hg19_v2_chr6_-_26027480_26027522	0.980424	NKX2-3	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr6_+_42123141_42123279	0.696571	NKX2-3	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr11_+_65266507_65266522	0.617425	NKX2-3	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr17_-_15469590_15469590	0.57893	NKX2-3	ENST00000312127.2|CDRT1|ENSG00000181464.2|CMT duplicated region transcript 1; Uncharacterized protein
hg19_v2_chr4_-_111536534_111536614	0.576448	NKX2-3	ENST00000503456.1|RP11-380D23.2|ENSG00000250103.1|RP11-380D23.2	ENST00000513690.1|RP11-380D23.2|ENSG00000250103.1|RP11-380D23.2
hg19_v2_chr4_-_90758227_90758379	0.549669	NKX2-3	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chrX_+_109602039_109602054	0.541676	NKX2-3	ENST00000520821.1|RGAG1|ENSG00000243978.4|retrotransposon gag domain containing 1
hg19_v2_chr19_-_44174330_44174502	0.492923	NKX2-3	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr6_-_26216872_26216895	0.458133	NKX2-3	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chr3_-_167191814_167191842	0.454095	NKX2-3	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr1_-_182573514_182573543	0.405437	NKX2-3	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr19_+_45409011_45409069	0.390066	NKX2-3	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr19_+_13051206_13051244	0.385619	NKX2-3	ENST00000586760.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr15_-_36544450_36544459	0.383194	NKX2-3	ENST00000561394.1|RP11-184D12.1|ENSG00000259639.1|RP11-184D12.1
hg19_v2_chr20_-_1317555_1317555	0.379112	NKX2-3	ENST00000537552.1|AL136531.1|ENSG00000203630.3|HCG2043693; Uncharacterized protein
hg19_v2_chr12_-_102591604_102591623	0.374597	NKX2-3	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr10_+_35464513_35464631	0.370052	NKX2-3	ENST00000494479.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463314.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000342105.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000495301.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463960.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr3_+_98482175_98482197	0.35654	NKX2-3	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr16_+_32264040_32264040	0.355967	NKX2-3	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr14_+_45366518_45366552	0.355128	NKX2-3	ENST00000557112.1|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr10_+_129785574_129785608	0.344404	NKX2-3	ENST00000430713.2|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E 	ENST00000471218.1|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr16_+_56969284_56969314	0.333842	NKX2-3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr13_+_23993097_23993110	0.294183	NKX2-3	ENST00000443092.1|SACS-AS1|ENSG00000229558.1|SACS antisense RNA 1
hg19_v2_chr5_+_140213815_140213969	0.292053	NKX2-3	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr3_+_145782358_145782358	0.280504	NKX2-3	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
hg19_v2_chr17_-_80797886_80797906	0.276458	NKX2-3	ENST00000572562.1|ZNF750|ENSG00000141579.6|zinc finger protein 750
hg19_v2_chr10_-_36813162_36813162	0.27566	NKX2-3	ENST00000440465.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr7_+_141463897_141463897	0.27237	NKX2-3	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr19_-_38743878_38743928	0.271591	NKX2-3	ENST00000587515.1|PPP1R14A|ENSG00000167641.6|protein phosphatase 1, regulatory (inhibitor) subunit 14A
hg19_v2_chr5_-_159846066_159846095	0.271133	NKX2-3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr4_+_76439649_76439662	0.27107	NKX2-3	ENST00000507557.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr2_-_37501692_37501747	0.263172	NKX2-3	ENST00000443977.1|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr16_+_8736232_8736325	0.260922	NKX2-3	ENST00000562973.1|METTL22|ENSG00000067365.10|methyltransferase like 22
hg19_v2_chr2_+_232135245_232135393	0.25497	NKX2-3	ENST00000446447.1|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr12_-_123201337_123201439	0.242088	NKX2-3	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr7_-_2883650_2883775	0.236866	NKX2-3	ENST00000544127.1|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr5_+_150404904_150404928	0.232571	NKX2-3	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr16_+_31225337_31225344	0.230616	NKX2-3	ENST00000322122.3|TRIM72|ENSG00000177238.9|tripartite motif containing 72
hg19_v2_chr12_-_104531945_104531996	0.228956	NKX2-3	ENST00000551446.1|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr12_+_93963590_93963628	0.22499	NKX2-3	ENST00000340600.2|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr12_+_111051832_111051873	0.221442	NKX2-3	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr3_+_113775594_113775666	0.219937	NKX2-3	ENST00000479882.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000493014.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr19_-_33182616_33182656	0.218952	NKX2-3	ENST00000592431.1|CTD-2538C1.2|ENSG00000267475.1|CTD-2538C1.2
hg19_v2_chr20_+_60962143_60962172	0.218021	NKX2-3	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chr1_+_225140372_225140418	0.212895	NKX2-3	ENST00000366848.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000439375.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr4_-_84035905_84035955	0.210342	NKX2-3	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr1_+_35220613_35220718	0.208511	NKX2-3	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr12_-_48119301_48119329	0.208066	NKX2-3	ENST00000545824.2|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific 	ENST00000422538.3|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific
hg19_v2_chr1_-_35325400_35325431	0.206775	NKX2-3	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr3_-_171527560_171527714	0.206167	NKX2-3	ENST00000331659.2|PP13439|ENSG00000183657.2|PP13439
hg19_v2_chr12_+_111051902_111051975	0.205104	NKX2-3	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr4_+_80584903_80584915	0.204018	NKX2-3	ENST00000506460.1|RP11-452C8.1|ENSG00000248408.1|RP11-452C8.1
hg19_v2_chr4_-_75695366_75695366	0.202958	NKX2-3	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chr5_-_132200477_132200477	0.198391	NKX2-3	ENST00000296875.2|GDF9|ENSG00000164404.4|growth differentiation factor 9
hg19_v2_chr1_+_43824669_43824684	0.197551	NKX2-3	ENST00000372462.1|CDC20|ENSG00000117399.9|cell division cycle 20
hg19_v2_chr13_-_50018140_50018221	0.197453	NKX2-3	ENST00000410043.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000347776.5|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr4_-_140201333_140201492	0.196276	NKX2-3	ENST00000398955.1|MGARP|ENSG00000137463.4|mitochondria-localized glutamic acid-rich protein
hg19_v2_chr3_-_69062764_69062788	0.194991	NKX2-3	ENST00000295571.5|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr3_+_23851928_23851951	0.194303	NKX2-3	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr6_-_144329531_144329546	0.190727	NKX2-3	ENST00000429150.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392309.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000416623.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392307.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr6_-_32160622_32160719	0.179465	NKX2-3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chr10_+_1120312_1120338	0.178148	NKX2-3	ENST00000436154.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr20_+_57427765_57427783	0.176846	NKX2-3	ENST00000371100.4|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr19_-_46288917_46288971	0.175803	NKX2-3	ENST00000537879.1|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000596586.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein  	ENST00000595946.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein
hg19_v2_chr3_-_49058479_49058491	0.175198	NKX2-3	ENST00000440857.1|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3
hg19_v2_chr12_+_48178706_48178706	0.173709	NKX2-3	ENST00000599515.1|AC004466.1|ENSG00000268069.1|Uncharacterized protein
hg19_v2_chr8_+_1919481_1919563	0.173233	NKX2-3	ENST00000518539.2|KBTBD11-OT1|ENSG00000253696.2|KBTBD11 overlapping transcript 1 (non-protein coding)
hg19_v2_chr11_+_35211429_35211460	0.169527	NKX2-3	ENST00000525688.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000278385.6|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000533222.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr8_-_101719159_101719226	0.169178	NKX2-3	ENST00000520868.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522658.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr19_-_39924349_39924401	0.168901	NKX2-3	ENST00000602153.1|RPS16|ENSG00000105193.4|ribosomal protein S16
hg19_v2_chr7_-_80548667_80548688	0.167594	NKX2-3	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr1_+_155278625_155278745	0.167143	NKX2-3	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr3_-_180397256_180397301	0.166935	NKX2-3	ENST00000442201.2|CCDC39|ENSG00000145075.7|coiled-coil domain containing 39
hg19_v2_chr12_+_123464607_123464873	0.163945	NKX2-3	ENST00000543566.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000315580.5|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000542099.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000392435.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000413381.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000426960.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000453766.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr2_+_71357744_71357791	0.162786	NKX2-3	ENST00000498451.2|MPHOSPH10|ENSG00000124383.4|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
hg19_v2_chr1_+_26147319_26147338	0.162719	NKX2-3	ENST00000374300.3|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like
hg19_v2_chr1_-_232598163_232598163	0.160095	NKX2-3	ENST00000308942.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr19_+_36142147_36142211	0.159877	NKX2-3	ENST00000590618.1|COX6B1|ENSG00000126267.4|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v2_chr19_+_33865218_33865254	0.159777	NKX2-3	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
hg19_v2_chr3_+_23847432_23847512	0.15828	NKX2-3	ENST00000346855.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr20_+_57464200_57464215	0.157735	NKX2-3	ENST00000604005.1|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr9_+_131447342_131447362	0.156673	NKX2-3	ENST00000409104.3|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr8_+_91952750_91952810	0.156631	NKX2-3	ENST00000521366.1|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr2_-_201753980_201754026	0.156301	NKX2-3	ENST00000443398.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000286175.8|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000409449.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr2_-_31440377_31440411	0.151968	NKX2-3	ENST00000444918.2|CAPN14|ENSG00000214711.5|calpain 14 	ENST00000403897.3|CAPN14|ENSG00000214711.5|calpain 14
hg19_v2_chr18_-_74839891_74839921	0.151757	NKX2-3	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr4_+_76439665_76439730	0.149406	NKX2-3	ENST00000508105.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000311638.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000380837.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507556.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000504190.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507885.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000502620.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000514480.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr11_+_118889142_118889232	0.146324	NKX2-3	ENST00000533632.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr11_+_118889456_118889507	0.144879	NKX2-3	ENST00000528230.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000525303.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000434101.2|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000359005.4|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000533058.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr17_+_53345080_53345177	0.143659	NKX2-3	ENST00000572002.1|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr1_+_156561533_156561613	0.142336	NKX2-3	ENST00000368234.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein 	ENST00000368235.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein 	ENST00000368233.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein
hg19_v2_chr12_-_125398654_125398687	0.139278	NKX2-3	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr1_+_155278539_155278559	0.136849	NKX2-3	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr16_+_69458537_69458686	0.136398	NKX2-3	ENST00000515314.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000561792.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000568237.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v2_chr16_+_2255841_2255891	0.136384	NKX2-3	ENST00000301725.7|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr4_-_84035868_84035897	0.135105	NKX2-3	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr4_+_81118647_81118666	0.133421	NKX2-3	ENST00000415738.2|PRDM8|ENSG00000152784.11|PR domain containing 8
hg19_v2_chr4_-_39033963_39034047	0.132589	NKX2-3	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr2_+_64068844_64068997	0.127936	NKX2-3	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr18_+_43684310_43684373	0.126515	NKX2-3	ENST00000592471.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1 	ENST00000585518.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr13_-_44735393_44735393	0.125949	NKX2-3	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr20_-_33539655_33539680	0.124713	NKX2-3	ENST00000451957.2|GSS|ENSG00000100983.5|glutathione synthetase
hg19_v2_chr8_+_11961898_11961898	0.124664	NKX2-3	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chr6_-_116833500_116833511	0.123489	NKX2-3	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr5_-_110848189_110848240	0.122324	NKX2-3	ENST00000296632.3|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000512160.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000509887.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr4_+_146403912_146403972	0.119404	NKX2-3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr12_+_71833550_71833588	0.117883	NKX2-3	ENST00000266674.5|LGR5|ENSG00000139292.8|leucine-rich repeat containing G protein-coupled receptor 5
hg19_v2_chr16_+_2255710_2255789	0.116655	NKX2-3	ENST00000397124.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENST00000565250.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr4_+_48343339_48343414	0.115596	NKX2-3	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr9_-_25678856_25678856	0.115465	NKX2-3	ENST00000358022.3|TUSC1|ENSG00000198680.3|tumor suppressor candidate 1
hg19_v2_chr12_+_6309963_6310022	0.114281	NKX2-3	ENST00000382515.2|CD9|ENSG00000010278.7|CD9 molecule
hg19_v2_chr6_-_33239712_33239723	0.11276	NKX2-3	ENST00000436044.2|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae)
hg19_v2_chr1_+_113217043_113217070	0.112468	NKX2-3	ENST00000413052.2|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr14_+_36295638_36295652	0.112381	NKX2-3	ENST00000543183.1|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr10_+_18041218_18041227	0.11207	NKX2-3	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr1_-_155990580_155990750	0.112064	NKX2-3	ENST00000531917.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000480567.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000526212.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000529008.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000496742.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000295702.4|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta)
hg19_v2_chr10_+_116697946_116698013	0.111803	NKX2-3	ENST00000298746.3|TRUB1|ENSG00000165832.4|TruB pseudouridine (psi) synthase family member 1
hg19_v2_chr7_-_105221898_105221948	0.110609	NKX2-3	ENST00000486180.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10 	ENST00000485614.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10 	ENST00000480514.1|EFCAB10|ENSG00000185055.6|EF-hand calcium binding domain 10
hg19_v2_chrX_-_69509738_69509829	0.110576	NKX2-3	ENST00000374454.1|PDZD11|ENSG00000120509.6|PDZ domain containing 11 	ENST00000239666.4|PDZD11|ENSG00000120509.6|PDZ domain containing 11
hg19_v2_chr19_+_39616410_39616474	0.108351	NKX2-3	ENST00000602004.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599470.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000321944.4|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593480.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000358301.3|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593690.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599386.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4
hg19_v2_chr1_-_33116128_33116185	0.10772	NKX2-3	ENST00000436661.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000373501.2|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000341885.5|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000468695.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand
hg19_v2_chr3_+_183967409_183967497	0.107204	NKX2-3	ENST00000324557.4|ECE2|ENSG00000145194.13|endothelin converting enzyme 2 	ENST00000402825.3|ECE2|ENSG00000145194.13|endothelin converting enzyme 2
hg19_v2_chr4_-_104020968_104020997	0.106179	NKX2-3	ENST00000504285.1|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2
hg19_v2_chr19_-_42746714_42746796	0.105814	NKX2-3	ENST00000222330.3|GSK3A|ENSG00000105723.7|glycogen synthase kinase 3 alpha
hg19_v2_chr6_-_137539651_137539703	0.105116	NKX2-3	ENST00000543628.1|IFNGR1|ENSG00000027697.8|interferon gamma receptor 1
hg19_v2_chrX_-_108976410_108976445	0.104988	NKX2-3	ENST00000504980.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr12_+_123465033_123465075	0.104082	NKX2-3	ENST00000454885.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr7_+_56032652_56032669	0.103899	NKX2-3	ENST00000437587.1|GBAS|ENSG00000146729.5|glioblastoma amplified sequence
hg19_v2_chr7_-_2883928_2883993	0.103874	NKX2-3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr8_+_91803695_91803778	0.101828	NKX2-3	ENST00000417640.2|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr4_-_90757364_90757396	0.100687	NKX2-3	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr19_-_12946236_12946262	0.100385	NKX2-3	ENST00000589272.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000393233.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr11_-_10822029_10822128	0.0999233	NKX2-3	ENST00000528839.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr1_+_174669653_174669663	0.0995937	NKX2-3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr4_+_144303093_144303132	0.0993935	NKX2-3	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_+_41157671_41157695	0.0990856	NKX2-3	ENST00000534399.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma 	ENST00000372653.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr11_+_6226782_6226796	0.0990727	NKX2-3	ENST00000316375.2|C11orf42|ENSG00000180878.2|chromosome 11 open reading frame 42
hg19_v2_chr3_-_69062790_69062855	0.0990576	NKX2-3	ENST00000540955.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 	ENST00000456376.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr17_-_76870126_76870201	0.097918	NKX2-3	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr4_-_100212132_100212185	0.0978695	NKX2-3	ENST00000209668.2|ADH1A|ENSG00000187758.3|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v2_chr2_+_202125219_202125230	0.0975014	NKX2-3	ENST00000323492.7|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase
hg19_v2_chr6_+_36562132_36562154	0.097379	NKX2-3	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr6_-_150212029_150212170	0.0972489	NKX2-3	ENST00000529948.1|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000357183.4|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000367363.3|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E
hg19_v2_chr19_+_3178736_3178779	0.097019	NKX2-3	ENST00000246115.3|S1PR4|ENSG00000125910.4|sphingosine-1-phosphate receptor 4
hg19_v2_chr12_-_104532062_104532071	0.0966168	NKX2-3	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr19_-_45579762_45579846	0.0958711	NKX2-3	ENST00000303809.2|ZNF296|ENSG00000170684.4|zinc finger protein 296
hg19_v2_chr17_+_12569472_12569506	0.0953096	NKX2-3	ENST00000343344.4|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr10_+_17794251_17794260	0.0945048	NKX2-3	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr6_-_33239612_33239684	0.094174	NKX2-3	ENST00000482399.1|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae) 	ENST00000445902.2|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae)
hg19_v2_chr1_+_174670143_174670160	0.0938607	NKX2-3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr16_+_23765948_23765976	0.0927102	NKX2-3	ENST00000300113.2|CHP2|ENSG00000166869.2|calcineurin-like EF-hand protein 2
hg19_v2_chr1_+_113217073_113217127	0.0921099	NKX2-3	ENST00000369645.1|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr15_+_69452959_69452987	0.0920518	NKX2-3	ENST00000261858.2|GLCE|ENSG00000138604.5|glucuronic acid epimerase
hg19_v2_chr1_-_26147149_26147288	0.0916193	NKX2-3	ENST00000536896.1|AL020996.1|ENSG00000223474.2|Uncharacterized protein
hg19_v2_chr19_-_49955096_49955158	0.0915071	NKX2-3	ENST00000595550.1|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr1_+_109632425_109632425	0.0912141	NKX2-3	ENST00000338272.8|TMEM167B|ENSG00000215717.5|transmembrane protein 167B
hg19_v2_chr2_+_64069459_64069579	0.0905276	NKX2-3	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr8_+_19674651_19674670	0.0895403	NKX2-3	ENST00000397977.3|INTS10|ENSG00000104613.7|integrator complex subunit 10
hg19_v2_chrX_-_134049262_134049297	0.089455	NKX2-3	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr15_-_101142401_101142445	0.0887732	NKX2-3	ENST00000314742.8|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr3_-_52002403_52002433	0.0877244	NKX2-3	ENST00000490063.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000468324.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000497653.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000484633.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4
hg19_v2_chr22_+_39101728_39101763	0.0871806	NKX2-3	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr16_-_18911366_18911366	0.0868038	NKX2-3	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr16_-_15474904_15474904	0.086392	NKX2-3	ENST00000534094.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr1_-_68962805_68962904	0.085718	NKX2-3	ENST00000370966.5|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr2_-_36825281_36825342	0.0851392	NKX2-3	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr12_-_48119340_48119350	0.0849473	NKX2-3	ENST00000229003.3|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific
hg19_v2_chrX_-_108976449_108976501	0.0838015	NKX2-3	ENST00000469857.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr4_-_90758118_90758150	0.0828633	NKX2-3	ENST00000420646.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr7_+_7196565_7196714	0.0826348	NKX2-3	ENST00000429911.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr6_+_83073334_83073351	0.0822476	NKX2-3	ENST00000369750.3|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr16_-_31076332_31076409	0.0815211	NKX2-3	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr11_+_94277017_94277097	0.080871	NKX2-3	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr18_-_25616519_25616549	0.0799132	NKX2-3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr4_-_52883786_52883786	0.0793344	NKX2-3	ENST00000343457.3|LRRC66|ENSG00000188993.3|leucine rich repeat containing 66
hg19_v2_chr10_+_103348031_103348092	0.0790886	NKX2-3	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr17_-_76870222_76870242	0.0789456	NKX2-3	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr5_+_49961727_49961740	0.0788893	NKX2-3	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr9_+_131644398_131644475	0.0787889	NKX2-3	ENST00000372599.3|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr8_-_99954788_99954802	0.0787537	NKX2-3	ENST00000523601.1|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr2_+_132044330_132044330	0.0783094	NKX2-3	ENST00000416266.1|CYP4F31P|ENSG00000178206.3|cytochrome P450, family 4, subfamily F, polypeptide 31, pseudogene
hg19_v2_chr2_+_234621551_234621638	0.0764613	NKX2-3	ENST00000608381.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000373414.3|UGT1A5|ENSG00000240224.1|UDP glucuronosyltransferase 1 family, polypeptide A5
hg19_v2_chr14_+_100531738_100531766	0.0762608	NKX2-3	ENST00000555706.1|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr14_+_100531615_100531705	0.0756834	NKX2-3	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr22_+_45714301_45714339	0.0752137	NKX2-3	ENST00000427777.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr2_+_64073187_64073217	0.074971	NKX2-3	ENST00000491621.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr14_+_55494323_55494345	0.0739712	NKX2-3	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr6_-_2971494_2971544	0.0736607	NKX2-3	ENST00000380539.1|SERPINB6|ENSG00000124570.13|serpin peptidase inhibitor, clade B (ovalbumin), member 6
hg19_v2_chr10_-_104262460_104262489	0.0734282	NKX2-3	ENST00000446605.2|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000369905.4|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000545684.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr3_-_101039402_101039429	0.0727202	NKX2-3	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr22_+_32439019_32439044	0.07122	NKX2-3	ENST00000266088.4|SLC5A1|ENSG00000100170.5|solute carrier family 5 (sodium/glucose cotransporter), member 1
hg19_v2_chr18_-_64271316_64271334	0.0704341	NKX2-3	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr19_-_49955050_49955095	0.0703631	NKX2-3	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr11_+_7595136_7595171	0.0697246	NKX2-3	ENST00000529575.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr14_+_67831576_67831615	0.069509	NKX2-3	ENST00000555876.1|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr15_+_43477455_43477482	0.06945	NKX2-3	ENST00000300213.4|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr6_+_83072923_83072978	0.0693093	NKX2-3	ENST00000535040.1|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr11_+_12399071_12399185	0.0687044	NKX2-3	ENST00000539723.1|PARVA|ENSG00000197702.7|parvin, alpha 	ENST00000550549.1|PARVA|ENSG00000197702.7|parvin, alpha
hg19_v2_chr1_+_65613340_65613370	0.0685815	NKX2-3	ENST00000546702.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr15_-_101142362_101142395	0.0683259	NKX2-3	ENST00000559577.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000561308.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560133.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560941.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000559736.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560272.1|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr10_+_27793197_27793247	0.0676783	NKX2-3	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chrX_-_134049233_134049258	0.0673217	NKX2-3	ENST00000370779.4|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr12_-_125398850_125399198	0.0666885	NKX2-3	ENST00000535859.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546271.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540700.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546120.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr18_-_53735601_53735649	0.066251	NKX2-3	ENST00000589754.1|CTD-2008L17.2|ENSG00000206129.3|CTD-2008L17.2
hg19_v2_chr17_-_41132410_41132545	0.0661954	NKX2-3	ENST00000409446.3|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like 	ENST00000409399.1|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000421990.2|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000453594.1|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like
hg19_v2_chrX_-_40036520_40036582	0.0659857	NKX2-3	ENST00000406200.2|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378455.4|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000342274.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr5_-_70320941_70320941	0.0656588	NKX2-3	ENST00000523981.1|NAIP|ENSG00000249437.3|NLR family, apoptosis inhibitory protein
hg19_v2_chr2_-_178128528_178128574	0.0649012	NKX2-3	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr4_+_77356248_77356295	0.064257	NKX2-3	ENST00000296043.6|SHROOM3|ENSG00000138771.10|shroom family member 3
hg19_v2_chr7_+_141408153_141408153	0.0637609	NKX2-3	ENST00000397541.2|WEE2|ENSG00000214102.3|WEE1 homolog 2 (S. pombe)
hg19_v2_chr11_-_62342375_62342471	0.0634738	NKX2-3	ENST00000378019.3|EEF1G|ENSG00000254772.5|eukaryotic translation elongation factor 1 gamma
hg19_v2_chr6_-_11382478_11382592	0.0633248	NKX2-3	ENST00000397378.3|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000513989.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000508546.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000504387.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr8_+_117963190_117963224	0.0631147	NKX2-3	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr5_-_58335281_58335339	0.0630334	NKX2-3	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr9_+_75229616_75229616	0.0628106	NKX2-3	ENST00000340019.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr15_+_85147127_85147142	0.0623811	NKX2-3	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr14_+_39703112_39703135	0.0621056	NKX2-3	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr2_+_219110149_219110226	0.0617306	NKX2-3	ENST00000456575.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr5_-_114631958_114631990	0.0605752	NKX2-3	ENST00000395557.4|CCDC112|ENSG00000164221.8|coiled-coil domain containing 112
hg19_v2_chr18_+_22040593_22040616	0.059741	NKX2-3	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr2_+_234590556_234590584	0.0596228	NKX2-3	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr22_+_25202232_25202286	0.0591866	NKX2-3	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr16_-_31076273_31076290	0.058513	NKX2-3	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chrX_+_153029633_153029738	0.057751	NKX2-3	ENST00000538966.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000361971.5|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538776.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538543.1|PLXNB3|ENSG00000198753.7|plexin B3
hg19_v2_chr6_+_32121789_32121872	0.0575146	NKX2-3	ENST00000437001.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000375137.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr2_-_38303218_38303323	0.0574035	NKX2-3	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr19_-_39368887_39368935	0.0569656	NKX2-3	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr1_+_46806837_46806885	0.0567181	NKX2-3	ENST00000537428.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr11_-_65488260_65488418	0.056609	NKX2-3	ENST00000527610.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000528220.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000308418.4|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C
hg19_v2_chr10_-_104262426_104262437	0.0564535	NKX2-3	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr1_-_31538517_31538632	0.0559151	NKX2-3	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr2_+_161993465_161993481	0.0551725	NKX2-3	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr17_-_36760865_36760976	0.0547437	NKX2-3	ENST00000584266.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr1_-_2343951_2344018	0.0539835	NKX2-3	ENST00000288774.3|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000507596.1|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000447513.2|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10
hg19_v2_chr18_+_43684298_43684304	0.0535878	NKX2-3	ENST00000282058.6|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr11_+_10326612_10326635	0.0533681	NKX2-3	ENST00000534464.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000530439.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000524948.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000528655.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000526492.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000525063.1|ADM|ENSG00000148926.5|adrenomedullin
hg19_v2_chr10_+_129785536_129785551	0.0532797	NKX2-3	ENST00000419012.2|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr20_-_33735070_33735175	0.0523969	NKX2-3	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr19_-_14887568_14887660	0.0523519	NKX2-3	ENST00000596991.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000594294.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000594076.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000595839.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392965.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000601345.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr2_+_191045173_191045266	0.0522966	NKX2-3	ENST00000409870.1|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr12_+_49761224_49761259	0.0521744	NKX2-3	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr7_-_38948774_38948829	0.0519379	NKX2-3	ENST00000395969.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000414632.1|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000310301.4|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr3_+_10157276_10157377	0.050235	NKX2-3	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr12_+_10460417_10460485	0.0490646	NKX2-3	ENST00000381908.3|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000336164.4|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000350274.5|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr13_+_50570019_50570028	0.0482489	NKX2-3	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr12_-_110434096_110434139	0.0473438	NKX2-3	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr5_-_115177247_115177279	0.0472293	NKX2-3	ENST00000500945.2|ATG12|ENSG00000145782.8|autophagy related 12
hg19_v2_chr1_-_29508499_29508524	0.0471441	NKX2-3	ENST00000373795.4|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr4_-_100242549_100242564	0.0470372	NKX2-3	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr14_-_30766223_30766249	0.0463779	NKX2-3	ENST00000549360.1|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1	ENST00000508469.2|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1
hg19_v2_chr2_-_188419200_188419224	0.0452892	NKX2-3	ENST00000233156.3|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000426055.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000453013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000417013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v2_chr5_-_96518907_96518997	0.0452682	NKX2-3	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr8_-_102987548_102987571	0.0449377	NKX2-3	ENST00000520690.1|NCALD|ENSG00000104490.13|neurocalcin delta
hg19_v2_chr15_+_43477580_43477656	0.0442794	NKX2-3	ENST00000356633.5|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr15_-_99791413_99791437	0.04411	NKX2-3	ENST00000394129.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558663.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394135.3|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000561365.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560279.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr4_-_109541539_109541585	0.0440752	NKX2-3	ENST00000509984.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000507248.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000506795.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr4_-_120550146_120550201	0.0438913	NKX2-3	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr14_+_102276209_102276242	0.0438833	NKX2-3	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr21_+_17442799_17442853	0.0436988	NKX2-3	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr2_-_54197915_54197977	0.0435865	NKX2-3	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr19_-_3478477_3478500	0.0433564	NKX2-3	ENST00000591708.1|C19orf77|ENSG00000095932.5|chromosome 19 open reading frame 77
hg19_v2_chr12_+_12966250_12966302	0.0427952	NKX2-3	ENST00000352940.4|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000358007.3|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000544400.1|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
hg19_v2_chr11_+_28131821_28131869	0.042696	NKX2-3	ENST00000379199.2|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000303459.6|METTL15|ENSG00000169519.15|methyltransferase like 15
hg19_v2_chr22_+_44427230_44427253	0.042401	NKX2-3	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chrX_+_114795489_114795582	0.042129	NKX2-3	ENST00000355899.3|PLS3|ENSG00000102024.13|plastin 3 	ENST00000537301.1|PLS3|ENSG00000102024.13|plastin 3 	ENST00000289290.3|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr14_-_75643296_75643341	0.04103	NKX2-3	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr22_+_21213771_21213788	0.0407562	NKX2-3	ENST00000439214.1|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr16_+_3184924_3185045	0.0404253	NKX2-3	ENST00000574902.1|ZNF213|ENSG00000085644.9|zinc finger protein 213 	ENST00000396878.3|ZNF213|ENSG00000085644.9|zinc finger protein 213
hg19_v2_chr14_-_21516590_21516692	0.0397537	NKX2-3	ENST00000555026.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr19_+_7445850_7445850	0.0391703	NKX2-3	ENST00000593531.1|CTD-2207O23.3|ENSG00000268861.1|Rho guanine nucleotide exchange factor 18
hg19_v2_chr6_+_33239787_33239859	0.0387469	NKX2-3	ENST00000439602.2|RPS18|ENSG00000231500.2|ribosomal protein S18 	ENST00000474973.1|RPS18|ENSG00000231500.2|ribosomal protein S18
hg19_v2_chr14_-_93214915_93214979	0.0386386	NKX2-3	ENST00000553918.1|LGMN|ENSG00000100600.10|legumain 	ENST00000555699.1|LGMN|ENSG00000100600.10|legumain 	ENST00000553802.1|LGMN|ENSG00000100600.10|legumain 	ENST00000554397.1|LGMN|ENSG00000100600.10|legumain 	ENST00000554919.1|LGMN|ENSG00000100600.10|legumain 	ENST00000554080.1|LGMN|ENSG00000100600.10|legumain 	ENST00000553371.1|LGMN|ENSG00000100600.10|legumain
hg19_v2_chr16_+_14802801_14802801	0.0374905	NKX2-3	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr4_+_95376396_95376421	0.0366651	NKX2-3	ENST00000508216.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000514743.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chr3_-_122712079_122712120	0.0363616	NKX2-3	ENST00000393583.2|SEMA5B|ENSG00000082684.10|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
hg19_v2_chr17_-_39023462_39023477	0.036086	NKX2-3	ENST00000251643.4|KRT12|ENSG00000187242.4|keratin 12
hg19_v2_chr9_+_131644388_131644393	0.0359064	NKX2-3	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr17_+_7591639_7591672	0.0356122	NKX2-3	ENST00000396463.2|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr21_-_46131470_46131495	0.0348713	NKX2-3	ENST00000323084.4|TSPEAR|ENSG00000175894.10|thrombospondin-type laminin G domain and EAR repeats
hg19_v2_chr19_+_53761545_53761545	0.0346681	NKX2-3	ENST00000341702.3|VN1R2|ENSG00000196131.6|vomeronasal 1 receptor 2
hg19_v2_chr8_+_92261516_92261555	0.0346616	NKX2-3	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr3_+_39093481_39093520	0.0341352	NKX2-3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr8_+_75262629_75262694	0.0339795	NKX2-3	ENST00000434412.2|GDAP1|ENSG00000104381.8|ganglioside induced differentiation associated protein 1
hg19_v2_chr14_-_45252031_45252036	0.0329336	NKX2-3	ENST00000556405.1|RP11-398E10.1|ENSG00000258998.1|RP11-398E10.1
hg19_v2_chr10_-_73976884_73976894	0.0317005	NKX2-3	ENST00000317126.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000545550.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr16_-_18468926_18468926	0.0316731	NKX2-3	ENST00000545114.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr19_+_17622415_17622481	0.0316398	NKX2-3	ENST00000252603.2|PGLS|ENSG00000130313.2|6-phosphogluconolactonase 	ENST00000600923.1|PGLS|ENSG00000130313.2|6-phosphogluconolactonase
hg19_v2_chr9_+_116263778_116263793	0.0306345	NKX2-3	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr14_+_89060739_89060745	0.030627	NKX2-3	ENST00000318308.6|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr15_-_78369994_78370069	0.0303834	NKX2-3	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chr19_-_10341948_10341965	0.030368	NKX2-3	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chrX_-_32173579_32173593	0.0303675	NKX2-3	ENST00000359836.1|DMD|ENSG00000198947.10|dystrophin 	ENST00000343523.2|DMD|ENSG00000198947.10|dystrophin 	ENST00000378707.3|DMD|ENSG00000198947.10|dystrophin 	ENST00000541735.1|DMD|ENSG00000198947.10|dystrophin 	ENST00000474231.1|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr17_+_41132564_41132600	0.0302826	NKX2-3	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr3_+_108541545_108541569	0.0296743	NKX2-3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr17_-_8055747_8055758	0.0295055	NKX2-3	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr20_-_31071239_31071307	0.0294011	NKX2-3	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr1_-_19746236_19746261	0.0291418	NKX2-3	ENST00000375144.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr7_-_37393263_37393284	0.0291063	NKX2-3	ENST00000442504.1|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr18_-_43684186_43684199	0.0290496	NKX2-3	ENST00000590406.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000282050.2|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000590324.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr10_-_32345305_32345376	0.0289998	NKX2-3	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr10_-_112678692_112678695	0.0289341	NKX2-3	ENST00000605742.1|BBIP1|ENSG00000214413.3|BBSome interacting protein 1
hg19_v2_chr3_+_183892635_183892737	0.0288091	NKX2-3	ENST00000427072.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000411763.2|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000292807.5|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000448139.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000455925.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit
hg19_v2_chr12_-_122018859_122018941	0.0278452	NKX2-3	ENST00000536437.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000377071.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000538046.2|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr8_-_17555164_17555204	0.027814	NKX2-3	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr1_-_28559502_28559570	0.0273434	NKX2-3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr11_+_17569375_17569375	0.0272128	NKX2-3	ENST00000399397.1|OTOG|ENSG00000188162.6|otogelin
hg19_v2_chr14_-_90798273_90798323	0.027203	NKX2-3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chrX_+_47420516_47420621	0.0270806	NKX2-3	ENST00000377045.4|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000290277.6|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000377039.2|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog
hg19_v2_chr12_-_48398104_48398269	0.0269457	NKX2-3	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr13_+_42712178_42712197	0.0266878	NKX2-3	ENST00000536612.1|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr22_+_45714672_45714710	0.0265542	NKX2-3	ENST00000424557.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr1_+_202317855_202317864	0.0261834	NKX2-3	ENST00000356764.2|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr1_-_175712829_175712906	0.026082	NKX2-3	ENST00000367674.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr17_+_26662730_26662844	0.0258879	NKX2-3	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr13_-_50018241_50018277	0.0250528	NKX2-3	ENST00000409308.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr1_-_197036364_197036401	0.0249542	NKX2-3	ENST00000367412.1|F13B|ENSG00000143278.3|coagulation factor XIII, B polypeptide
hg19_v2_chr11_-_111175739_111175773	0.0248631	NKX2-3	ENST00000532918.1|COLCA1|ENSG00000196167.5|colorectal cancer associated 1
hg19_v2_chr12_-_45315625_45315636	0.0247032	NKX2-3	ENST00000552993.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chrX_-_115085422_115085485	0.0246082	NKX2-3	ENST00000430756.2|RP11-761E20.1|ENSG00000235244.3|RP11-761E20.1
hg19_v2_chr3_+_186560476_186560505	0.0245506	NKX2-3	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr10_-_104913367_104913393	0.0241356	NKX2-3	ENST00000423468.2|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr20_-_23969416_23969416	0.0238894	NKX2-3	ENST00000335694.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1
hg19_v2_chr13_+_50018402_50018469	0.0237356	NKX2-3	ENST00000354234.4|SETDB2|ENSG00000136169.12|SET domain, bifurcated 2
hg19_v2_chr14_+_36295504_36295580	0.0236704	NKX2-3	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr12_-_14849470_14849540	0.0233945	NKX2-3	ENST00000261170.3|GUCY2C|ENSG00000070019.3|guanylate cyclase 2C (heat stable enterotoxin receptor)
hg19_v2_chr3_-_131753830_131753844	0.022962	NKX2-3	ENST00000429747.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chr5_+_112312399_112312414	0.0229523	NKX2-3	ENST00000515408.1|DCP2|ENSG00000172795.11|decapping mRNA 2 	ENST00000513585.1|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr1_+_145883868_145883868	0.0225179	NKX2-3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr7_-_87342564_87342617	0.021893	NKX2-3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr12_-_108714412_108714446	0.0218345	NKX2-3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chr2_-_158184211_158184231	0.0211978	NKX2-3	ENST00000397283.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr22_+_45714361_45714374	0.0209484	NKX2-3	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr22_-_44258280_44258336	0.0208987	NKX2-3	ENST00000540422.1|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr3_+_186560462_186560473	0.0206398	NKX2-3	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr2_-_180129484_180129574	0.020454	NKX2-3	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr3_+_113775576_113775592	0.0203092	NKX2-3	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr4_-_5990166_5990166	0.0202397	NKX2-3	ENST00000324058.5|C4orf50|ENSG00000181215.8|chromosome 4 open reading frame 50
hg19_v2_chr17_+_61905058_61905238	0.0196751	NKX2-3	ENST00000375812.4|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000581882.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr4_-_141677267_141677291	0.0194943	NKX2-3	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr11_+_65627974_65628026	0.0190313	NKX2-3	ENST00000525768.1|MUS81|ENSG00000172732.7|MUS81 structure-specific endonuclease subunit
hg19_v2_chr12_-_122296755_122296770	0.0183744	NKX2-3	ENST00000289004.4|HPD|ENSG00000158104.7|4-hydroxyphenylpyruvate dioxygenase
hg19_v2_chr12_+_41136144_41136158	0.0182242	NKX2-3	ENST00000548005.1|CNTN1|ENSG00000018236.10|contactin 1 	ENST00000552248.1|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr7_-_127255724_127255780	0.017439	NKX2-3	ENST00000463946.1|PAX4|ENSG00000106331.10|paired box 4 	ENST00000341640.2|PAX4|ENSG00000106331.10|paired box 4
hg19_v2_chr14_+_23938891_23938953	0.0173691	NKX2-3	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr1_-_175712665_175712761	0.0172188	NKX2-3	ENST00000263525.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr3_-_150920979_150921009	0.0170266	NKX2-3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr7_-_1609591_1609690	0.0166538	NKX2-3	ENST00000288607.2|PSMG3|ENSG00000157778.4|proteasome (prosome, macropain) assembly chaperone 3 	ENST00000404674.3|PSMG3|ENSG00000157778.4|proteasome (prosome, macropain) assembly chaperone 3
hg19_v2_chr17_+_36283971_36284016	0.0159081	NKX2-3	ENST00000327454.6|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F 	ENST00000378174.5|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F
hg19_v2_chr19_-_19051993_19052073	0.0145959	NKX2-3	ENST00000594794.1|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000355887.6|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000392351.3|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila) 	ENST00000596482.1|HOMER3|ENSG00000051128.14|homer homolog 3 (Drosophila)
hg19_v2_chr1_-_212965104_212965141	0.0144172	NKX2-3	ENST00000422588.2|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366975.6|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366977.3|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366976.1|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component
hg19_v2_chr15_-_56757329_56757342	0.0142325	NKX2-3	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr3_+_182971018_182971059	0.0141792	NKX2-3	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr9_-_95166884_95166908	0.0138987	NKX2-3	ENST00000375561.5|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr6_-_32731299_32731316	0.0137974	NKX2-3	ENST00000435145.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000437316.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr3_+_38179969_38180192	0.0136763	NKX2-3	ENST00000396334.3|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000417037.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000424893.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000495303.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000443433.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000421516.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88
hg19_v2_chr18_-_43684230_43684300	0.0136756	NKX2-3	ENST00000592989.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000589869.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr18_+_32173276_32173349	0.0130576	NKX2-3	ENST00000591816.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588125.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000598334.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588684.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000554864.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399121.5|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000595022.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000269190.7|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399097.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr3_+_108541608_108541624	0.0129527	NKX2-3	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr17_+_26662597_26662628	0.012691	NKX2-3	ENST00000544907.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr1_-_165668100_165668100	0.0122885	NKX2-3	ENST00000354775.4|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr20_+_33104199_33104260	0.0121621	NKX2-3	ENST00000357156.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000417166.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000300469.9|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000374846.3|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1
hg19_v2_chr12_+_42719947_42719983	0.0120633	NKX2-3	ENST00000395580.3|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000337898.6|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000358314.7|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000395568.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000256678.8|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000449194.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000552761.1|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000317560.9|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000432191.2|PPHLN1|ENSG00000134283.13|periphilin 1
hg19_v2_chr7_-_16505440_16505474	0.0111026	NKX2-3	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr12_+_49761273_49761330	0.0109003	NKX2-3	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr5_+_162930114_162930125	0.0106301	NKX2-3	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr10_+_79793518_79793641	0.00994279	NKX2-3	ENST00000440692.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000435275.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000372360.3|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000360830.4|RPS24|ENSG00000138326.14|ribosomal protein S24
hg19_v2_chr1_-_162381907_162381939	0.00948307	NKX2-3	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr15_+_40674920_40674937	0.00931558	NKX2-3	ENST00000416151.2|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein 	ENST00000249776.8|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein
hg19_v2_chr4_+_102734967_102735022	0.00868193	NKX2-3	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr10_+_3146868_3146939	0.00791316	NKX2-3	ENST00000415005.1|PFKP|ENSG00000067057.12|phosphofructokinase, platelet 	ENST00000468050.1|PFKP|ENSG00000067057.12|phosphofructokinase, platelet
hg19_v2_chrX_-_15620192_15620294	0.0078923	NKX2-3	ENST00000427411.1|ACE2|ENSG00000130234.6|angiotensin I converting enzyme 2
hg19_v2_chr3_-_100551141_100551158	0.00739201	NKX2-3	ENST00000478235.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000471901.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr1_+_15943995_15944014	0.00691914	NKX2-3	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr12_-_121790237_121790265	0.00691812	NKX2-3	ENST00000261819.3|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5
hg19_v2_chr12_+_56546363_56546397	0.00678568	NKX2-3	ENST00000551834.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000552568.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr11_+_11863579_11863618	0.00660983	NKX2-3	ENST00000399455.2|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47
hg19_v2_chr4_+_189321881_189321895	0.00630771	NKX2-3	ENST00000512839.1|LINC01060|ENSG00000249378.1|long intergenic non-protein coding RNA 1060 	ENST00000513313.1|LINC01060|ENSG00000249378.1|long intergenic non-protein coding RNA 1060
hg19_v2_chrX_-_118284542_118284542	0.00630403	NKX2-3	ENST00000402510.2|KIAA1210|ENSG00000250423.2|KIAA1210
hg19_v2_chr8_-_101718991_101719023	0.00622011	NKX2-3	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr15_+_33022885_33022907	0.00572018	NKX2-3	ENST00000322805.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr22_-_50523807_50523826	0.00559713	NKX2-3	ENST00000442311.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1 	ENST00000538737.1|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr4_+_128802016_128802095	0.00548781	NKX2-3	ENST00000270861.5|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000515069.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000513090.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000507249.1|PLK4|ENSG00000142731.6|polo-like kinase 4
hg19_v2_chr4_-_85654615_85654615	0.00534357	NKX2-3	ENST00000514711.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr17_-_61905005_61905041	0.00512728	NKX2-3	ENST00000584574.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000585145.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000427159.2|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli)
hg19_v2_chr3_+_186743261_186743277	0.00500892	NKX2-3	ENST00000423451.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 	ENST00000446170.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr10_+_99332529_99332543	0.00453296	NKX2-3	ENST00000455090.1|ANKRD2|ENSG00000165887.7|ankyrin repeat domain 2 (stretch responsive muscle)
hg19_v2_chr12_-_123187890_123187911	0.00406309	NKX2-3	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr9_-_95166841_95166867	0.00405448	NKX2-3	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr18_-_13915530_13915540	0.00398669	NKX2-3	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr7_+_29186174_29186188	0.00390273	NKX2-3	ENST00000439384.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr5_+_138210919_138211157	0.00378648	NKX2-3	ENST00000522013.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520260.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523298.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520865.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519634.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517533.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523685.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519768.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517656.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521683.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521640.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519116.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr1_-_29508321_29508444	0.00366865	NKX2-3	ENST00000546138.1|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr17_-_29641084_29641103	0.0035698	NKX2-3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr8_+_103540983_103541059	0.00312814	NKX2-3	ENST00000523572.1|KB-1980E6.3|ENSG00000253633.1|Uncharacterized protein
hg19_v2_chr12_+_19389814_19389872	0.00240382	NKX2-3	ENST00000536974.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr1_-_35325318_35325397	0.00227864	NKX2-3	ENST00000423898.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12 	ENST00000456842.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr1_-_22109484_22109528	0.00223567	NKX2-3	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr9_+_71819927_71820053	0.00221949	NKX2-3	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr16_+_78133293_78133341	0.00198519	NKX2-3	ENST00000566780.1|WWOX|ENSG00000186153.12|WW domain containing oxidoreductase
hg19_v2_chr10_-_5227096_5227144	0.00197604	NKX2-3	ENST00000488756.1|AKR1CL1|ENSG00000196326.6|aldo-keto reductase family 1, member C-like 1 	ENST00000334314.3|AKR1CL1|ENSG00000196326.6|aldo-keto reductase family 1, member C-like 1
hg19_v2_chr1_-_114696472_114696541	0.00127279	NKX2-3	ENST00000393296.1|SYT6|ENSG00000134207.10|synaptotagmin VI 	ENST00000369547.1|SYT6|ENSG00000134207.10|synaptotagmin VI 	ENST00000610222.1|SYT6|ENSG00000134207.10|synaptotagmin VI
hg19_v2_chr2_-_172291273_172291305	0.00119808	NKX2-3	ENST00000442778.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000453846.1|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr3_-_49757101_49757128	0.000647682	NKX2-3	ENST00000320431.7|AMIGO3|ENSG00000176020.7|adhesion molecule with Ig-like domain 3
hg19_v2_chr4_-_48082192_48082207	4.0925e-05	NKX2-3	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr6_+_32006042_32006084	3.21286e-05	NKX2-3	ENST00000418967.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr3_-_69062742_69062757	1.65323e-05	NKX2-3	ENST00000424374.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
