hg19_v2_chr6_+_24126350_24126497	1.23577	PAX8	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr11_-_9482010_9482185	0.783479	PAX8	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr20_-_36794938_36794980	0.688568	PAX8	ENST00000453095.1|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr6_-_27858570_27858611	0.6731	PAX8	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr11_+_59705928_59705928	0.587881	PAX8	ENST00000398992.1|OOSP1|ENSG00000214788.1|oocyte secreted protein 1
hg19_v2_chr21_+_45287112_45287123	0.524219	PAX8	ENST00000448287.1|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chr11_-_118272610_118272610	0.413511	PAX8	ENST00000534438.1|RP11-770J1.5|ENSG00000254873.1|Uncharacterized protein
hg19_v2_chr19_+_34891252_34891252	0.388007	PAX8	ENST00000606020.1|RP11-618P17.4|ENSG00000266953.2|Uncharacterized protein
hg19_v2_chr7_+_140396756_140396804	0.367556	PAX8	ENST00000460088.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000472695.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr22_-_44258360_44258402	0.351681	PAX8	ENST00000330884.4|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1 	ENST00000249130.5|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr3_-_107941209_107941227	0.350978	PAX8	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr7_+_140396946_140397024	0.338173	PAX8	ENST00000476470.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000471136.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr1_+_218683438_218683438	0.324339	PAX8	ENST00000443836.1|C1orf143|ENSG00000228208.2|chromosome 1 open reading frame 143
hg19_v2_chr2_+_90198535_90198535	0.298496	PAX8	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chr1_+_180165672_180165817	0.287857	PAX8	ENST00000443059.1|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr9_+_131549610_131549629	0.271737	PAX8	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr19_+_9361606_9361606	0.256513	PAX8	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr7_+_140396465_140396548	0.253653	PAX8	ENST00000476279.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000247866.4|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000461457.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000465506.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000204307.5|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000464566.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr6_-_44233361_44233500	0.251969	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr11_+_63742050_63742104	0.249852	PAX8	ENST00000314133.3|COX8A|ENSG00000176340.3|cytochrome c oxidase subunit VIIIA (ubiquitous) 	ENST00000535431.1|AP000721.4|ENSG00000256100.1|Uncharacterized protein
hg19_v2_chr19_-_55791431_55791508	0.240917	PAX8	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr10_-_128110441_128110456	0.238925	PAX8	ENST00000456514.1|LINC00601|ENSG00000235180.1|long intergenic non-protein coding RNA 601
hg19_v2_chr19_+_50169216_50169285	0.225031	PAX8	ENST00000594157.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000600947.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000598306.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr21_-_44582378_44582401	0.223896	PAX8	ENST00000433840.1|AP001631.10|ENSG00000228120.2|AP001631.10
hg19_v2_chr14_-_54425475_54425500	0.222879	PAX8	ENST00000559642.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr19_+_50169081_50169196	0.22286	PAX8	ENST00000246784.3|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr11_-_62609281_62609282	0.213878	PAX8	ENST00000525239.1|WDR74|ENSG00000133316.11|WD repeat domain 74 	ENST00000538098.2|WDR74|ENSG00000133316.11|WD repeat domain 74
hg19_v2_chr8_-_66474884_66475015	0.211944	PAX8	ENST00000520902.1|CTD-3025N20.2|ENSG00000254081.1|CTD-3025N20.2
hg19_v2_chr2_+_90192768_90192768	0.211702	PAX8	ENST00000390275.2|IGKV1D-13|ENSG00000211630.2|immunoglobulin kappa variable 1D-13
hg19_v2_chr19_-_55791540_55791549	0.205635	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr9_-_21228221_21228221	0.202681	PAX8	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr1_-_182573514_182573543	0.195799	PAX8	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr17_-_42100474_42100589	0.195097	PAX8	ENST00000585950.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000592127.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000589334.1|TMEM101|ENSG00000091947.5|transmembrane protein 101
hg19_v2_chr10_+_35484793_35484937	0.193996	PAX8	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr1_+_16083154_16083168	0.193792	PAX8	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr17_-_73505961_73505976	0.193084	PAX8	ENST00000433559.2|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr9_-_116837249_116837318	0.190714	PAX8	ENST00000466610.2|AMBP|ENSG00000106927.7|alpha-1-microglobulin/bikunin precursor
hg19_v2_chr1_-_153514241_153514241	0.185501	PAX8	ENST00000368718.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5 	ENST00000359215.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr9_-_128246769_128246780	0.18208	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr17_+_7461613_7461645	0.179136	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr1_+_171283331_171283373	0.173702	PAX8	ENST00000367749.3|FMO4|ENSG00000076258.5|flavin containing monooxygenase 4
hg19_v2_chr12_+_72058130_72058261	0.171455	PAX8	ENST00000547843.1|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr1_+_161494036_161494036	0.171035	PAX8	ENST00000309758.4|HSPA6|ENSG00000173110.6|heat shock 70kDa protein 6 (HSP70B')
hg19_v2_chr2_+_173724771_173724840	0.160048	PAX8	ENST00000538974.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4 	ENST00000540783.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr1_+_16083098_16083119	0.153973	PAX8	ENST00000496928.2|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000508310.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr16_-_87350970_87351006	0.152333	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chr3_-_112329110_112329127	0.148352	PAX8	ENST00000479368.1|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr19_-_36019123_36019253	0.147419	PAX8	ENST00000588674.1|SBSN|ENSG00000189001.6|suprabasin 	ENST00000452271.2|SBSN|ENSG00000189001.6|suprabasin 	ENST00000518157.1|SBSN|ENSG00000189001.6|suprabasin
hg19_v2_chr9_+_124048864_124048892	0.146869	PAX8	ENST00000545652.1|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr3_-_137851220_137851236	0.144082	PAX8	ENST00000236709.3|A4GNT|ENSG00000118017.3|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr1_-_8585945_8586056	0.143496	PAX8	ENST00000377464.1|RERE|ENSG00000142599.13|arginine-glutamic acid dipeptide (RE) repeats
hg19_v2_chr11_-_62457371_62457371	0.141733	PAX8	ENST00000317449.4|LRRN4CL|ENSG00000177363.4|LRRN4 C-terminal like
hg19_v2_chr2_-_128615517_128615523	0.135244	PAX8	ENST00000409698.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr9_-_92020841_92020885	0.134029	PAX8	ENST00000433650.1|SEMA4D|ENSG00000187764.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
hg19_v2_chr13_+_31309645_31309726	0.133037	PAX8	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chr19_+_41856816_41856871	0.132308	PAX8	ENST00000539627.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr1_+_16083123_16083144	0.128778	PAX8	ENST00000510393.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1 	ENST00000430076.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr18_-_58040000_58040015	0.127669	PAX8	ENST00000299766.3|MC4R|ENSG00000166603.3|melanocortin 4 receptor
hg19_v2_chr1_-_20755140_20755275	0.127384	PAX8	ENST00000418743.1|RP4-749H3.1|ENSG00000236963.1|long intergenic non-protein coding RNA 1141 	ENST00000426428.1|RP4-749H3.1|ENSG00000236963.1|long intergenic non-protein coding RNA 1141
hg19_v2_chr19_+_35939154_35939203	0.125211	PAX8	ENST00000599180.2|FFAR2|ENSG00000126262.4|free fatty acid receptor 2
hg19_v2_chr20_+_4152356_4152363	0.114759	PAX8	ENST00000379460.2|SMOX|ENSG00000088826.13|spermine oxidase
hg19_v2_chr1_+_154300217_154300276	0.11168	PAX8	ENST00000368489.3|ATP8B2|ENSG00000143515.12|ATPase, aminophospholipid transporter, class I, type 8B, member 2
hg19_v2_chr19_+_17337473_17337549	0.110488	PAX8	ENST00000598068.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr5_-_140027357_140027370	0.109077	PAX8	ENST00000252102.4|NDUFA2|ENSG00000131495.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
hg19_v2_chr12_-_123201337_123201439	0.107538	PAX8	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr7_-_144533074_144533153	0.106948	PAX8	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr11_+_67055986_67056054	0.106829	PAX8	ENST00000447274.2|ANKRD13D|ENSG00000172932.10|ankyrin repeat domain 13 family, member D
hg19_v2_chr17_-_73267304_73267328	0.106694	PAX8	ENST00000579297.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000580571.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr20_-_3762087_3762100	0.104482	PAX8	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chr16_-_18911366_18911366	0.104441	PAX8	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr2_+_161993465_161993481	0.101949	PAX8	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr17_-_73266616_73266702	0.100601	PAX8	ENST00000579194.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000581777.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr7_+_90012986_90013035	0.0987754	PAX8	ENST00000416322.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr4_-_23735183_23735202	0.0984587	PAX8	ENST00000507666.1|RP11-380P13.2|ENSG00000251292.1|RP11-380P13.2
hg19_v2_chr2_+_38177575_38177612	0.0971544	PAX8	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr19_-_51487282_51487346	0.0960251	PAX8	ENST00000595820.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000597707.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000336317.4|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7
hg19_v2_chr8_+_124429006_124429076	0.0956181	PAX8	ENST00000522194.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523356.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr19_+_40476912_40476939	0.0943977	PAX8	ENST00000157812.2|PSMC4|ENSG00000013275.3|proteasome (prosome, macropain) 26S subunit, ATPase, 4
hg19_v2_chr16_+_318638_318726	0.0943644	PAX8	ENST00000412541.1|ARHGDIG|ENSG00000242173.4|Rho GDP dissociation inhibitor (GDI) gamma 	ENST00000435035.1|ARHGDIG|ENSG00000242173.4|Rho GDP dissociation inhibitor (GDI) gamma
hg19_v2_chr8_+_21915368_21915399	0.0934415	PAX8	ENST00000265800.5|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000517418.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr12_-_110883346_110883392	0.0928663	PAX8	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr11_-_129062093_129062184	0.0918113	PAX8	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr14_-_91710852_91710893	0.0917037	PAX8	ENST00000535815.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000529102.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr5_-_176943917_176943943	0.0903987	PAX8	ENST00000330503.7|DDX41|ENSG00000183258.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
hg19_v2_chr16_-_30773372_30773449	0.0901244	PAX8	ENST00000545825.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93 	ENST00000541260.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93
hg19_v2_chr18_-_21017817_21017948	0.0896778	PAX8	ENST00000542162.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000383233.3|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000582336.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000450466.2|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000578520.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000399707.1|TMEM241|ENSG00000134490.9|transmembrane protein 241
hg19_v2_chr4_+_72204755_72204778	0.0895842	PAX8	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr16_+_2083265_2083303	0.088855	PAX8	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr1_-_25256368_25256476	0.0865899	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr16_+_57496299_57496299	0.0852311	PAX8	ENST00000219252.5|POLR2C|ENSG00000102978.8|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v2_chr1_-_71513471_71513506	0.0851483	PAX8	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr4_-_75695366_75695366	0.0847263	PAX8	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chr19_+_782755_782833	0.0844778	PAX8	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr15_+_45028520_45028560	0.0844134	PAX8	ENST00000329464.4|TRIM69|ENSG00000185880.8|tripartite motif containing 69
hg19_v2_chr1_+_160321120_160321130	0.083743	PAX8	ENST00000424754.1|NCSTN|ENSG00000162736.11|nicastrin
hg19_v2_chr19_+_54704610_54704683	0.083645	PAX8	ENST00000302907.4|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr6_+_167704838_167704952	0.0833732	PAX8	ENST00000366829.2|UNC93A|ENSG00000112494.5|unc-93 homolog A (C. elegans)
hg19_v2_chr18_-_53068782_53068902	0.082265	PAX8	ENST00000569012.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr19_+_54704718_54704742	0.0818113	PAX8	ENST00000391752.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000402367.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000391751.3|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr17_-_34257771_34257786	0.0815419	PAX8	ENST00000394529.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000293273.6|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr17_+_48624450_48624571	0.0814643	PAX8	ENST00000006658.6|SPATA20|ENSG00000006282.15|spermatogenesis associated 20 	ENST00000356488.4|SPATA20|ENSG00000006282.15|spermatogenesis associated 20 	ENST00000393244.3|SPATA20|ENSG00000006282.15|spermatogenesis associated 20
hg19_v2_chr22_-_20138302_20138399	0.0804606	PAX8	ENST00000540078.1|AC006547.14|ENSG00000234409.4|uncharacterized protein LOC388849  	ENST00000439765.2|AC006547.14|ENSG00000234409.4|uncharacterized protein LOC388849
hg19_v2_chr6_-_31628512_31628566	0.0802803	PAX8	ENST00000375911.1|C6orf47|ENSG00000204439.3|chromosome 6 open reading frame 47
hg19_v2_chr17_+_1933404_1933457	0.079176	PAX8	ENST00000263083.6|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1 	ENST00000571418.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr13_+_27844464_27844464	0.0789007	PAX8	ENST00000241463.4|RASL11A|ENSG00000122035.6|RAS-like, family 11, member A
hg19_v2_chr2_-_106013400_106013438	0.0788103	PAX8	ENST00000409807.1|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr17_-_19648916_19648993	0.0786075	PAX8	ENST00000444455.1|ALDH3A1|ENSG00000108602.13|aldehyde dehydrogenase 3 family, member A1 	ENST00000439102.2|ALDH3A1|ENSG00000108602.13|aldehyde dehydrogenase 3 family, member A1
hg19_v2_chr12_+_128399965_128400017	0.0785527	PAX8	ENST00000540882.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507 	ENST00000542089.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr7_-_76255444_76255444	0.0782518	PAX8	ENST00000454397.1|POMZP3|ENSG00000146707.10|POM121 and ZP3 fusion
hg19_v2_chr12_-_6960407_6960464	0.0782167	PAX8	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr11_-_2170786_2170833	0.0772472	PAX8	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr5_+_140235469_140235634	0.0770617	PAX8	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr17_+_7461849_7461914	0.075441	PAX8	ENST00000338784.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr19_-_7812446_7812473	0.0746601	PAX8	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr19_-_50168962_50169062	0.074616	PAX8	ENST00000599223.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593922.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600022.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596765.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000599144.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596822.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598108.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601373.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000595034.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601291.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr3_-_150264272_150264428	0.073265	PAX8	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr17_+_7462103_7462110	0.0721423	PAX8	ENST00000396545.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr19_-_55791563_55791749	0.0709343	PAX8	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr6_-_134639180_134639220	0.0681576	PAX8	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr20_-_1373682_1373709	0.0677802	PAX8	ENST00000381724.3|FKBP1A|ENSG00000088832.10|FK506 binding protein 1A, 12kDa
hg19_v2_chr19_+_17865011_17865123	0.0668591	PAX8	ENST00000596462.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596865.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598960.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000539407.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr1_+_155006300_155006446	0.0668223	PAX8	ENST00000295542.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000392480.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000423025.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000368419.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1
hg19_v2_chr10_+_12391685_12391734	0.0665886	PAX8	ENST00000378845.1|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr4_-_10686475_10686490	0.0659988	PAX8	ENST00000226951.6|CLNK|ENSG00000109684.10|cytokine-dependent hematopoietic cell linker
hg19_v2_chr12_+_128399917_128399958	0.0658804	PAX8	ENST00000544645.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr6_+_161123270_161123278	0.0654388	PAX8	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr16_-_31519691_31519734	0.0651072	PAX8	ENST00000567994.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000430477.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000570164.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000327237.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58
hg19_v2_chr19_+_52901094_52901134	0.0637452	PAX8	ENST00000391788.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000436397.1|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000391787.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000360465.3|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000494167.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000493272.1|ZNF528|ENSG00000167555.9|zinc finger protein 528
hg19_v2_chrX_-_84363974_84364054	0.0634952	PAX8	ENST00000395409.3|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1 	ENST00000332921.5|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1 	ENST00000509231.1|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1
hg19_v2_chr3_-_49158218_49158264	0.0621878	PAX8	ENST00000417901.1|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000306026.5|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000434032.2|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19
hg19_v2_chr12_-_129308487_129308588	0.062037	PAX8	ENST00000266771.5|SLC15A4|ENSG00000139370.6|solute carrier family 15 (oligopeptide transporter), member 4
hg19_v2_chr6_+_167704798_167704811	0.0616664	PAX8	ENST00000230256.3|UNC93A|ENSG00000112494.5|unc-93 homolog A (C. elegans)
hg19_v2_chr18_-_29264467_29264551	0.0616247	PAX8	ENST00000383131.3|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 	ENST00000237019.7|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr3_-_178969403_178969418	0.0611321	PAX8	ENST00000314235.5|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000392685.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr17_-_67057114_67057136	0.0597043	PAX8	ENST00000370732.2|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr6_+_30844192_30844221	0.0580631	PAX8	ENST00000502955.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000505066.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr12_+_122516626_122516645	0.0576262	PAX8	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr17_+_6918093_6918139	0.0568167	PAX8	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr2_+_85661918_85661918	0.0562997	PAX8	ENST00000340326.2|SH2D6|ENSG00000152292.12|SH2 domain containing 6
hg19_v2_chr3_-_49158312_49158373	0.0561398	PAX8	ENST00000398892.3|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000453664.1|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000398888.2|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19
hg19_v2_chr20_+_58571419_58571449	0.0560618	PAX8	ENST00000244049.3|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000350849.6|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000456106.1|CDH26|ENSG00000124215.12|cadherin 26
hg19_v2_chr6_+_135502408_135502459	0.055808	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr5_+_69321074_69321200	0.0551775	PAX8	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr19_-_7812397_7812426	0.0549259	PAX8	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr7_+_95115210_95115217	0.0547587	PAX8	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr2_-_37068530_37068530	0.0546932	PAX8	ENST00000593798.1|AC007382.1|ENSG00000268688.1|Uncharacterized protein
hg19_v2_chr1_+_367640_367640	0.0540955	PAX8	ENST00000426406.1|OR4F29|ENSG00000235249.1|olfactory receptor, family 4, subfamily F, member 29
hg19_v2_chr17_-_73267214_73267277	0.0530901	PAX8	ENST00000580717.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000577542.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000579612.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000245551.5|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr9_+_42704004_42704004	0.0530828	PAX8	ENST00000457288.1|CBWD7|ENSG00000215126.6|COBW domain containing 7
hg19_v2_chr11_+_65292538_65292606	0.0520317	PAX8	ENST00000270176.5|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000525364.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000420247.2|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000533862.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000279270.6|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000524944.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae)
hg19_v2_chr17_-_67057203_67057228	0.0516624	PAX8	ENST00000340001.4|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr2_+_219524473_219524495	0.0493992	PAX8	ENST00000439945.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000431802.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr8_-_124741451_124741493	0.0492667	PAX8	ENST00000520519.1|ANXA13|ENSG00000104537.12|annexin A13
hg19_v2_chr22_-_31324215_31324215	0.0488734	PAX8	ENST00000429468.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr8_-_121825088_121825094	0.0486909	PAX8	ENST00000520717.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr7_-_112430647_112430776	0.0480334	PAX8	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr17_-_80017856_80017970	0.047308	PAX8	ENST00000577574.1|DUS1L|ENSG00000169718.13|dihydrouridine synthase 1-like (S. cerevisiae)
hg19_v2_chr7_-_128001658_128001749	0.0468432	PAX8	ENST00000489835.2|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000464607.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000489517.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000446477.2|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000535159.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000435512.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4 	ENST00000495931.1|PRRT4|ENSG00000224940.4|proline-rich transmembrane protein 4
hg19_v2_chr21_-_43816052_43816116	0.0465866	PAX8	ENST00000398405.1|TMPRSS3|ENSG00000160183.9|transmembrane protease, serine 3
hg19_v2_chr19_-_35992780_35992815	0.0461455	PAX8	ENST00000593342.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000601650.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000408915.2|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr19_+_42041860_42041936	0.0457858	PAX8	ENST00000483481.2|AC006129.4|ENSG00000270164.1|AC006129.4	ENST00000494375.2|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr13_-_103426112_103426164	0.044588	PAX8	ENST00000376032.4|TEX30|ENSG00000151287.12|testis expressed 30 	ENST00000376029.3|TEX30|ENSG00000151287.12|testis expressed 30
hg19_v2_chr12_-_6961050_6961230	0.0445484	PAX8	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr16_+_75690093_75690122	0.0435639	PAX8	ENST00000564671.2|TERF2IP|ENSG00000166848.5|telomeric repeat binding factor 2, interacting protein
hg19_v2_chr17_-_8301132_8301150	0.0430402	PAX8	ENST00000399398.2|RNF222|ENSG00000189051.5|ring finger protein 222
hg19_v2_chrX_-_23926004_23926072	0.0427695	PAX8	ENST00000379226.4|APOO|ENSG00000184831.9|apolipoprotein O 	ENST00000379220.3|APOO|ENSG00000184831.9|apolipoprotein O
hg19_v2_chr17_-_3499125_3499125	0.0422676	PAX8	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr17_-_73267281_73267299	0.0420012	PAX8	ENST00000578305.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000325102.8|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr18_-_53068940_53068951	0.0414898	PAX8	ENST00000562638.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr17_-_60883993_60884014	0.0389322	PAX8	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr4_+_118955500_118955612	0.0386123	PAX8	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr5_+_148521136_148521177	0.0370653	PAX8	ENST00000506113.1|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr4_+_71600144_71600159	0.0366498	PAX8	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr19_+_35417939_35417963	0.0352372	PAX8	ENST00000601142.1|ZNF30|ENSG00000168661.10|zinc finger protein 30 	ENST00000426813.2|ZNF30|ENSG00000168661.10|zinc finger protein 30
hg19_v2_chr10_-_5638048_5638094	0.0349395	PAX8	ENST00000478294.1|RP13-463N16.6|ENSG00000242147.1|RP13-463N16.6
hg19_v2_chrM_+_4431_4475	0.0345525	PAX8	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr4_-_69536346_69536371	0.0345029	PAX8	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr11_+_20044600_20044636	0.0339598	PAX8	ENST00000311043.8|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr3_+_186435137_186435158	0.0338633	PAX8	ENST00000447445.1|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr5_-_156390230_156390266	0.0324044	PAX8	ENST00000407087.3|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4 	ENST00000274532.2|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4
hg19_v2_chr4_-_128887069_128887144	0.0311972	PAX8	ENST00000541133.1|MFSD8|ENSG00000164073.5|major facilitator superfamily domain containing 8 	ENST00000296468.3|MFSD8|ENSG00000164073.5|major facilitator superfamily domain containing 8 	ENST00000513559.1|MFSD8|ENSG00000164073.5|major facilitator superfamily domain containing 8
hg19_v2_chr4_+_69681710_69681716	0.0291129	PAX8	ENST00000265403.7|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10 	ENST00000458688.2|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10
hg19_v2_chr2_-_106013207_106013242	0.0286153	PAX8	ENST00000447958.1|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr1_+_41448820_41448833	0.0279334	PAX8	ENST00000372616.1|CTPS1|ENSG00000171793.9|CTP synthase 1
hg19_v2_chr17_-_74023291_74023312	0.0270644	PAX8	ENST00000586740.1|EVPL|ENSG00000167880.3|envoplakin
hg19_v2_chr6_+_135502466_135502489	0.0268882	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr11_+_20044096_20044116	0.0266682	PAX8	ENST00000533917.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr8_+_124428959_124428971	0.0266012	PAX8	ENST00000287387.2|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523984.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr17_+_5031687_5031687	0.0262953	PAX8	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr12_-_11287243_11287243	0.0254951	PAX8	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr3_-_8811288_8811314	0.0254892	PAX8	ENST00000316793.3|OXTR|ENSG00000180914.6|oxytocin receptor 	ENST00000431493.1|OXTR|ENSG00000180914.6|oxytocin receptor
hg19_v2_chr2_+_171036635_171036673	0.0252845	PAX8	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr6_+_147527103_147527118	0.0248556	PAX8	ENST00000179882.6|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr22_-_50523688_50523719	0.0241922	PAX8	ENST00000450140.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr10_+_70847852_70847874	0.02383	PAX8	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr15_-_60683326_60683496	0.0236841	PAX8	ENST00000559350.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560389.1|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr11_-_58343319_58343338	0.023419	PAX8	ENST00000395074.2|LPXN|ENSG00000110031.8|leupaxin
hg19_v2_chr7_-_47520869_47520899	0.022722	PAX8	ENST00000415929.1|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr11_+_60609537_60609567	0.0225541	PAX8	ENST00000227520.5|CCDC86|ENSG00000110104.7|coiled-coil domain containing 86
hg19_v2_chr6_+_31126291_31126399	0.0223186	PAX8	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr3_+_186435065_186435126	0.0220453	PAX8	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr6_-_51952367_51952416	0.0219608	PAX8	ENST00000340994.4|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr8_-_66546373_66546428	0.0212068	PAX8	ENST00000518908.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000458464.2|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000519352.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr1_+_145293371_145293371	0.0211209	PAX8	ENST00000342960.5|NBPF10|ENSG00000163386.16|neuroblastoma breakpoint family, member 10
hg19_v2_chr7_+_129984630_129984701	0.0210758	PAX8	ENST00000355388.3|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000497503.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000463587.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000461828.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000494311.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000466363.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000485477.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000431780.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000474905.1|CPA5|ENSG00000158525.11|carboxypeptidase A5
hg19_v2_chr19_+_16296191_16296266	0.0203181	PAX8	ENST00000589852.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000263384.7|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000588367.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000587351.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A
hg19_v2_chr3_+_125694347_125694467	0.0197152	PAX8	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr8_+_27168988_27169021	0.0189127	PAX8	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr1_+_197382957_197382964	0.01891	PAX8	ENST00000367397.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr1_-_119682812_119682947	0.0182968	PAX8	ENST00000537870.1|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr1_-_173176452_173176477	0.0181661	PAX8	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chrX_-_153141434_153141509	0.016768	PAX8	ENST00000407935.2|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000439496.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr2_-_179672142_179672157	0.0165624	PAX8	ENST00000342992.6|TTN|ENSG00000155657.19|titin 	ENST00000360870.5|TTN|ENSG00000155657.19|titin 	ENST00000460472.2|TTN|ENSG00000155657.19|titin 	ENST00000589042.1|TTN|ENSG00000155657.19|titin 	ENST00000591111.1|TTN|ENSG00000155657.19|titin 	ENST00000342175.6|TTN|ENSG00000155657.19|titin 	ENST00000359218.5|TTN|ENSG00000155657.19|titin
hg19_v2_chr3_+_130279178_130279178	0.0153676	PAX8	ENST00000358511.6|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6 	ENST00000453409.2|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6
hg19_v2_chr1_+_15943995_15944014	0.0151075	PAX8	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr19_-_50169064_50169132	0.0136579	PAX8	ENST00000593337.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598808.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600453.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593818.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000597198.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601809.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000377139.3|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr1_-_21059029_21059330	0.0136056	PAX8	ENST00000444387.2|SH2D5|ENSG00000189410.7|SH2 domain containing 5 	ENST00000375031.1|SH2D5|ENSG00000189410.7|SH2 domain containing 5 	ENST00000518294.1|SH2D5|ENSG00000189410.7|SH2 domain containing 5
hg19_v2_chr15_+_89631647_89631725	0.0135824	PAX8	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chrX_-_153141302_153141399	0.0134076	PAX8	ENST00000361699.4|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000543994.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000370057.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000538883.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000361981.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr8_-_66546439_66546451	0.0133766	PAX8	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr1_-_157522260_157522315	0.0133409	PAX8	ENST00000368191.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000361835.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5
hg19_v2_chr12_+_19592602_19592648	0.0130901	PAX8	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr13_-_95131923_95131944	0.0120844	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr4_+_71600063_71600134	0.0119277	PAX8	ENST00000513597.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr18_-_53068911_53068935	0.0119276	PAX8	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr10_+_24544249_24544276	0.0119192	PAX8	ENST00000430453.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr13_+_24844857_24844930	0.0116002	PAX8	ENST00000409126.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000343003.6|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr18_+_43405471_43405485	0.0109189	PAX8	ENST00000389474.3|SIGLEC15|ENSG00000197046.7|sialic acid binding Ig-like lectin 15
hg19_v2_chr2_-_128615681_128615737	0.00987343	PAX8	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr4_-_168155169_168155214	0.00985855	PAX8	ENST00000534949.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000535728.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr17_-_34257731_34257766	0.0097809	PAX8	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr9_+_111624577_111624603	0.00880927	PAX8	ENST00000333999.3|ACTL7A|ENSG00000187003.5|actin-like 7A
hg19_v2_chr3_-_169587621_169587728	0.00832207	PAX8	ENST00000523069.1|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000316428.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000264676.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31
hg19_v2_chr17_+_79934670_79934683	0.00825094	PAX8	ENST00000581484.1|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr19_+_12862604_12862625	0.0080492	PAX8	ENST00000553030.1|BEST2|ENSG00000039987.2|bestrophin 2
hg19_v2_chr8_-_117043_117043	0.00724472	PAX8	ENST00000320901.3|OR4F21|ENSG00000176269.3|olfactory receptor, family 4, subfamily F, member 21
hg19_v2_chr7_+_75677354_75677459	0.00580817	PAX8	ENST00000461263.2|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000315758.5|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000443006.1|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial)
hg19_v2_chr13_+_24844979_24844994	0.0046857	PAX8	ENST00000454083.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr1_-_165668100_165668100	0.0045924	PAX8	ENST00000354775.4|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr1_-_11036272_11036272	0.00447492	PAX8	ENST00000520253.1|C1orf127|ENSG00000175262.10|chromosome 1 open reading frame 127
hg19_v2_chr4_+_154073469_154073645	0.00346298	PAX8	ENST00000441616.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr19_+_9938562_9938627	0.00225676	PAX8	ENST00000586895.1|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000358666.3|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000590068.1|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000593087.1|UBL5|ENSG00000198258.6|ubiquitin-like 5
hg19_v2_chr12_-_86650077_86650095	0.00105817	PAX8	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr17_+_7461781_7461820	0.000915727	PAX8	ENST00000349228.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr1_-_231004220_231004399	0.000143525	PAX8	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
