290	0.86852	SMAD4	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr9_-_14322319_14322340	0.860165	SMAD4	ENST00000606230.1|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr17_-_8027402_8027432	0.851751	SMAD4	ENST00000541682.2|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000317814.4|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000577735.1|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7
hg19_v2_chr6_-_107230334_107230374	0.847602	SMAD4	ENST00000607090.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1
hg19_v2_chr22_-_37823468_37823528	0.844239	SMAD4	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr1_-_151345159_151345209	0.842382	SMAD4	ENST00000458566.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000447402.3|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000426705.2|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000435071.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000368868.5|SELENBP1|ENSG00000143416.16|selenium binding protein 1
hg19_v2_chr19_-_47287990_47288086	0.827304	SMAD4	ENST00000593713.1|SLC1A5|ENSG00000105281.8|solute carrier family 1 (neutral amino acid transporter), member 5 	ENST00000598022.1|SLC1A5|ENSG00000105281.8|solute carrier family 1 (neutral amino acid transporter), member 5 	ENST00000434726.2|SLC1A5|ENSG00000105281.8|solute carrier family 1 (neutral amino acid transporter), member 5
hg19_v2_chr19_+_49127600_49127685	0.822466	SMAD4	ENST00000601704.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000593308.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr16_-_68002456_68002597	0.818251	SMAD4	ENST00000576616.1|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4 	ENST00000572037.1|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4 	ENST00000338335.3|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4 	ENST00000422611.2|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4 	ENST00000316341.3|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4
hg19_v2_chr8_-_144890847_144890847	0.805329	SMAD4	ENST00000531942.1|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein
hg19_v2_chr19_-_44031375_44031414	0.797258	SMAD4	ENST00000292147.2|ETHE1|ENSG00000105755.3|ethylmalonic encephalopathy 1
hg19_v2_chr7_-_55620433_55620545	0.793566	SMAD4	ENST00000418904.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr6_-_43197189_43197228	0.780654	SMAD4	ENST00000509253.1|DNPH1|ENSG00000112667.8|2'-deoxynucleoside 5'-phosphate N-hydrolase 1 	ENST00000393987.2|DNPH1|ENSG00000112667.8|2'-deoxynucleoside 5'-phosphate N-hydrolase 1 	ENST00000230431.6|DNPH1|ENSG00000112667.8|2'-deoxynucleoside 5'-phosphate N-hydrolase 1
hg19_v2_chr14_-_23288930_23289020	0.774157	SMAD4	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr3_+_50316458_50316496	0.771377	SMAD4	ENST00000316436.3|LSMEM2|ENSG00000179564.3|leucine-rich single-pass membrane protein 2
hg19_v2_chr16_-_31076332_31076409	0.770974	SMAD4	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr11_+_66742742_66742753	0.751882	SMAD4	ENST00000308963.4|C11orf86|ENSG00000173237.4|chromosome 11 open reading frame 86
hg19_v2_chr17_-_7297519_7297593	0.749069	SMAD4	ENST00000576362.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000571078.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr9_+_139247484_139247509	0.745801	SMAD4	ENST00000429455.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chr19_-_51014588_51014633	0.743065	SMAD4	ENST00000598418.1|JOSD2|ENSG00000161677.7|Josephin domain containing 2
hg19_v2_chr17_-_7307358_7307456	0.736255	SMAD4	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr7_-_100881109_100881227	0.731079	SMAD4	ENST00000308344.5|CLDN15|ENSG00000106404.9|claudin 15
hg19_v2_chr1_+_24117627_24117659	0.724667	SMAD4	ENST00000400061.1|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr20_-_36794902_36794917	0.718521	SMAD4	ENST00000373403.3|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr3_-_195619579_195619655	0.715783	SMAD4	ENST00000428187.1|TNK2|ENSG00000061938.12|tyrosine kinase, non-receptor, 2
hg19_v2_chr6_+_30850862_30851037	0.715612	SMAD4	ENST00000504651.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000512694.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000515233.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr5_-_132166303_132166363	0.713149	SMAD4	ENST00000440118.1|SHROOM1|ENSG00000164403.10|shroom family member 1
hg19_v2_chr3_+_183967409_183967497	0.705365	SMAD4	ENST00000324557.4|ECE2|ENSG00000145194.13|endothelin converting enzyme 2 	ENST00000402825.3|ECE2|ENSG00000145194.13|endothelin converting enzyme 2
hg19_v2_chr2_+_30454390_30454409	0.696015	SMAD4	ENST00000395323.3|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000406087.1|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000404397.1|LBH|ENSG00000213626.7|limb bud and heart development
hg19_v2_chr3_+_9958758_9958848	0.689478	SMAD4	ENST00000383812.4|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000438091.1|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000295981.3|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000436503.1|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000403601.3|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000416074.2|IL17RC|ENSG00000163702.14|interleukin 17 receptor C 	ENST00000455057.1|IL17RC|ENSG00000163702.14|interleukin 17 receptor C
hg19_v2_chr16_+_618837_618966	0.688133	SMAD4	ENST00000409439.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q
hg19_v2_chr4_+_926171_926179	0.686779	SMAD4	ENST00000507319.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000264771.4|TMEM175|ENSG00000127419.12|transmembrane protein 175
hg19_v2_chr19_-_42463418_42463542	0.681362	SMAD4	ENST00000600292.1|RABAC1|ENSG00000105404.6|Rab acceptor 1 (prenylated) 	ENST00000601078.1|RABAC1|ENSG00000105404.6|Rab acceptor 1 (prenylated) 	ENST00000601891.1|RABAC1|ENSG00000105404.6|Rab acceptor 1 (prenylated) 	ENST00000222008.6|RABAC1|ENSG00000105404.6|Rab acceptor 1 (prenylated)
hg19_v2_chr17_-_7761256_7761397	0.680558	SMAD4	ENST00000575208.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr2_-_27558270_27558295	0.6776	SMAD4	ENST00000454704.1|GTF3C2|ENSG00000115207.9|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v2_chr11_+_76493294_76493332	0.676132	SMAD4	ENST00000533752.1|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr11_-_72414256_72414429	0.669101	SMAD4	ENST00000427971.2|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr8_+_145726472_145726526	0.666182	SMAD4	ENST00000528430.1|PPP1R16A|ENSG00000160972.5|protein phosphatase 1, regulatory subunit 16A
hg19_v2_chr8_+_22436635_22436663	0.664487	SMAD4	ENST00000452226.1|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000397760.4|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000339162.7|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000397761.2|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr15_-_40633101_40633171	0.662579	SMAD4	ENST00000559313.1|C15orf52|ENSG00000188549.8|chromosome 15 open reading frame 52
hg19_v2_chr19_+_49128209_49128254	0.660495	SMAD4	ENST00000599748.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000443164.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000599029.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr1_-_44497118_44497176	0.6562	SMAD4	ENST00000537678.1|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000466926.1|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr19_+_50094866_50094927	0.651883	SMAD4	ENST00000418929.2|PRR12|ENSG00000126464.9|proline rich 12
hg19_v2_chr22_-_50968419_50968485	0.650706	SMAD4	ENST00000425169.1|TYMP|ENSG00000025708.8|thymidine phosphorylase 	ENST00000395680.1|TYMP|ENSG00000025708.8|thymidine phosphorylase 	ENST00000395681.1|TYMP|ENSG00000025708.8|thymidine phosphorylase 	ENST00000395678.3|TYMP|ENSG00000025708.8|thymidine phosphorylase 	ENST00000252029.3|TYMP|ENSG00000025708.8|thymidine phosphorylase
hg19_v2_chr19_-_7553852_7553874	0.649741	SMAD4	ENST00000593547.1|PEX11G|ENSG00000104883.3|peroxisomal biogenesis factor 11 gamma
hg19_v2_chr19_-_7553889_7553929	0.649665	SMAD4	ENST00000221480.1|PEX11G|ENSG00000104883.3|peroxisomal biogenesis factor 11 gamma
hg19_v2_chr16_+_57662527_57662556	0.645228	SMAD4	ENST00000563374.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568234.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000565770.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000564338.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566164.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr11_-_44972418_44972452	0.644032	SMAD4	ENST00000525680.1|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11 	ENST00000528290.1|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11 	ENST00000530035.1|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11
hg19_v2_chr17_+_73642486_73642517	0.637519	SMAD4	ENST00000579469.1|SMIM6|ENSG00000259120.2|small integral membrane protein 6
hg19_v2_chr19_-_41222775_41222807	0.636717	SMAD4	ENST00000324464.3|ADCK4|ENSG00000123815.7|aarF domain containing kinase 4 	ENST00000450541.1|ADCK4|ENSG00000123815.7|aarF domain containing kinase 4 	ENST00000594720.1|ADCK4|ENSG00000123815.7|aarF domain containing kinase 4
hg19_v2_chr19_-_40324767_40324841	0.63584	SMAD4	ENST00000601972.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000430012.2|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000323039.5|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000348817.3|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr22_-_51066521_51066607	0.635486	SMAD4	ENST00000395621.3|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000395619.3|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000356098.5|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000216124.5|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000453344.2|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000547307.1|ARSA|ENSG00000100299.13|arylsulfatase A 	ENST00000547805.1|ARSA|ENSG00000100299.13|arylsulfatase A
hg19_v2_chr19_-_48894104_48894170	0.633444	SMAD4	ENST00000597017.1|KDELR1|ENSG00000105438.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
hg19_v2_chr11_-_72414430_72414456	0.632991	SMAD4	ENST00000452383.2|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr7_-_150777949_150777966	0.632051	SMAD4	ENST00000482571.1|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase
hg19_v2_chr6_+_30850697_30850753	0.625767	SMAD4	ENST00000509639.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000412274.2|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000507901.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000507046.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000437124.2|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000454612.2|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000396342.2|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr4_-_13546632_13546674	0.625068	SMAD4	ENST00000382438.5|NKX3-2|ENSG00000109705.7|NK3 homeobox 2
hg19_v2_chr16_+_68279207_68279252	0.624472	SMAD4	ENST00000413021.2|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000565744.1|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000219345.5|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV
hg19_v2_chr6_-_31612808_31612846	0.624418	SMAD4	ENST00000438149.1|BAG6|ENSG00000204463.8|BCL2-associated athanogene 6
hg19_v2_chr4_+_926214_926285	0.620575	SMAD4	ENST00000514453.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000515492.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000509508.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000515740.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000508204.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000510493.1|TMEM175|ENSG00000127419.12|transmembrane protein 175 	ENST00000514546.1|TMEM175|ENSG00000127419.12|transmembrane protein 175
hg19_v2_chr22_+_45072925_45072942	0.613898	SMAD4	ENST00000006251.7|PRR5|ENSG00000186654.16|proline rich 5 (renal)
hg19_v2_chr20_-_1165117_1165117	0.610902	SMAD4	ENST00000381894.3|TMEM74B|ENSG00000125895.5|transmembrane protein 74B
hg19_v2_chr7_-_150777920_150777941	0.610431	SMAD4	ENST00000353841.2|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase 	ENST00000297532.6|FASTK|ENSG00000164896.15|Fas-activated serine/threonine kinase
hg19_v2_chr6_-_43484621_43484706	0.607894	SMAD4	ENST00000506469.1|YIPF3|ENSG00000137207.7|Yip1 domain family, member 3 	ENST00000503972.1|YIPF3|ENSG00000137207.7|Yip1 domain family, member 3
hg19_v2_chr17_-_40828969_40829024	0.606402	SMAD4	ENST00000591022.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000587627.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000293349.6|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chr8_+_22424551_22424585	0.605177	SMAD4	ENST00000523348.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr16_-_57798253_57798301	0.605121	SMAD4	ENST00000565270.1|KIFC3|ENSG00000140859.11|kinesin family member C3
hg19_v2_chr15_-_83224682_83224682	0.597877	SMAD4	ENST00000562833.1|RP11-152F13.10|ENSG00000260836.1|RP11-152F13.10
hg19_v2_chr1_+_1370903_1371119	0.595749	SMAD4	ENST00000338660.5|VWA1|ENSG00000179403.10|von Willebrand factor A domain containing 1 	ENST00000404702.3|VWA1|ENSG00000179403.10|von Willebrand factor A domain containing 1 	ENST00000476993.1|VWA1|ENSG00000179403.10|von Willebrand factor A domain containing 1 	ENST00000471398.1|VWA1|ENSG00000179403.10|von Willebrand factor A domain containing 1
hg19_v2_chr8_-_29940569_29940596	0.595191	SMAD4	ENST00000523761.1|TMEM66|ENSG00000133872.9|transmembrane protein 66
hg19_v2_chr6_-_26285737_26285769	0.593224	SMAD4	ENST00000377727.1|HIST1H4H|ENSG00000158406.2|histone cluster 1, H4h 	ENST00000289352.1|HIST1H4H|ENSG00000158406.2|histone cluster 1, H4h
hg19_v2_chr19_+_11466167_11466180	0.591576	SMAD4	ENST00000591608.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2
hg19_v2_chr3_+_9958870_9959000	0.589697	SMAD4	ENST00000413608.1|IL17RC|ENSG00000163702.14|interleukin 17 receptor C
hg19_v2_chr19_+_33685490_33685490	0.583944	SMAD4	ENST00000253193.7|LRP3|ENSG00000130881.9|low density lipoprotein receptor-related protein 3
hg19_v2_chr17_+_41476327_41476368	0.583718	SMAD4	ENST00000320033.4|ARL4D|ENSG00000175906.4|ADP-ribosylation factor-like 4D
hg19_v2_chr14_-_23451845_23451856	0.582165	SMAD4	ENST00000262713.2|AJUBA|ENSG00000129474.11|ajuba LIM protein
hg19_v2_chr5_-_180242534_180242567	0.578601	SMAD4	ENST00000333055.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 	ENST00000513431.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr17_+_17584763_17584804	0.575927	SMAD4	ENST00000353383.1|RAI1|ENSG00000108557.13|retinoic acid induced 1
hg19_v2_chr19_+_41092680_41092802	0.575446	SMAD4	ENST00000594298.1|SHKBP1|ENSG00000160410.10|SH3KBP1 binding protein 1 	ENST00000597396.1|SHKBP1|ENSG00000160410.10|SH3KBP1 binding protein 1
hg19_v2_chr11_+_64053890_64054114	0.575047	SMAD4	ENST00000438980.2|GPR137|ENSG00000173264.9|G protein-coupled receptor 137 	ENST00000313074.3|GPR137|ENSG00000173264.9|G protein-coupled receptor 137 	ENST00000542190.1|GPR137|ENSG00000173264.9|G protein-coupled receptor 137 	ENST00000541952.1|GPR137|ENSG00000173264.9|G protein-coupled receptor 137
hg19_v2_chr7_+_99699179_99699214	0.57308	SMAD4	ENST00000438383.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000429084.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000359593.4|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000439416.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr19_+_677885_677942	0.572112	SMAD4	ENST00000591552.2|FSTL3|ENSG00000070404.5|follistatin-like 3 (secreted glycoprotein)
hg19_v2_chr19_+_49617581_49617607	0.570571	SMAD4	ENST00000391864.3|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr11_-_65150103_65150148	0.566945	SMAD4	ENST00000294187.6|SLC25A45|ENSG00000162241.8|solute carrier family 25, member 45 	ENST00000398802.1|SLC25A45|ENSG00000162241.8|solute carrier family 25, member 45 	ENST00000360662.3|SLC25A45|ENSG00000162241.8|solute carrier family 25, member 45 	ENST00000377152.2|SLC25A45|ENSG00000162241.8|solute carrier family 25, member 45 	ENST00000530936.1|SLC25A45|ENSG00000162241.8|solute carrier family 25, member 45
hg19_v2_chr11_-_798305_798321	0.566875	SMAD4	ENST00000531514.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr20_-_36794938_36794980	0.566623	SMAD4	ENST00000453095.1|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr12_-_54778244_54778378	0.565985	SMAD4	ENST00000549937.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr15_+_75335604_75335633	0.563642	SMAD4	ENST00000563393.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase
hg19_v2_chr7_+_7222157_7222193	0.562349	SMAD4	ENST00000419721.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr19_+_48898132_48898132	0.562153	SMAD4	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr3_+_126243126_126243153	0.559852	SMAD4	ENST00000319340.2|CHST13|ENSG00000180767.5|carbohydrate (chondroitin 4) sulfotransferase 13
hg19_v2_chr1_+_110162448_110162517	0.557343	SMAD4	ENST00000342115.4|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000469039.2|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000474459.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000528667.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr19_-_10227503_10227591	0.555158	SMAD4	ENST00000593054.1|EIF3G|ENSG00000130811.6|eukaryotic translation initiation factor 3, subunit G
hg19_v2_chr22_+_45072958_45072972	0.547349	SMAD4	ENST00000403581.1|PRR5|ENSG00000186654.16|proline rich 5 (renal)
hg19_v2_chr2_+_217524323_217524341	0.545824	SMAD4	ENST00000456764.1|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chr2_-_219151984_219152031	0.54546	SMAD4	ENST00000444000.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1 	ENST00000418569.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1
hg19_v2_chr8_-_144886321_144886321	0.540149	SMAD4	ENST00000526832.1|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein
hg19_v2_chr7_+_100081542_100081567	0.539506	SMAD4	ENST00000300179.2|NYAP1|ENSG00000166924.4|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1 	ENST00000423930.1|NYAP1|ENSG00000166924.4|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
hg19_v2_chr19_-_2042065_2042139	0.53917	SMAD4	ENST00000591588.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591142.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr17_-_40829026_40829048	0.539063	SMAD4	ENST00000412503.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chr8_-_48651648_48651648	0.534844	SMAD4	ENST00000408965.3|CEBPD|ENSG00000221869.4|CCAAT/enhancer binding protein (C/EBP), delta
hg19_v2_chr19_+_41305740_41305751	0.532839	SMAD4	ENST00000596517.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2
hg19_v2_chr14_-_23451467_23451713	0.532002	SMAD4	ENST00000555074.1|RP11-298I3.5|ENSG00000259132.1|RP11-298I3.5	ENST00000361265.4|AJUBA|ENSG00000129474.11|ajuba LIM protein
hg19_v2_chr10_-_93669233_93669263	0.530784	SMAD4	ENST00000311575.5|FGFBP3|ENSG00000174721.9|fibroblast growth factor binding protein 3
hg19_v2_chr14_+_102276192_102276208	0.527222	SMAD4	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr8_+_22436248_22436259	0.523862	SMAD4	ENST00000308354.7|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr19_+_49661079_49661105	0.52356	SMAD4	ENST00000355712.5|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr19_-_49015050_49015111	0.521393	SMAD4	ENST00000600059.1|LMTK3|ENSG00000142235.4|lemur tyrosine kinase 3
hg19_v2_chr19_+_40873617_40873641	0.520993	SMAD4	ENST00000599353.1|PLD3|ENSG00000105223.14|phospholipase D family, member 3
hg19_v2_chr7_+_99699280_99699335	0.518047	SMAD4	ENST00000421755.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr16_+_616995_617041	0.515616	SMAD4	ENST00000293874.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENST00000424439.2|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000540585.1|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000409527.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q
hg19_v2_chr22_-_27620603_27620700	0.514392	SMAD4	ENST00000418271.1|RP5-1172A22.1|ENSG00000233521.1|RP5-1172A22.1	ENST00000444114.1|RP5-1172A22.1|ENSG00000233521.1|RP5-1172A22.1
hg19_v2_chr17_+_18163848_18163985	0.513725	SMAD4	ENST00000323019.4|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2 	ENST00000578174.1|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2 	ENST00000395704.4|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2 	ENST00000395703.4|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2 	ENST00000578621.1|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2 	ENST00000579341.1|MIEF2|ENSG00000177427.8|mitochondrial elongation factor 2
hg19_v2_chr6_-_32908792_32908847	0.513192	SMAD4	ENST00000418107.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr16_+_58059470_58059470	0.512662	SMAD4	ENST00000219271.3|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr19_-_55881741_55881837	0.512483	SMAD4	ENST00000264563.2|IL11|ENSG00000095752.2|interleukin 11 	ENST00000590625.1|IL11|ENSG00000095752.2|interleukin 11 	ENST00000585513.1|IL11|ENSG00000095752.2|interleukin 11
hg19_v2_chr22_+_40573921_40573946	0.505496	SMAD4	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr2_-_227664474_227664508	0.50385	SMAD4	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr5_-_132166579_132166616	0.499575	SMAD4	ENST00000378679.3|SHROOM1|ENSG00000164403.10|shroom family member 1
hg19_v2_chr16_+_31483374_31483390	0.499159	SMAD4	ENST00000394863.3|TGFB1I1|ENSG00000140682.14|transforming growth factor beta 1 induced transcript 1
hg19_v2_chr5_-_180242576_180242585	0.493471	SMAD4	ENST00000514438.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr1_-_27930102_27930143	0.492769	SMAD4	ENST00000247087.5|AHDC1|ENSG00000126705.9|AT hook, DNA binding motif, containing 1 	ENST00000374011.2|AHDC1|ENSG00000126705.9|AT hook, DNA binding motif, containing 1
hg19_v2_chr16_+_532503_532657	0.492272	SMAD4	ENST00000412256.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr19_-_51017881_51017953	0.492249	SMAD4	ENST00000601207.1|ASPDH|ENSG00000204653.5|aspartate dehydrogenase domain containing 	ENST00000598657.1|ASPDH|ENSG00000204653.5|aspartate dehydrogenase domain containing 	ENST00000376916.3|ASPDH|ENSG00000204653.5|aspartate dehydrogenase domain containing
hg19_v2_chr2_-_112237835_112237844	0.490584	SMAD4	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr6_+_24357131_24357131	0.487644	SMAD4	ENST00000274766.1|KAAG1|ENSG00000146049.1|kidney associated antigen 1
hg19_v2_chr14_-_23822061_23822072	0.486239	SMAD4	ENST00000397260.3|SLC22A17|ENSG00000092096.10|solute carrier family 22, member 17
hg19_v2_chr11_+_63998006_63998044	0.484206	SMAD4	ENST00000355040.4|DNAJC4|ENSG00000110011.9|DnaJ (Hsp40) homolog, subfamily C, member 4
hg19_v2_chr16_-_30905584_30905623	0.483815	SMAD4	ENST00000380317.4|BCL7C|ENSG00000099385.7|B-cell CLL/lymphoma 7C
hg19_v2_chr19_-_59031118_59031193	0.482495	SMAD4	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr19_+_49838653_49838736	0.481528	SMAD4	ENST00000598095.1|CD37|ENSG00000104894.7|CD37 molecule 	ENST00000426897.2|CD37|ENSG00000104894.7|CD37 molecule 	ENST00000323906.4|CD37|ENSG00000104894.7|CD37 molecule 	ENST00000535669.2|CD37|ENSG00000104894.7|CD37 molecule 	ENST00000597602.1|CD37|ENSG00000104894.7|CD37 molecule 	ENST00000595660.1|CD37|ENSG00000104894.7|CD37 molecule
hg19_v2_chr19_+_56653064_56653103	0.481144	SMAD4	ENST00000593100.1|ZNF444|ENSG00000167685.10|zinc finger protein 444
hg19_v2_chr19_-_59030921_59030974	0.476337	SMAD4	ENST00000354590.3|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45 	ENST00000596739.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr1_+_1334895_1334912	0.474643	SMAD4	ENST00000448629.2|RP4-758J18.2|ENSG00000224870.3|HCG20425, isoform CRA_a; Uncharacterized protein; cDNA FLJ53815  	ENST00000444362.1|RP4-758J18.2|ENSG00000224870.3|HCG20425, isoform CRA_a; Uncharacterized protein; cDNA FLJ53815
hg19_v2_chr16_+_70695570_70695570	0.474304	SMAD4	ENST00000597002.1|FLJ00418|ENSG00000268927.1|FLJ00418
hg19_v2_chr1_-_204654826_204654873	0.473973	SMAD4	ENST00000367177.3|LRRN2|ENSG00000170382.7|leucine rich repeat neuronal 2
hg19_v2_chr22_-_20731541_20731541	0.472609	SMAD4	ENST00000292729.8|USP41|ENSG00000161133.12|ubiquitin specific peptidase 41
hg19_v2_chr11_+_67777751_67777808	0.472211	SMAD4	ENST00000316367.6|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1 	ENST00000007633.8|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1 	ENST00000342456.6|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1
hg19_v2_chr3_+_9834227_9834260	0.468761	SMAD4	ENST00000287613.7|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa 	ENST00000397261.3|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr11_-_568369_568457	0.468612	SMAD4	ENST00000534540.1|MIR210HG|ENSG00000247095.2|MIR210 host gene (non-protein coding) 	ENST00000528245.1|MIR210HG|ENSG00000247095.2|MIR210 host gene (non-protein coding) 	ENST00000500447.1|MIR210HG|ENSG00000247095.2|MIR210 host gene (non-protein coding) 	ENST00000533920.1|MIR210HG|ENSG00000247095.2|MIR210 host gene (non-protein coding)
hg19_v2_chr19_-_47288162_47288207	0.468067	SMAD4	ENST00000594991.1|SLC1A5|ENSG00000105281.8|solute carrier family 1 (neutral amino acid transporter), member 5
hg19_v2_chr1_+_223889310_223889347	0.465785	SMAD4	ENST00000434648.1|CAPN2|ENSG00000162909.13|calpain 2, (m/II) large subunit
hg19_v2_chr17_+_36886478_36886512	0.465398	SMAD4	ENST00000439660.2|CISD3|ENSG00000230055.2|CDGSH iron sulfur domain 3
hg19_v2_chr19_+_52076425_52076581	0.465171	SMAD4	ENST00000436511.2|ZNF175|ENSG00000105497.3|zinc finger protein 175
hg19_v2_chr14_-_23426322_23426336	0.461981	SMAD4	ENST00000555367.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4
hg19_v2_chr3_-_47950745_47950757	0.460965	SMAD4	ENST00000429422.1|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr5_+_149877440_149877489	0.460561	SMAD4	ENST00000518299.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr7_-_156803329_156803362	0.459844	SMAD4	ENST00000252971.6|MNX1|ENSG00000130675.10|motor neuron and pancreas homeobox 1
hg19_v2_chr22_+_50639408_50639479	0.459642	SMAD4	ENST00000380903.2|SELO|ENSG00000073169.9|Selenoprotein O
hg19_v2_chr22_-_24322019_24322019	0.459569	SMAD4	ENST00000350608.3|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr19_+_50832943_50832951	0.459132	SMAD4	ENST00000542413.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2
hg19_v2_chr12_-_42631529_42631602	0.459093	SMAD4	ENST00000548917.1|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr19_+_56186606_56186655	0.45863	SMAD4	ENST00000085079.7|EPN1|ENSG00000063245.10|epsin 1
hg19_v2_chr19_+_3708338_3708374	0.458342	SMAD4	ENST00000590545.1|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr9_-_92051354_92051386	0.45608	SMAD4	ENST00000418828.1|SEMA4D|ENSG00000187764.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
hg19_v2_chr18_+_3449330_3449411	0.454562	SMAD4	ENST00000549253.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr1_+_155178481_155178493	0.451318	SMAD4	ENST00000368376.3|MTX1|ENSG00000173171.10|metaxin 1
hg19_v2_chr17_+_77020224_77020262	0.447938	SMAD4	ENST00000339142.2|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr17_-_40288449_40288502	0.446829	SMAD4	ENST00000552162.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000550504.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr1_-_156390128_156390148	0.446484	SMAD4	ENST00000368242.3|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61
hg19_v2_chr17_+_77020325_77020348	0.445788	SMAD4	ENST00000311661.4|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr17_+_36873677_36873800	0.444882	SMAD4	ENST00000471200.1|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr5_+_140529630_140529683	0.443507	SMAD4	ENST00000543635.1|PCDHB6|ENSG00000113211.3|protocadherin beta 6
hg19_v2_chr1_-_26147149_26147288	0.443373	SMAD4	ENST00000536896.1|AL020996.1|ENSG00000223474.2|Uncharacterized protein
hg19_v2_chr19_+_36359341_36359352	0.440946	SMAD4	ENST00000221891.4|APLP1|ENSG00000105290.7|amyloid beta (A4) precursor-like protein 1
hg19_v2_chr4_-_926069_926123	0.440305	SMAD4	ENST00000314167.4|GAK|ENSG00000178950.12|cyclin G associated kinase 	ENST00000502656.1|GAK|ENSG00000178950.12|cyclin G associated kinase
hg19_v2_chr17_+_18128896_18128983	0.440078	SMAD4	ENST00000316843.4|LLGL1|ENSG00000131899.6|lethal giant larvae homolog 1 (Drosophila)
hg19_v2_chr16_+_66638616_66638663	0.438552	SMAD4	ENST00000564060.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000565922.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3
hg19_v2_chr14_-_23284703_23284732	0.438045	SMAD4	ENST00000555911.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr16_-_67260901_67260952	0.437032	SMAD4	ENST00000341546.3|LRRC29|ENSG00000125122.10|leucine rich repeat containing 29 	ENST00000409509.1|LRRC29|ENSG00000125122.10|leucine rich repeat containing 29 	ENST00000433915.1|LRRC29|ENSG00000125122.10|leucine rich repeat containing 29 	ENST00000454102.2|AC040160.1|ENSG00000237102.2|Uncharacterized protein; cDNA FLJ57407, weakly similar to Mus musculus leucine rich repeat containing 29 (Lrrc29), mRNA
hg19_v2_chr22_-_24322660_24322660	0.436732	SMAD4	ENST00000404092.1|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr16_+_30953696_30953753	0.435873	SMAD4	ENST00000566320.2|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19 	ENST00000565939.1|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr1_+_156254070_156254143	0.435847	SMAD4	ENST00000405535.2|TMEM79|ENSG00000163472.14|transmembrane protein 79 	ENST00000456810.1|TMEM79|ENSG00000163472.14|transmembrane protein 79
hg19_v2_chr2_-_70780572_70780622	0.434855	SMAD4	ENST00000450929.1|TGFA|ENSG00000163235.11|transforming growth factor, alpha
hg19_v2_chr1_-_44497024_44497068	0.434343	SMAD4	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr3_+_50654821_50654956	0.433543	SMAD4	ENST00000457064.1|MAPKAPK3|ENSG00000114738.6|mitogen-activated protein kinase-activated protein kinase 3
hg19_v2_chr1_-_17766198_17766232	0.432795	SMAD4	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr19_+_7580944_7581031	0.431809	SMAD4	ENST00000597229.1|ZNF358|ENSG00000198816.5|zinc finger protein 358
hg19_v2_chr14_-_23446021_23446070	0.430611	SMAD4	ENST00000553592.1|AJUBA|ENSG00000129474.11|ajuba LIM protein
hg19_v2_chr19_-_47290535_47290599	0.430243	SMAD4	ENST00000412532.2|SLC1A5|ENSG00000105281.8|solute carrier family 1 (neutral amino acid transporter), member 5
hg19_v2_chr20_-_62203808_62203808	0.428979	SMAD4	ENST00000467148.1|HELZ2|ENSG00000130589.12|helicase with zinc finger 2, transcriptional coactivator
hg19_v2_chr19_+_49055332_49055410	0.428447	SMAD4	ENST00000201586.2|SULT2B1|ENSG00000088002.7|sulfotransferase family, cytosolic, 2B, member 1
hg19_v2_chr19_-_38806540_38806554	0.427745	SMAD4	ENST00000592694.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae)
hg19_v2_chr5_+_176784837_176784936	0.427334	SMAD4	ENST00000408923.3|RGS14|ENSG00000169220.13|regulator of G-protein signaling 14
hg19_v2_chr6_-_33756867_33756950	0.427245	SMAD4	ENST00000293760.5|LEMD2|ENSG00000161904.7|LEM domain containing 2
hg19_v2_chr8_-_130587237_130587250	0.427125	SMAD4	ENST00000520048.1|CCDC26|ENSG00000229140.4|coiled-coil domain containing 26
hg19_v2_chr9_+_34652164_34652206	0.426884	SMAD4	ENST00000441545.2|IL11RA|ENSG00000137070.13|interleukin 11 receptor, alpha 	ENST00000553620.1|IL11RA|ENSG00000137070.13|interleukin 11 receptor, alpha
hg19_v2_chr22_+_18893736_18893804	0.426774	SMAD4	ENST00000331444.6|DGCR6|ENSG00000183628.8|DiGeorge syndrome critical region gene 6
hg19_v2_chr15_+_101417919_101417955	0.422905	SMAD4	ENST00000561338.1|ALDH1A3|ENSG00000184254.12|aldehyde dehydrogenase 1 family, member A3
hg19_v2_chr15_-_44069513_44069513	0.422342	SMAD4	ENST00000433927.1|ELL3|ENSG00000128886.7|elongation factor RNA polymerase II-like 3
hg19_v2_chr3_-_48514604_48514617	0.422074	SMAD4	ENST00000426002.1|SHISA5|ENSG00000164054.11|shisa family member 5
hg19_v2_chr7_-_100065686_100065701	0.420849	SMAD4	ENST00000423266.1|TSC22D4|ENSG00000166925.4|TSC22 domain family, member 4 	ENST00000456330.1|TSC22D4|ENSG00000166925.4|TSC22 domain family, member 4
hg19_v2_chr11_-_61596753_61596790	0.419274	SMAD4	ENST00000448607.1|FADS1|ENSG00000149485.12|fatty acid desaturase 1 	ENST00000421879.1|FADS1|ENSG00000149485.12|fatty acid desaturase 1
hg19_v2_chr1_-_24127256_24127275	0.419003	SMAD4	ENST00000418277.1|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase
hg19_v2_chr12_+_98987369_98987503	0.418533	SMAD4	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr13_+_31309645_31309726	0.418229	SMAD4	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chr22_-_31503490_31503584	0.415833	SMAD4	ENST00000400299.2|SELM|ENSG00000198832.6|Selenoprotein M
hg19_v2_chr9_+_131133598_131133661	0.415659	SMAD4	ENST00000372853.4|URM1|ENSG00000167118.6|ubiquitin related modifier 1 	ENST00000452446.1|URM1|ENSG00000167118.6|ubiquitin related modifier 1 	ENST00000372850.1|URM1|ENSG00000167118.6|ubiquitin related modifier 1 	ENST00000372847.1|URM1|ENSG00000167118.6|ubiquitin related modifier 1
hg19_v2_chr3_+_106959552_106959576	0.415161	SMAD4	ENST00000473550.1|LINC00883|ENSG00000243701.1|long intergenic non-protein coding RNA 883
hg19_v2_chr8_-_145028013_145028088	0.410831	SMAD4	ENST00000354958.2|PLEC|ENSG00000178209.10|plectin
hg19_v2_chr16_-_54963026_54963108	0.410237	SMAD4	ENST00000560208.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding) 	ENST00000557792.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding)
hg19_v2_chr1_+_36023035_36023074	0.409626	SMAD4	ENST00000373253.3|NCDN|ENSG00000020129.11|neurochondrin
hg19_v2_chrX_+_54835493_54835584	0.408254	SMAD4	ENST00000396224.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
hg19_v2_chrX_-_48931648_48931730	0.407957	SMAD4	ENST00000376386.3|PRAF2|ENSG00000243279.2|PRA1 domain family, member 2 	ENST00000376390.4|PRAF2|ENSG00000243279.2|PRA1 domain family, member 2
hg19_v2_chr2_+_220306238_220306354	0.407638	SMAD4	ENST00000435853.1|SPEG|ENSG00000072195.10|SPEG complex locus
hg19_v2_chr7_+_76109827_76109827	0.40755	SMAD4	ENST00000446820.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr12_+_52445191_52445243	0.407166	SMAD4	ENST00000243050.1|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1 	ENST00000394825.1|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1 	ENST00000550763.1|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1 	ENST00000394824.2|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1 	ENST00000548232.1|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1 	ENST00000562373.1|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1
hg19_v2_chr2_+_95963052_95963106	0.404475	SMAD4	ENST00000295225.5|KCNIP3|ENSG00000115041.8|Kv channel interacting protein 3, calsenilin
hg19_v2_chr17_+_8191815_8192025	0.403715	SMAD4	ENST00000226105.6|RANGRF|ENSG00000108961.9|RAN guanine nucleotide release factor 	ENST00000407006.4|RANGRF|ENSG00000108961.9|RAN guanine nucleotide release factor 	ENST00000580434.1|RANGRF|ENSG00000108961.9|RAN guanine nucleotide release factor 	ENST00000439238.3|RANGRF|ENSG00000108961.9|RAN guanine nucleotide release factor
hg19_v2_chr22_+_25003568_25003597	0.403433	SMAD4	ENST00000447416.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1
hg19_v2_chr17_-_18585131_18585171	0.401512	SMAD4	ENST00000443457.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B 	ENST00000583002.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B
hg19_v2_chr16_-_19896832_19896858	0.399808	SMAD4	ENST00000537135.1|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B 	ENST00000564449.1|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B
hg19_v2_chr14_-_21562648_21562659	0.399091	SMAD4	ENST00000555270.1|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr12_-_52715179_52715182	0.399	SMAD4	ENST00000293670.3|KRT83|ENSG00000170523.3|keratin 83
hg19_v2_chr14_+_35451880_35451920	0.398972	SMAD4	ENST00000554803.1|SRP54|ENSG00000100883.7|signal recognition particle 54kDa 	ENST00000555746.1|SRP54|ENSG00000100883.7|signal recognition particle 54kDa
hg19_v2_chr1_+_9005917_9005946	0.398728	SMAD4	ENST00000549778.1|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000480186.3|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377443.2|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377436.3|CA6|ENSG00000131686.10|carbonic anhydrase VI 	ENST00000377442.2|CA6|ENSG00000131686.10|carbonic anhydrase VI
hg19_v2_chr9_-_130497565_130497609	0.397291	SMAD4	ENST00000336067.6|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000373281.5|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000373284.5|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000458505.3|TOR2A|ENSG00000160404.13|torsin family 2, member A
hg19_v2_chr1_+_110453203_110453255	0.397056	SMAD4	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr19_+_18544045_18544107	0.396999	SMAD4	ENST00000599699.2|SSBP4|ENSG00000130511.11|single stranded DNA binding protein 4
hg19_v2_chr14_-_23446003_23446019	0.39686	SMAD4	ENST00000553911.1|AJUBA|ENSG00000129474.11|ajuba LIM protein
hg19_v2_chr7_-_100881041_100881067	0.396431	SMAD4	ENST00000412417.1|CLDN15|ENSG00000106404.9|claudin 15 	ENST00000414035.1|CLDN15|ENSG00000106404.9|claudin 15
hg19_v2_chr11_-_71781096_71781147	0.396052	SMAD4	ENST00000535087.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1 	ENST00000535838.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr5_-_137090028_137090075	0.394361	SMAD4	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr22_-_20231207_20231207	0.393148	SMAD4	ENST00000425986.1|RTN4R|ENSG00000040608.9|reticulon 4 receptor
hg19_v2_chr1_+_44457261_44457280	0.391634	SMAD4	ENST00000372318.3|CCDC24|ENSG00000159214.8|coiled-coil domain containing 24
hg19_v2_chr22_+_50628999_50629027	0.389185	SMAD4	ENST00000395827.1|TRABD|ENSG00000170638.5|TraB domain containing
hg19_v2_chr1_-_230991747_230991782	0.389087	SMAD4	ENST00000523410.1|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr1_+_63788730_63788730	0.388245	SMAD4	ENST00000371116.2|FOXD3|ENSG00000187140.4|forkhead box D3
hg19_v2_chr8_-_28965684_28965712	0.387497	SMAD4	ENST00000523130.1|KIF13B|ENSG00000197892.8|kinesin family member 13B
hg19_v2_chr11_-_47270341_47270457	0.385954	SMAD4	ENST00000529444.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000530453.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000537863.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000529788.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000444355.2|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000527256.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000529663.1|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal 	ENST00000256997.3|ACP2|ENSG00000134575.5|acid phosphatase 2, lysosomal
hg19_v2_chr1_+_155178518_155178600	0.385141	SMAD4	ENST00000316721.4|MTX1|ENSG00000173171.10|metaxin 1
hg19_v2_chr19_-_3557401_3557510	0.384642	SMAD4	ENST00000389395.3|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12 	ENST00000398558.4|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr12_+_53443963_53443970	0.383994	SMAD4	ENST00000546602.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000552570.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000549700.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr20_-_23967432_23967512	0.383136	SMAD4	ENST00000286890.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1 	ENST00000278765.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1
hg19_v2_chr17_+_73642315_73642344	0.381827	SMAD4	ENST00000556126.2|SMIM6|ENSG00000259120.2|small integral membrane protein 6
hg19_v2_chr22_+_27068704_27068763	0.381793	SMAD4	ENST00000444388.1|CTA-211A9.5|ENSG00000244625.1|CTA-211A9.5	ENST00000450963.1|CTA-211A9.5|ENSG00000244625.1|CTA-211A9.5	ENST00000449017.1|CTA-211A9.5|ENSG00000244625.1|CTA-211A9.5
hg19_v2_chr5_-_150727111_150727151	0.380121	SMAD4	ENST00000335244.4|SLC36A2|ENSG00000186335.4|solute carrier family 36 (proton/amino acid symporter), member 2 	ENST00000521967.1|SLC36A2|ENSG00000186335.4|solute carrier family 36 (proton/amino acid symporter), member 2
hg19_v2_chr2_+_113033164_113033219	0.377519	SMAD4	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr16_+_3014269_3014313	0.376932	SMAD4	ENST00000575885.1|KREMEN2|ENSG00000131650.9|kringle containing transmembrane protein 2 	ENST00000571007.1|KREMEN2|ENSG00000131650.9|kringle containing transmembrane protein 2 	ENST00000319500.6|KREMEN2|ENSG00000131650.9|kringle containing transmembrane protein 2
hg19_v2_chr2_-_74667612_74667758	0.376815	SMAD4	ENST00000305557.5|RTKN|ENSG00000114993.11|rhotekin 	ENST00000233330.6|RTKN|ENSG00000114993.11|rhotekin
hg19_v2_chr19_+_42788172_42788209	0.374449	SMAD4	ENST00000160740.3|CIC|ENSG00000079432.3|capicua transcriptional repressor
hg19_v2_chr20_+_816695_816711	0.374183	SMAD4	ENST00000246100.3|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr14_+_21538517_21538539	0.374071	SMAD4	ENST00000298693.3|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40
hg19_v2_chr1_+_22138758_22138856	0.37316	SMAD4	ENST00000344642.2|LDLRAD2|ENSG00000187942.7|low density lipoprotein receptor class A domain containing 2 	ENST00000543870.1|LDLRAD2|ENSG00000187942.7|low density lipoprotein receptor class A domain containing 2
hg19_v2_chr19_-_44285401_44285446	0.3726	SMAD4	ENST00000262888.3|KCNN4|ENSG00000104783.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
hg19_v2_chr19_+_35739897_35740004	0.372079	SMAD4	ENST00000605618.1|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor 	ENST00000427250.1|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor 	ENST00000601623.1|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor
hg19_v2_chr5_+_60933634_60933637	0.37179	SMAD4	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr12_+_1738363_1738410	0.370855	SMAD4	ENST00000397196.2|WNT5B|ENSG00000111186.8|wingless-type MMTV integration site family, member 5B
hg19_v2_chr5_-_66942617_66942643	0.370203	SMAD4	ENST00000507298.1|RP11-83M16.5|ENSG00000249736.1|RP11-83M16.5
hg19_v2_chr8_-_145743164_145743236	0.369784	SMAD4	ENST00000428558.2|RECQL4|ENSG00000160957.8|RecQ protein-like 4
hg19_v2_chr17_-_78009647_78009681	0.369584	SMAD4	ENST00000310924.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr12_-_7281469_7281538	0.368444	SMAD4	ENST00000542370.1|RBP5|ENSG00000139194.3|retinol binding protein 5, cellular 	ENST00000266560.3|RBP5|ENSG00000139194.3|retinol binding protein 5, cellular
hg19_v2_chr7_+_65939543_65939543	0.368393	SMAD4	ENST00000600021.1|AC008267.1|ENSG00000267941.1|HCG1983814; Uncharacterized protein
hg19_v2_chr11_-_8739566_8739612	0.368331	SMAD4	ENST00000533020.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr22_+_18893816_18893866	0.368122	SMAD4	ENST00000608842.1|DGCR6|ENSG00000183628.8|DiGeorge syndrome critical region gene 6
hg19_v2_chr17_-_43487780_43487792	0.367571	SMAD4	ENST00000532038.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27 	ENST00000528677.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27
hg19_v2_chr15_-_45480153_45480171	0.366731	SMAD4	ENST00000560471.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F 	ENST00000560540.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr14_+_21538429_21538469	0.366662	SMAD4	ENST00000298694.4|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40 	ENST00000555038.1|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40
hg19_v2_chr14_+_21156915_21156943	0.366417	SMAD4	ENST00000397990.4|ANG|ENSG00000214274.5|angiogenin, ribonuclease, RNase A family, 5 	ENST00000555597.1|RNASE4|ENSG00000258818.2|ribonuclease, RNase A family, 4
hg19_v2_chr2_-_27486951_27487004	0.366315	SMAD4	ENST00000432351.1|SLC30A3|ENSG00000115194.6|solute carrier family 30 (zinc transporter), member 3
hg19_v2_chr20_-_62199427_62199427	0.365555	SMAD4	ENST00000427522.2|HELZ2|ENSG00000130589.12|helicase with zinc finger 2, transcriptional coactivator
hg19_v2_chr10_-_126432619_126432663	0.365225	SMAD4	ENST00000337318.3|FAM53B|ENSG00000189319.9|family with sequence similarity 53, member B
hg19_v2_chr20_+_43343476_43343487	0.364605	SMAD4	ENST00000372868.2|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr19_+_5690207_5690296	0.364067	SMAD4	ENST00000347512.3|RPL36|ENSG00000130255.8|ribosomal protein L36
hg19_v2_chr19_-_2739992_2740027	0.363188	SMAD4	ENST00000545664.1|SLC39A3|ENSG00000141873.6|solute carrier family 39 (zinc transporter), member 3 	ENST00000589363.1|SLC39A3|ENSG00000141873.6|solute carrier family 39 (zinc transporter), member 3 	ENST00000455372.2|SLC39A3|ENSG00000141873.6|solute carrier family 39 (zinc transporter), member 3
hg19_v2_chr7_-_27219849_27219880	0.361395	SMAD4	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr19_+_56154913_56155176	0.360794	SMAD4	ENST00000270451.5|ZNF581|ENSG00000171425.5|zinc finger protein 581 	ENST00000588537.1|ZNF581|ENSG00000171425.5|zinc finger protein 581
hg19_v2_chr19_+_35739631_35739675	0.359401	SMAD4	ENST00000602003.1|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor 	ENST00000360798.3|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor 	ENST00000354900.3|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor
hg19_v2_chr19_-_38806390_38806439	0.357286	SMAD4	ENST00000589247.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000329420.8|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000591784.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae)
hg19_v2_chrX_+_153060090_153060132	0.356628	SMAD4	ENST00000370086.3|SSR4|ENSG00000180879.9|signal sequence receptor, delta 	ENST00000370085.3|SSR4|ENSG00000180879.9|signal sequence receptor, delta
hg19_v2_chr7_-_27219632_27219660	0.355302	SMAD4	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr22_+_20877924_20877934	0.355251	SMAD4	ENST00000445189.1|MED15|ENSG00000099917.13|mediator complex subunit 15
hg19_v2_chr14_-_23426231_23426246	0.355204	SMAD4	ENST00000556915.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4
hg19_v2_chr11_-_6633799_6633898	0.354502	SMAD4	ENST00000299424.4|TAF10|ENSG00000166337.5|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v2_chr22_-_45608324_45608369	0.352647	SMAD4	ENST00000496226.1|KIAA0930|ENSG00000100364.14|KIAA0930 	ENST00000251993.7|KIAA0930|ENSG00000100364.14|KIAA0930
hg19_v2_chr7_+_114562616_114562624	0.351847	SMAD4	ENST00000448022.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr9_-_136039282_136039307	0.350907	SMAD4	ENST00000372036.3|GBGT1|ENSG00000148288.7|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 	ENST00000372038.3|GBGT1|ENSG00000148288.7|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 	ENST00000542690.1|RALGDS|ENSG00000160271.10|ral guanine nucleotide dissociation stimulator 	ENST00000540636.1|GBGT1|ENSG00000148288.7|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 	ENST00000372043.3|GBGT1|ENSG00000148288.7|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
hg19_v2_chr16_-_30022293_30022401	0.349717	SMAD4	ENST00000565273.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000567332.2|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000350119.4|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chr22_+_22676808_22676828	0.349543	SMAD4	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr19_-_47231216_47231383	0.348743	SMAD4	ENST00000594287.2|STRN4|ENSG00000090372.10|striatin, calmodulin binding protein 4
hg19_v2_chr12_+_48147699_48147719	0.348671	SMAD4	ENST00000548498.1|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr9_+_118950325_118950452	0.34851	SMAD4	ENST00000534838.1|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr3_+_38017264_38017388	0.347472	SMAD4	ENST00000436654.1|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr8_+_22250334_22250354	0.347449	SMAD4	ENST00000520832.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr17_+_77018896_77018919	0.347259	SMAD4	ENST00000578229.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr11_+_62496114_62496322	0.344666	SMAD4	ENST00000532583.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr19_+_50832895_50832928	0.344315	SMAD4	ENST00000600355.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2
hg19_v2_chr20_-_56265680_56265764	0.341688	SMAD4	ENST00000414037.1|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr22_+_25003606_25003622	0.341007	SMAD4	ENST00000432867.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1
hg19_v2_chr19_-_37178284_37178351	0.340986	SMAD4	ENST00000425254.2|AC074138.3|ENSG00000225975.2|AC074138.3	ENST00000590952.1|AC074138.3|ENSG00000225975.2|AC074138.3	ENST00000433232.1|AC074138.3|ENSG00000225975.2|AC074138.3
hg19_v2_chr1_-_150946911_150946954	0.339792	SMAD4	ENST00000457392.1|CERS2|ENSG00000143418.15|ceramide synthase 2 	ENST00000421609.1|CERS2|ENSG00000143418.15|ceramide synthase 2
hg19_v2_chr15_-_41836441_41836475	0.337362	SMAD4	ENST00000567866.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000561603.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000304330.4|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000566863.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1
hg19_v2_chr1_-_231560790_231560790	0.336708	SMAD4	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr19_+_5690297_5690327	0.335366	SMAD4	ENST00000582463.1|RPL36|ENSG00000130255.8|ribosomal protein L36 	ENST00000579446.1|RPL36|ENSG00000130255.8|ribosomal protein L36 	ENST00000394580.2|RPL36|ENSG00000130255.8|ribosomal protein L36
hg19_v2_chr19_-_4559814_4559830	0.335063	SMAD4	ENST00000586582.1|SEMA6B|ENSG00000167680.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
hg19_v2_chr1_-_151119087_151119114	0.334704	SMAD4	ENST00000341697.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENST00000368914.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v2_chr11_+_61520075_61520136	0.334262	SMAD4	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr8_-_25281747_25281779	0.334111	SMAD4	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr11_-_71810258_71810304	0.33312	SMAD4	ENST00000544594.1|LAMTOR1|ENSG00000149357.5|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
hg19_v2_chr1_+_1215968_1215968	0.331994	SMAD4	ENST00000338555.2|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit
hg19_v2_chr21_-_44751903_44751935	0.331902	SMAD4	ENST00000450205.1|LINC00322|ENSG00000237864.1|long intergenic non-protein coding RNA 322
hg19_v2_chr3_-_50329990_50330026	0.331773	SMAD4	ENST00000417626.2|IFRD2|ENSG00000214706.6|interferon-related developmental regulator 2
hg19_v2_chr4_-_926161_926185	0.331658	SMAD4	ENST00000511163.1|GAK|ENSG00000178950.12|cyclin G associated kinase
hg19_v2_chr17_-_39942322_39942461	0.331624	SMAD4	ENST00000449889.1|JUP|ENSG00000173801.12|junction plakoglobin 	ENST00000465293.1|JUP|ENSG00000173801.12|junction plakoglobin
hg19_v2_chr19_+_36103631_36103699	0.330862	SMAD4	ENST00000203166.5|HAUS5|ENSG00000249115.4|HAUS augmin-like complex, subunit 5 	ENST00000379045.2|HAUS5|ENSG00000249115.4|HAUS augmin-like complex, subunit 5
hg19_v2_chr1_+_1215816_1215816	0.329383	SMAD4	ENST00000379116.5|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit
hg19_v2_chr16_+_67261008_67261073	0.328893	SMAD4	ENST00000304800.9|TMEM208|ENSG00000168701.14|transmembrane protein 208 	ENST00000563953.1|TMEM208|ENSG00000168701.14|transmembrane protein 208 	ENST00000565201.1|TMEM208|ENSG00000168701.14|transmembrane protein 208
hg19_v2_chr3_+_184055240_184055401	0.326935	SMAD4	ENST00000383847.2|FAM131A|ENSG00000175182.9|family with sequence similarity 131, member A
hg19_v2_chr17_+_38465441_38465481	0.326133	SMAD4	ENST00000577646.1|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000254066.5|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr12_+_7033616_7033637	0.319943	SMAD4	ENST00000356654.4|ATN1|ENSG00000111676.10|atrophin 1
hg19_v2_chr3_-_48601206_48601222	0.317036	SMAD4	ENST00000273610.3|UCN2|ENSG00000145040.3|urocortin 2
hg19_v2_chr6_-_31681839_31681850	0.316231	SMAD4	ENST00000409239.1|LY6G6E|ENSG00000255552.3|lymphocyte antigen 6 complex, locus G6E (pseudogene) 	ENST00000461287.1|XXbac-BPG32J3.20|ENSG00000204422.7|Uncharacterized protein
hg19_v2_chr3_+_52017454_52017572	0.316089	SMAD4	ENST00000476854.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000476351.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000494103.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000404366.2|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000469863.1|ACY1|ENSG00000243989.3|aminoacylase 1
hg19_v2_chr11_+_706113_706213	0.315677	SMAD4	ENST00000318562.8|EPS8L2|ENSG00000177106.10|EPS8-like 2 	ENST00000533256.1|EPS8L2|ENSG00000177106.10|EPS8-like 2 	ENST00000534755.1|EPS8L2|ENSG00000177106.10|EPS8-like 2
hg19_v2_chr11_-_798239_798303	0.315458	SMAD4	ENST00000531437.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr5_-_175612149_175612227	0.315346	SMAD4	ENST00000515403.1|RP11-844P9.2|ENSG00000248596.2|RP11-844P9.2
hg19_v2_chr15_-_88799661_88799755	0.313874	SMAD4	ENST00000360948.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000357724.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000355254.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000317501.3|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3
hg19_v2_chr12_+_53443680_53443858	0.312415	SMAD4	ENST00000314250.6|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2) 	ENST00000451358.1|TENC1|ENSG00000111077.13|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v2_chr12_-_54778471_54778528	0.312175	SMAD4	ENST00000550120.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000394313.2|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000547210.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr22_-_19929321_19929356	0.311979	SMAD4	ENST00000400519.1|TXNRD2|ENSG00000184470.15|thioredoxin reductase 2 	ENST00000535882.1|TXNRD2|ENSG00000184470.15|thioredoxin reductase 2 	ENST00000334363.9|TXNRD2|ENSG00000184470.15|thioredoxin reductase 2 	ENST00000400521.1|TXNRD2|ENSG00000184470.15|thioredoxin reductase 2
hg19_v2_chr12_-_54779511_54779577	0.311662	SMAD4	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr6_+_15246501_15246527	0.309256	SMAD4	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr22_+_25003626_25003645	0.308254	SMAD4	ENST00000451366.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000406383.2|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000428855.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1
hg19_v2_chr10_-_103543145_103543177	0.308187	SMAD4	ENST00000370110.5|NPM3|ENSG00000107833.6|nucleophosmin/nucleoplasmin 3
hg19_v2_chr13_-_79177673_79177701	0.307493	SMAD4	ENST00000377208.5|POU4F1|ENSG00000152192.6|POU class 4 homeobox 1
hg19_v2_chr16_-_1843694_1843711	0.307009	SMAD4	ENST00000569769.1|SPSB3|ENSG00000162032.11|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v2_chr22_+_39436862_39436924	0.305883	SMAD4	ENST00000381565.2|APOBEC3F|ENSG00000128394.12|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F 	ENST00000452957.2|APOBEC3G|ENSG00000239713.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
hg19_v2_chr19_+_4639514_4639575	0.304439	SMAD4	ENST00000327473.4|TNFAIP8L1|ENSG00000185361.4|tumor necrosis factor, alpha-induced protein 8-like 1
hg19_v2_chr22_+_47070490_47070513	0.304378	SMAD4	ENST00000408031.1|GRAMD4|ENSG00000075240.12|GRAM domain containing 4
hg19_v2_chr9_-_139891165_139891255	0.303723	SMAD4	ENST00000494426.1|CLIC3|ENSG00000169583.12|chloride intracellular channel 3
hg19_v2_chr20_-_43753104_43753107	0.3021	SMAD4	ENST00000372785.3|WFDC12|ENSG00000168703.5|WAP four-disulfide core domain 12
hg19_v2_chr11_+_46366918_46366992	0.301587	SMAD4	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr17_-_56494882_56494902	0.301088	SMAD4	ENST00000584437.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr19_+_39616410_39616474	0.300874	SMAD4	ENST00000602004.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599470.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000321944.4|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593480.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000358301.3|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593690.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599386.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4
hg19_v2_chr11_-_67275542_67275562	0.300203	SMAD4	ENST00000531506.1|CDK2AP2|ENSG00000167797.3|cyclin-dependent kinase 2 associated protein 2
hg19_v2_chr18_+_3449695_3449712	0.299562	SMAD4	ENST00000343820.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr12_+_52450298_52450388	0.299403	SMAD4	ENST00000550582.2|NR4A1|ENSG00000123358.15|nuclear receptor subfamily 4, group A, member 1
hg19_v2_chr8_-_144660485_144660521	0.298698	SMAD4	ENST00000276844.7|NAPRT1|ENSG00000147813.11|nicotinate phosphoribosyltransferase domain containing 1 	ENST00000340490.3|NAPRT1|ENSG00000147813.11|nicotinate phosphoribosyltransferase domain containing 1 	ENST00000435154.3|NAPRT1|ENSG00000147813.11|nicotinate phosphoribosyltransferase domain containing 1 	ENST00000426292.3|NAPRT1|ENSG00000147813.11|nicotinate phosphoribosyltransferase domain containing 1
hg19_v2_chr19_-_14168391_14168440	0.297463	SMAD4	ENST00000589048.1|PALM3|ENSG00000187867.4|paralemmin 3
hg19_v2_chr14_+_21152259_21152398	0.297077	SMAD4	ENST00000555835.1|RNASE4|ENSG00000258818.2|ribonuclease, RNase A family, 4 	ENST00000336811.6|ANG|ENSG00000214274.5|angiogenin, ribonuclease, RNase A family, 5
hg19_v2_chr6_+_43027595_43027733	0.297048	SMAD4	ENST00000259708.3|KLC4|ENSG00000137171.10|kinesin light chain 4 	ENST00000472792.1|KLC4|ENSG00000137171.10|kinesin light chain 4 	ENST00000479388.1|KLC4|ENSG00000137171.10|kinesin light chain 4 	ENST00000460283.1|KLC4|ENSG00000137171.10|kinesin light chain 4 	ENST00000394056.2|KLC4|ENSG00000137171.10|kinesin light chain 4
hg19_v2_chr3_-_50605077_50605140	0.294923	SMAD4	ENST00000426034.1|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18 	ENST00000441239.1|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18
hg19_v2_chr6_-_37665751_37665781	0.294712	SMAD4	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr11_-_44972390_44972417	0.294069	SMAD4	ENST00000395648.3|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11 	ENST00000531928.2|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11
hg19_v2_chr11_-_62474803_62474875	0.293772	SMAD4	ENST00000533982.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000360796.5|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr11_-_66103867_66103923	0.293554	SMAD4	ENST00000424433.2|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr11_-_72463421_72463482	0.293269	SMAD4	ENST00000393609.3|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr19_+_10527449_10527619	0.29301	SMAD4	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr7_+_37723420_37723446	0.289506	SMAD4	ENST00000476620.1|EPDR1|ENSG00000086289.7|ependymin related 1
hg19_v2_chr11_-_66104237_66104311	0.285577	SMAD4	ENST00000530056.1|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr19_-_45953983_45954029	0.284799	SMAD4	ENST00000592083.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
hg19_v2_chr4_+_48485341_48485394	0.284381	SMAD4	ENST00000273861.4|SLC10A4|ENSG00000145248.6|solute carrier family 10, member 4
hg19_v2_chr2_-_27718052_27718127	0.283976	SMAD4	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr17_-_7760779_7760896	0.283937	SMAD4	ENST00000335155.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575071.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr1_+_110577229_110577258	0.283844	SMAD4	ENST00000369795.3|STRIP1|ENSG00000143093.10|striatin interacting protein 1 	ENST00000369794.2|STRIP1|ENSG00000143093.10|striatin interacting protein 1
hg19_v2_chr5_-_175964366_175964429	0.283429	SMAD4	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr19_+_41117770_41117817	0.2828	SMAD4	ENST00000601032.1|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr6_+_41010293_41010457	0.282635	SMAD4	ENST00000373161.1|TSPO2|ENSG00000112212.7|translocator protein 2 	ENST00000373158.2|TSPO2|ENSG00000112212.7|translocator protein 2 	ENST00000470917.1|TSPO2|ENSG00000112212.7|translocator protein 2
hg19_v2_chr17_+_1933404_1933457	0.282193	SMAD4	ENST00000263083.6|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1 	ENST00000571418.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr3_-_11610255_11610398	0.281297	SMAD4	ENST00000424529.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr14_+_77790901_77790923	0.281171	SMAD4	ENST00000553586.1|GSTZ1|ENSG00000100577.14|glutathione S-transferase zeta 1 	ENST00000555583.1|GSTZ1|ENSG00000100577.14|glutathione S-transferase zeta 1
hg19_v2_chr1_-_41131326_41131400	0.280942	SMAD4	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr8_+_106330920_106330979	0.280892	SMAD4	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr5_-_177659539_177659598	0.280771	SMAD4	ENST00000476170.2|PHYKPL|ENSG00000175309.10|5-phosphohydroxy-L-lysine phospho-lyase
hg19_v2_chr19_+_4229495_4229539	0.279659	SMAD4	ENST00000221847.5|EBI3|ENSG00000105246.5|Epstein-Barr virus induced 3
hg19_v2_chr19_-_17958771_17958829	0.279389	SMAD4	ENST00000534444.1|JAK3|ENSG00000105639.14|Janus kinase 3
hg19_v2_chr7_+_101928416_101928452	0.278224	SMAD4	ENST00000444095.1|SH2B2|ENSG00000160999.8|SH2B adaptor protein 2
hg19_v2_chr17_+_17991197_17991208	0.275447	SMAD4	ENST00000225729.3|DRG2|ENSG00000108591.5|developmentally regulated GTP binding protein 2
hg19_v2_chr12_-_49449107_49449107	0.275251	SMAD4	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr2_+_234296792_234296806	0.273021	SMAD4	ENST00000409813.3|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa
hg19_v2_chr18_+_18943554_18943587	0.271944	SMAD4	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr3_-_39149082_39149146	0.271697	SMAD4	ENST00000427459.1|GORASP1|ENSG00000114745.9|golgi reassembly stacking protein 1, 65kDa 	ENST00000411813.1|GORASP1|ENSG00000114745.9|golgi reassembly stacking protein 1, 65kDa 	ENST00000422110.2|GORASP1|ENSG00000114745.9|golgi reassembly stacking protein 1, 65kDa 	ENST00000479927.1|GORASP1|ENSG00000114745.9|golgi reassembly stacking protein 1, 65kDa
hg19_v2_chr11_+_3819049_3819202	0.271693	SMAD4	ENST00000396986.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000300730.6|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000532535.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000396993.4|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000396991.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000532523.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000459679.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464261.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464906.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464441.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2
hg19_v2_chr1_-_243418650_243418664	0.271568	SMAD4	ENST00000522995.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr11_-_1776176_1776241	0.27068	SMAD4	ENST00000429746.1|CTSD|ENSG00000117984.8|cathepsin D
hg19_v2_chr8_+_23104130_23104184	0.270671	SMAD4	ENST00000313219.7|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7 	ENST00000519984.1|CHMP7|ENSG00000147457.9|charged multivesicular body protein 7
hg19_v2_chr17_-_56494908_56494949	0.269694	SMAD4	ENST00000577716.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr6_+_30881982_30882080	0.269581	SMAD4	ENST00000321897.5|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000416670.2|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000542001.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000428017.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr1_-_156918806_156918806	0.269141	SMAD4	ENST00000315174.8|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr16_-_28550348_28550495	0.268847	SMAD4	ENST00000324873.6|NUPR1|ENSG00000176046.7|nuclear protein, transcriptional regulator, 1
hg19_v2_chr19_+_51728316_51728376	0.268764	SMAD4	ENST00000436584.2|CD33|ENSG00000105383.10|CD33 molecule 	ENST00000421133.2|CD33|ENSG00000105383.10|CD33 molecule 	ENST00000391796.3|CD33|ENSG00000105383.10|CD33 molecule 	ENST00000262262.4|CD33|ENSG00000105383.10|CD33 molecule
hg19_v2_chr6_-_28220002_28220020	0.268126	SMAD4	ENST00000377294.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr14_+_65171315_65171368	0.268071	SMAD4	ENST00000394691.1|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr11_+_71709938_71710109	0.266272	SMAD4	ENST00000393705.4|IL18BP|ENSG00000137496.13|interleukin 18 binding protein 	ENST00000337131.5|IL18BP|ENSG00000137496.13|interleukin 18 binding protein 	ENST00000531053.1|IL18BP|ENSG00000137496.13|interleukin 18 binding protein 	ENST00000404792.1|IL18BP|ENSG00000137496.13|interleukin 18 binding protein
hg19_v2_chr12_+_7060508_7060609	0.266003	SMAD4	ENST00000541698.1|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6 	ENST00000542462.1|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6
hg19_v2_chrX_-_153602991_153603011	0.265611	SMAD4	ENST00000369850.3|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000422373.1|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr5_+_140593509_140593509	0.265579	SMAD4	ENST00000341948.4|PCDHB13|ENSG00000187372.9|protocadherin beta 13
hg19_v2_chr3_-_9921934_9921940	0.264809	SMAD4	ENST00000423850.1|CIDEC|ENSG00000187288.6|cell death-inducing DFFA-like effector c
hg19_v2_chr16_-_66586365_66586447	0.264539	SMAD4	ENST00000562484.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr19_+_17378278_17378311	0.263702	SMAD4	ENST00000596335.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000601436.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000595632.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1
hg19_v2_chr17_-_66097610_66097638	0.263631	SMAD4	ENST00000584047.1|AC145343.2|ENSG00000265055.1|AC145343.2	ENST00000579629.1|AC145343.2|ENSG00000265055.1|AC145343.2
hg19_v2_chr9_-_140064496_140064510	0.261586	SMAD4	ENST00000371542.3|LRRC26|ENSG00000184709.7|leucine rich repeat containing 26
hg19_v2_chr19_+_17378159_17378275	0.260966	SMAD4	ENST00000598188.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000359435.4|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000599474.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000599057.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000601043.1|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1 	ENST00000447614.2|BABAM1|ENSG00000105393.11|BRISC and BRCA1 A complex member 1
hg19_v2_chr9_-_140196703_140196744	0.260946	SMAD4	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr22_-_33968239_33968252	0.260203	SMAD4	ENST00000452586.2|LARGE|ENSG00000133424.16|like-glycosyltransferase 	ENST00000421768.1|LARGE|ENSG00000133424.16|like-glycosyltransferase
hg19_v2_chr11_-_46638720_46638788	0.260138	SMAD4	ENST00000326737.3|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr22_+_38382163_38382206	0.259732	SMAD4	ENST00000333418.4|POLR2F|ENSG00000100142.10|polymerase (RNA) II (DNA directed) polypeptide F 	ENST00000427034.1|POLR2F|ENSG00000100142.10|polymerase (RNA) II (DNA directed) polypeptide F
hg19_v2_chr19_+_41725140_41725153	0.259547	SMAD4	ENST00000359092.3|AXL|ENSG00000167601.7|AXL receptor tyrosine kinase
hg19_v2_chr16_-_54320675_54320715	0.259241	SMAD4	ENST00000329734.3|IRX3|ENSG00000177508.11|iroquois homeobox 3
hg19_v2_chr6_+_30851205_30851230	0.258601	SMAD4	ENST00000515881.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr22_+_31002990_31003069	0.255745	SMAD4	ENST00000423350.1|TCN2|ENSG00000185339.4|transcobalamin II
hg19_v2_chr2_-_74730087_74730111	0.255323	SMAD4	ENST00000341396.2|LBX2|ENSG00000179528.11|ladybird homeobox 2
hg19_v2_chr19_+_35485682_35485693	0.254759	SMAD4	ENST00000599564.1|GRAMD1A|ENSG00000089351.10|GRAM domain containing 1A
hg19_v2_chr5_+_150404904_150404928	0.2547	SMAD4	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr16_-_71323617_71323632	0.253282	SMAD4	ENST00000563876.1|CMTR2|ENSG00000180917.12|cap methyltransferase 2
hg19_v2_chr5_+_140071178_140071210	0.250654	SMAD4	ENST00000508522.1|HARS2|ENSG00000112855.10|histidyl-tRNA synthetase 2, mitochondrial 	ENST00000448069.2|HARS2|ENSG00000112855.10|histidyl-tRNA synthetase 2, mitochondrial
hg19_v2_chrX_+_38420623_38420774	0.250369	SMAD4	ENST00000378482.2|TSPAN7|ENSG00000156298.8|tetraspanin 7
hg19_v2_chr15_+_45694567_45694626	0.249624	SMAD4	ENST00000559860.1|SPATA5L1|ENSG00000171763.13|spermatogenesis associated 5-like 1
hg19_v2_chr19_-_46105411_46105481	0.249615	SMAD4	ENST00000323040.4|GPR4|ENSG00000177464.4|G protein-coupled receptor 4 	ENST00000544371.1|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr7_-_139727118_139727118	0.249532	SMAD4	ENST00000484111.1|PARP12|ENSG00000059378.8|poly (ADP-ribose) polymerase family, member 12
hg19_v2_chr19_-_17958832_17958861	0.249029	SMAD4	ENST00000458235.1|JAK3|ENSG00000105639.14|Janus kinase 3
hg19_v2_chr2_-_129076151_129076151	0.248805	SMAD4	ENST00000259241.6|HS6ST1|ENSG00000136720.6|heparan sulfate 6-O-sulfotransferase 1
hg19_v2_chr3_+_106959530_106959548	0.248702	SMAD4	ENST00000466734.1|LINC00883|ENSG00000243701.1|long intergenic non-protein coding RNA 883 	ENST00000463143.1|LINC00883|ENSG00000243701.1|long intergenic non-protein coding RNA 883 	ENST00000490441.1|LINC00883|ENSG00000243701.1|long intergenic non-protein coding RNA 883
hg19_v2_chr2_+_27301435_27301496	0.248133	SMAD4	ENST00000380320.4|EMILIN1|ENSG00000138080.9|elastin microfibril interfacer 1
hg19_v2_chr3_-_148939598_148939622	0.247149	SMAD4	ENST00000455472.3|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr16_+_330581_330613	0.246549	SMAD4	ENST00000219409.3|ARHGDIG|ENSG00000242173.4|Rho GDP dissociation inhibitor (GDI) gamma
hg19_v2_chr6_-_32095968_32096032	0.245794	SMAD4	ENST00000375203.3|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta 	ENST00000375201.4|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta
hg19_v2_chr6_+_27215494_27215516	0.245474	SMAD4	ENST00000230582.3|PRSS16|ENSG00000112812.11|protease, serine, 16 (thymus)
hg19_v2_chr3_-_50605150_50605212	0.245346	SMAD4	ENST00000357203.3|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18
hg19_v2_chr11_-_70672645_70672711	0.244604	SMAD4	ENST00000423696.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr19_+_41222998_41223057	0.244384	SMAD4	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr22_-_24241117_24241117	0.243226	SMAD4	ENST00000406213.1|AP000350.4|ENSG00000218537.1|Uncharacterized protein
hg19_v2_chr14_-_21562671_21562702	0.242448	SMAD4	ENST00000554923.1|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr1_-_36022979_36023014	0.242407	SMAD4	ENST00000469892.1|KIAA0319L|ENSG00000142687.13|KIAA0319-like 	ENST00000325722.3|KIAA0319L|ENSG00000142687.13|KIAA0319-like
hg19_v2_chr19_-_2740036_2740150	0.242274	SMAD4	ENST00000586572.1|AC006538.4|ENSG00000267001.1|Uncharacterized protein  	ENST00000269740.4|SLC39A3|ENSG00000141873.6|solute carrier family 39 (zinc transporter), member 3
hg19_v2_chr1_-_149908710_149908794	0.241158	SMAD4	ENST00000439741.2|MTMR11|ENSG00000014914.15|myotubularin related protein 11 	ENST00000361405.6|MTMR11|ENSG00000014914.15|myotubularin related protein 11 	ENST00000406732.3|MTMR11|ENSG00000014914.15|myotubularin related protein 11
hg19_v2_chr1_+_110036699_110036727	0.240178	SMAD4	ENST00000496961.1|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1 	ENST00000533024.1|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1 	ENST00000310611.4|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1 	ENST00000527072.1|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1 	ENST00000420578.2|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1 	ENST00000528785.1|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1
hg19_v2_chr17_-_7991021_7991040	0.240131	SMAD4	ENST00000319144.4|ALOX12B|ENSG00000179477.5|arachidonate 12-lipoxygenase, 12R type
hg19_v2_chr7_+_302918_302918	0.238637	SMAD4	ENST00000599994.1|AC187652.1|ENSG00000269396.1|Protein LOC100996433
hg19_v2_chr19_+_45312347_45312378	0.238112	SMAD4	ENST00000270233.6|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group) 	ENST00000591520.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr17_-_7761172_7761209	0.237579	SMAD4	ENST00000333775.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575771.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr1_+_179050512_179050633	0.237494	SMAD4	ENST00000367627.3|TOR3A|ENSG00000186283.9|torsin family 3, member A
hg19_v2_chr15_+_63682335_63682429	0.237238	SMAD4	ENST00000559379.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1	ENST00000559821.1|RP11-321G12.1|ENSG00000259459.1|RP11-321G12.1
hg19_v2_chr15_+_64428529_64428613	0.236257	SMAD4	ENST00000560861.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr1_+_27668505_27668582	0.236219	SMAD4	ENST00000318074.5|SYTL1|ENSG00000142765.13|synaptotagmin-like 1
hg19_v2_chr1_+_26496362_26496457	0.235291	SMAD4	ENST00000374266.5|ZNF593|ENSG00000142684.7|zinc finger protein 593 	ENST00000270812.5|ZNF593|ENSG00000142684.7|zinc finger protein 593
hg19_v2_chr5_+_85913721_85913790	0.234697	SMAD4	ENST00000247655.3|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000509578.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc 	ENST00000515763.1|COX7C|ENSG00000127184.6|cytochrome c oxidase subunit VIIc
hg19_v2_chr7_-_99332719_99332820	0.233738	SMAD4	ENST00000336374.2|CYP3A7|ENSG00000160870.8|cytochrome P450, family 3, subfamily A, polypeptide 7
hg19_v2_chr12_-_57634475_57634532	0.233345	SMAD4	ENST00000393825.1|NDUFA4L2|ENSG00000185633.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v2_chr1_+_10509971_10510095	0.232464	SMAD4	ENST00000320498.4|CORT|ENSG00000241563.2|cortistatin
hg19_v2_chr7_-_142659388_142659456	0.232354	SMAD4	ENST00000476829.1|KEL|ENSG00000197993.3|Kell blood group, metallo-endopeptidase 	ENST00000467543.1|KEL|ENSG00000197993.3|Kell blood group, metallo-endopeptidase
hg19_v2_chr19_-_51142540_51142572	0.232126	SMAD4	ENST00000598997.1|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr3_+_133524459_133524459	0.231897	SMAD4	ENST00000484684.1|SRPRB|ENSG00000144867.7|signal recognition particle receptor, B subunit
hg19_v2_chr17_+_7761013_7761074	0.231713	SMAD4	ENST00000571846.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr7_-_135612198_135612198	0.231532	SMAD4	ENST00000589735.1|LUZP6|ENSG00000267697.1|leucine zipper protein 6
hg19_v2_chr3_-_50329835_50329897	0.231453	SMAD4	ENST00000429673.2|IFRD2|ENSG00000214706.6|interferon-related developmental regulator 2
hg19_v2_chr12_+_54519842_54519882	0.231098	SMAD4	ENST00000508564.1|RP11-834C11.4|ENSG00000250742.1|RP11-834C11.4
hg19_v2_chr6_+_106988986_106989037	0.229295	SMAD4	ENST00000457437.1|AIM1|ENSG00000112297.10|absent in melanoma 1 	ENST00000535438.1|AIM1|ENSG00000112297.10|absent in melanoma 1
hg19_v2_chr22_-_43567750_43567759	0.229256	SMAD4	ENST00000494035.1|TTLL12|ENSG00000100304.12|tubulin tyrosine ligase-like family, member 12
hg19_v2_chr1_-_33366931_33367007	0.228806	SMAD4	ENST00000373463.3|TMEM54|ENSG00000121900.14|transmembrane protein 54 	ENST00000329151.5|TMEM54|ENSG00000121900.14|transmembrane protein 54
hg19_v2_chr17_+_42264395_42264418	0.228018	SMAD4	ENST00000587989.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000590235.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chrX_+_55026763_55026831	0.227046	SMAD4	ENST00000374987.3|APEX2|ENSG00000169188.4|APEX nuclease (apurinic/apyrimidinic endonuclease) 2
hg19_v2_chr16_+_29991673_29991673	0.226948	SMAD4	ENST00000416441.2|TAOK2|ENSG00000149930.13|TAO kinase 2
hg19_v2_chrX_+_49091920_49091942	0.226246	SMAD4	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr2_-_20850813_20850878	0.225656	SMAD4	ENST00000402541.1|HS1BP3|ENSG00000118960.8|HCLS1 binding protein 3 	ENST00000406618.3|HS1BP3|ENSG00000118960.8|HCLS1 binding protein 3 	ENST00000304031.3|HS1BP3|ENSG00000118960.8|HCLS1 binding protein 3
hg19_v2_chr16_+_1728305_1728324	0.225374	SMAD4	ENST00000569765.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr15_-_74504560_74504574	0.224127	SMAD4	ENST00000449139.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr9_-_140513231_140513337	0.223221	SMAD4	ENST00000371417.3|C9orf37|ENSG00000203993.3|chromosome 9 open reading frame 37
hg19_v2_chr6_-_27100529_27100582	0.223151	SMAD4	ENST00000607124.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000339812.2|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000541790.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj
hg19_v2_chr17_-_73840415_73840499	0.222023	SMAD4	ENST00000592386.1|UNC13D|ENSG00000092929.7|unc-13 homolog D (C. elegans) 	ENST00000412096.2|UNC13D|ENSG00000092929.7|unc-13 homolog D (C. elegans) 	ENST00000586147.1|UNC13D|ENSG00000092929.7|unc-13 homolog D (C. elegans)
hg19_v2_chr6_-_28304152_28304282	0.221062	SMAD4	ENST00000435857.1|ZSCAN31|ENSG00000235109.3|zinc finger and SCAN domain containing 31
hg19_v2_chr15_+_32322709_32322759	0.220201	SMAD4	ENST00000455693.2|CHRNA7|ENSG00000175344.12|cholinergic receptor, nicotinic, alpha 7 (neuronal)
hg19_v2_chr1_-_24126892_24127043	0.22	SMAD4	ENST00000374497.3|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase 	ENST00000425913.1|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase
hg19_v2_chr19_+_49617609_49617681	0.219777	SMAD4	ENST00000221459.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans) 	ENST00000486217.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr15_-_83240507_83240539	0.219752	SMAD4	ENST00000564522.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000398592.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr22_+_31003190_31003208	0.219666	SMAD4	ENST00000407817.3|TCN2|ENSG00000185339.4|transcobalamin II
hg19_v2_chr22_-_37880543_37880667	0.219222	SMAD4	ENST00000442496.1|MFNG|ENSG00000100060.13|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg19_v2_chr17_+_79968655_79968687	0.217824	SMAD4	ENST00000583744.1|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr14_-_24911868_24911902	0.217055	SMAD4	ENST00000554698.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr16_+_66638003_66638244	0.216683	SMAD4	ENST00000562357.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000360086.4|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000562707.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000361909.4|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000460097.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000565666.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3
hg19_v2_chr4_+_169418255_169418278	0.215913	SMAD4	ENST00000505667.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein 	ENST00000511948.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr19_-_42758040_42758064	0.21588	SMAD4	ENST00000593944.1|ERF|ENSG00000105722.5|Ets2 repressor factor
hg19_v2_chr11_+_111411384_111411505	0.215474	SMAD4	ENST00000375615.3|LAYN|ENSG00000204381.7|layilin 	ENST00000525126.1|LAYN|ENSG00000204381.7|layilin 	ENST00000436913.2|LAYN|ENSG00000204381.7|layilin 	ENST00000533265.1|LAYN|ENSG00000204381.7|layilin
hg19_v2_chr11_-_61647935_61648020	0.214557	SMAD4	ENST00000531956.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3
hg19_v2_chr2_-_70944855_70944910	0.21412	SMAD4	ENST00000415348.1|ADD2|ENSG00000075340.18|adducin 2 (beta)
hg19_v2_chr7_+_134551583_134551599	0.213926	SMAD4	ENST00000435928.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr2_-_220252068_220252093	0.213579	SMAD4	ENST00000430206.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase 	ENST00000429013.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase
hg19_v2_chr1_+_1334914_1334972	0.213533	SMAD4	ENST00000576232.1|RP4-758J18.2|ENSG00000224870.3|HCG20425, isoform CRA_a; Uncharacterized protein; cDNA FLJ53815  	ENST00000570344.1|RP4-758J18.2|ENSG00000224870.3|HCG20425, isoform CRA_a; Uncharacterized protein; cDNA FLJ53815
hg19_v2_chr14_-_23446900_23446946	0.213399	SMAD4	ENST00000556731.1|AJUBA|ENSG00000129474.11|ajuba LIM protein
hg19_v2_chr6_+_138725343_138725501	0.213011	SMAD4	ENST00000607197.1|HEBP2|ENSG00000051620.6|heme binding protein 2 	ENST00000367697.3|HEBP2|ENSG00000051620.6|heme binding protein 2
hg19_v2_chrX_-_153599578_153599656	0.21201	SMAD4	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr6_-_169654139_169654139	0.211981	SMAD4	ENST00000366787.3|THBS2|ENSG00000186340.10|thrombospondin 2
hg19_v2_chr17_+_73975292_73975359	0.21131	SMAD4	ENST00000397640.1|TEN1|ENSG00000257949.2|TEN1 CST complex subunit 	ENST00000416485.1|TEN1|ENSG00000257949.2|TEN1 CST complex subunit 	ENST00000588202.1|TEN1|ENSG00000257949.2|TEN1 CST complex subunit 	ENST00000590676.1|TEN1|ENSG00000257949.2|TEN1 CST complex subunit 	ENST00000586891.1|TEN1|ENSG00000257949.2|TEN1 CST complex subunit
hg19_v2_chr17_+_36584662_36584730	0.211154	SMAD4	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr2_-_9563319_9563379	0.210869	SMAD4	ENST00000497105.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000360635.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000359712.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr14_+_69726656_69726686	0.210322	SMAD4	ENST00000337827.4|GALNT16|ENSG00000100626.12|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
hg19_v2_chr19_-_41859814_41859837	0.209751	SMAD4	ENST00000221930.5|TGFB1|ENSG00000105329.5|transforming growth factor, beta 1
hg19_v2_chr16_+_57673430_57673438	0.20929	SMAD4	ENST00000540164.2|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568531.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr19_+_49661037_49661077	0.208814	SMAD4	ENST00000427978.2|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr20_+_48789121_48789137	0.208808	SMAD4	ENST00000411453.1|RP11-112L6.4|ENSG00000231742.1|RP11-112L6.4
hg19_v2_chr1_-_9189229_9189259	0.207681	SMAD4	ENST00000377411.4|GPR157|ENSG00000180758.10|G protein-coupled receptor 157
hg19_v2_chr1_+_156252708_156252744	0.207403	SMAD4	ENST00000295694.5|TMEM79|ENSG00000163472.14|transmembrane protein 79 	ENST00000357501.2|TMEM79|ENSG00000163472.14|transmembrane protein 79
hg19_v2_chr6_+_146864829_146864881	0.206742	SMAD4	ENST00000367495.3|RAB32|ENSG00000118508.4|RAB32, member RAS oncogene family
hg19_v2_chrX_+_38420783_38420805	0.206351	SMAD4	ENST00000422612.2|TSPAN7|ENSG00000156298.8|tetraspanin 7 	ENST00000286824.6|TSPAN7|ENSG00000156298.8|tetraspanin 7 	ENST00000545599.1|TSPAN7|ENSG00000156298.8|tetraspanin 7
hg19_v2_chr19_+_35739597_35739627	0.206211	SMAD4	ENST00000361790.3|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor
hg19_v2_chr11_+_1411129_1411197	0.204308	SMAD4	ENST00000308219.9|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2 	ENST00000528841.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2 	ENST00000531197.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2 	ENST00000308230.5|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr2_+_173686303_173686325	0.203844	SMAD4	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr2_-_109605663_109605828	0.203546	SMAD4	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr1_-_866445_866445	0.203079	SMAD4	ENST00000598827.1|AL645608.1|ENSG00000268179.1|Uncharacterized protein
hg19_v2_chr4_-_38666430_38666526	0.201253	SMAD4	ENST00000436901.1|AC021860.1|ENSG00000196355.2|Uncharacterized protein
hg19_v2_chr16_+_22524844_22525003	0.20074	SMAD4	ENST00000538606.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000424340.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000517539.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000528249.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chrX_+_54834791_54834832	0.200599	SMAD4	ENST00000218439.4|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375058.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375060.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
hg19_v2_chr1_+_17866290_17866330	0.200416	SMAD4	ENST00000361221.3|ARHGEF10L|ENSG00000074964.12|Rho guanine nucleotide exchange factor (GEF) 10-like 	ENST00000452522.1|ARHGEF10L|ENSG00000074964.12|Rho guanine nucleotide exchange factor (GEF) 10-like 	ENST00000434513.1|ARHGEF10L|ENSG00000074964.12|Rho guanine nucleotide exchange factor (GEF) 10-like
hg19_v2_chr22_-_45608237_45608298	0.200116	SMAD4	ENST00000492273.1|KIAA0930|ENSG00000100364.14|KIAA0930
hg19_v2_chr20_+_34680698_34680759	0.198961	SMAD4	ENST00000447825.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr19_+_45312310_45312332	0.198464	SMAD4	ENST00000589651.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr6_+_27100811_27100832	0.197998	SMAD4	ENST00000359193.2|HIST1H2AG|ENSG00000196787.2|histone cluster 1, H2ag
hg19_v2_chr9_+_135754263_135754338	0.197793	SMAD4	ENST00000356311.5|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9 	ENST00000350499.6|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9
hg19_v2_chr9_+_35673853_35673905	0.197714	SMAD4	ENST00000378357.4|CA9|ENSG00000107159.8|carbonic anhydrase IX
hg19_v2_chr17_-_43487741_43487772	0.197412	SMAD4	ENST00000455881.1|ARHGAP27|ENSG00000159314.7|Rho GTPase activating protein 27
hg19_v2_chr17_+_38474489_38474548	0.197276	SMAD4	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr19_+_36266417_36266427	0.19652	SMAD4	ENST00000378944.5|ARHGAP33|ENSG00000004777.14|Rho GTPase activating protein 33 	ENST00000007510.4|ARHGAP33|ENSG00000004777.14|Rho GTPase activating protein 33
hg19_v2_chr1_-_153538292_153538342	0.196432	SMAD4	ENST00000497140.1|S100A2|ENSG00000196754.6|S100 calcium binding protein A2 	ENST00000368708.3|S100A2|ENSG00000196754.6|S100 calcium binding protein A2
hg19_v2_chr3_-_120365866_120365899	0.196242	SMAD4	ENST00000475447.2|HGD|ENSG00000113924.7|homogentisate 1,2-dioxygenase
hg19_v2_chr8_+_145294015_145294015	0.19618	SMAD4	ENST00000544576.1|MROH1|ENSG00000179832.13|maestro heat-like repeat family member 1
hg19_v2_chr3_+_9834179_9834223	0.196094	SMAD4	ENST00000498623.2|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr19_+_38755042_38755098	0.195135	SMAD4	ENST00000301244.7|SPINT2|ENSG00000167642.8|serine peptidase inhibitor, Kunitz type, 2
hg19_v2_chr20_+_30193083_30193098	0.194912	SMAD4	ENST00000376112.3|ID1|ENSG00000125968.7|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 	ENST00000376105.3|ID1|ENSG00000125968.7|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
hg19_v2_chr6_-_32731299_32731316	0.194057	SMAD4	ENST00000435145.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000437316.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr13_-_45151259_45151326	0.19377	SMAD4	ENST00000493016.1|TSC22D1|ENSG00000102804.10|TSC22 domain family, member 1
hg19_v2_chrX_-_51812268_51812368	0.19354	SMAD4	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr14_-_105444694_105444718	0.193438	SMAD4	ENST00000333244.5|AHNAK2|ENSG00000185567.6|AHNAK nucleoprotein 2
hg19_v2_chr2_-_219151487_219151572	0.193046	SMAD4	ENST00000444881.1|TMBIM1|ENSG00000135926.8|transmembrane BAX inhibitor motif containing 1
hg19_v2_chr19_+_54371114_54371180	0.192728	SMAD4	ENST00000448420.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000439000.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391770.4|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391771.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker
hg19_v2_chrY_-_15591818_15591919	0.192594	SMAD4	ENST00000382893.1|UTY|ENSG00000183878.11|ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
hg19_v2_chr11_+_10326918_10326933	0.192508	SMAD4	ENST00000528544.1|ADM|ENSG00000148926.5|adrenomedullin
hg19_v2_chr12_-_48213568_48213695	0.192373	SMAD4	ENST00000080059.7|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000354334.3|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000430670.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000552960.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000440293.1|HDAC7|ENSG00000061273.13|histone deacetylase 7
hg19_v2_chr3_+_184056614_184056641	0.192365	SMAD4	ENST00000453072.1|FAM131A|ENSG00000175182.9|family with sequence similarity 131, member A
hg19_v2_chr19_+_38755203_38755228	0.192179	SMAD4	ENST00000587090.1|SPINT2|ENSG00000167642.8|serine peptidase inhibitor, Kunitz type, 2 	ENST00000454580.3|SPINT2|ENSG00000167642.8|serine peptidase inhibitor, Kunitz type, 2
hg19_v2_chr1_+_24117662_24117682	0.191887	SMAD4	ENST00000420982.1|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374505.2|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr8_+_118533049_118533074	0.191342	SMAD4	ENST00000522839.1|MED30|ENSG00000164758.3|mediator complex subunit 30
hg19_v2_chr9_-_77567743_77567817	0.190284	SMAD4	ENST00000376854.5|C9orf40|ENSG00000135045.6|chromosome 9 open reading frame 40
hg19_v2_chr20_+_43343517_43343580	0.190099	SMAD4	ENST00000372865.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr16_+_68877496_68877521	0.18862	SMAD4	ENST00000261778.1|TANGO6|ENSG00000103047.3|transport and golgi organization 6 homolog (Drosophila)
hg19_v2_chr6_-_138539627_138539627	0.188477	SMAD4	ENST00000527246.2|PBOV1|ENSG00000254440.2|prostate and breast cancer overexpressed 1
hg19_v2_chr13_+_21750780_21750843	0.188302	SMAD4	ENST00000309594.4|MRP63|ENSG00000173141.4|mitochondrial ribosomal protein 63
hg19_v2_chr2_+_168725458_168725458	0.18818	SMAD4	ENST00000392690.3|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr3_-_38992052_38992052	0.187527	SMAD4	ENST00000302328.3|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000450244.1|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000444237.2|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v2_chr11_+_124492749_124492795	0.187509	SMAD4	ENST00000531667.1|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1 	ENST00000441174.3|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1 	ENST00000375005.4|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1
hg19_v2_chr12_+_116997186_116997186	0.187482	SMAD4	ENST00000306985.4|MAP1LC3B2|ENSG00000171471.5|microtubule-associated protein 1 light chain 3 beta 2
hg19_v2_chr16_+_57847684_57847684	0.187291	SMAD4	ENST00000335616.2|CTD-2600O9.1|ENSG00000187185.3|uncharacterized protein LOC388282
hg19_v2_chr15_-_88795835_88795853	0.186516	SMAD4	ENST00000559188.1|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3
hg19_v2_chr12_-_123565834_123565880	0.186428	SMAD4	ENST00000546049.1|PITPNM2|ENSG00000090975.8|phosphatidylinositol transfer protein, membrane-associated 2
hg19_v2_chr22_+_31002779_31002830	0.186338	SMAD4	ENST00000215838.3|TCN2|ENSG00000185339.4|transcobalamin II
hg19_v2_chr19_-_10628098_10628109	0.185569	SMAD4	ENST00000590601.1|S1PR5|ENSG00000180739.12|sphingosine-1-phosphate receptor 5
hg19_v2_chr14_+_101359265_101359265	0.184351	SMAD4	ENST00000599197.1|AL117190.3|ENSG00000269375.1|Esophagus cancer-related gene-2 interaction susceptibility protein; Uncharacterized protein
hg19_v2_chr8_-_30013748_30013786	0.18402	SMAD4	ENST00000607315.1|RP11-51J9.5|ENSG00000271869.1|RP11-51J9.5
hg19_v2_chr5_+_127039075_127039098	0.183899	SMAD4	ENST00000514853.2|CTC-228N24.1|ENSG00000230561.3|CTC-228N24.1
hg19_v2_chr22_-_30953587_30953717	0.183734	SMAD4	ENST00000453479.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chr5_+_36152091_36152114	0.183156	SMAD4	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chrX_+_67718863_67718906	0.182257	SMAD4	ENST00000374622.2|YIPF6|ENSG00000181704.7|Yip1 domain family, member 6
hg19_v2_chr22_-_50689786_50689827	0.182155	SMAD4	ENST00000216271.5|HDAC10|ENSG00000100429.13|histone deacetylase 10
hg19_v2_chr22_+_31003133_31003139	0.181323	SMAD4	ENST00000405742.3|TCN2|ENSG00000185339.4|transcobalamin II
hg19_v2_chr17_-_26733604_26733648	0.180671	SMAD4	ENST00000584426.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000584995.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr3_-_45017609_45017687	0.180652	SMAD4	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr19_+_44331555_44331581	0.180586	SMAD4	ENST00000590950.1|ZNF283|ENSG00000167637.12|zinc finger protein 283
hg19_v2_chr9_+_140145713_140145765	0.180541	SMAD4	ENST00000388931.3|C9orf173|ENSG00000197768.6|chromosome 9 open reading frame 173 	ENST00000412566.1|C9orf173|ENSG00000197768.6|chromosome 9 open reading frame 173
hg19_v2_chr22_+_39052632_39052692	0.180539	SMAD4	ENST00000411557.1|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000396811.2|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000216029.3|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000416285.1|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila)
hg19_v2_chr9_+_34990219_34990312	0.180536	SMAD4	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr5_+_125758813_125758845	0.179046	SMAD4	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr22_+_38453378_38453436	0.178686	SMAD4	ENST00000437453.1|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1 	ENST00000356976.3|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1
hg19_v2_chr3_-_149510553_149510610	0.178539	SMAD4	ENST00000462519.2|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000446160.1|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000383050.3|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1
hg19_v2_chrX_+_9502971_9502984	0.176368	SMAD4	ENST00000452824.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr14_-_23426337_23426370	0.176266	SMAD4	ENST00000342454.8|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000555986.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000541587.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000554516.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000347758.2|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000206474.7|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000555040.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4
hg19_v2_chr15_-_45480147_45480150	0.175918	SMAD4	ENST00000560734.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr19_+_35739782_35739882	0.175422	SMAD4	ENST00000347609.4|LSR|ENSG00000105699.12|lipolysis stimulated lipoprotein receptor
hg19_v2_chr14_+_20215587_20215587	0.175415	SMAD4	ENST00000331723.1|OR4Q3|ENSG00000182652.1|olfactory receptor, family 4, subfamily Q, member 3
hg19_v2_chr14_-_54955376_54955522	0.175197	SMAD4	ENST00000553333.1|GMFB|ENSG00000197045.8|glia maturation factor, beta
hg19_v2_chr16_-_29517141_29517141	0.174438	SMAD4	ENST00000550665.1|RP11-231C14.4|ENSG00000169203.12|Uncharacterized protein
hg19_v2_chr16_+_67022633_67022676	0.174173	SMAD4	ENST00000398354.1|CES4A|ENSG00000172824.10|carboxylesterase 4A 	ENST00000326686.5|CES4A|ENSG00000172824.10|carboxylesterase 4A
hg19_v2_chrX_+_52920336_52920336	0.173958	SMAD4	ENST00000452154.2|FAM156B|ENSG00000179304.12|family with sequence similarity 156, member B
hg19_v2_chr14_-_24732738_24732753	0.173652	SMAD4	ENST00000558074.1|TGM1|ENSG00000092295.7|transglutaminase 1 	ENST00000560226.1|TGM1|ENSG00000092295.7|transglutaminase 1
hg19_v2_chr1_-_183538319_183538365	0.17109	SMAD4	ENST00000420553.1|NCF2|ENSG00000116701.10|neutrophil cytosolic factor 2 	ENST00000419402.1|NCF2|ENSG00000116701.10|neutrophil cytosolic factor 2
hg19_v2_chr15_+_32322685_32322701	0.170616	SMAD4	ENST00000454250.3|CHRNA7|ENSG00000175344.12|cholinergic receptor, nicotinic, alpha 7 (neuronal) 	ENST00000306901.3|CHRNA7|ENSG00000175344.12|cholinergic receptor, nicotinic, alpha 7 (neuronal)
hg19_v2_chr5_-_93954227_93954321	0.170542	SMAD4	ENST00000513200.3|KIAA0825|ENSG00000185261.9|KIAA0825 	ENST00000329378.7|KIAA0825|ENSG00000185261.9|KIAA0825 	ENST00000312498.7|KIAA0825|ENSG00000185261.9|KIAA0825
hg19_v2_chr17_+_39405939_39405939	0.170136	SMAD4	ENST00000334109.2|KRTAP9-4|ENSG00000241595.1|keratin associated protein 9-4
hg19_v2_chr16_-_19896220_19896239	0.16937	SMAD4	ENST00000562469.1|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B 	ENST00000300571.2|GPRC5B|ENSG00000167191.7|G protein-coupled receptor, family C, group 5, member B
hg19_v2_chr17_+_74381343_74381386	0.169227	SMAD4	ENST00000392496.3|SPHK1|ENSG00000176170.9|sphingosine kinase 1
hg19_v2_chr10_-_49860525_49860661	0.168922	SMAD4	ENST00000435790.2|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr9_-_131644306_131644368	0.168867	SMAD4	ENST00000302586.3|CCBL1|ENSG00000171097.9|cysteine conjugate-beta lyase, cytoplasmic
hg19_v2_chr17_+_17991218_17991321	0.16875	SMAD4	ENST00000395726.4|DRG2|ENSG00000108591.5|developmentally regulated GTP binding protein 2 	ENST00000579601.1|DRG2|ENSG00000108591.5|developmentally regulated GTP binding protein 2 	ENST00000580929.1|DRG2|ENSG00000108591.5|developmentally regulated GTP binding protein 2 	ENST00000583355.1|DRG2|ENSG00000108591.5|developmentally regulated GTP binding protein 2
hg19_v2_chr17_-_3796334_3796399	0.167681	SMAD4	ENST00000381771.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha 	ENST00000348335.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha 	ENST00000158166.5|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr9_-_130616915_130616944	0.167397	SMAD4	ENST00000344849.3|ENG|ENSG00000106991.9|endoglin
hg19_v2_chr12_-_6960407_6960464	0.166804	SMAD4	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr1_+_44412577_44412664	0.166046	SMAD4	ENST00000372343.3|IPO13|ENSG00000117408.6|importin 13
hg19_v2_chr1_+_6684918_6684936	0.166007	SMAD4	ENST00000054650.4|THAP3|ENSG00000041988.11|THAP domain containing, apoptosis associated protein 3
hg19_v2_chr3_-_10052763_10052816	0.164601	SMAD4	ENST00000383808.2|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000426698.1|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000470827.2|EMC3|ENSG00000125037.8|ER membrane protein complex subunit 3
hg19_v2_chr3_+_160559931_160560015	0.163907	SMAD4	ENST00000464260.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L 	ENST00000295839.9|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr8_-_22550815_22550844	0.162895	SMAD4	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr10_+_67330096_67330300	0.162814	SMAD4	ENST00000433152.4|RP11-222A11.1|ENSG00000228065.6|RP11-222A11.1	ENST00000601979.1|RP11-222A11.1|ENSG00000228065.6|RP11-222A11.1	ENST00000599409.1|RP11-222A11.1|ENSG00000228065.6|RP11-222A11.1	ENST00000608678.1|RP11-222A11.1|ENSG00000228065.6|RP11-222A11.1
hg19_v2_chr18_-_53253112_53253199	0.162803	SMAD4	ENST00000568673.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000562847.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000568147.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr7_+_139528952_139529038	0.162579	SMAD4	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr2_+_71127699_71127744	0.162539	SMAD4	ENST00000234392.2|VAX2|ENSG00000116035.2|ventral anterior homeobox 2
hg19_v2_chr1_+_11751748_11751798	0.162519	SMAD4	ENST00000294485.5|DRAXIN|ENSG00000162490.6|dorsal inhibitory axon guidance protein
hg19_v2_chr1_-_11865982_11866005	0.162166	SMAD4	ENST00000418034.1|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr5_-_138534071_138534087	0.162067	SMAD4	ENST00000394817.2|SIL1|ENSG00000120725.8|SIL1 nucleotide exchange factor
hg19_v2_chr2_-_219524193_219524263	0.161796	SMAD4	ENST00000450560.1|ZNF142|ENSG00000115568.11|zinc finger protein 142 	ENST00000449707.1|ZNF142|ENSG00000115568.11|zinc finger protein 142 	ENST00000432460.1|ZNF142|ENSG00000115568.11|zinc finger protein 142 	ENST00000411696.2|ZNF142|ENSG00000115568.11|zinc finger protein 142
hg19_v2_chr16_-_30597000_30597092	0.161547	SMAD4	ENST00000470110.1|ZNF785|ENSG00000197162.8|zinc finger protein 785 	ENST00000395216.2|ZNF785|ENSG00000197162.8|zinc finger protein 785
hg19_v2_chr9_+_129376722_129376748	0.161129	SMAD4	ENST00000526117.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000373474.4|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000355497.5|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000425646.2|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000561065.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta
hg19_v2_chr17_-_56494713_56494851	0.161	SMAD4	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr12_+_65563329_65563373	0.160936	SMAD4	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr19_-_43835582_43835645	0.16062	SMAD4	ENST00000595748.1|CTC-490G23.2|ENSG00000231412.2|CTC-490G23.2
hg19_v2_chr19_+_50183032_50183150	0.160577	SMAD4	ENST00000527412.1|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr14_-_91720224_91720378	0.160453	SMAD4	ENST00000238699.3|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000531499.2|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr16_+_23690138_23690158	0.160374	SMAD4	ENST00000300093.4|PLK1|ENSG00000166851.10|polo-like kinase 1
hg19_v2_chrX_-_53461305_53461328	0.160015	SMAD4	ENST00000168216.6|HSD17B10|ENSG00000072506.8|hydroxysteroid (17-beta) dehydrogenase 10
hg19_v2_chr3_+_125694347_125694467	0.159376	SMAD4	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr4_-_100242549_100242564	0.158505	SMAD4	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr20_+_42984330_42984445	0.158166	SMAD4	ENST00000316673.4|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000609795.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000457232.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000609262.1|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha
hg19_v2_chr11_-_117186946_117186981	0.157745	SMAD4	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr19_+_3708376_3708501	0.157615	SMAD4	ENST00000539908.2|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr13_+_88325498_88325498	0.157578	SMAD4	ENST00000400028.3|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr12_+_56521840_56521995	0.157567	SMAD4	ENST00000394048.5|ESYT1|ENSG00000139641.8|extended synaptotagmin-like protein 1
hg19_v2_chr9_-_136039314_136039369	0.156002	SMAD4	ENST00000372040.3|GBGT1|ENSG00000148288.7|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
hg19_v2_chr7_-_100425112_100425121	0.155469	SMAD4	ENST00000358173.3|EPHB4|ENSG00000196411.5|EPH receptor B4
hg19_v2_chr2_-_208030886_208030917	0.155307	SMAD4	ENST00000426163.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr11_-_57479673_57479698	0.155162	SMAD4	ENST00000337672.2|MED19|ENSG00000156603.10|mediator complex subunit 19 	ENST00000431606.2|MED19|ENSG00000156603.10|mediator complex subunit 19
hg19_v2_chr10_-_73848531_73848564	0.155157	SMAD4	ENST00000373109.2|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chr7_+_75024903_75025030	0.155002	SMAD4	ENST00000323819.3|TRIM73|ENSG00000178809.7|tripartite motif containing 73 	ENST00000430211.1|TRIM73|ENSG00000178809.7|tripartite motif containing 73
hg19_v2_chr11_-_3186494_3186545	0.154653	SMAD4	ENST00000389989.3|OSBPL5|ENSG00000021762.15|oxysterol binding protein-like 5 	ENST00000542243.1|OSBPL5|ENSG00000021762.15|oxysterol binding protein-like 5
hg19_v2_chr17_-_1531635_1531725	0.154176	SMAD4	ENST00000571650.1|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr20_+_1875110_1875154	0.153363	SMAD4	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr16_-_29415350_29415350	0.152288	SMAD4	ENST00000524087.1|NPIPB11|ENSG00000254206.1|nuclear pore complex interacting protein family, member B11
hg19_v2_chr14_-_65409502_65409531	0.152225	SMAD4	ENST00000389614.5|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr5_-_111093081_111093111	0.15181	SMAD4	ENST00000453526.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000509427.1|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr2_+_239756671_239756732	0.151733	SMAD4	ENST00000448943.2|TWIST2|ENSG00000233608.2|twist family bHLH transcription factor 2
hg19_v2_chr2_+_217082311_217082461	0.151355	SMAD4	ENST00000597904.1|RP11-566E18.3|ENSG00000260804.2|RP11-566E18.3
hg19_v2_chrX_-_33146477_33146521	0.151275	SMAD4	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr19_+_13080296_13080395	0.151117	SMAD4	ENST00000317060.2|DAND5|ENSG00000179284.4|DAN domain family member 5, BMP antagonist
hg19_v2_chr19_+_38755237_38755321	0.151073	SMAD4	ENST00000587516.1|SPINT2|ENSG00000167642.8|serine peptidase inhibitor, Kunitz type, 2
hg19_v2_chr9_+_124030338_124030481	0.150342	SMAD4	ENST00000449773.1|GSN|ENSG00000148180.12|gelsolin 	ENST00000432226.1|GSN|ENSG00000148180.12|gelsolin 	ENST00000436847.1|GSN|ENSG00000148180.12|gelsolin 	ENST00000394353.2|GSN|ENSG00000148180.12|gelsolin 	ENST00000449733.1|GSN|ENSG00000148180.12|gelsolin 	ENST00000412819.1|GSN|ENSG00000148180.12|gelsolin 	ENST00000341272.2|GSN|ENSG00000148180.12|gelsolin 	ENST00000373808.2|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr16_-_17564738_17564834	0.149797	SMAD4	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr12_-_54778444_54778457	0.149638	SMAD4	ENST00000551771.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr17_-_1090599_1090620	0.148789	SMAD4	ENST00000544583.2|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr12_+_122242597_122242638	0.147974	SMAD4	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr12_-_54813229_54813273	0.147702	SMAD4	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr12_+_11081828_11081843	0.147278	SMAD4	ENST00000381847.3|PRH2|ENSG00000134551.8|proline-rich protein HaeIII subfamily 2 	ENST00000396400.3|PRH2|ENSG00000134551.8|proline-rich protein HaeIII subfamily 2
hg19_v2_chr21_+_45725050_45725211	0.1468	SMAD4	ENST00000403390.1|PFKL|ENSG00000141959.12|phosphofructokinase, liver
hg19_v2_chr22_-_26875345_26875357	0.14649	SMAD4	ENST00000398141.1|HPS4|ENSG00000100099.16|Hermansky-Pudlak syndrome 4
hg19_v2_chr6_-_110736742_110736782	0.146389	SMAD4	ENST00000368924.3|DDO|ENSG00000203797.5|D-aspartate oxidase 	ENST00000368923.3|DDO|ENSG00000203797.5|D-aspartate oxidase
hg19_v2_chr9_+_140122018_140122018	0.14628	SMAD4	ENST00000445101.2|RNF224|ENSG00000233198.2|ring finger protein 224
hg19_v2_chr7_+_48128194_48128258	0.146263	SMAD4	ENST00000416681.1|UPP1|ENSG00000183696.9|uridine phosphorylase 1 	ENST00000331803.4|UPP1|ENSG00000183696.9|uridine phosphorylase 1 	ENST00000432131.1|UPP1|ENSG00000183696.9|uridine phosphorylase 1
hg19_v2_chr21_+_45366811_45366887	0.145851	SMAD4	ENST00000398058.1|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3 	ENST00000457068.1|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3 	ENST00000448845.1|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chr12_+_52203789_52203789	0.145447	SMAD4	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr12_-_54071181_54071185	0.14544	SMAD4	ENST00000338662.5|ATP5G2|ENSG00000135390.13|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg19_v2_chr5_+_66254698_66254885	0.145217	SMAD4	ENST00000405643.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000407621.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000432426.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr2_-_208030647_208030689	0.145078	SMAD4	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr18_-_53253323_53253359	0.144886	SMAD4	ENST00000540999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000563888.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr10_+_81462983_81463035	0.144668	SMAD4	ENST00000448135.1|NUTM2B|ENSG00000188199.6|NUT family member 2B 	ENST00000429828.1|NUTM2B|ENSG00000188199.6|NUT family member 2B 	ENST00000372321.1|NUTM2B|ENSG00000188199.6|NUT family member 2B
hg19_v2_chr9_-_139343294_139343294	0.144592	SMAD4	ENST00000313084.5|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr4_+_185734773_185734848	0.143978	SMAD4	ENST00000508020.1|RP11-701P16.2|ENSG00000251139.1|Uncharacterized protein
hg19_v2_chr22_-_24641027_24641110	0.143457	SMAD4	ENST00000398292.3|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5 	ENST00000263112.7|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5 	ENST00000418439.2|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5 	ENST00000424217.1|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5 	ENST00000327365.4|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5
hg19_v2_chr9_+_21409146_21409146	0.142238	SMAD4	ENST00000380205.1|IFNA8|ENSG00000120242.3|interferon, alpha 8
hg19_v2_chr15_+_91411810_91411828	0.141853	SMAD4	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr17_-_18585541_18585572	0.141657	SMAD4	ENST00000285274.5|ZNF286B|ENSG00000249459.4|zinc finger protein 286B 	ENST00000545289.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B 	ENST00000580145.1|ZNF286B|ENSG00000249459.4|zinc finger protein 286B
hg19_v2_chr4_-_102267953_102268104	0.141236	SMAD4	ENST00000523694.2|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000507176.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr16_+_67022582_67022607	0.141235	SMAD4	ENST00000541479.1|CES4A|ENSG00000172824.10|carboxylesterase 4A 	ENST00000338718.4|CES4A|ENSG00000172824.10|carboxylesterase 4A
hg19_v2_chr6_-_138428613_138428648	0.14057	SMAD4	ENST00000421351.3|PERP|ENSG00000112378.11|PERP, TP53 apoptosis effector
hg19_v2_chr3_-_8686479_8686486	0.140564	SMAD4	ENST00000544814.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans) 	ENST00000427408.1|SSUH2|ENSG00000125046.10|ssu-2 homolog (C. elegans)
hg19_v2_chr5_+_125758865_125758876	0.13972	SMAD4	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr8_+_123793633_123793703	0.139706	SMAD4	ENST00000314393.4|ZHX2|ENSG00000178764.6|zinc fingers and homeoboxes 2
hg19_v2_chr6_-_43027105_43027183	0.139553	SMAD4	ENST00000230413.5|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000487429.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000489623.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000468957.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2
hg19_v2_chr1_+_61548225_61548299	0.139166	SMAD4	ENST00000371187.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr9_+_134103496_134103681	0.138905	SMAD4	ENST00000498010.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa 	ENST00000476004.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa 	ENST00000528406.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr12_+_47473369_47473438	0.138647	SMAD4	ENST00000546455.1|PCED1B|ENSG00000179715.8|PC-esterase domain containing 1B
hg19_v2_chr2_-_237150258_237150258	0.13854	SMAD4	ENST00000330842.6|ASB18|ENSG00000182177.9|ankyrin repeat and SOCS box containing 18
hg19_v2_chr17_-_33448468_33448513	0.138486	SMAD4	ENST00000591723.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein  	ENST00000587405.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000593039.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein
hg19_v2_chr16_-_21868978_21868983	0.138046	SMAD4	ENST00000357370.5|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4 	ENST00000451409.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4 	ENST00000341400.7|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4 	ENST00000518761.4|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chrX_-_74145273_74145319	0.13768	SMAD4	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr14_+_97925151_97925207	0.136102	SMAD4	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr19_-_18433910_18434084	0.135805	SMAD4	ENST00000594828.3|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000593829.1|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr5_+_156696362_156696374	0.135449	SMAD4	ENST00000377576.3|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr11_-_64612041_64612116	0.134998	SMAD4	ENST00000342711.5|CDC42BPG|ENSG00000171219.8|CDC42 binding protein kinase gamma (DMPK-like)
hg19_v2_chr11_+_57531292_57531325	0.133758	SMAD4	ENST00000524579.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr11_-_33913708_33913836	0.133695	SMAD4	ENST00000257818.2|LMO2|ENSG00000135363.7|LIM domain only 2 (rhombotin-like 1)
hg19_v2_chr6_-_47009996_47010035	0.133646	SMAD4	ENST00000371243.2|GPR110|ENSG00000153292.11|G protein-coupled receptor 110
hg19_v2_chr8_-_128231299_128231352	0.132049	SMAD4	ENST00000500112.1|CCAT1|ENSG00000247844.1|colon cancer associated transcript 1 (non-protein coding)
hg19_v2_chr5_+_148442844_148442880	0.131638	SMAD4	ENST00000515519.1|CTC-529P8.1|ENSG00000250072.1|CTC-529P8.1
hg19_v2_chr19_-_7694417_7694459	0.131488	SMAD4	ENST00000358368.4|XAB2|ENSG00000076924.7|XPA binding protein 2 	ENST00000534844.1|XAB2|ENSG00000076924.7|XPA binding protein 2
hg19_v2_chr2_-_166060552_166060566	0.13112	SMAD4	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr9_+_111624577_111624603	0.130848	SMAD4	ENST00000333999.3|ACTL7A|ENSG00000187003.5|actin-like 7A
hg19_v2_chr11_-_1507965_1507986	0.130571	SMAD4	ENST00000329957.6|MOB2|ENSG00000182208.8|MOB kinase activator 2
hg19_v2_chr17_-_16472483_16472533	0.130471	SMAD4	ENST00000395824.1|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000448349.2|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000395825.3|ZNF287|ENSG00000141040.10|zinc finger protein 287
hg19_v2_chr22_-_41864662_41864729	0.129714	SMAD4	ENST00000216252.3|PHF5A|ENSG00000100410.3|PHD finger protein 5A
hg19_v2_chr15_-_72668185_72668373	0.12953	SMAD4	ENST00000457859.2|HEXA|ENSG00000213614.5|hexosaminidase A (alpha polypeptide) 	ENST00000566304.1|HEXA|ENSG00000213614.5|hexosaminidase A (alpha polypeptide) 	ENST00000567159.1|HEXA|ENSG00000213614.5|hexosaminidase A (alpha polypeptide) 	ENST00000429918.2|HEXA|ENSG00000213614.5|hexosaminidase A (alpha polypeptide)
hg19_v2_chr12_-_6961050_6961230	0.128641	SMAD4	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr22_+_38453207_38453301	0.128532	SMAD4	ENST00000404072.3|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1 	ENST00000424694.1|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1
hg19_v2_chr14_+_96722539_96722555	0.128144	SMAD4	ENST00000553356.1|BDKRB1|ENSG00000100739.6|bradykinin receptor B1
hg19_v2_chrX_+_49019061_49019228	0.127721	SMAD4	ENST00000376339.1|MAGIX|ENSG00000017621.11|MAGI family member, X-linked 	ENST00000425661.2|MAGIX|ENSG00000017621.11|MAGI family member, X-linked 	ENST00000458388.1|MAGIX|ENSG00000017621.11|MAGI family member, X-linked 	ENST00000412696.2|MAGIX|ENSG00000017621.11|MAGI family member, X-linked
hg19_v2_chr19_+_17516531_17516587	0.127648	SMAD4	ENST00000528911.1|MVB12A|ENSG00000141971.8|multivesicular body subunit 12A 	ENST00000595892.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000528604.1|MVB12A|ENSG00000141971.8|multivesicular body subunit 12A 	ENST00000500836.2|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000598546.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000600369.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000598356.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000594426.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9
hg19_v2_chr1_+_24117693_24117717	0.127465	SMAD4	ENST00000374503.3|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374502.3|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr1_+_61869748_61869782	0.126767	SMAD4	ENST00000357977.5|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr11_+_28131821_28131869	0.126632	SMAD4	ENST00000379199.2|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000303459.6|METTL15|ENSG00000169519.15|methyltransferase like 15
hg19_v2_chr7_+_101928380_101928413	0.126585	SMAD4	ENST00000536178.1|SH2B2|ENSG00000160999.8|SH2B adaptor protein 2
hg19_v2_chr7_+_1022973_1022994	0.125779	SMAD4	ENST00000340150.6|CYP2W1|ENSG00000073067.9|cytochrome P450, family 2, subfamily W, polypeptide 1
hg19_v2_chr17_+_78193443_78193498	0.125477	SMAD4	ENST00000577155.1|SLC26A11|ENSG00000181045.10|solute carrier family 26 (anion exchanger), member 11
hg19_v2_chr22_+_21737663_21737663	0.125307	SMAD4	ENST00000434111.1|RIMBP3B|ENSG00000196934.3|RIMS binding protein 3B
hg19_v2_chr20_+_34680620_34680655	0.125214	SMAD4	ENST00000430276.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000373950.2|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000452261.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr10_-_102890883_102890902	0.124845	SMAD4	ENST00000445873.1|TLX1NB|ENSG00000236311.2|TLX1 neighbor
hg19_v2_chr17_+_74372662_74372742	0.123974	SMAD4	ENST00000591651.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1 	ENST00000545180.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1
hg19_v2_chr22_+_30752963_30753020	0.123881	SMAD4	ENST00000445005.1|CCDC157|ENSG00000187860.6|coiled-coil domain containing 157 	ENST00000430839.1|CCDC157|ENSG00000187860.6|coiled-coil domain containing 157
hg19_v2_chr11_-_64851496_64851623	0.122687	SMAD4	ENST00000404147.3|CDCA5|ENSG00000146670.5|cell division cycle associated 5 	ENST00000275517.3|CDCA5|ENSG00000146670.5|cell division cycle associated 5
hg19_v2_chr20_+_48789087_48789119	0.122501	SMAD4	ENST00000427333.1|RP11-112L6.4|ENSG00000231742.1|RP11-112L6.4
hg19_v2_chr11_+_46366799_46366832	0.122258	SMAD4	ENST00000532868.2|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr11_-_67418120_67418138	0.121934	SMAD4	ENST00000255082.3|ACY3|ENSG00000132744.3|aspartoacylase (aminocyclase) 3
hg19_v2_chr2_-_9563575_9563681	0.121742	SMAD4	ENST00000488451.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000238091.4|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000355346.4|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr6_+_27215471_27215486	0.120887	SMAD4	ENST00000421826.2|PRSS16|ENSG00000112812.11|protease, serine, 16 (thymus)
hg19_v2_chr2_+_27070964_27071027	0.120549	SMAD4	ENST00000288699.6|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr3_-_123512688_123512717	0.120438	SMAD4	ENST00000475616.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr22_+_41956767_41956852	0.118606	SMAD4	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr16_-_87799505_87799603	0.118588	SMAD4	ENST00000353170.5|KLHDC4|ENSG00000104731.9|kelch domain containing 4 	ENST00000561825.1|KLHDC4|ENSG00000104731.9|kelch domain containing 4 	ENST00000270583.5|KLHDC4|ENSG00000104731.9|kelch domain containing 4 	ENST00000562261.1|KLHDC4|ENSG00000104731.9|kelch domain containing 4 	ENST00000347925.5|KLHDC4|ENSG00000104731.9|kelch domain containing 4
hg19_v2_chr19_-_46148820_46148887	0.118105	SMAD4	ENST00000587152.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr5_-_149792295_149792332	0.118031	SMAD4	ENST00000518797.1|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000524315.1|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000009530.7|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain 	ENST00000377795.3|CD74|ENSG00000019582.10|CD74 molecule, major histocompatibility complex, class II invariant chain
hg19_v2_chr8_-_90769422_90769592	0.116597	SMAD4	ENST00000524190.1|RP11-37B2.1|ENSG00000251136.4|RP11-37B2.1	ENST00000523859.1|RP11-37B2.1|ENSG00000251136.4|RP11-37B2.1
hg19_v2_chr5_-_13944652_13944652	0.115438	SMAD4	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr19_-_11688500_11688556	0.115266	SMAD4	ENST00000433365.2|ACP5|ENSG00000102575.6|acid phosphatase 5, tartrate resistant
hg19_v2_chr12_+_124155652_124155689	0.115215	SMAD4	ENST00000426174.2|TCTN2|ENSG00000168778.7|tectonic family member 2 	ENST00000303372.5|TCTN2|ENSG00000168778.7|tectonic family member 2
hg19_v2_chr16_-_29499154_29499154	0.115126	SMAD4	ENST00000354563.5|RP11-231C14.4|ENSG00000169203.12|Uncharacterized protein
hg19_v2_chr16_+_67022476_67022498	0.114731	SMAD4	ENST00000540947.2|CES4A|ENSG00000172824.10|carboxylesterase 4A
hg19_v2_chr6_-_109777128_109777203	0.114565	SMAD4	ENST00000358807.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENST00000358577.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg19_v2_chr10_-_81708854_81708867	0.114459	SMAD4	ENST00000372292.3|SFTPD|ENSG00000133661.11|surfactant protein D
hg19_v2_chr3_+_51977294_51977327	0.114346	SMAD4	ENST00000498510.1|PARP3|ENSG00000041880.10|poly (ADP-ribose) polymerase family, member 3
hg19_v2_chr1_+_110036674_110036695	0.114236	SMAD4	ENST00000393709.3|CYB561D1|ENSG00000174151.10|cytochrome b561 family, member D1
hg19_v2_chr12_+_109569155_109569172	0.113655	SMAD4	ENST00000539864.1|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr11_+_47270475_47270507	0.113618	SMAD4	ENST00000481889.2|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000436778.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000531660.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3 	ENST00000407404.1|NR1H3|ENSG00000025434.14|nuclear receptor subfamily 1, group H, member 3
hg19_v2_chr12_+_6419877_6419905	0.112438	SMAD4	ENST00000536531.1|PLEKHG6|ENSG00000008323.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 6
hg19_v2_chr17_+_46126135_46126152	0.111966	SMAD4	ENST00000361665.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585062.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr11_+_47608198_47608245	0.111832	SMAD4	ENST00000356737.2|FAM180B|ENSG00000196666.3|family with sequence similarity 180, member B 	ENST00000538490.1|FAM180B|ENSG00000196666.3|family with sequence similarity 180, member B
hg19_v2_chr20_-_1165319_1165319	0.111395	SMAD4	ENST00000429036.1|TMEM74B|ENSG00000125895.5|transmembrane protein 74B
hg19_v2_chr14_-_21994337_21994442	0.111362	SMAD4	ENST00000537235.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2 	ENST00000450879.2|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr1_+_3541543_3541658	0.110435	SMAD4	ENST00000378344.2|TPRG1L|ENSG00000158109.10|tumor protein p63 regulated 1-like 	ENST00000344579.5|TPRG1L|ENSG00000158109.10|tumor protein p63 regulated 1-like
hg19_v2_chr6_+_90272488_90272564	0.110184	SMAD4	ENST00000485637.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6 	ENST00000522705.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr2_+_234602305_234602338	0.110181	SMAD4	ENST00000406651.1|UGT1A6|ENSG00000167165.14|UDP glucuronosyltransferase 1 family, polypeptide A6
hg19_v2_chr19_+_45251804_45251840	0.110021	SMAD4	ENST00000164227.5|BCL3|ENSG00000069399.8|B-cell CLL/lymphoma 3
hg19_v2_chr19_+_48958766_48958862	0.10963	SMAD4	ENST00000342291.2|KCNJ14|ENSG00000182324.5|potassium inwardly-rectifying channel, subfamily J, member 14
hg19_v2_chr12_-_120966943_120966985	0.109384	SMAD4	ENST00000552443.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547736.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000445328.2|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547943.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000288532.6|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
hg19_v2_chr9_-_136006496_136006558	0.109239	SMAD4	ENST00000372062.3|RALGDS|ENSG00000160271.10|ral guanine nucleotide dissociation stimulator
hg19_v2_chr2_-_236684438_236684438	0.109006	SMAD4	ENST00000409661.1|AC064874.1|ENSG00000222007.2|Uncharacterized protein
hg19_v2_chr18_+_77623668_77623668	0.108945	SMAD4	ENST00000316249.3|KCNG2|ENSG00000178342.4|potassium voltage-gated channel, subfamily G, member 2
hg19_v2_chr12_+_31079652_31079892	0.108917	SMAD4	ENST00000546076.1|TSPAN11|ENSG00000110900.10|tetraspanin 11 	ENST00000535215.1|TSPAN11|ENSG00000110900.10|tetraspanin 11 	ENST00000544427.1|TSPAN11|ENSG00000110900.10|tetraspanin 11 	ENST00000261177.9|TSPAN11|ENSG00000110900.10|tetraspanin 11
hg19_v2_chr1_+_42619070_42619092	0.108797	SMAD4	ENST00000372581.1|GUCA2B|ENSG00000044012.3|guanylate cyclase activator 2B (uroguanylin)
hg19_v2_chr14_+_102276132_102276178	0.108433	SMAD4	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_+_202385953_202385994	0.108213	SMAD4	ENST00000466968.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr4_+_3388057_3388075	0.108126	SMAD4	ENST00000538395.1|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr18_+_12308231_12308262	0.107745	SMAD4	ENST00000590103.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000591909.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000586653.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000592683.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000590967.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000591208.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V 	ENST00000591463.1|TUBB6|ENSG00000176014.8|tubulin, beta 6 class V
hg19_v2_chr19_-_51017127_51017175	0.107519	SMAD4	ENST00000389208.4|ASPDH|ENSG00000204653.5|aspartate dehydrogenase domain containing
hg19_v2_chr7_+_141463897_141463897	0.107376	SMAD4	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr11_-_119993734_119993778	0.10692	SMAD4	ENST00000533302.1|TRIM29|ENSG00000137699.12|tripartite motif containing 29
hg19_v2_chr1_-_153522562_153522612	0.106669	SMAD4	ENST00000368714.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr9_+_99690592_99690592	0.105963	SMAD4	ENST00000354649.3|NUTM2G|ENSG00000188152.8|NUT family member 2G
hg19_v2_chr17_-_34195889_34195899	0.105635	SMAD4	ENST00000311880.2|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chr1_-_45253377_45253377	0.105469	SMAD4	ENST00000372207.3|BEST4|ENSG00000142959.4|bestrophin 4
hg19_v2_chr20_+_60174827_60174849	0.104867	SMAD4	ENST00000543233.1|CDH4|ENSG00000179242.11|cadherin 4, type 1, R-cadherin (retinal)
hg19_v2_chr18_-_29340827_29340845	0.104762	SMAD4	ENST00000269205.5|SLC25A52|ENSG00000141437.7|solute carrier family 25, member 52
hg19_v2_chr16_-_25122785_25122876	0.103956	SMAD4	ENST00000563962.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1	ENST00000569920.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr15_+_44719996_44720017	0.10376	SMAD4	ENST00000559793.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000558968.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr19_-_55672037_55672079	0.103558	SMAD4	ENST00000588076.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chr7_+_37723450_37723475	0.103252	SMAD4	ENST00000447769.1|GPR141|ENSG00000187037.4|G protein-coupled receptor 141
hg19_v2_chr6_-_43595039_43595105	0.102407	SMAD4	ENST00000307114.7|GTPBP2|ENSG00000172432.14|GTP binding protein 2
hg19_v2_chr17_-_20946338_20946369	0.102025	SMAD4	ENST00000261497.4|USP22|ENSG00000124422.7|ubiquitin specific peptidase 22
hg19_v2_chr12_-_57400227_57400245	0.101925	SMAD4	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr10_-_75193308_75193325	0.101505	SMAD4	ENST00000299432.2|MSS51|ENSG00000166343.5|MSS51 mitochondrial translational activator
hg19_v2_chr1_-_172413195_172413225	0.101429	SMAD4	ENST00000344529.4|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr17_-_42298331_42298361	0.10133	SMAD4	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr17_-_67138015_67138062	0.100739	SMAD4	ENST00000284425.2|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6 	ENST00000590645.1|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v2_chr9_-_117150303_117150361	0.100642	SMAD4	ENST00000312033.3|AKNA|ENSG00000106948.12|AT-hook transcription factor
hg19_v2_chr11_+_1430983_1431010	0.100508	SMAD4	ENST00000524702.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr19_-_14629224_14629262	0.100312	SMAD4	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chrX_-_53711064_53711132	0.100108	SMAD4	ENST00000342160.3|HUWE1|ENSG00000086758.11|HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 	ENST00000446750.1|HUWE1|ENSG00000086758.11|HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr7_+_150811705_150811765	0.0998444	SMAD4	ENST00000335367.3|AGAP3|ENSG00000133612.14|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
hg19_v2_chr15_+_75970672_75970672	0.099758	SMAD4	ENST00000435356.1|AC105020.1|ENSG00000203392.2|Uncharacterized protein; cDNA FLJ12988 fis, clone NT2RP3000080
hg19_v2_chr5_-_55412774_55412784	0.0990342	SMAD4	ENST00000434982.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr10_-_735553_735683	0.0989366	SMAD4	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr5_-_168728103_168728177	0.0988427	SMAD4	ENST00000519560.1|SLIT3|ENSG00000184347.10|slit homolog 3 (Drosophila)
hg19_v2_chr15_+_44719790_44719848	0.0981418	SMAD4	ENST00000558791.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr17_-_79358929_79358954	0.0978034	SMAD4	ENST00000570301.1|RP11-1055B8.3|ENSG00000262223.2|RP11-1055B8.3
hg19_v2_chr9_-_130617029_130617040	0.0975349	SMAD4	ENST00000373203.4|ENG|ENSG00000106991.9|endoglin
hg19_v2_chr20_+_44036620_44036658	0.0975239	SMAD4	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr1_-_155177677_155177739	0.097442	SMAD4	ENST00000368378.3|THBS3|ENSG00000169231.9|thrombospondin 3 	ENST00000541990.1|THBS3|ENSG00000169231.9|thrombospondin 3 	ENST00000457183.2|THBS3|ENSG00000169231.9|thrombospondin 3
hg19_v2_chr12_-_48213735_48213763	0.0973889	SMAD4	ENST00000417902.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000417107.1|HDAC7|ENSG00000061273.13|histone deacetylase 7
hg19_v2_chr15_+_88795953_88795965	0.0973796	SMAD4	ENST00000569588.1|NTRK3-AS1|ENSG00000260305.1|NTRK3 antisense RNA 1
hg19_v2_chr6_+_44194762_44194876	0.0969142	SMAD4	ENST00000371708.1|SLC29A1|ENSG00000112759.12|solute carrier family 29 (equilibrative nucleoside transporter), member 1
hg19_v2_chr6_+_106534192_106534224	0.0966765	SMAD4	ENST00000369091.2|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain 	ENST00000369096.4|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr17_+_7792101_7792169	0.0966359	SMAD4	ENST00000358181.4|CHD3|ENSG00000170004.12|chromodomain helicase DNA binding protein 3 	ENST00000330494.7|CHD3|ENSG00000170004.12|chromodomain helicase DNA binding protein 3
hg19_v2_chr5_-_137610254_137610273	0.096597	SMAD4	ENST00000378362.3|GFRA3|ENSG00000146013.6|GDNF family receptor alpha 3
hg19_v2_chr15_-_74726283_74726306	0.0956121	SMAD4	ENST00000543145.2|SEMA7A|ENSG00000138623.5|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v2_chr17_-_34195862_34195877	0.0955738	SMAD4	ENST00000592980.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66 	ENST00000587626.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chr9_-_140115775_140116033	0.0949736	SMAD4	ENST00000391553.1|RNF208|ENSG00000212864.2|ring finger protein 208 	ENST00000392827.1|RNF208|ENSG00000212864.2|ring finger protein 208
hg19_v2_chr7_+_139529040_139529073	0.0947791	SMAD4	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr1_+_165796753_165796776	0.0945278	SMAD4	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr17_-_40897043_40897087	0.0938505	SMAD4	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr9_+_69650263_69650263	0.0934975	SMAD4	ENST00000322495.3|AL445665.1|ENSG00000176134.4|Protein LOC100996643
hg19_v2_chr6_+_159290917_159290971	0.0932718	SMAD4	ENST00000367072.1|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99
hg19_v2_chr18_+_8717369_8717384	0.0927907	SMAD4	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr1_-_161207875_161207901	0.0923304	SMAD4	ENST00000512372.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000437437.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000442691.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000412844.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000428574.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000505005.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508740.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508387.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000504010.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511676.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000502985.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367981.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000515621.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511944.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511748.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367984.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367985.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr16_-_30905263_30905292	0.0920228	SMAD4	ENST00000572628.1|BCL7C|ENSG00000099385.7|B-cell CLL/lymphoma 7C
hg19_v2_chr10_+_28966271_28966437	0.0917443	SMAD4	ENST00000375533.3|BAMBI|ENSG00000095739.7|BMP and activin membrane-bound inhibitor
hg19_v2_chr1_+_6685228_6685290	0.0912546	SMAD4	ENST00000307896.6|THAP3|ENSG00000041988.11|THAP domain containing, apoptosis associated protein 3 	ENST00000377627.3|THAP3|ENSG00000041988.11|THAP domain containing, apoptosis associated protein 3 	ENST00000472925.1|THAP3|ENSG00000041988.11|THAP domain containing, apoptosis associated protein 3
hg19_v2_chr10_+_48359344_48359376	0.0912378	SMAD4	ENST00000412534.1|ZNF488|ENSG00000165388.8|zinc finger protein 488 	ENST00000444585.1|ZNF488|ENSG00000165388.8|zinc finger protein 488
hg19_v2_chr5_+_140514782_140514851	0.0910943	SMAD4	ENST00000231134.5|PCDHB5|ENSG00000113209.6|protocadherin beta 5
hg19_v2_chr19_-_45927097_45927123	0.090637	SMAD4	ENST00000340192.7|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
hg19_v2_chr5_+_125759140_125759175	0.0904254	SMAD4	ENST00000543198.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr17_-_65992544_65992589	0.0903843	SMAD4	ENST00000580729.1|RP11-855A2.5|ENSG00000266176.1|RP11-855A2.5
hg19_v2_chr1_-_11866034_11866115	0.0901641	SMAD4	ENST00000376590.3|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr2_-_166060571_166060582	0.0891139	SMAD4	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr3_+_184038073_184038101	0.0889055	SMAD4	ENST00000428387.1|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1 	ENST00000434061.2|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1
hg19_v2_chr18_+_21572737_21572768	0.0887339	SMAD4	ENST00000304621.6|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr16_-_21868739_21868739	0.0882412	SMAD4	ENST00000415645.2|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr7_-_50628745_50628778	0.0882223	SMAD4	ENST00000380984.4|DDC|ENSG00000132437.13|dopa decarboxylase (aromatic L-amino acid decarboxylase) 	ENST00000357936.5|DDC|ENSG00000132437.13|dopa decarboxylase (aromatic L-amino acid decarboxylase) 	ENST00000426377.1|DDC|ENSG00000132437.13|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v2_chr12_-_10978957_10978957	0.0881406	SMAD4	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr11_+_65408273_65408341	0.0880706	SMAD4	ENST00000394227.3|SIPA1|ENSG00000213445.4|signal-induced proliferation-associated 1
hg19_v2_chr18_-_67624160_67624238	0.0880054	SMAD4	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr3_+_133465228_133465244	0.0876614	SMAD4	ENST00000482271.1|TF|ENSG00000091513.10|transferrin 	ENST00000264998.3|TF|ENSG00000091513.10|transferrin
hg19_v2_chr8_+_145065705_145065731	0.0871479	SMAD4	ENST00000533044.1|GRINA|ENSG00000178719.12|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v2_chr3_-_46037299_46037337	0.0869407	SMAD4	ENST00000296137.2|FYCO1|ENSG00000163820.10|FYVE and coiled-coil domain containing 1
hg19_v2_chr17_-_79533608_79533661	0.0867538	SMAD4	ENST00000572760.1|NPLOC4|ENSG00000182446.9|nuclear protein localization 4 homolog (S. cerevisiae) 	ENST00000573876.1|NPLOC4|ENSG00000182446.9|nuclear protein localization 4 homolog (S. cerevisiae)
hg19_v2_chr19_-_893200_893222	0.0859069	SMAD4	ENST00000269814.4|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000395808.3|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000312090.6|MED16|ENSG00000175221.10|mediator complex subunit 16 	ENST00000325464.1|MED16|ENSG00000175221.10|mediator complex subunit 16
hg19_v2_chr2_+_219840955_219841012	0.0858993	SMAD4	ENST00000598002.1|LINC00608|ENSG00000236445.2|long intergenic non-protein coding RNA 608 	ENST00000432733.1|LINC00608|ENSG00000236445.2|long intergenic non-protein coding RNA 608
hg19_v2_chr5_+_140625147_140625147	0.0855911	SMAD4	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr1_+_43291220_43291239	0.0854248	SMAD4	ENST00000372514.3|ERMAP|ENSG00000164010.9|erythroblast membrane-associated protein (Scianna blood group)
hg19_v2_chr19_-_6433765_6433778	0.0851372	SMAD4	ENST00000321510.6|SLC25A41|ENSG00000181240.9|solute carrier family 25, member 41
hg19_v2_chr1_+_28655505_28655629	0.0838501	SMAD4	ENST00000373842.4|MED18|ENSG00000130772.9|mediator complex subunit 18 	ENST00000398997.2|MED18|ENSG00000130772.9|mediator complex subunit 18
hg19_v2_chr22_-_21579843_21579843	0.0837105	SMAD4	ENST00000405188.4|GGT2|ENSG00000133475.12|gamma-glutamyltransferase 2
hg19_v2_chr18_+_3449821_3450034	0.0834339	SMAD4	ENST00000407501.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000405385.3|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000546979.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr3_+_35721182_35721277	0.0834247	SMAD4	ENST00000413378.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa 	ENST00000417925.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr17_-_42200958_42200989	0.0831103	SMAD4	ENST00000336057.5|HDAC5|ENSG00000108840.11|histone deacetylase 5
hg19_v2_chr12_-_52604607_52604639	0.0830079	SMAD4	ENST00000551894.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80 	ENST00000553017.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80
hg19_v2_chr12_-_13256571_13256592	0.082746	SMAD4	ENST00000545401.1|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000432710.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000351606.6|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr22_+_38035459_38035493	0.0825023	SMAD4	ENST00000357436.4|SH3BP1|ENSG00000100092.16|SH3-domain binding protein 1
hg19_v2_chr22_+_29279552_29279586	0.0822801	SMAD4	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr19_-_46285736_46285754	0.0815896	SMAD4	ENST00000291270.4|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000447742.2|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000354227.5|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase
hg19_v2_chr16_-_10652993_10653057	0.0802932	SMAD4	ENST00000536829.1|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr8_-_101571964_101572017	0.0800091	SMAD4	ENST00000520552.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000521345.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000523000.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000335659.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000358990.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000519597.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46
hg19_v2_chr7_-_16872932_16873059	0.0799197	SMAD4	ENST00000419572.2|AGR2|ENSG00000106541.7|anterior gradient 2 	ENST00000412973.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr3_+_147657764_147657816	0.0798511	SMAD4	ENST00000467198.1|RP11-71N10.1|ENSG00000239922.1|RP11-71N10.1	ENST00000485006.1|RP11-71N10.1|ENSG00000239922.1|RP11-71N10.1
hg19_v2_chr1_-_156460391_156460417	0.0798043	SMAD4	ENST00000360595.3|MEF2D|ENSG00000116604.13|myocyte enhancer factor 2D
hg19_v2_chr3_+_45017722_45017772	0.0794383	SMAD4	ENST00000265564.7|EXOSC7|ENSG00000075914.8|exosome component 7
hg19_v2_chr19_+_17581253_17581352	0.0792582	SMAD4	ENST00000252595.7|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1 	ENST00000598424.1|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1
hg19_v2_chr17_+_80009330_80009379	0.0791632	SMAD4	ENST00000580716.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583961.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr20_+_9146969_9147005	0.0791092	SMAD4	ENST00000416836.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chrX_-_65859096_65859155	0.0789147	SMAD4	ENST00000456230.2|EDA2R|ENSG00000131080.10|ectodysplasin A2 receptor
hg19_v2_chr1_+_206643787_206643803	0.0786918	SMAD4	ENST00000367120.3|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr5_+_140566_140681	0.0780219	SMAD4	ENST00000502646.1|PLEKHG4B|ENSG00000153404.9|pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
hg19_v2_chr7_-_112430427_112430478	0.0769662	SMAD4	ENST00000449743.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000441474.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000454074.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000447395.1|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr11_+_86511569_86511599	0.0769626	SMAD4	ENST00000441050.1|PRSS23|ENSG00000150687.7|protease, serine, 23
hg19_v2_chr3_-_12200851_12200885	0.0764795	SMAD4	ENST00000287814.4|TIMP4|ENSG00000157150.4|TIMP metallopeptidase inhibitor 4
hg19_v2_chr16_+_4838412_4838457	0.0760231	SMAD4	ENST00000589327.1|SMIM22|ENSG00000267795.1|small integral membrane protein 22
hg19_v2_chr18_+_11857439_11857470	0.0759498	SMAD4	ENST00000602628.1|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr2_+_219524473_219524495	0.0758122	SMAD4	ENST00000439945.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000431802.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr2_+_105858200_105858200	0.0747673	SMAD4	ENST00000258456.1|GPR45|ENSG00000135973.1|G protein-coupled receptor 45
hg19_v2_chr2_+_219524379_219524465	0.0744853	SMAD4	ENST00000443791.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000359273.3|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000392109.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000392110.2|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000423377.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000392111.2|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000412366.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr9_+_2157655_2157680	0.0739259	SMAD4	ENST00000452193.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr1_+_28918712_28918712	0.0730546	SMAD4	ENST00000373826.3|RAB42|ENSG00000188060.6|RAB42, member RAS oncogene family
hg19_v2_chr8_-_143858590_143858744	0.0717008	SMAD4	ENST00000398906.1|LYNX1|ENSG00000180155.14|Ly6/neurotoxin 1 	ENST00000522929.1|LYNX1|ENSG00000180155.14|Ly6/neurotoxin 1
hg19_v2_chr7_-_107443652_107443675	0.070789	SMAD4	ENST00000340010.5|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000422236.2|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000453332.1|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3
hg19_v2_chr4_-_74847800_74847841	0.0704995	SMAD4	ENST00000296029.3|PF4|ENSG00000163737.3|platelet factor 4
hg19_v2_chr1_-_214638146_214638146	0.0698869	SMAD4	ENST00000543945.1|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr20_+_35202909_35203075	0.0698252	SMAD4	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr8_+_107282368_107282379	0.0697295	SMAD4	ENST00000521369.2|RP11-395G23.3|ENSG00000254615.2|RP11-395G23.3
hg19_v2_chr2_+_29336855_29336914	0.069696	SMAD4	ENST00000404424.1|CLIP4|ENSG00000115295.15|CAP-GLY domain containing linker protein family, member 4
hg19_v2_chr19_+_7660716_7660802	0.0694971	SMAD4	ENST00000160298.4|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3 	ENST00000446248.2|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3
hg19_v2_chr1_-_207095212_207095278	0.0694522	SMAD4	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr11_-_74204742_74204778	0.0693346	SMAD4	ENST00000310109.4|LIPT2|ENSG00000175536.6|lipoyl(octanoyl) transferase 2 (putative)
hg19_v2_chr1_+_89829610_89829627	0.0690934	SMAD4	ENST00000370456.4|GBP6|ENSG00000183347.13|guanylate binding protein family, member 6 	ENST00000535065.1|GBP6|ENSG00000183347.13|guanylate binding protein family, member 6
hg19_v2_chr8_-_144699668_144699737	0.0678897	SMAD4	ENST00000425753.2|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B
hg19_v2_chr3_+_72201910_72202085	0.0677648	SMAD4	ENST00000469178.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870 	ENST00000485404.1|LINC00870|ENSG00000243083.1|long intergenic non-protein coding RNA 870
hg19_v2_chr7_-_155601766_155601846	0.0676107	SMAD4	ENST00000430104.1|SHH|ENSG00000164690.3|sonic hedgehog
hg19_v2_chr16_+_2880254_2880278	0.0673894	SMAD4	ENST00000570670.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr20_-_43883197_43883212	0.0670788	SMAD4	ENST00000338380.2|SLPI|ENSG00000124107.5|secretory leukocyte peptidase inhibitor
hg19_v2_chr16_-_4838255_4838356	0.0670737	SMAD4	ENST00000591624.1|SEPT12|ENSG00000140623.9|septin 12 	ENST00000396693.5|SEPT12|ENSG00000140623.9|septin 12
hg19_v2_chr19_+_54372693_54372711	0.0668808	SMAD4	ENST00000391768.2|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker
hg19_v2_chr11_+_126276070_126276090	0.0662007	SMAD4	ENST00000449406.2|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000532243.1|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg19_v2_chr1_-_55341551_55341668	0.0660353	SMAD4	ENST00000537443.1|DHCR24|ENSG00000116133.7|24-dehydrocholesterol reductase
hg19_v2_chr16_-_46655538_46655538	0.0653776	SMAD4	ENST00000303383.3|SHCBP1|ENSG00000171241.4|SHC SH2-domain binding protein 1
hg19_v2_chr8_+_38585704_38585867	0.0652917	SMAD4	ENST00000519416.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520615.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr8_-_37594944_37595155	0.065184	SMAD4	ENST00000330539.1|RP11-863K10.7|ENSG00000183154.1|Uncharacterized protein
hg19_v2_chr4_-_39640700_39640712	0.0650927	SMAD4	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr4_+_144258288_144258353	0.0650609	SMAD4	ENST00000514639.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr16_+_48278178_48278336	0.0647789	SMAD4	ENST00000285737.4|LONP2|ENSG00000102910.9|lon peptidase 2, peroxisomal 	ENST00000535754.1|LONP2|ENSG00000102910.9|lon peptidase 2, peroxisomal
hg19_v2_chr12_+_8666126_8666182	0.0646487	SMAD4	ENST00000299665.2|CLEC4D|ENSG00000166527.3|C-type lectin domain family 4, member D
hg19_v2_chr17_+_10048831_10048831	0.0645819	SMAD4	ENST00000581040.1|AC000003.2|ENSG00000264194.1|CDNA FLJ25865 fis, clone CBR01927
hg19_v2_chr7_-_128695147_128695203	0.0643592	SMAD4	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr10_-_98031265_98031306	0.064101	SMAD4	ENST00000224337.5|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000371176.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr16_-_20911641_20911720	0.0638697	SMAD4	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr1_+_206730484_206730499	0.06384	SMAD4	ENST00000304534.8|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5
hg19_v2_chr4_+_160188889_160188968	0.063723	SMAD4	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr3_-_109056419_109056438	0.063511	SMAD4	ENST00000335658.6|DPPA4|ENSG00000121570.8|developmental pluripotency associated 4
hg19_v2_chr7_+_116451100_116451124	0.0631929	SMAD4	ENST00000464223.1|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2 	ENST00000484325.1|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr6_-_85473156_85473210	0.0631585	SMAD4	ENST00000606784.1|TBX18|ENSG00000112837.12|T-box 18 	ENST00000606325.1|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr20_+_1875378_1875448	0.0627868	SMAD4	ENST00000356025.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr15_-_45670924_45670991	0.0627523	SMAD4	ENST00000396659.3|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr5_+_82767583_82767744	0.0627124	SMAD4	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr10_-_72141330_72141414	0.0627016	SMAD4	ENST00000395011.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20 	ENST00000395010.1|LRRC20|ENSG00000172731.9|leucine rich repeat containing 20
hg19_v2_chr12_-_16759711_16759734	0.0624269	SMAD4	ENST00000447609.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr2_+_181988560_181988577	0.0621453	SMAD4	ENST00000424170.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000435411.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr17_+_72211755_72211776	0.0617915	SMAD4	ENST00000529107.1|TTYH2|ENSG00000141540.6|tweety family member 2
hg19_v2_chr10_-_73848764_73848795	0.0612655	SMAD4	ENST00000317376.4|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 	ENST00000412663.1|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chr14_-_74462922_74463011	0.0612404	SMAD4	ENST00000553284.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr19_+_4153598_4153665	0.0607412	SMAD4	ENST00000078445.2|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000252587.3|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000595923.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602257.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602147.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3
hg19_v2_chr13_-_47471155_47471214	0.0605788	SMAD4	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr7_-_112430647_112430776	0.06019	SMAD4	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr9_+_124088860_124088895	0.0600722	SMAD4	ENST00000373806.1|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr11_+_57105991_57105991	0.059804	SMAD4	ENST00000263314.2|P2RX3|ENSG00000109991.4|purinergic receptor P2X, ligand-gated ion channel, 3
hg19_v2_chr13_-_52733670_52733760	0.05909	SMAD4	ENST00000550841.1|NEK3|ENSG00000136098.12|NIMA-related kinase 3
hg19_v2_chr7_+_39125365_39125489	0.0589469	SMAD4	ENST00000559001.1|POU6F2|ENSG00000106536.15|POU class 6 homeobox 2 	ENST00000464276.2|POU6F2|ENSG00000106536.15|POU class 6 homeobox 2
hg19_v2_chr3_+_69811858_69811881	0.0584102	SMAD4	ENST00000433517.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr2_-_197457335_197457421	0.0577291	SMAD4	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr15_+_81071684_81071719	0.0576958	SMAD4	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr8_+_72755367_72755367	0.0572646	SMAD4	ENST00000537896.1|RP11-383H13.1|ENSG00000235531.5|Protein LOC100132891; cDNA FLJ53548
hg19_v2_chr12_-_99548270_99548295	0.0570913	SMAD4	ENST00000546568.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000332712.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000546960.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr3_-_194119083_194119083	0.0562902	SMAD4	ENST00000401815.1|GP5|ENSG00000178732.4|glycoprotein V (platelet)
hg19_v2_chr8_+_106331769_106331772	0.0562831	SMAD4	ENST00000520492.1|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chrX_-_53461288_53461303	0.0560537	SMAD4	ENST00000375298.4|HSD17B10|ENSG00000072506.8|hydroxysteroid (17-beta) dehydrogenase 10 	ENST00000375304.5|HSD17B10|ENSG00000072506.8|hydroxysteroid (17-beta) dehydrogenase 10
hg19_v2_chr22_-_20461786_20461786	0.0559767	SMAD4	ENST00000426804.1|RIMBP3|ENSG00000196622.6|RIMS binding protein 3
hg19_v2_chr4_+_103422499_103422632	0.055332	SMAD4	ENST00000511926.1|NFKB1|ENSG00000109320.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 	ENST00000507079.1|NFKB1|ENSG00000109320.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
hg19_v2_chr19_+_13001840_13002001	0.0551668	SMAD4	ENST00000222214.5|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000589039.1|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000591470.1|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000457854.1|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000422947.2|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000588905.1|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase 	ENST00000587072.1|GCDH|ENSG00000105607.8|glutaryl-CoA dehydrogenase
hg19_v2_chr20_+_32150140_32150230	0.0550162	SMAD4	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr4_+_154074217_154074270	0.054951	SMAD4	ENST00000437508.2|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr2_-_37551846_37551952	0.0547943	SMAD4	ENST00000443187.1|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr15_-_45694380_45694430	0.0543853	SMAD4	ENST00000561148.1|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr8_+_38586068_38586158	0.0543461	SMAD4	ENST00000443286.2|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520340.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000518415.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr10_+_123872483_123872573	0.0540889	SMAD4	ENST00000369001.1|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr15_-_52944231_52944268	0.0540123	SMAD4	ENST00000546305.2|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr15_+_67420441_67420606	0.0539593	SMAD4	ENST00000558894.1|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr1_+_52682052_52682052	0.0535427	SMAD4	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr8_-_22550691_22550717	0.0529768	SMAD4	ENST00000519492.1|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr10_+_115939008_115939073	0.052537	SMAD4	ENST00000369282.1|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000251864.2|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000369281.2|TDRD1|ENSG00000095627.5|tudor domain containing 1 	ENST00000422662.1|TDRD1|ENSG00000095627.5|tudor domain containing 1
hg19_v2_chr10_-_15413035_15413131	0.0521159	SMAD4	ENST00000378116.4|FAM171A1|ENSG00000148468.12|family with sequence similarity 171, member A1 	ENST00000455654.1|FAM171A1|ENSG00000148468.12|family with sequence similarity 171, member A1
hg19_v2_chr9_-_113342160_113342214	0.0521139	SMAD4	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr5_+_149877334_149877354	0.0518361	SMAD4	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr16_+_77246337_77246490	0.0518317	SMAD4	ENST00000563157.1|SYCE1L|ENSG00000205078.5|synaptonemal complex central element protein 1-like
hg19_v2_chr6_-_11807277_11807292	0.0516813	SMAD4	ENST00000379415.2|ADTRP|ENSG00000111863.8|androgen-dependent TFPI-regulating protein
hg19_v2_chr15_-_85197501_85197566	0.0513034	SMAD4	ENST00000434634.2|WDR73|ENSG00000177082.8|WD repeat domain 73
hg19_v2_chr6_-_32908765_32908786	0.0512059	SMAD4	ENST00000416244.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr11_+_118958689_118958710	0.0508825	SMAD4	ENST00000535253.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000392841.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase
hg19_v2_chr9_-_21228221_21228221	0.0507649	SMAD4	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr1_+_228645796_228645822	0.0501946	SMAD4	ENST00000369160.2|HIST3H2BB|ENSG00000196890.3|histone cluster 3, H2bb
hg19_v2_chr1_-_151431647_151431669	0.0500227	SMAD4	ENST00000368863.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000409503.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000491586.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000533351.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000540984.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr1_-_38157877_38157953	0.0495728	SMAD4	ENST00000477060.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109 	ENST00000491981.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109 	ENST00000488137.1|C1orf109|ENSG00000116922.10|chromosome 1 open reading frame 109
hg19_v2_chr9_-_123476719_123476810	0.0493884	SMAD4	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr3_-_52029958_52029974	0.0491755	SMAD4	ENST00000294189.6|RPL29|ENSG00000162244.6|ribosomal protein L29
hg19_v2_chr22_+_22988816_22988816	0.0490436	SMAD4	ENST00000480559.1|GGTLC2|ENSG00000100121.8|gamma-glutamyltransferase light chain 2 	ENST00000448514.1|GGTLC2|ENSG00000100121.8|gamma-glutamyltransferase light chain 2
hg19_v2_chr2_+_27071045_27071157	0.0489802	SMAD4	ENST00000401478.1|DPYSL5|ENSG00000157851.12|dihydropyrimidinase-like 5
hg19_v2_chr3_+_44916098_44916104	0.0488597	SMAD4	ENST00000296125.4|TGM4|ENSG00000163810.7|transglutaminase 4
hg19_v2_chr5_-_142065612_142065638	0.0488324	SMAD4	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr14_-_102026643_102026775	0.0475657	SMAD4	ENST00000555882.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554441.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000553729.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557109.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557532.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554694.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554735.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000555174.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557661.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head)
hg19_v2_chr1_-_234667504_234667525	0.0475077	SMAD4	ENST00000421207.1|RP5-855F14.1|ENSG00000231768.1|RP5-855F14.1	ENST00000435574.1|RP5-855F14.1|ENSG00000231768.1|RP5-855F14.1
hg19_v2_chr19_-_49220084_49220278	0.0471526	SMAD4	ENST00000595591.1|MAMSTR|ENSG00000176909.7|MEF2 activating motif and SAP domain containing transcriptional regulator 	ENST00000356751.4|MAMSTR|ENSG00000176909.7|MEF2 activating motif and SAP domain containing transcriptional regulator 	ENST00000594582.1|MAMSTR|ENSG00000176909.7|MEF2 activating motif and SAP domain containing transcriptional regulator
hg19_v2_chr8_-_145642267_145642279	0.0471451	SMAD4	ENST00000301305.3|SLC39A4|ENSG00000147804.5|solute carrier family 39 (zinc transporter), member 4
hg19_v2_chr12_+_68042495_68042508	0.0469946	SMAD4	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr16_+_67034456_67034465	0.046864	SMAD4	ENST00000540579.1|CES4A|ENSG00000172824.10|carboxylesterase 4A
hg19_v2_chr14_+_24540046_24540132	0.0458593	SMAD4	ENST00000397016.2|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000537691.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000560356.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000558450.1|CPNE6|ENSG00000100884.5|copine VI (neuronal)
hg19_v2_chr15_-_37391507_37391604	0.0457853	SMAD4	ENST00000557796.2|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397620.2|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr18_+_11851383_11851399	0.0455354	SMAD4	ENST00000526991.2|CHMP1B|ENSG00000255112.2|charged multivesicular body protein 1B
hg19_v2_chr5_-_124081008_124081118	0.0454608	SMAD4	ENST00000306315.5|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr1_+_206858328_206858382	0.0448034	SMAD4	ENST00000367103.3|MAPKAPK2|ENSG00000162889.6|mitogen-activated protein kinase-activated protein kinase 2
hg19_v2_chr14_+_20937538_20937700	0.0445935	SMAD4	ENST00000361505.5|PNP|ENSG00000198805.7|purine nucleoside phosphorylase 	ENST00000553591.1|PNP|ENSG00000198805.7|purine nucleoside phosphorylase
hg19_v2_chr2_+_55459495_55459568	0.0444667	SMAD4	ENST00000272317.6|RPS27A|ENSG00000143947.8|ribosomal protein S27a 	ENST00000449323.1|RPS27A|ENSG00000143947.8|ribosomal protein S27a
hg19_v2_chr15_+_64752927_64752950	0.0441189	SMAD4	ENST00000416172.1|ZNF609|ENSG00000180357.5|zinc finger protein 609
hg19_v2_chr17_+_79495397_79495558	0.0438251	SMAD4	ENST00000417245.2|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 	ENST00000334850.7|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
hg19_v2_chr6_+_41196052_41196063	0.0438132	SMAD4	ENST00000341495.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr5_+_177540444_177540506	0.0435409	SMAD4	ENST00000274605.5|N4BP3|ENSG00000145911.5|NEDD4 binding protein 3
hg19_v2_chr14_-_57197224_57197273	0.0432357	SMAD4	ENST00000554597.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein  	ENST00000556696.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein
hg19_v2_chr4_+_154073469_154073645	0.0430843	SMAD4	ENST00000441616.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr19_+_30017406_30017406	0.0427961	SMAD4	ENST00000335523.7|VSTM2B|ENSG00000187135.7|V-set and transmembrane domain containing 2B
hg19_v2_chr21_+_39628655_39628672	0.042299	SMAD4	ENST00000398925.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000398928.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000328656.4|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000443341.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr15_-_77988485_77988494	0.0417271	SMAD4	ENST00000561030.1|LINGO1|ENSG00000169783.8|leucine rich repeat and Ig domain containing 1
hg19_v2_chr8_+_118532937_118532997	0.0417089	SMAD4	ENST00000297347.3|MED30|ENSG00000164758.3|mediator complex subunit 30
hg19_v2_chr20_+_43538756_43538785	0.0416817	SMAD4	ENST00000537323.1|PABPC1L|ENSG00000101104.8|poly(A) binding protein, cytoplasmic 1-like 	ENST00000217073.2|PABPC1L|ENSG00000101104.8|poly(A) binding protein, cytoplasmic 1-like
hg19_v2_chr3_+_184038234_184038258	0.0415147	SMAD4	ENST00000427607.1|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1 	ENST00000457456.1|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1
hg19_v2_chr2_+_171036635_171036673	0.0414205	SMAD4	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chrX_+_49832231_49832267	0.0411362	SMAD4	ENST00000376108.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr1_+_110453514_110453530	0.0409726	SMAD4	ENST00000369802.3|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000420111.2|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr19_-_6333614_6333640	0.0409519	SMAD4	ENST00000301452.4|ACER1|ENSG00000167769.4|alkaline ceramidase 1
hg19_v2_chr11_-_18062872_18062872	0.0404397	SMAD4	ENST00000250018.2|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr18_+_905104_905118	0.0400136	SMAD4	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr14_+_91581011_91581044	0.039816	SMAD4	ENST00000523894.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522322.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523771.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr4_+_126237554_126237554	0.0397227	SMAD4	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr10_-_90712520_90712536	0.0395379	SMAD4	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr5_-_138718973_138719006	0.0394873	SMAD4	ENST00000353963.3|SLC23A1|ENSG00000170482.12|solute carrier family 23 (ascorbic acid transporter), member 1 	ENST00000348729.3|SLC23A1|ENSG00000170482.12|solute carrier family 23 (ascorbic acid transporter), member 1
hg19_v2_chr2_+_113479063_113479063	0.0394508	SMAD4	ENST00000327581.4|NT5DC4|ENSG00000144130.7|5'-nucleotidase domain containing 4
hg19_v2_chr20_+_61867235_61867246	0.0391406	SMAD4	ENST00000342412.6|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7 	ENST00000217169.3|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7
hg19_v2_chr9_-_37034028_37034157	0.0387315	SMAD4	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr17_+_7761301_7761396	0.0386172	SMAD4	ENST00000332439.4|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1 	ENST00000570446.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr1_-_28520384_28520393	0.038556	SMAD4	ENST00000305392.3|PTAFR|ENSG00000169403.7|platelet-activating factor receptor
hg19_v2_chr17_-_39023462_39023477	0.0385457	SMAD4	ENST00000251643.4|KRT12|ENSG00000187242.4|keratin 12
hg19_v2_chr8_-_29939933_29939949	0.038374	SMAD4	ENST00000522794.1|TMEM66|ENSG00000133872.9|transmembrane protein 66
hg19_v2_chr11_-_8832182_8832387	0.0383156	SMAD4	ENST00000527510.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000528527.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000528523.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000313726.6|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr1_-_62190793_62190822	0.0382385	SMAD4	ENST00000371177.2|TM2D1|ENSG00000162604.8|TM2 domain containing 1 	ENST00000606498.1|TM2D1|ENSG00000162604.8|TM2 domain containing 1
hg19_v2_chr1_-_242162375_242162409	0.0381541	SMAD4	ENST00000357246.3|MAP1LC3C|ENSG00000197769.5|microtubule-associated protein 1 light chain 3 gamma
hg19_v2_chr2_-_62115725_62115939	0.0380114	SMAD4	ENST00000538252.1|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta) 	ENST00000544079.1|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta) 	ENST00000394440.3|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta)
hg19_v2_chr20_+_35090150_35090240	0.0377575	SMAD4	ENST00000340491.4|DLGAP4|ENSG00000080845.13|discs, large (Drosophila) homolog-associated protein 4
hg19_v2_chr11_+_66036004_66036079	0.0376919	SMAD4	ENST00000311481.6|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family 	ENST00000527397.1|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family
hg19_v2_chr1_-_240775447_240775462	0.0375338	SMAD4	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr13_+_102104980_102105050	0.0373394	SMAD4	ENST00000545560.2|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chrX_-_132095419_132095426	0.0373358	SMAD4	ENST00000370836.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2 	ENST00000521489.1|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr1_+_155099927_155099964	0.0369267	SMAD4	ENST00000368407.3|EFNA1|ENSG00000169242.7|ephrin-A1
hg19_v2_chr11_+_63997750_63997807	0.0364603	SMAD4	ENST00000321685.3|DNAJC4|ENSG00000110011.9|DnaJ (Hsp40) homolog, subfamily C, member 4
hg19_v2_chr12_-_70093235_70093256	0.0358845	SMAD4	ENST00000266661.4|BEST3|ENSG00000127325.14|bestrophin 3
hg19_v2_chr3_-_55515202_55515224	0.0357575	SMAD4	ENST00000482079.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr1_-_161168834_161168851	0.0355029	SMAD4	ENST00000367995.3|ADAMTS4|ENSG00000158859.9|ADAM metallopeptidase with thrombospondin type 1 motif, 4 	ENST00000367996.5|ADAMTS4|ENSG00000158859.9|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg19_v2_chr19_+_10563567_10563617	0.0353894	SMAD4	ENST00000344979.3|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr22_+_19929130_19929333	0.0352089	SMAD4	ENST00000361682.6|COMT|ENSG00000093010.7|catechol-O-methyltransferase 	ENST00000403184.1|COMT|ENSG00000093010.7|catechol-O-methyltransferase 	ENST00000403710.1|COMT|ENSG00000093010.7|catechol-O-methyltransferase 	ENST00000407537.1|COMT|ENSG00000093010.7|catechol-O-methyltransferase
hg19_v2_chr12_+_53848505_53848532	0.0347355	SMAD4	ENST00000552819.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000455667.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr4_-_185694872_185695027	0.0343078	SMAD4	ENST00000505492.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr12_-_772901_772945	0.0336097	SMAD4	ENST00000305108.4|NINJ2|ENSG00000171840.7|ninjurin 2
hg19_v2_chr16_-_68404908_68404919	0.0335418	SMAD4	ENST00000574662.1|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr4_+_39699664_39699772	0.0334696	SMAD4	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr12_-_6484715_6484736	0.0331227	SMAD4	ENST00000228916.2|SCNN1A|ENSG00000111319.8|sodium channel, non-voltage-gated 1 alpha subunit
hg19_v2_chr19_+_17638059_17638113	0.0326409	SMAD4	ENST00000599164.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000449408.2|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000600871.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000599124.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr3_-_123123407_123123440	0.0324827	SMAD4	ENST00000466617.1|ADCY5|ENSG00000173175.10|adenylate cyclase 5
hg19_v2_chr16_-_2379688_2379725	0.0322882	SMAD4	ENST00000567910.1|ABCA3|ENSG00000167972.9|ATP-binding cassette, sub-family A (ABC1), member 3
hg19_v2_chr9_+_5890802_5890922	0.0320761	SMAD4	ENST00000381477.3|MLANA|ENSG00000120215.5|melan-A 	ENST00000381476.1|MLANA|ENSG00000120215.5|melan-A 	ENST00000381471.1|MLANA|ENSG00000120215.5|melan-A
hg19_v2_chr7_+_44663908_44664061	0.0317021	SMAD4	ENST00000543843.1|OGDH|ENSG00000105953.10|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
hg19_v2_chr19_+_48325097_48325211	0.0314877	SMAD4	ENST00000221996.7|CRX|ENSG00000105392.11|cone-rod homeobox 	ENST00000539067.1|CRX|ENSG00000105392.11|cone-rod homeobox
hg19_v2_chr11_+_115498761_115498783	0.0308162	SMAD4	ENST00000424313.2|AP000997.1|ENSG00000255599.1|AP000997.1
hg19_v2_chr11_-_6495082_6495095	0.0306007	SMAD4	ENST00000536344.1|TRIM3|ENSG00000110171.14|tripartite motif containing 3
hg19_v2_chr6_+_150690028_150690058	0.0300073	SMAD4	ENST00000229447.5|IYD|ENSG00000009765.10|iodotyrosine deiodinase 	ENST00000344419.3|IYD|ENSG00000009765.10|iodotyrosine deiodinase
hg19_v2_chr12_-_49412588_49412594	0.0299796	SMAD4	ENST00000547082.1|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit 	ENST00000395170.3|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
hg19_v2_chr15_+_40861487_40861552	0.0296515	SMAD4	ENST00000315616.7|RPUSD2|ENSG00000166133.13|RNA pseudouridylate synthase domain containing 2 	ENST00000559271.1|RPUSD2|ENSG00000166133.13|RNA pseudouridylate synthase domain containing 2
hg19_v2_chr18_-_53068911_53068935	0.0295456	SMAD4	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chrX_+_128913906_128913960	0.0295267	SMAD4	ENST00000356892.3|SASH3|ENSG00000122122.9|SAM and SH3 domain containing 3
hg19_v2_chr16_-_25122735_25122779	0.0294333	SMAD4	ENST00000563176.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr12_-_14996355_14996441	0.0294132	SMAD4	ENST00000228936.4|ART4|ENSG00000111339.6|ADP-ribosyltransferase 4 (Dombrock blood group)
hg19_v2_chr14_-_23426270_23426306	0.0290874	SMAD4	ENST00000557591.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000397409.4|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000490506.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4 	ENST00000554406.1|HAUS4|ENSG00000092036.12|HAUS augmin-like complex, subunit 4
hg19_v2_chr12_+_133656995_133657060	0.0289731	SMAD4	ENST00000356456.5|ZNF140|ENSG00000196387.5|zinc finger protein 140
hg19_v2_chr1_+_202792385_202792385	0.0286917	SMAD4	ENST00000549576.1|RP11-480I12.4|ENSG00000184774.6|Putative inactive alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515
hg19_v2_chr14_-_95942173_95942173	0.0284677	SMAD4	ENST00000334258.5|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3 	ENST00000557275.1|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3 	ENST00000553340.1|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3
hg19_v2_chr1_+_201592013_201592013	0.0284295	SMAD4	ENST00000593583.1|AC096677.1|ENSG00000269690.1|Uncharacterized protein ENSP00000471857
hg19_v2_chr12_-_117799446_117799582	0.0273898	SMAD4	ENST00000317775.6|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal) 	ENST00000344089.3|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal)
hg19_v2_chr17_-_56621665_56621729	0.0273541	SMAD4	ENST00000321691.3|C17orf47|ENSG00000181013.3|chromosome 17 open reading frame 47
hg19_v2_chr19_+_41313017_41313148	0.0273018	SMAD4	ENST00000595621.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2 	ENST00000595051.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2
hg19_v2_chr15_-_58571445_58571478	0.0272819	SMAD4	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr6_+_18387570_18387588	0.0271366	SMAD4	ENST00000259939.3|RNF144B|ENSG00000137393.8|ring finger protein 144B
hg19_v2_chr15_+_83209620_83209620	0.0271051	SMAD4	ENST00000568285.1|RP11-379H8.1|ENSG00000261086.1|Uncharacterized protein
hg19_v2_chr2_+_170366203_170366225	0.0268096	SMAD4	ENST00000284669.1|KLHL41|ENSG00000239474.2|kelch-like family member 41
hg19_v2_chr1_-_45965525_45965652	0.0264957	SMAD4	ENST00000488405.2|CCDC163P|ENSG00000236624.4|coiled-coil domain containing 163, pseudogene 	ENST00000490551.3|CCDC163P|ENSG00000236624.4|coiled-coil domain containing 163, pseudogene 	ENST00000432082.1|CCDC163P|ENSG00000236624.4|coiled-coil domain containing 163, pseudogene
hg19_v2_chr2_-_190927447_190927466	0.0263613	SMAD4	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr5_+_36152163_36152174	0.0260885	SMAD4	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr19_+_10765003_10765058	0.0259704	SMAD4	ENST00000407004.3|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589998.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589600.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr20_+_34020827_34020827	0.0258758	SMAD4	ENST00000374375.1|GDF5OS|ENSG00000204183.1|growth differentiation factor 5 opposite strand
hg19_v2_chr18_-_53253000_53253100	0.0254308	SMAD4	ENST00000566514.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr15_-_83240553_83240576	0.0250148	SMAD4	ENST00000423133.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000398591.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr12_-_49412541_49412580	0.0248218	SMAD4	ENST00000547306.1|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit 	ENST00000548857.1|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit 	ENST00000551696.1|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit 	ENST00000316299.5|PRKAG1|ENSG00000181929.7|protein kinase, AMP-activated, gamma 1 non-catalytic subunit
hg19_v2_chr22_-_21581926_21581926	0.0242803	SMAD4	ENST00000401924.1|GGT2|ENSG00000133475.12|gamma-glutamyltransferase 2
hg19_v2_chr9_+_72002837_72002837	0.0237348	SMAD4	ENST00000377216.3|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr12_-_49245916_49245932	0.0234305	SMAD4	ENST00000552512.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 	ENST00000551468.1|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v2_chrX_+_18725758_18725784	0.0227769	SMAD4	ENST00000472826.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000544635.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000496075.2|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1
hg19_v2_chr19_+_852291_852310	0.0226041	SMAD4	ENST00000263621.1|ELANE|ENSG00000197561.2|elastase, neutrophil expressed
hg19_v2_chr17_-_70053866_70053882	0.0225863	SMAD4	ENST00000540802.1|RP11-84E24.2|ENSG00000254148.3|RP11-84E24.2
hg19_v2_chr6_-_56507586_56507794	0.0224126	SMAD4	ENST00000439203.1|DST|ENSG00000151914.13|dystonin 	ENST00000518935.1|DST|ENSG00000151914.13|dystonin 	ENST00000446842.2|DST|ENSG00000151914.13|dystonin 	ENST00000370765.6|DST|ENSG00000151914.13|dystonin 	ENST00000244364.6|DST|ENSG00000151914.13|dystonin
hg19_v2_chr19_+_7069426_7069482	0.0220474	SMAD4	ENST00000252840.6|ZNF557|ENSG00000130544.7|zinc finger protein 557 	ENST00000414706.1|ZNF557|ENSG00000130544.7|zinc finger protein 557
hg19_v2_chr1_+_203096831_203096864	0.0218986	SMAD4	ENST00000337894.4|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr3_-_55515400_55515437	0.0217709	SMAD4	ENST00000497027.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr13_-_46679185_46679211	0.0216448	SMAD4	ENST00000439329.3|CPB2|ENSG00000080618.9|carboxypeptidase B2 (plasma)
hg19_v2_chr5_-_171433819_171433911	0.0214562	SMAD4	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr11_-_111794446_111794471	0.0213868	SMAD4	ENST00000527950.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr22_-_21905750_21905750	0.0210644	SMAD4	ENST00000433039.1|RIMBP3C|ENSG00000183246.6|RIMS binding protein 3C
hg19_v2_chr2_+_239008780_239008802	0.0208899	SMAD4	ENST00000343063.3|ESPNL|ENSG00000144488.10|espin-like
hg19_v2_chr6_+_90272027_90272120	0.0208228	SMAD4	ENST00000522441.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chrX_-_70474499_70474564	0.0207825	SMAD4	ENST00000353904.2|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chrX_+_54947229_54947284	0.0207296	SMAD4	ENST00000442098.1|TRO|ENSG00000067445.16|trophinin 	ENST00000430420.1|TRO|ENSG00000067445.16|trophinin 	ENST00000453081.1|TRO|ENSG00000067445.16|trophinin 	ENST00000173898.7|TRO|ENSG00000067445.16|trophinin 	ENST00000319167.8|TRO|ENSG00000067445.16|trophinin 	ENST00000375022.4|TRO|ENSG00000067445.16|trophinin 	ENST00000399736.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440072.1|TRO|ENSG00000067445.16|trophinin 	ENST00000420798.2|TRO|ENSG00000067445.16|trophinin 	ENST00000431115.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440759.1|TRO|ENSG00000067445.16|trophinin 	ENST00000375041.2|TRO|ENSG00000067445.16|trophinin
hg19_v2_chr4_-_111563076_111563172	0.0205975	SMAD4	ENST00000354925.2|PITX2|ENSG00000164093.11|paired-like homeodomain 2 	ENST00000511990.1|PITX2|ENSG00000164093.11|paired-like homeodomain 2
hg19_v2_chr1_-_172413226_172413248	0.0205607	SMAD4	ENST00000367728.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C 	ENST00000258324.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr20_+_30407105_30407116	0.0201291	SMAD4	ENST00000375994.2|MYLK2|ENSG00000101306.6|myosin light chain kinase 2
hg19_v2_chr6_-_53013620_53013644	0.0200413	SMAD4	ENST00000259803.7|GCM1|ENSG00000137270.10|glial cells missing homolog 1 (Drosophila)
hg19_v2_chr9_-_139948468_139948482	0.0200001	SMAD4	ENST00000312665.5|ENTPD2|ENSG00000054179.7|ectonucleoside triphosphate diphosphohydrolase 2
hg19_v2_chr11_-_65430251_65430399	0.0198741	SMAD4	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr2_-_158345462_158345480	0.0194994	SMAD4	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr11_-_111781554_111781584	0.0189377	SMAD4	ENST00000526167.1|CRYAB|ENSG00000109846.3|crystallin, alpha B 	ENST00000528961.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr14_-_21994525_21994634	0.0187452	SMAD4	ENST00000538754.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr1_-_151431674_151431691	0.0187414	SMAD4	ENST00000531094.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr14_+_23776024_23776105	0.0178286	SMAD4	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr1_+_61548374_61548426	0.0174247	SMAD4	ENST00000485903.2|NFIA|ENSG00000162599.11|nuclear factor I/A 	ENST00000371185.2|NFIA|ENSG00000162599.11|nuclear factor I/A 	ENST00000371184.2|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr6_-_41673552_41673678	0.0171655	SMAD4	ENST00000419574.1|TFEB|ENSG00000112561.13|transcription factor EB 	ENST00000445214.1|TFEB|ENSG00000112561.13|transcription factor EB
hg19_v2_chr11_-_111781610_111781617	0.0170697	SMAD4	ENST00000525823.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr19_+_13051206_13051244	0.0169069	SMAD4	ENST00000586760.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr8_-_29592736_29592744	0.0159804	SMAD4	ENST00000518623.1|LINC00589|ENSG00000251191.3|long intergenic non-protein coding RNA 589
hg19_v2_chr1_-_151431909_151431987	0.0159226	SMAD4	ENST00000361398.3|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain 	ENST00000271715.2|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr1_+_26146674_26146715	0.0157531	SMAD4	ENST00000525713.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000374301.3|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like
hg19_v2_chr17_-_40170506_40170551	0.0154843	SMAD4	ENST00000589773.1|DNAJC7|ENSG00000168259.10|DnaJ (Hsp40) homolog, subfamily C, member 7 	ENST00000590348.1|DNAJC7|ENSG00000168259.10|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v2_chr17_-_9929581_9929626	0.0152203	SMAD4	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr17_+_74536164_74536172	0.0150037	SMAD4	ENST00000586148.1|PRCD|ENSG00000214140.6|progressive rod-cone degeneration
hg19_v2_chr7_-_18067478_18067490	0.0148132	SMAD4	ENST00000506618.2|PRPS1L1|ENSG00000229937.4|phosphoribosyl pyrophosphate synthetase 1-like 1
hg19_v2_chr3_+_16216137_16216203	0.0146788	SMAD4	ENST00000339732.5|GALNT15|ENSG00000131386.13|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
hg19_v2_chr10_-_118032979_118033132	0.0145095	SMAD4	ENST00000355422.6|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr10_-_62704005_62704045	0.014436	SMAD4	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chrX_+_43036243_43036248	0.0143733	SMAD4	ENST00000440955.1|RP3-326I13.1|ENSG00000224294.1|RP3-326I13.1
hg19_v2_chrX_-_140271249_140271333	0.0143702	SMAD4	ENST00000370526.2|LDOC1|ENSG00000182195.6|leucine zipper, down-regulated in cancer 1
hg19_v2_chr3_-_114477962_114478118	0.0142549	SMAD4	ENST00000471418.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr9_-_113341985_113342040	0.0140417	SMAD4	ENST00000374469.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chrX_-_50557014_50557060	0.013896	SMAD4	ENST00000376020.2|SHROOM4|ENSG00000158352.11|shroom family member 4
hg19_v2_chr5_+_55033845_55033870	0.0131539	SMAD4	ENST00000353507.5|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000514278.2|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000505374.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 	ENST00000506511.1|DDX4|ENSG00000152670.14|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v2_chr11_-_8739383_8739489	0.0129012	SMAD4	ENST00000531060.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr1_-_43751230_43751274	0.0127117	SMAD4	ENST00000523677.1|C1orf210|ENSG00000253313.1|chromosome 1 open reading frame 210
hg19_v2_chr2_+_218990727_218990757	0.0127099	SMAD4	ENST00000318507.2|CXCR2|ENSG00000180871.3|chemokine (C-X-C motif) receptor 2 	ENST00000454148.1|CXCR2|ENSG00000180871.3|chemokine (C-X-C motif) receptor 2
hg19_v2_chr5_-_168727713_168727755	0.0125458	SMAD4	ENST00000404867.3|SLIT3|ENSG00000184347.10|slit homolog 3 (Drosophila)
hg19_v2_chr12_-_53594227_53594242	0.012506	SMAD4	ENST00000550743.2|ITGB7|ENSG00000139626.11|integrin, beta 7
hg19_v2_chr3_+_45986511_45986570	0.012432	SMAD4	ENST00000458629.1|CXCR6|ENSG00000172215.5|chemokine (C-X-C motif) receptor 6 	ENST00000457814.1|CXCR6|ENSG00000172215.5|chemokine (C-X-C motif) receptor 6
hg19_v2_chr11_+_1411503_1411521	0.0124316	SMAD4	ENST00000526678.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr2_-_113594279_113594480	0.0121231	SMAD4	ENST00000416750.1|IL1B|ENSG00000125538.7|interleukin 1, beta 	ENST00000418817.1|IL1B|ENSG00000125538.7|interleukin 1, beta 	ENST00000263341.2|IL1B|ENSG00000125538.7|interleukin 1, beta
hg19_v2_chr6_+_134274322_134274342	0.012084	SMAD4	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr1_-_51796987_51797018	0.0119019	SMAD4	ENST00000262676.5|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr7_+_48128316_48128355	0.0117176	SMAD4	ENST00000341253.4|UPP1|ENSG00000183696.9|uridine phosphorylase 1
hg19_v2_chr1_-_11322551_11322583	0.0116382	SMAD4	ENST00000361445.4|MTOR|ENSG00000198793.8|mechanistic target of rapamycin (serine/threonine kinase)
hg19_v2_chr7_+_73442102_73442139	0.0114348	SMAD4	ENST00000445912.1|ELN|ENSG00000049540.12|elastin 	ENST00000252034.7|ELN|ENSG00000049540.12|elastin
hg19_v2_chr2_+_233385173_233385201	0.0113308	SMAD4	ENST00000449534.2|PRSS56|ENSG00000237412.2|protease, serine, 56
hg19_v2_chr4_+_30721968_30722037	0.0111341	SMAD4	ENST00000361762.2|PCDH7|ENSG00000169851.11|protocadherin 7
hg19_v2_chr1_-_41707778_41707822	0.0110852	SMAD4	ENST00000337495.5|SCMH1|ENSG00000010803.12|sex comb on midleg homolog 1 (Drosophila) 	ENST00000372597.1|SCMH1|ENSG00000010803.12|sex comb on midleg homolog 1 (Drosophila) 	ENST00000372596.1|SCMH1|ENSG00000010803.12|sex comb on midleg homolog 1 (Drosophila)
hg19_v2_chr1_+_230193521_230193545	0.0110834	SMAD4	ENST00000543760.1|GALNT2|ENSG00000143641.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
hg19_v2_chr4_-_25162188_25162208	0.0107329	SMAD4	ENST00000302922.3|SEPSECS|ENSG00000109618.7|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
hg19_v2_chr12_-_49245936_49245955	0.0102454	SMAD4	ENST00000308025.3|DDX23|ENSG00000174243.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v2_chr18_-_60986962_60987019	0.0098124	SMAD4	ENST00000333681.4|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr13_+_102104952_102104966	0.00968847	SMAD4	ENST00000376180.3|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr17_-_19290117_19290245	0.00950119	SMAD4	ENST00000497081.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr17_-_20370847_20370848	0.00946708	SMAD4	ENST00000423676.3|LGALS9B|ENSG00000170298.11|lectin, galactoside-binding, soluble, 9B 	ENST00000324290.5|LGALS9B|ENSG00000170298.11|lectin, galactoside-binding, soluble, 9B
hg19_v2_chr17_-_4463856_4463896	0.0093136	SMAD4	ENST00000574584.1|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6 	ENST00000381550.3|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6 	ENST00000301395.3|GGT6|ENSG00000167741.6|gamma-glutamyltransferase 6
hg19_v2_chr10_+_94451574_94451612	0.00914437	SMAD4	ENST00000492654.2|HHEX|ENSG00000152804.6|hematopoietically expressed homeobox
hg19_v2_chr8_+_22844995_22845008	0.00890881	SMAD4	ENST00000524077.1|RHOBTB2|ENSG00000008853.12|Rho-related BTB domain containing 2
hg19_v2_chr2_+_87769459_87769476	0.00876885	SMAD4	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr12_-_99548524_99548550	0.00844288	SMAD4	ENST00000549558.2|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000550693.2|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000549493.2|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr19_-_47922373_47922572	0.00834443	SMAD4	ENST00000559524.1|MEIS3|ENSG00000105419.13|Meis homeobox 3 	ENST00000557833.1|MEIS3|ENSG00000105419.13|Meis homeobox 3 	ENST00000558555.1|MEIS3|ENSG00000105419.13|Meis homeobox 3 	ENST00000561293.1|MEIS3|ENSG00000105419.13|Meis homeobox 3 	ENST00000441740.2|MEIS3|ENSG00000105419.13|Meis homeobox 3
hg19_v2_chr11_-_18062335_18062335	0.00828953	SMAD4	ENST00000341556.2|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr16_-_21416640_21416640	0.00827902	SMAD4	ENST00000542817.1|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr8_-_128960591_128960591	0.00811614	SMAD4	ENST00000539634.1|TMEM75|ENSG00000256655.1|transmembrane protein 75
hg19_v2_chr9_+_82187487_82187557	0.00800528	SMAD4	ENST00000435650.1|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000414465.1|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376537.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376534.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr5_+_75378997_75379080	0.00775347	SMAD4	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr16_-_21436459_21436643	0.00772845	SMAD4	ENST00000448012.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000504841.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000419180.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr7_-_99699538_99699563	0.00720728	SMAD4	ENST00000343023.6|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7 	ENST00000303887.5|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7
hg19_v2_chr11_+_57308979_57308979	0.00717739	SMAD4	ENST00000457912.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr16_+_67678818_67678848	0.00696428	SMAD4	ENST00000334583.6|RLTPR|ENSG00000159753.9|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing
hg19_v2_chr22_+_20067738_20067771	0.00689185	SMAD4	ENST00000351989.3|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit 	ENST00000383024.2|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit
hg19_v2_chr14_-_23284675_23284684	0.0068096	SMAD4	ENST00000555959.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr3_-_106959424_106959518	0.00670042	SMAD4	ENST00000607801.1|LINC00882|ENSG00000242759.2|long intergenic non-protein coding RNA 882 	ENST00000479612.2|LINC00882|ENSG00000242759.2|long intergenic non-protein coding RNA 882 	ENST00000484698.1|LINC00882|ENSG00000242759.2|long intergenic non-protein coding RNA 882 	ENST00000477210.2|LINC00882|ENSG00000242759.2|long intergenic non-protein coding RNA 882 	ENST00000473636.1|LINC00882|ENSG00000242759.2|long intergenic non-protein coding RNA 882
hg19_v2_chr7_-_135433534_135433594	0.00611131	SMAD4	ENST00000338588.3|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr6_+_41196077_41196088	0.00608287	SMAD4	ENST00000448827.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr11_-_107729287_107729310	0.00588739	SMAD4	ENST00000375682.4|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr3_+_184016986_184017055	0.00587529	SMAD4	ENST00000417952.1|PSMD2|ENSG00000175166.12|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
hg19_v2_chr1_+_156589051_156589089	0.00584572	SMAD4	ENST00000255039.1|HAPLN2|ENSG00000132702.8|hyaluronan and proteoglycan link protein 2
hg19_v2_chr11_+_35211511_35211557	0.00584555	SMAD4	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr9_+_82187630_82187722	0.00541596	SMAD4	ENST00000265284.6|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr3_+_57994127_57994156	0.0051996	SMAD4	ENST00000490882.1|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000295956.4|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000358537.3|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000429972.2|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000348383.5|FLNB|ENSG00000136068.10|filamin B, beta 	ENST00000357272.4|FLNB|ENSG00000136068.10|filamin B, beta
hg19_v2_chr18_+_20714525_20714534	0.00519728	SMAD4	ENST00000400473.2|CABLES1|ENSG00000134508.8|Cdk5 and Abl enzyme substrate 1
hg19_v2_chr15_-_83240783_83240846	0.00510431	SMAD4	ENST00000568994.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr9_-_97090926_97090926	0.00499671	SMAD4	ENST00000335456.7|NUTM2F|ENSG00000130950.9|NUT family member 2F 	ENST00000253262.4|NUTM2F|ENSG00000130950.9|NUT family member 2F 	ENST00000341207.4|NUTM2F|ENSG00000130950.9|NUT family member 2F
hg19_v2_chrX_-_153744434_153744492	0.00497401	SMAD4	ENST00000369643.1|FAM3A|ENSG00000071889.12|family with sequence similarity 3, member A 	ENST00000393572.1|FAM3A|ENSG00000071889.12|family with sequence similarity 3, member A
hg19_v2_chr3_-_164913777_164913790	0.00486983	SMAD4	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr17_-_3499125_3499125	0.00480533	SMAD4	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr9_+_75263565_75263565	0.00472859	SMAD4	ENST00000396237.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr17_-_1549011_1549041	0.00434806	SMAD4	ENST00000571272.1|SCARF1|ENSG00000074660.11|scavenger receptor class F, member 1 	ENST00000263071.4|SCARF1|ENSG00000074660.11|scavenger receptor class F, member 1 	ENST00000348987.3|SCARF1|ENSG00000074660.11|scavenger receptor class F, member 1
hg19_v2_chr12_+_101188547_101188585	0.00399713	SMAD4	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr19_+_10765699_10765728	0.00379117	SMAD4	ENST00000590009.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr3_+_23847394_23847423	0.00377274	SMAD4	ENST00000306627.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr4_+_62066941_62066992	0.00362767	SMAD4	ENST00000512091.2|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr8_+_58055238_58055262	0.00311997	SMAD4	ENST00000519314.1|RP11-513O17.2|ENSG00000253301.1|RP11-513O17.2	ENST00000519241.1|RP11-513O17.2|ENSG00000253301.1|RP11-513O17.2
hg19_v2_chr5_-_124080203_124080258	0.00257819	SMAD4	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr2_+_239009020_239009061	0.00257513	SMAD4	ENST00000409169.1|ESPNL|ENSG00000144488.10|espin-like
hg19_v2_chrX_-_70128554_70128574	0.00239669	SMAD4	ENST00000395889.2|TEX11|ENSG00000120498.9|testis expressed 11
hg19_v2_chr10_-_69455873_69455960	0.00207444	SMAD4	ENST00000433211.2|CTNNA3|ENSG00000183230.12|catenin (cadherin-associated protein), alpha 3
hg19_v2_chr19_-_45926739_45926863	0.00206484	SMAD4	ENST00000589381.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000591636.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000013807.5|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000592023.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
hg19_v2_chr11_-_18747727_18747737	0.001844	SMAD4	ENST00000513874.1|IGSF22|ENSG00000179057.9|immunoglobulin superfamily, member 22
hg19_v2_chr1_-_161208013_161208092	0.00182582	SMAD4	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr19_+_5904866_5904896	0.0017278	SMAD4	ENST00000339485.3|VMAC|ENSG00000187650.3|vimentin-type intermediate filament associated coiled-coil protein
hg19_v2_chr7_+_135242652_135242689	0.00118392	SMAD4	ENST00000285968.6|NUP205|ENSG00000155561.10|nucleoporin 205kDa 	ENST00000440390.2|NUP205|ENSG00000155561.10|nucleoporin 205kDa
hg19_v2_chr15_-_45670717_45670750	0.000733688	SMAD4	ENST00000558163.1|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase) 	ENST00000558336.1|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr20_-_43729750_43729774	0.000657968	SMAD4	ENST00000537075.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 	ENST00000306117.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
