hg19_v2_chr12_+_6949964_6950138	0.0969811	PITX2	ENST00000541978.1|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3 	ENST00000435982.2|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3
hg19_v2_chr3_+_119421849_119421962	0.0432135	PITX2	ENST00000273390.5|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1 	ENST00000463700.1|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1
hg19_v2_chr1_+_2407754_2407773	0.0382198	PITX2	ENST00000419816.2|PLCH2|ENSG00000149527.13|phospholipase C, eta 2 	ENST00000378486.3|PLCH2|ENSG00000149527.13|phospholipase C, eta 2 	ENST00000378488.3|PLCH2|ENSG00000149527.13|phospholipase C, eta 2 	ENST00000288766.5|PLCH2|ENSG00000149527.13|phospholipase C, eta 2
hg19_v2_chr15_-_89764929_89764982	0.0379935	PITX2	ENST00000268125.5|RLBP1|ENSG00000140522.7|retinaldehyde binding protein 1
hg19_v2_chr9_-_98268883_98268947	0.0372541	PITX2	ENST00000551630.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000548420.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr17_-_10633535_10633633	0.0347648	PITX2	ENST00000341871.3|TMEM220|ENSG00000187824.4|transmembrane protein 220
hg19_v2_chr4_+_146560245_146560245	0.0321156	PITX2	ENST00000541599.1|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chrM_+_9207_9255	0.0306552	PITX2	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr21_-_34915084_34915099	0.0300757	PITX2	ENST00000426819.1|GART|ENSG00000159131.12|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
hg19_v2_chr13_+_73632897_73632930	0.0283362	PITX2	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr5_+_64920543_64920592	0.0274702	PITX2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr3_+_139062838_139062881	0.0256699	PITX2	ENST00000310776.4|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465056.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465373.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22
hg19_v2_chr4_-_76912070_76912118	0.0245681	PITX2	ENST00000395711.4|SDAD1|ENSG00000198301.7|SDA1 domain containing 1 	ENST00000356260.5|SDAD1|ENSG00000198301.7|SDA1 domain containing 1
hg19_v2_chr12_-_323689_323719	0.0232084	PITX2	ENST00000428720.1|SLC6A12|ENSG00000111181.8|solute carrier family 6 (neurotransmitter transporter), member 12
hg19_v2_chr4_-_68620053_68620112	0.0225655	PITX2	ENST00000420975.2|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor 	ENST00000226413.4|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor
hg19_v2_chr13_-_36429763_36429779	0.0218802	PITX2	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr1_-_31230650_31230683	0.0209959	PITX2	ENST00000294507.3|LAPTM5|ENSG00000162511.7|lysosomal protein transmembrane 5
hg19_v2_chr12_+_7941989_7942014	0.0205584	PITX2	ENST00000229307.4|NANOG|ENSG00000111704.6|Nanog homeobox
hg19_v2_chr18_-_47017956_47018210	0.0201406	PITX2	ENST00000584895.1|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000332968.6|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000580210.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579408.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr7_+_73868220_73868300	0.020077	PITX2	ENST00000455841.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr7_+_73868439_73868450	0.0198446	PITX2	ENST00000424337.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr4_+_70916119_70916167	0.0171871	PITX2	ENST00000246896.3|HTN1|ENSG00000126550.4|histatin 1 	ENST00000511674.1|HTN1|ENSG00000126550.4|histatin 1
hg19_v2_chr15_+_41221536_41221591	0.0170034	PITX2	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr6_+_43215727_43215727	0.0166137	PITX2	ENST00000304139.5|TTBK1|ENSG00000146216.7|tau tubulin kinase 1
hg19_v2_chr9_+_34458851_34458908	0.0165848	PITX2	ENST00000545019.1|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1
hg19_v2_chr3_-_191000172_191000209	0.015829	PITX2	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr22_-_30234218_30234276	0.0157096	PITX2	ENST00000307790.3|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2 	ENST00000542393.1|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2 	ENST00000397771.2|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2
hg19_v2_chr9_+_34458771_34458850	0.0152803	PITX2	ENST00000437363.1|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1 	ENST00000242317.4|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1
hg19_v2_chr2_-_65659762_65659774	0.014821	PITX2	ENST00000440972.1|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chr12_-_53189892_53189905	0.0147947	PITX2	ENST00000309505.3|KRT3|ENSG00000186442.6|keratin 3 	ENST00000417996.2|KRT3|ENSG00000186442.6|keratin 3
hg19_v2_chr4_-_36245561_36245601	0.0139169	PITX2	ENST00000506189.1|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr6_-_111804905_111804921	0.0138279	PITX2	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr21_-_34915147_34915178	0.0134801	PITX2	ENST00000381831.3|GART|ENSG00000159131.12|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 	ENST00000381839.3|GART|ENSG00000159131.12|phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
hg19_v2_chr9_+_8858102_8858147	0.0130031	PITX2	ENST00000447950.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1	ENST00000430766.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1
hg19_v2_chr19_+_2476116_2476146	0.0128519	PITX2	ENST00000215631.4|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta 	ENST00000587345.1|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta
hg19_v2_chr16_-_12070468_12070510	0.0113653	PITX2	ENST00000538896.1|RP11-166B2.1|ENSG00000234719.4|Putative NPIP-like protein LOC729978
hg19_v2_chr16_+_28722684_28722807	0.0102015	PITX2	ENST00000331666.6|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000395587.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000569690.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C 	ENST00000564243.1|EIF3C|ENSG00000184110.10|eukaryotic translation initiation factor 3, subunit C
hg19_v2_chrX_-_21676442_21676453	0.00653062	PITX2	ENST00000379499.2|KLHL34|ENSG00000185915.4|kelch-like family member 34
hg19_v2_chr2_-_121223697_121223697	0.00649696	PITX2	ENST00000593290.1|FLJ14816|ENSG00000268194.1|long intergenic non-protein coding RNA 1101
hg19_v2_chr12_-_90049878_90049890	0.00647759	PITX2	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr6_+_130339710_130339745	0.00637128	PITX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr2_+_120770686_120770787	0.00614856	PITX2	ENST00000331393.4|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5 	ENST00000443124.1|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr11_-_119217365_119217398	0.00612863	PITX2	ENST00000360167.4|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000445041.2|C1QTNF5|ENSG00000223953.3|C1q and tumor necrosis factor related protein 5 	ENST00000555262.1|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000449574.2|MFRP|ENSG00000235718.3|membrane frizzled-related protein
hg19_v2_chr5_-_64920115_64920174	0.00609005	PITX2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr8_-_42360015_42360146	0.00563163	PITX2	ENST00000522707.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr17_+_4643337_4643345	0.0044571	PITX2	ENST00000592813.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr6_-_138893661_138893687	0.00370149	PITX2	ENST00000427025.2|NHSL1|ENSG00000135540.7|NHS-like 1
hg19_v2_chr2_+_3622893_3622925	0.00368704	PITX2	ENST00000407445.3|RPS7|ENSG00000171863.8|ribosomal protein S7 	ENST00000403564.1|RPS7|ENSG00000171863.8|ribosomal protein S7
hg19_v2_chr1_-_98515395_98515449	0.00355862	PITX2	ENST00000424528.2|MIR137HG|ENSG00000225206.4|MIR137 host gene (non-protein coding)
hg19_v2_chr6_+_35310391_35310410	0.00348055	PITX2	ENST00000337400.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000311565.4|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000540939.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr8_-_10512569_10512612	0.00272562	PITX2	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr2_+_120770645_120770669	0.00262341	PITX2	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr17_+_4643300_4643329	0.00156609	PITX2	ENST00000433935.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr6_-_41673552_41673678	0.00090955	PITX2	ENST00000419574.1|TFEB|ENSG00000112561.13|transcription factor EB 	ENST00000445214.1|TFEB|ENSG00000112561.13|transcription factor EB
hg19_v2_chr17_-_4643114_4643144	0.000206937	PITX2	ENST00000293778.6|CXCL16|ENSG00000161921.10|chemokine (C-X-C motif) ligand 16
