hg19_v2_chr1_-_149785236_149785236	2.47081	NKX3-1	ENST00000331491.1|HIST2H3D|ENSG00000183598.3|histone cluster 2, H3d
hg19_v2_chr11_-_9482010_9482185	0.970921	NKX3-1	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr16_+_3068393_3068446	0.862182	NKX3-1	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr5_+_176873446_176873516	0.713599	NKX3-1	ENST00000507881.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr19_-_45457264_45457264	0.700051	NKX3-1	ENST00000591646.1|CTB-129P6.11|ENSG00000267114.1|Uncharacterized protein
hg19_v2_chr6_-_154751629_154751694	0.491279	NKX3-1	ENST00000424998.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr19_+_50433476_50433510	0.490355	NKX3-1	ENST00000596658.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr11_-_64684672_64684722	0.475679	NKX3-1	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr11_-_62323702_62323738	0.439593	NKX3-1	ENST00000530285.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr16_+_1832902_1833008	0.429084	NKX3-1	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr11_+_114168085_114168222	0.372117	NKX3-1	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr6_-_26216872_26216895	0.360118	NKX3-1	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chr11_+_65266507_65266522	0.35672	NKX3-1	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr12_+_110011571_110011644	0.355188	NKX3-1	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr16_-_31076332_31076409	0.320383	NKX3-1	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr21_-_46964306_46964332	0.319728	NKX3-1	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr17_+_42422629_42422636	0.31588	NKX3-1	ENST00000589536.1|GRN|ENSG00000030582.12|granulin 	ENST00000587109.1|GRN|ENSG00000030582.12|granulin 	ENST00000587518.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr16_-_31076273_31076290	0.303371	NKX3-1	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr6_+_26020672_26020718	0.302532	NKX3-1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr19_+_56111680_56111735	0.291634	NKX3-1	ENST00000301073.3|ZNF524|ENSG00000171443.6|zinc finger protein 524
hg19_v2_chr19_-_55791431_55791508	0.291032	NKX3-1	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr10_-_103347883_103348027	0.287333	NKX3-1	ENST00000339310.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370158.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000299206.4|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000456836.2|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000413344.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000429502.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000430045.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370172.1|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000436284.2|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda 	ENST00000370162.3|POLL|ENSG00000166169.12|polymerase (DNA directed), lambda
hg19_v2_chr12_+_70219052_70219096	0.282383	NKX3-1	ENST00000552032.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like 	ENST00000547771.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like
hg19_v2_chr15_-_93353028_93353119	0.278552	NKX3-1	ENST00000557398.2|FAM174B|ENSG00000185442.8|family with sequence similarity 174, member B
hg19_v2_chr17_+_67498396_67498409	0.277563	NKX3-1	ENST00000588110.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr15_-_74726283_74726306	0.273474	NKX3-1	ENST00000543145.2|SEMA7A|ENSG00000138623.5|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v2_chrX_+_153237740_153237778	0.272883	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr1_-_156399184_156399225	0.269221	NKX3-1	ENST00000368243.1|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000357975.4|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000310027.5|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61 	ENST00000400991.2|C1orf61|ENSG00000125462.12|chromosome 1 open reading frame 61
hg19_v2_chr11_+_67798090_67798101	0.268378	NKX3-1	ENST00000313468.5|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr19_+_17830051_17830317	0.267733	NKX3-1	ENST00000594625.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000324096.4|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000600186.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000597735.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S
hg19_v2_chr14_-_65409502_65409531	0.260444	NKX3-1	ENST00000389614.5|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr20_-_2821271_2821343	0.260184	NKX3-1	ENST00000448755.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000360652.2|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr16_+_28985542_28985642	0.25957	NKX3-1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr17_+_42422662_42422678	0.25835	NKX3-1	ENST00000593167.1|GRN|ENSG00000030582.12|granulin 	ENST00000585512.1|GRN|ENSG00000030582.12|granulin 	ENST00000591740.1|GRN|ENSG00000030582.12|granulin 	ENST00000592783.1|GRN|ENSG00000030582.12|granulin 	ENST00000587387.1|GRN|ENSG00000030582.12|granulin 	ENST00000588237.1|GRN|ENSG00000030582.12|granulin 	ENST00000589265.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr19_-_55791540_55791549	0.253528	NKX3-1	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr3_-_49726104_49726106	0.250671	NKX3-1	ENST00000383728.3|MST1|ENSG00000173531.11|macrophage stimulating 1 (hepatocyte growth factor-like) 	ENST00000545762.1|MST1|ENSG00000173531.11|macrophage stimulating 1 (hepatocyte growth factor-like)
hg19_v2_chr16_+_32264040_32264040	0.247338	NKX3-1	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr7_+_141463897_141463897	0.245685	NKX3-1	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr1_+_218683438_218683438	0.243076	NKX3-1	ENST00000443836.1|C1orf143|ENSG00000228208.2|chromosome 1 open reading frame 143
hg19_v2_chr11_+_67798114_67798227	0.236662	NKX3-1	ENST00000453471.2|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000528492.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000526339.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000525419.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr4_-_90756769_90756846	0.236469	NKX3-1	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr16_+_73420942_73420962	0.23603	NKX3-1	ENST00000554640.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000562661.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000561875.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1
hg19_v2_chr5_+_150404904_150404928	0.23505	NKX3-1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr4_-_1685718_1686029	0.232879	NKX3-1	ENST00000472884.2|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000489363.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000308132.6|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000463238.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr14_+_97925151_97925207	0.232038	NKX3-1	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr8_+_27169138_27169161	0.230124	NKX3-1	ENST00000522338.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr19_-_56110859_56110996	0.229884	NKX3-1	ENST00000221665.3|FIZ1|ENSG00000179943.6|FLT3-interacting zinc finger 1 	ENST00000592585.1|FIZ1|ENSG00000179943.6|FLT3-interacting zinc finger 1
hg19_v2_chr15_-_31521567_31521649	0.225825	NKX3-1	ENST00000560812.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2	ENST00000559853.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2	ENST00000558109.1|RP11-16E12.2|ENSG00000259772.2|RP11-16E12.2
hg19_v2_chr11_-_118901559_118901621	0.221694	NKX3-1	ENST00000330775.7|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000545985.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000357590.5|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000538950.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v2_chr17_-_39661849_39661871	0.219966	NKX3-1	ENST00000246635.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000336861.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587544.1|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587435.1|KRT13|ENSG00000171401.10|keratin 13
hg19_v2_chr20_-_2821756_2821836	0.21659	NKX3-1	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr16_-_3074231_3074313	0.214566	NKX3-1	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr3_-_10334617_10334637	0.214384	NKX3-1	ENST00000429122.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000425479.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000335542.8|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr16_-_69373396_69373570	0.211513	NKX3-1	ENST00000562595.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000562081.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000306875.4|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8
hg19_v2_chr10_+_46994087_46994087	0.211144	NKX3-1	ENST00000374317.1|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr11_+_64073022_64073056	0.209886	NKX3-1	ENST00000406310.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000000442.6|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000539594.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha
hg19_v2_chr9_+_134065506_134065509	0.209195	NKX3-1	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr6_-_26124138_26124168	0.208425	NKX3-1	ENST00000314332.5|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc 	ENST00000396984.1|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc
hg19_v2_chr19_-_2944907_2944981	0.20841	NKX3-1	ENST00000314531.4|ZNF77|ENSG00000175691.8|zinc finger protein 77
hg19_v2_chr19_-_1592652_1592762	0.208018	NKX3-1	ENST00000156825.1|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3 	ENST00000434436.3|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3
hg19_v2_chr3_+_98482175_98482197	0.205035	NKX3-1	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr3_-_48632593_48632770	0.203716	NKX3-1	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr11_+_94277017_94277097	0.199745	NKX3-1	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr10_+_18629628_18629672	0.193654	NKX3-1	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr17_-_7307358_7307456	0.191063	NKX3-1	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr2_+_173686303_173686325	0.189017	NKX3-1	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr11_+_67798363_67798433	0.188789	NKX3-1	ENST00000525628.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chrX_-_153236819_153236978	0.185867	NKX3-1	ENST00000354233.3|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr5_-_43412418_43412499	0.185748	NKX3-1	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr16_+_83986827_83986852	0.184372	NKX3-1	ENST00000393306.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1 	ENST00000565123.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1
hg19_v2_chr2_-_27545921_27545981	0.183949	NKX3-1	ENST00000402310.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405983.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000403262.2|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000428910.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000402722.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000399052.4|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000380044.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405076.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein
hg19_v2_chr19_+_52704346_52704452	0.183871	NKX3-1	ENST00000462990.1|PPP2R1A|ENSG00000105568.13|protein phosphatase 2, regulatory subunit A, alpha
hg19_v2_chr14_-_54420133_54420173	0.183167	NKX3-1	ENST00000559501.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000558984.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr5_-_1799965_1800009	0.180963	NKX3-1	ENST00000508987.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr14_-_74551172_74551196	0.180705	NKX3-1	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr19_-_42894420_42894451	0.179864	NKX3-1	ENST00000597255.1|CNFN|ENSG00000105427.5|cornifelin 	ENST00000222032.5|CNFN|ENSG00000105427.5|cornifelin
hg19_v2_chr3_-_178976996_178976996	0.178295	NKX3-1	ENST00000485523.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr19_+_10362882_10362952	0.175477	NKX3-1	ENST00000393733.2|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000588502.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4
hg19_v2_chr17_+_42422637_42422655	0.174347	NKX3-1	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr4_-_105416039_105416065	0.173404	NKX3-1	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr6_-_83775489_83775566	0.173178	NKX3-1	ENST00000369747.3|UBE3D|ENSG00000118420.12|ubiquitin protein ligase E3D
hg19_v2_chr17_+_67498295_67498333	0.1729	NKX3-1	ENST00000589295.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr10_+_135204338_135204338	0.171399	NKX3-1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr3_+_113251143_113251263	0.170606	NKX3-1	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr19_+_16308711_16308786	0.167216	NKX3-1	ENST00000429941.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000444449.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000589822.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr17_+_7358889_7358913	0.167166	NKX3-1	ENST00000575379.1|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle)
hg19_v2_chr11_+_65337901_65338153	0.161945	NKX3-1	ENST00000309328.3|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000531405.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000527920.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526877.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000533115.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526433.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1
hg19_v2_chr11_-_117688216_117688240	0.160658	NKX3-1	ENST00000525836.1|DSCAML1|ENSG00000177103.9|Down syndrome cell adhesion molecule like 1
hg19_v2_chr11_+_64685026_64685071	0.159541	NKX3-1	ENST00000526559.1|PPP2R5B|ENSG00000068971.9|protein phosphatase 2, regulatory subunit B', beta
hg19_v2_chr10_-_28571015_28571067	0.159289	NKX3-1	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr12_-_57039739_57039798	0.157263	NKX3-1	ENST00000552959.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000551020.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000553007.2|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552919.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552104.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000262030.3|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr4_+_159131596_159131623	0.154959	NKX3-1	ENST00000512481.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr14_-_68066975_68067027	0.151572	NKX3-1	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr22_+_44427230_44427253	0.151206	NKX3-1	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr2_+_238877424_238877439	0.15118	NKX3-1	ENST00000434655.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr9_+_134065519_134065535	0.151139	NKX3-1	ENST00000531600.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr1_+_151372010_151372055	0.151072	NKX3-1	ENST00000290541.6|PSMB4|ENSG00000159377.6|proteasome (prosome, macropain) subunit, beta type, 4
hg19_v2_chr6_+_43603552_43603563	0.147044	NKX3-1	ENST00000372171.4|MAD2L1BP|ENSG00000124688.9|MAD2L1 binding protein
hg19_v2_chr5_-_176889381_176889432	0.145089	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr7_+_142374104_142374104	0.143022	NKX3-1	ENST00000604952.1|MTRNR2L6|ENSG00000270672.1|MT-RNR2-like 6
hg19_v2_chr17_-_7145475_7145774	0.141586	NKX3-1	ENST00000571129.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000571253.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000573928.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein
hg19_v2_chr12_-_118628315_118628348	0.139802	NKX3-1	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr11_-_104480019_104480058	0.139179	NKX3-1	ENST00000536529.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000545630.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000538641.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1
hg19_v2_chr5_+_112312416_112312440	0.138421	NKX3-1	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr14_-_65409438_65409479	0.138411	NKX3-1	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr6_+_37321823_37321867	0.137514	NKX3-1	ENST00000487950.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase 	ENST00000469731.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase
hg19_v2_chr16_+_56969284_56969314	0.136963	NKX3-1	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr3_-_15106747_15106842	0.135658	NKX3-1	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chrX_-_153237258_153237295	0.135241	NKX3-1	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr6_-_31648150_31648154	0.134723	NKX3-1	ENST00000375858.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000383237.4|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chr1_+_27114589_27114712	0.134446	NKX3-1	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr1_+_186798073_186798147	0.133708	NKX3-1	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr3_+_52489503_52489540	0.132462	NKX3-1	ENST00000345716.4|NISCH|ENSG00000010322.11|nischarin
hg19_v2_chr17_-_39661947_39661969	0.1312	NKX3-1	ENST00000590425.1|KRT13|ENSG00000171401.10|keratin 13
hg19_v2_chr8_+_30300119_30300137	0.128747	NKX3-1	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr10_-_61900762_61900779	0.128396	NKX3-1	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr19_-_15544099_15544156	0.126875	NKX3-1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr1_-_173793458_173793479	0.126613	NKX3-1	ENST00000356198.2|CENPL|ENSG00000120334.11|centromere protein L
hg19_v2_chr1_-_110155671_110155685	0.126115	NKX3-1	ENST00000351050.3|GNAT2|ENSG00000134183.7|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
hg19_v2_chr7_+_16700806_16700897	0.124547	NKX3-1	ENST00000446596.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000438834.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr7_-_7680601_7680632	0.124514	NKX3-1	ENST00000396682.2|RPA3|ENSG00000106399.7|replication protein A3, 14kDa
hg19_v2_chr3_+_39509070_39509101	0.124484	NKX3-1	ENST00000354668.4|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000428261.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000420739.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000415443.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000447324.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000383754.3|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr19_+_13080296_13080395	0.124164	NKX3-1	ENST00000317060.2|DAND5|ENSG00000179284.4|DAN domain family member 5, BMP antagonist
hg19_v2_chr19_+_17186577_17186637	0.123367	NKX3-1	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr6_-_116833500_116833511	0.122521	NKX3-1	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr1_-_153931052_153931124	0.121021	NKX3-1	ENST00000368630.3|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2 	ENST00000368633.1|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2
hg19_v2_chr3_+_39509163_39509180	0.118797	NKX3-1	ENST00000436143.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000441980.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000311042.6|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr14_+_95078714_95078739	0.116646	NKX3-1	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr19_-_44174330_44174502	0.116097	NKX3-1	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr1_+_161475208_161475226	0.110985	NKX3-1	ENST00000367972.4|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32) 	ENST00000271450.6|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32)
hg19_v2_chr13_+_24144509_24144589	0.109996	NKX3-1	ENST00000248484.4|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr7_-_77325545_77325591	0.109621	NKX3-1	ENST00000447009.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000416650.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000440088.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000430801.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000398043.2|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1
hg19_v2_chr6_+_108616054_108616100	0.108847	NKX3-1	ENST00000368977.4|LACE1|ENSG00000135537.12|lactation elevated 1
hg19_v2_chr8_+_128426535_128426535	0.107976	NKX3-1	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr6_-_144385698_144385742	0.107808	NKX3-1	ENST00000444202.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000437412.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr19_+_17970677_17970686	0.106695	NKX3-1	ENST00000222247.5|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr10_-_120938303_120938345	0.103296	NKX3-1	ENST00000356951.3|PRDX3|ENSG00000165672.5|peroxiredoxin 3 	ENST00000298510.2|PRDX3|ENSG00000165672.5|peroxiredoxin 3
hg19_v2_chr12_-_125398602_125398625	0.10261	NKX3-1	ENST00000541272.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000535131.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr12_-_49333446_49333446	0.102589	NKX3-1	ENST00000537495.1|AC073610.5|ENSG00000255863.1|Uncharacterized protein
hg19_v2_chr12_-_53298841_53298867	0.100345	NKX3-1	ENST00000293308.6|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr19_+_17970693_17970741	0.100078	NKX3-1	ENST00000600147.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a 	ENST00000599898.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr17_-_76870222_76870242	0.0928947	NKX3-1	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr19_-_11266471_11266484	0.0928943	NKX3-1	ENST00000592540.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component
hg19_v2_chr9_+_116263639_116263707	0.0927886	NKX3-1	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr19_-_55791563_55791749	0.0902678	NKX3-1	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr20_-_36661826_36661870	0.090202	NKX3-1	ENST00000373448.2|TTI1|ENSG00000101407.8|TELO2 interacting protein 1 	ENST00000373447.3|TTI1|ENSG00000101407.8|TELO2 interacting protein 1
hg19_v2_chr16_+_89628778_89628803	0.0901588	NKX3-1	ENST00000472354.1|RPL13|ENSG00000167526.9|ribosomal protein L13
hg19_v2_chr22_+_18632666_18632764	0.0843243	NKX3-1	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr11_+_101983176_101983245	0.083125	NKX3-1	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr6_-_144416737_144416766	0.0823675	NKX3-1	ENST00000367569.2|SF3B5|ENSG00000169976.5|splicing factor 3b, subunit 5, 10kDa
hg19_v2_chr18_+_61445007_61445021	0.0822389	NKX3-1	ENST00000447428.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7 	ENST00000546027.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr20_-_45318051_45318118	0.082073	NKX3-1	ENST00000372102.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr11_+_57435441_57435628	0.0820473	NKX3-1	ENST00000528177.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr3_-_39196049_39196062	0.0820233	NKX3-1	ENST00000514182.1|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr17_+_41150479_41150500	0.0816026	NKX3-1	ENST00000589913.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chrY_+_15418467_15418467	0.0802309	NKX3-1	ENST00000595988.1|AC010877.1|ENSG00000269291.1|Uncharacterized protein
hg19_v2_chr5_+_125758813_125758845	0.0801024	NKX3-1	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr20_-_50722183_50722217	0.0798659	NKX3-1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr19_+_16308659_16308670	0.0798489	NKX3-1	ENST00000590263.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000590756.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000541844.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr2_-_36779411_36779411	0.0798385	NKX3-1	ENST00000406220.1|AC007401.2|ENSG00000217075.1|Uncharacterized protein
hg19_v2_chr7_-_112430647_112430776	0.0786579	NKX3-1	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr14_-_47812321_47812438	0.0784021	NKX3-1	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr1_-_39339777_39339777	0.076844	NKX3-1	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr7_-_6066183_6066222	0.0759791	NKX3-1	ENST00000422786.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chrX_-_107681633_107681692	0.0757881	NKX3-1	ENST00000394872.2|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6 	ENST00000334504.7|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr4_-_90757364_90757396	0.0756558	NKX3-1	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr5_+_125758865_125758876	0.0728774	NKX3-1	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr6_-_33285505_33285529	0.0714478	NKX3-1	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr12_+_96883347_96883400	0.0711507	NKX3-1	ENST00000524981.4|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55 	ENST00000298953.3|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55
hg19_v2_chr19_-_44174305_44174329	0.0700927	NKX3-1	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr19_-_5719860_5719905	0.0697583	NKX3-1	ENST00000590729.1|LONP1|ENSG00000196365.7|lon peptidase 1, mitochondrial
hg19_v2_chr12_+_6602517_6602559	0.0696704	NKX3-1	ENST00000315579.5|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2 	ENST00000539714.1|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2
hg19_v2_chr17_-_295730_295730	0.069177	NKX3-1	ENST00000329099.4|FAM101B|ENSG00000183688.4|family with sequence similarity 101, member B
hg19_v2_chr5_+_96211643_96211697	0.0668116	NKX3-1	ENST00000437043.3|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2 	ENST00000510373.1|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr14_+_23654525_23654545	0.0659952	NKX3-1	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr19_+_37341260_37341284	0.0658272	NKX3-1	ENST00000589046.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr8_+_77593448_77593471	0.0648108	NKX3-1	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr19_-_14889349_14889381	0.0640596	NKX3-1	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr18_+_61445205_61445227	0.0632646	NKX3-1	ENST00000431370.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr16_-_69760409_69760571	0.0623121	NKX3-1	ENST00000561500.1|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000439109.2|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000564043.1|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000379046.2|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000379047.3|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1
hg19_v2_chr7_-_2883928_2883993	0.0613977	NKX3-1	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr9_+_74729511_74729525	0.0596106	NKX3-1	ENST00000545168.1|GDA|ENSG00000119125.12|guanine deaminase
hg19_v2_chr3_-_156840776_156840823	0.0587327	NKX3-1	ENST00000471357.1|LINC00880|ENSG00000243629.1|long intergenic non-protein coding RNA 880
hg19_v2_chr11_+_86106208_86106229	0.0571893	NKX3-1	ENST00000528728.1|CCDC81|ENSG00000149201.5|coiled-coil domain containing 81
hg19_v2_chr4_+_15376165_15376178	0.054457	NKX3-1	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr1_-_32169920_32169988	0.0542411	NKX3-1	ENST00000373672.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1 	ENST00000373668.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr19_-_42931567_42931581	0.0542086	NKX3-1	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr22_-_50523760_50523787	0.0527421	NKX3-1	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr12_-_22063787_22063912	0.05243	NKX3-1	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr1_+_173793641_173793739	0.0520744	NKX3-1	ENST00000361951.4|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr3_-_18480260_18480269	0.0516806	NKX3-1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chrX_+_9502971_9502984	0.0515271	NKX3-1	ENST00000452824.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr11_-_26588634_26588775	0.0509966	NKX3-1	ENST00000436318.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated 	ENST00000281268.8|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr17_-_76870126_76870201	0.0495321	NKX3-1	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr7_+_100303676_100303719	0.0488356	NKX3-1	ENST00000303151.4|POP7|ENSG00000172336.4|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr6_+_26124373_26124431	0.0467473	NKX3-1	ENST00000377791.2|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac 	ENST00000602637.1|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac
hg19_v2_chr1_+_173793777_173793829	0.046369	NKX3-1	ENST00000239457.5|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr5_-_139937895_139937895	0.0459514	NKX3-1	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr19_+_58144529_58144584	0.0422299	NKX3-1	ENST00000347302.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000254182.7|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000391703.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000541801.1|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000299871.5|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000544273.1|ZNF211|ENSG00000121417.9|zinc finger protein 211
hg19_v2_chr7_+_33168856_33168913	0.0413048	NKX3-1	ENST00000432983.1|BBS9|ENSG00000122507.16|Bardet-Biedl syndrome 9
hg19_v2_chr8_-_27168737_27168836	0.0411746	NKX3-1	ENST00000521253.1|TRIM35|ENSG00000104228.8|tripartite motif containing 35 	ENST00000305364.4|TRIM35|ENSG00000104228.8|tripartite motif containing 35
hg19_v2_chr1_-_208417620_208417680	0.0409322	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr17_+_41150290_41150470	0.0406981	NKX3-1	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr6_-_135271219_135271257	0.0406001	NKX3-1	ENST00000367847.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1 	ENST00000367845.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr6_-_135271260_135271272	0.0403577	NKX3-1	ENST00000265605.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr20_-_56286479_56286541	0.0394464	NKX3-1	ENST00000265626.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr15_-_43877062_43877090	0.0390477	NKX3-1	ENST00000381885.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1 	ENST00000396923.3|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chrX_-_51797351_51797351	0.0378517	NKX3-1	ENST00000375644.3|RP11-114H20.1|ENSG00000182776.4|RP11-114H20.1
hg19_v2_chr20_-_56285595_56285656	0.0370991	NKX3-1	ENST00000395816.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000347215.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr18_-_67623906_67624041	0.0370207	NKX3-1	ENST00000583955.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr8_+_27168988_27169021	0.0368507	NKX3-1	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr5_-_1799932_1799960	0.0352764	NKX3-1	ENST00000382647.7|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36 	ENST00000505059.2|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr15_+_85147127_85147142	0.0345103	NKX3-1	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr8_-_30706608_30706608	0.0316174	NKX3-1	ENST00000256246.2|TEX15|ENSG00000133863.2|testis expressed 15
hg19_v2_chr6_+_26251835_26251879	0.0315506	NKX3-1	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr17_-_76836963_76836987	0.0299421	NKX3-1	ENST00000312010.6|USP36|ENSG00000055483.15|ubiquitin specific peptidase 36
hg19_v2_chr15_-_43876702_43876702	0.0298726	NKX3-1	ENST00000348806.6|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr6_-_127780510_127780539	0.0291627	NKX3-1	ENST00000487331.2|KIAA0408|ENSG00000189367.10|KIAA0408 	ENST00000483725.3|KIAA0408|ENSG00000189367.10|KIAA0408
hg19_v2_chr4_+_108746282_108746364	0.0289567	NKX3-1	ENST00000503862.1|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr4_-_138453606_138453673	0.0277988	NKX3-1	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chrX_-_153637612_153637628	0.0277141	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr1_-_160232291_160232304	0.027518	NKX3-1	ENST00000368074.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000447377.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr15_+_77713222_77713271	0.0273938	NKX3-1	ENST00000558176.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr12_+_111051902_111051975	0.0272712	NKX3-1	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr11_-_64536521_64536543	0.0271593	NKX3-1	ENST00000486867.1|SF1|ENSG00000168066.16|splicing factor 1
hg19_v2_chr2_-_102003987_102004057	0.0270416	NKX3-1	ENST00000324768.5|CREG2|ENSG00000175874.5|cellular repressor of E1A-stimulated genes 2
hg19_v2_chr2_+_201994569_201994589	0.0254686	NKX3-1	ENST00000457277.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr16_+_69373323_69373371	0.0249883	NKX3-1	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr14_-_59951112_59951148	0.0234744	NKX3-1	ENST00000247194.4|L3HYPDH|ENSG00000126790.7|L-3-hydroxyproline dehydratase (trans-)
hg19_v2_chr1_-_32169761_32169776	0.0224957	NKX3-1	ENST00000271069.6|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr18_-_67629015_67629039	0.0223053	NKX3-1	ENST00000579496.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr15_-_58571445_58571478	0.0217354	NKX3-1	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr20_+_2821366_2821410	0.0211735	NKX3-1	ENST00000453689.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000417508.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr20_-_271304_271422	0.0207036	NKX3-1	ENST00000400269.3|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96 	ENST00000360321.2|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr1_-_108231101_108231133	0.0202028	NKX3-1	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr7_-_5998714_5998714	0.019752	NKX3-1	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr5_+_140723601_140723601	0.0197074	NKX3-1	ENST00000253812.6|PCDHGA3|ENSG00000254245.1|protocadherin gamma subfamily A, 3
hg19_v2_chr17_+_68100989_68101026	0.018591	NKX3-1	ENST00000585558.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392670.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_-_48732926_48733015	0.0171805	NKX3-1	ENST00000453202.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chr3_+_100354442_100354464	0.0171312	NKX3-1	ENST00000475887.1|GPR128|ENSG00000144820.3|G protein-coupled receptor 128
hg19_v2_chr5_-_138211051_138211072	0.0160455	NKX3-1	ENST00000518785.1|LRRTM2|ENSG00000146006.7|leucine rich repeat transmembrane neuronal 2
hg19_v2_chr16_+_33204156_33204156	0.0152556	NKX3-1	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr22_-_50523807_50523826	0.0147382	NKX3-1	ENST00000442311.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1 	ENST00000538737.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr2_+_64069459_64069579	0.0142003	NKX3-1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr10_-_99030395_99030434	0.0134844	NKX3-1	ENST00000355366.5|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000371027.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr21_+_35736302_35736323	0.0133932	NKX3-1	ENST00000290310.3|KCNE2|ENSG00000159197.3|potassium voltage-gated channel, Isk-related family, member 2
hg19_v2_chr5_-_1799864_1799930	0.0132714	NKX3-1	ENST00000510999.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr13_+_50570019_50570028	0.0123286	NKX3-1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr10_-_91403625_91403649	0.011578	NKX3-1	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr12_-_54978086_54978100	0.0115616	NKX3-1	ENST00000553113.1|PPP1R1A|ENSG00000135447.12|protein phosphatase 1, regulatory (inhibitor) subunit 1A
hg19_v2_chr1_-_6445809_6445885	0.0097131	NKX3-1	ENST00000377855.2|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr6_+_52930237_52930257	0.00934167	NKX3-1	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr17_-_29641084_29641103	0.00898196	NKX3-1	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr17_-_34257731_34257766	0.00883631	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr12_+_113229337_113229348	0.00828592	NKX3-1	ENST00000552667.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr10_+_114133773_114133784	0.00748384	NKX3-1	ENST00000354655.4|ACSL5|ENSG00000197142.6|acyl-CoA synthetase long-chain family member 5
hg19_v2_chr1_-_120190396_120190396	0.00741259	NKX3-1	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr20_-_34330129_34330234	0.00703591	NKX3-1	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr14_-_102829051_102829237	0.00615421	NKX3-1	ENST00000536961.2|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein 	ENST00000541568.2|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein 	ENST00000216756.6|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein
hg19_v2_chr9_+_132565454_132565547	0.00572623	NKX3-1	ENST00000427860.1|TOR1B|ENSG00000136816.11|torsin family 1, member B (torsin B)
hg19_v2_chr1_-_216596738_216596796	0.00515696	NKX3-1	ENST00000307340.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366943.2|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366942.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild)
hg19_v2_chr17_+_80674559_80674663	0.00392517	NKX3-1	ENST00000269373.6|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000535965.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000577128.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000573158.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein
hg19_v2_chr5_+_138210919_138211157	0.003601	NKX3-1	ENST00000522013.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520260.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523298.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520865.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519634.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517533.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523685.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519768.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517656.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521683.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521640.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519116.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr15_+_31196080_31196136	0.00273086	NKX3-1	ENST00000561607.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1 	ENST00000565466.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1
hg19_v2_chr11_-_71791726_71791756	0.00228752	NKX3-1	ENST00000393695.3|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chrX_+_71353499_71353499	0.00209532	NKX3-1	ENST00000373677.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr18_-_3845321_3845371	0.00162775	NKX3-1	ENST00000539435.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400147.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr1_-_173793246_173793312	0.00143658	NKX3-1	ENST00000345664.6|CENPL|ENSG00000120334.11|centromere protein L 	ENST00000367710.3|CENPL|ENSG00000120334.11|centromere protein L
hg19_v2_chr20_+_2821340_2821365	0.00119848	NKX3-1	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr14_-_39417410_39417466	0.000869357	NKX3-1	ENST00000557019.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000556116.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000554732.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr7_+_107301065_107301080	0.000414043	NKX3-1	ENST00000265715.3|SLC26A4|ENSG00000091137.7|solute carrier family 26 (anion exchanger), member 4
hg19_v2_chr19_+_58144589_58144603	0.000340257	NKX3-1	ENST00000240731.4|ZNF211|ENSG00000121417.9|zinc finger protein 211
