hg19_v2_chr19_+_50148087_50148275	0.790516	NKX2-1	ENST00000601038.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1 	ENST00000595242.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1
hg19_v2_chr15_+_76030311_76030311	0.646929	NKX2-1	ENST00000543887.1|AC019294.1|ENSG00000256530.1|AC019294.1
hg19_v2_chr1_+_180165672_180165817	0.625134	NKX2-1	ENST00000443059.1|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr11_-_62313090_62313169	0.557582	NKX2-1	ENST00000528508.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000533365.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr16_+_640055_640118	0.533042	NKX2-1	ENST00000568586.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000538492.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000248139.3|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chr16_-_67190152_67190152	0.483337	NKX2-1	ENST00000486556.1|TRADD|ENSG00000102871.11|TNFRSF1A-associated via death domain
hg19_v2_chr17_+_38375528_38375570	0.421821	NKX2-1	ENST00000583268.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr19_-_36231437_36231524	0.419161	NKX2-1	ENST00000591748.1|IGFLR1|ENSG00000126246.5|IGF-like family receptor 1
hg19_v2_chr6_-_27841289_27841318	0.406245	NKX2-1	ENST00000355981.2|HIST1H4L|ENSG00000198558.2|histone cluster 1, H4l
hg19_v2_chr5_-_172662303_172662360	0.395494	NKX2-1	ENST00000517440.1|NKX2-5|ENSG00000183072.9|NK2 homeobox 5 	ENST00000329198.4|NKX2-5|ENSG00000183072.9|NK2 homeobox 5
hg19_v2_chr19_+_36235964_36236015	0.388533	NKX2-1	ENST00000587708.2|PSENEN|ENSG00000205155.3|presenilin enhancer gamma secretase subunit
hg19_v2_chr15_-_43029252_43029333	0.381825	NKX2-1	ENST00000563260.1|CDAN1|ENSG00000140326.8|codanin 1 	ENST00000356231.3|CDAN1|ENSG00000140326.8|codanin 1
hg19_v2_chr8_+_94752349_94752349	0.376783	NKX2-1	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr6_-_42858534_42858595	0.364081	NKX2-1	ENST00000408925.2|C6orf226|ENSG00000221821.2|chromosome 6 open reading frame 226
hg19_v2_chr6_+_100054606_100054606	0.329577	NKX2-1	ENST00000369215.4|PRDM13|ENSG00000112238.11|PR domain containing 13
hg19_v2_chr3_-_49837254_49837283	0.303249	NKX2-1	ENST00000412678.2|CDHR4|ENSG00000187492.4|cadherin-related family member 4 	ENST00000343366.4|CDHR4|ENSG00000187492.4|cadherin-related family member 4 	ENST00000487256.1|CDHR4|ENSG00000187492.4|cadherin-related family member 4
hg19_v2_chr16_+_58533951_58534056	0.299341	NKX2-1	ENST00000566192.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000565088.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000568640.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000563978.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000569923.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000356752.4|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000563799.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000562999.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000570248.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000562731.1|NDRG4|ENSG00000103034.10|NDRG family member 4 	ENST00000568424.1|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr19_-_46234119_46234189	0.295217	NKX2-1	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chr22_-_30968839_30968859	0.292078	NKX2-1	ENST00000445645.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000416358.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000423371.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000411821.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000448604.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chr8_-_144679602_144679617	0.28091	NKX2-1	ENST00000526710.1|EEF1D|ENSG00000104529.13|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
hg19_v2_chr10_-_79397547_79397575	0.280781	NKX2-1	ENST00000481070.1|KCNMA1|ENSG00000156113.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v2_chr10_-_103454876_103455016	0.250909	NKX2-1	ENST00000331272.7|FBXW4|ENSG00000107829.9|F-box and WD repeat domain containing 4
hg19_v2_chr15_+_89182156_89182177	0.250268	NKX2-1	ENST00000379224.5|ISG20|ENSG00000172183.10|interferon stimulated exonuclease gene 20kDa
hg19_v2_chr18_+_3450161_3450210	0.249487	NKX2-1	ENST00000551402.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000577543.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr19_+_751122_751139	0.248736	NKX2-1	ENST00000215582.6|MISP|ENSG00000099812.6|mitotic spindle positioning
hg19_v2_chr22_-_30968813_30968829	0.245097	NKX2-1	ENST00000443111.2|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000443136.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000426220.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chrX_-_153236819_153236978	0.24484	NKX2-1	ENST00000354233.3|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr5_-_172662230_172662267	0.243941	NKX2-1	ENST00000424406.2|NKX2-5|ENSG00000183072.9|NK2 homeobox 5
hg19_v2_chr8_-_94752946_94753008	0.239818	NKX2-1	ENST00000519109.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr19_-_10679644_10679661	0.239426	NKX2-1	ENST00000393599.2|CDKN2D|ENSG00000129355.6|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
hg19_v2_chr20_-_22565101_22565223	0.228821	NKX2-1	ENST00000419308.2|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr21_+_33671264_33671283	0.228417	NKX2-1	ENST00000339944.4|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chrX_-_153237258_153237295	0.22581	NKX2-1	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr17_+_73642486_73642517	0.217548	NKX2-1	ENST00000579469.1|SMIM6|ENSG00000259120.2|small integral membrane protein 6
hg19_v2_chr16_+_66638003_66638244	0.213819	NKX2-1	ENST00000562357.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000360086.4|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000562707.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000361909.4|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000460097.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000565666.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3
hg19_v2_chr16_+_66638616_66638663	0.213625	NKX2-1	ENST00000564060.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3 	ENST00000565922.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3
hg19_v2_chr1_-_17338386_17338460	0.210106	NKX2-1	ENST00000341676.5|ATP13A2|ENSG00000159363.13|ATPase type 13A2 	ENST00000452699.1|ATP13A2|ENSG00000159363.13|ATPase type 13A2
hg19_v2_chr16_+_2022036_2022112	0.209756	NKX2-1	ENST00000568546.1|TBL3|ENSG00000183751.10|transducin (beta)-like 3
hg19_v2_chr1_-_153518270_153518361	0.208393	NKX2-1	ENST00000354332.4|S100A4|ENSG00000196154.7|S100 calcium binding protein A4 	ENST00000368716.4|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chrX_-_153236620_153236684	0.205534	NKX2-1	ENST00000369984.4|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr7_+_150782945_150782967	0.20316	NKX2-1	ENST00000463381.1|AGAP3|ENSG00000133612.14|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
hg19_v2_chr5_-_172662197_172662216	0.198095	NKX2-1	ENST00000521848.1|NKX2-5|ENSG00000183072.9|NK2 homeobox 5
hg19_v2_chr6_+_32121789_32121872	0.194166	NKX2-1	ENST00000437001.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000375137.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr22_+_24999114_24999202	0.188031	NKX2-1	ENST00000412658.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000445029.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000419133.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000400382.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000438643.2|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000452551.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000400383.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000412898.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000400380.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000455483.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1 	ENST00000430289.1|GGT1|ENSG00000100031.14|gamma-glutamyltransferase 1
hg19_v2_chr17_+_46048471_46048494	0.184711	NKX2-1	ENST00000578018.1|CDK5RAP3|ENSG00000108465.10|CDK5 regulatory subunit associated protein 3 	ENST00000579175.1|CDK5RAP3|ENSG00000108465.10|CDK5 regulatory subunit associated protein 3
hg19_v2_chr11_-_104827425_104827425	0.182929	NKX2-1	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr3_-_114790179_114790222	0.18026	NKX2-1	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr20_+_825275_825293	0.175486	NKX2-1	ENST00000541082.1|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr9_+_109685630_109685630	0.175457	NKX2-1	ENST00000451160.2|RP11-508N12.4|ENSG00000242631.2|Uncharacterized protein
hg19_v2_chr19_-_39390350_39390363	0.168489	NKX2-1	ENST00000447739.1|SIRT2|ENSG00000068903.15|sirtuin 2 	ENST00000358931.5|SIRT2|ENSG00000068903.15|sirtuin 2 	ENST00000407552.1|SIRT2|ENSG00000068903.15|sirtuin 2
hg19_v2_chr16_+_28303804_28303864	0.168041	NKX2-1	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr17_+_76210367_76210466	0.16718	NKX2-1	ENST00000592734.1|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5 	ENST00000587746.1|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5
hg19_v2_chrX_+_78003204_78003248	0.165631	NKX2-1	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr9_-_4299874_4299916	0.162553	NKX2-1	ENST00000381971.3|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3 	ENST00000477901.1|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3
hg19_v2_chr9_-_128246769_128246780	0.157838	NKX2-1	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr18_+_72166564_72166656	0.155483	NKX2-1	ENST00000583216.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000581912.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000582589.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr6_-_26056695_26056701	0.15194	NKX2-1	ENST00000343677.2|HIST1H1C|ENSG00000187837.2|histone cluster 1, H1c
hg19_v2_chr17_+_46048376_46048431	0.151887	NKX2-1	ENST00000338399.4|CDK5RAP3|ENSG00000108465.10|CDK5 regulatory subunit associated protein 3
hg19_v2_chr1_-_156051789_156051838	0.151382	NKX2-1	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr7_+_99156249_99156311	0.146882	NKX2-1	ENST00000449244.1|ZNF655|ENSG00000197343.6|zinc finger protein 655
hg19_v2_chr21_+_45773515_45773571	0.146379	NKX2-1	ENST00000397932.2|TRPM2|ENSG00000142185.12|transient receptor potential cation channel, subfamily M, member 2 	ENST00000300481.9|TRPM2|ENSG00000142185.12|transient receptor potential cation channel, subfamily M, member 2
hg19_v2_chr8_-_144679264_144679283	0.138304	NKX2-1	ENST00000531953.1|EEF1D|ENSG00000104529.13|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 	ENST00000526133.1|EEF1D|ENSG00000104529.13|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
hg19_v2_chr7_+_99156212_99156244	0.137431	NKX2-1	ENST00000454654.1|ZNF655|ENSG00000197343.6|zinc finger protein 655
hg19_v2_chr3_-_139195350_139195370	0.137254	NKX2-1	ENST00000232217.2|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr7_+_150758642_150758685	0.136954	NKX2-1	ENST00000488420.1|SLC4A2|ENSG00000164889.8|solute carrier family 4 (anion exchanger), member 2
hg19_v2_chr16_+_57126428_57126450	0.136742	NKX2-1	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr16_+_5121814_5121855	0.135747	NKX2-1	ENST00000262374.5|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 	ENST00000586840.1|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
hg19_v2_chr2_-_25451065_25451090	0.13499	NKX2-1	ENST00000606328.1|RP11-458N5.1|ENSG00000272048.1|RP11-458N5.1
hg19_v2_chr1_-_25291475_25291511	0.134429	NKX2-1	ENST00000338888.3|RUNX3|ENSG00000020633.14|runt-related transcription factor 3 	ENST00000399916.1|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr16_+_66638567_66638615	0.132942	NKX2-1	ENST00000567572.1|CMTM3|ENSG00000140931.15|CKLF-like MARVEL transmembrane domain containing 3
hg19_v2_chr2_+_101591314_101591333	0.132336	NKX2-1	ENST00000450763.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr4_-_54930790_54930857	0.130898	NKX2-1	ENST00000263921.3|CHIC2|ENSG00000109220.6|cysteine-rich hydrophobic domain 2
hg19_v2_chr17_-_46035187_46035260	0.130169	NKX2-1	ENST00000300557.2|PRR15L|ENSG00000167183.2|proline rich 15-like
hg19_v2_chr1_-_68698222_68698266	0.126326	NKX2-1	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr1_+_15736359_15736463	0.122569	NKX2-1	ENST00000375980.4|EFHD2|ENSG00000142634.8|EF-hand domain family, member D2
hg19_v2_chr17_+_73642315_73642344	0.121688	NKX2-1	ENST00000556126.2|SMIM6|ENSG00000259120.2|small integral membrane protein 6
hg19_v2_chr12_+_121416489_121416552	0.12004	NKX2-1	ENST00000541395.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A 	ENST00000544413.1|HNF1A|ENSG00000135100.13|HNF1 homeobox A
hg19_v2_chr6_-_117747015_117747048	0.117358	NKX2-1	ENST00000368508.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase 	ENST00000368507.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase
hg19_v2_chr3_+_184056614_184056641	0.116768	NKX2-1	ENST00000453072.1|FAM131A|ENSG00000175182.9|family with sequence similarity 131, member A
hg19_v2_chr3_+_187930429_187930477	0.11097	NKX2-1	ENST00000420410.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr6_+_32121218_32121354	0.11052	NKX2-1	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr8_-_38326119_38326134	0.110265	NKX2-1	ENST00000356207.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000326324.6|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr12_-_67197760_67198052	0.109384	NKX2-1	ENST00000539540.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000540433.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000541947.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538373.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr1_-_160232197_160232284	0.108633	NKX2-1	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr16_+_57126482_57126552	0.108203	NKX2-1	ENST00000537605.1|CPNE2|ENSG00000140848.12|copine II 	ENST00000535318.2|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr17_-_42466864_42466880	0.106909	NKX2-1	ENST00000353281.4|ITGA2B|ENSG00000005961.13|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) 	ENST00000262407.5|ITGA2B|ENSG00000005961.13|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
hg19_v2_chr4_+_184826418_184826522	0.106198	NKX2-1	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr1_+_206643806_206643850	0.106154	NKX2-1	ENST00000537984.1|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr2_-_230787879_230787955	0.102873	NKX2-1	ENST00000435716.1|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12
hg19_v2_chr19_+_39390320_39390346	0.102845	NKX2-1	ENST00000576510.1|NFKBIB|ENSG00000104825.12|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
hg19_v2_chr11_-_86383650_86383678	0.101495	NKX2-1	ENST00000526944.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000530335.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000543262.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000524826.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr19_-_17622269_17622341	0.0963134	NKX2-1	ENST00000595116.1|CTD-3131K8.2|ENSG00000269439.1|CTD-3131K8.2
hg19_v2_chr19_-_45748628_45748687	0.0944973	NKX2-1	ENST00000590022.1|AC006126.4|ENSG00000267045.1|AC006126.4
hg19_v2_chr6_-_134373732_134373795	0.0916284	NKX2-1	ENST00000275230.5|SLC2A12|ENSG00000146411.5|solute carrier family 2 (facilitated glucose transporter), member 12
hg19_v2_chr18_+_29171689_29171847	0.0909183	NKX2-1	ENST00000237014.3|TTR|ENSG00000118271.5|transthyretin
hg19_v2_chr17_+_46048497_46048517	0.0904027	NKX2-1	ENST00000583352.1|CDK5RAP3|ENSG00000108465.10|CDK5 regulatory subunit associated protein 3
hg19_v2_chr17_+_61086917_61086921	0.0892393	NKX2-1	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr5_+_131705438_131705462	0.0885893	NKX2-1	ENST00000245407.3|SLC22A5|ENSG00000197375.8|solute carrier family 22 (organic cation/carnitine transporter), member 5
hg19_v2_chr19_+_48972459_48972490	0.0881832	NKX2-1	ENST00000427476.1|CYTH2|ENSG00000105443.9|cytohesin 2
hg19_v2_chr5_-_58335281_58335339	0.0866713	NKX2-1	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_-_15735925_15735938	0.0837325	NKX2-1	ENST00000427824.1|RP3-467K16.4|ENSG00000228140.1|RP3-467K16.4
hg19_v2_chr19_+_24009879_24009921	0.081904	NKX2-1	ENST00000354585.4|RPSAP58|ENSG00000205246.4|ribosomal protein SA pseudogene 58
hg19_v2_chrX_+_22056165_22056173	0.07758	NKX2-1	ENST00000535894.1|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr9_-_34397800_34397830	0.0769679	NKX2-1	ENST00000297623.2|C9orf24|ENSG00000164972.8|chromosome 9 open reading frame 24
hg19_v2_chr12_+_6961279_6961343	0.0741343	NKX2-1	ENST00000229268.8|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T) 	ENST00000389231.5|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T) 	ENST00000542087.1|USP5|ENSG00000111667.9|ubiquitin specific peptidase 5 (isopeptidase T)
hg19_v2_chr5_-_146889619_146889639	0.0737695	NKX2-1	ENST00000343218.5|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr3_+_187930491_187930511	0.0717961	NKX2-1	ENST00000443217.1|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr11_-_65325430_65325560	0.0712244	NKX2-1	ENST00000322147.4|LTBP3|ENSG00000168056.10|latent transforming growth factor beta binding protein 3
hg19_v2_chrX_-_70473957_70474049	0.0709701	NKX2-1	ENST00000373984.3|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000314425.5|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373982.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr8_+_37654693_37654774	0.0703695	NKX2-1	ENST00000412232.2|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr12_-_719573_719594	0.0679825	NKX2-1	ENST00000397265.3|NINJ2|ENSG00000171840.7|ninjurin 2
hg19_v2_chr14_-_58893876_58893924	0.0675712	NKX2-1	ENST00000555097.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast) 	ENST00000555404.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr1_+_206643787_206643803	0.0675536	NKX2-1	ENST00000367120.3|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr12_+_18414446_18414474	0.0672438	NKX2-1	ENST00000433979.1|PIK3C2G|ENSG00000139144.5|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
hg19_v2_chr17_+_76210267_76210366	0.0667903	NKX2-1	ENST00000301633.4|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5 	ENST00000350051.3|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5 	ENST00000374948.2|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5 	ENST00000590449.1|BIRC5|ENSG00000089685.10|baculoviral IAP repeat containing 5
hg19_v2_chrX_-_70474377_70474425	0.0643673	NKX2-1	ENST00000373978.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373981.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr17_-_1508379_1508458	0.0610373	NKX2-1	ENST00000412517.3|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr12_-_10978957_10978957	0.058809	NKX2-1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr7_+_99156145_99156207	0.0576441	NKX2-1	ENST00000452314.1|ZNF655|ENSG00000197343.6|zinc finger protein 655 	ENST00000252713.4|ZNF655|ENSG00000197343.6|zinc finger protein 655
hg19_v2_chr4_+_144354644_144354734	0.0543031	NKX2-1	ENST00000512843.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_+_55464600_55464608	0.0534767	NKX2-1	ENST00000371265.4|BSND|ENSG00000162399.6|Bartter syndrome, infantile, with sensorineural deafness (Barttin)
hg19_v2_chr19_+_48958766_48958862	0.0531469	NKX2-1	ENST00000342291.2|KCNJ14|ENSG00000182324.5|potassium inwardly-rectifying channel, subfamily J, member 14
hg19_v2_chr17_+_66521936_66522026	0.0523859	NKX2-1	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr10_+_63808970_63808990	0.0499677	NKX2-1	ENST00000309334.5|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr19_+_48972265_48972298	0.04716	NKX2-1	ENST00000452733.2|CYTH2|ENSG00000105443.9|cytohesin 2
hg19_v2_chr1_-_153538292_153538342	0.0468042	NKX2-1	ENST00000497140.1|S100A2|ENSG00000196754.6|S100 calcium binding protein A2 	ENST00000368708.3|S100A2|ENSG00000196754.6|S100 calcium binding protein A2
hg19_v2_chr14_+_74815116_74815202	0.046641	NKX2-1	ENST00000256362.4|VRTN|ENSG00000133980.4|vertebrae development associated
hg19_v2_chr22_+_24891210_24891310	0.0461732	NKX2-1	ENST00000382760.2|UPB1|ENSG00000100024.10|ureidopropionase, beta
hg19_v2_chr19_+_39903185_39903232	0.0458876	NKX2-1	ENST00000409794.3|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg19_v2_chr9_-_7800067_7800067	0.0454897	NKX2-1	ENST00000358227.4|TMEM261|ENSG00000137038.7|transmembrane protein 261
hg19_v2_chr15_-_94614049_94614115	0.0454397	NKX2-1	ENST00000556447.1|CTD-3049M7.1|ENSG00000258754.3|CTD-3049M7.1	ENST00000555772.1|CTD-3049M7.1|ENSG00000258754.3|CTD-3049M7.1
hg19_v2_chr18_-_24283586_24283611	0.0433222	NKX2-1	ENST00000579458.1|U3|ENSG00000265369.2|Small nucleolar RNA U3
hg19_v2_chr12_+_13349711_13349728	0.0428747	NKX2-1	ENST00000538364.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000396301.3|EMP1|ENSG00000134531.5|epithelial membrane protein 1
hg19_v2_chr1_-_41487383_41487402	0.0426389	NKX2-1	ENST00000302946.8|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000372613.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000439569.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000397197.2|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr14_+_74353320_74353469	0.0426135	NKX2-1	ENST00000540593.1|ZNF410|ENSG00000119725.13|zinc finger protein 410 	ENST00000555730.1|ZNF410|ENSG00000119725.13|zinc finger protein 410
hg19_v2_chr8_-_114389353_114389387	0.0422742	NKX2-1	ENST00000343508.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr17_-_34195889_34195899	0.0390218	NKX2-1	ENST00000311880.2|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chr18_-_13915530_13915540	0.0370624	NKX2-1	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr17_-_34195862_34195877	0.0354857	NKX2-1	ENST00000592980.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66 	ENST00000587626.1|C17orf66|ENSG00000172653.7|chromosome 17 open reading frame 66
hg19_v2_chr9_+_133986782_133986794	0.0342488	NKX2-1	ENST00000372301.2|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like
hg19_v2_chr8_+_145203548_145203548	0.031966	NKX2-1	ENST00000534366.1|MROH1|ENSG00000179832.13|maestro heat-like repeat family member 1
hg19_v2_chr10_-_98031265_98031306	0.0315523	NKX2-1	ENST00000224337.5|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000371176.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr17_+_40610862_40611087	0.0304721	NKX2-1	ENST00000393829.2|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000546249.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000537728.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000264649.6|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000585525.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000343619.4|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000544137.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000589727.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000587824.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1
hg19_v2_chr8_-_144679296_144679338	0.0278616	NKX2-1	ENST00000317198.6|EEF1D|ENSG00000104529.13|eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
hg19_v2_chr9_-_5830768_5830787	0.0273133	NKX2-1	ENST00000381506.3|ERMP1|ENSG00000099219.9|endoplasmic reticulum metallopeptidase 1
hg19_v2_chr4_+_26165074_26165110	0.0270926	NKX2-1	ENST00000512351.1|RBPJ|ENSG00000168214.16|recombination signal binding protein for immunoglobulin kappa J region
hg19_v2_chr19_+_1942453_1942485	0.0257494	NKX2-1	ENST00000591752.1|CSNK1G2|ENSG00000133275.11|casein kinase 1, gamma 2
hg19_v2_chrX_+_86772787_86772817	0.0235325	NKX2-1	ENST00000373114.4|KLHL4|ENSG00000102271.9|kelch-like family member 4
hg19_v2_chr5_+_140345820_140345820	0.0230256	NKX2-1	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr8_+_77596014_77596033	0.0222465	NKX2-1	ENST00000523885.1|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chrX_-_110655306_110655330	0.021567	NKX2-1	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr12_+_50478977_50479040	0.0199742	NKX2-1	ENST00000381513.4|SMARCD1|ENSG00000066117.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v2_chr3_+_187930719_187930729	0.0191786	NKX2-1	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_-_62190793_62190822	0.0185002	NKX2-1	ENST00000371177.2|TM2D1|ENSG00000162604.8|TM2 domain containing 1 	ENST00000606498.1|TM2D1|ENSG00000162604.8|TM2 domain containing 1
hg19_v2_chr1_-_92952433_92952489	0.017947	NKX2-1	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr8_+_145065521_145065622	0.0175024	NKX2-1	ENST00000534791.1|GRINA|ENSG00000178719.12|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v2_chr11_-_65325203_65325275	0.0165573	NKX2-1	ENST00000526927.1|LTBP3|ENSG00000168056.10|latent transforming growth factor beta binding protein 3 	ENST00000536982.1|LTBP3|ENSG00000168056.10|latent transforming growth factor beta binding protein 3
hg19_v2_chr19_+_1065922_1065970	0.0135214	NKX2-1	ENST00000539243.2|HMHA1|ENSG00000180448.6|histocompatibility (minor) HA-1
hg19_v2_chr8_+_145065705_145065731	0.0133041	NKX2-1	ENST00000533044.1|GRINA|ENSG00000178719.12|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v2_chr2_-_133429091_133429152	0.0131979	NKX2-1	ENST00000345008.6|LYPD1|ENSG00000150551.10|LY6/PLAUR domain containing 1
hg19_v2_chr3_-_52029958_52029974	0.0124999	NKX2-1	ENST00000294189.6|RPL29|ENSG00000162244.6|ribosomal protein L29
hg19_v2_chr1_-_41487415_41487426	0.0124535	NKX2-1	ENST00000372611.1|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr2_-_225266802_225266830	0.0113399	NKX2-1	ENST00000243806.2|FAM124B|ENSG00000124019.9|family with sequence similarity 124B
hg19_v2_chr17_-_8198636_8198724	0.0112796	NKX2-1	ENST00000577745.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35 	ENST00000579192.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35 	ENST00000396278.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35
hg19_v2_chrX_-_70474499_70474564	0.0105218	NKX2-1	ENST00000353904.2|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr20_+_30407105_30407116	0.00801587	NKX2-1	ENST00000375994.2|MYLK2|ENSG00000101306.6|myosin light chain kinase 2
hg19_v2_chr11_+_22688150_22688192	0.00678477	NKX2-1	ENST00000454584.2|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr1_+_32930647_32930684	0.00635597	NKX2-1	ENST00000609129.1|ZBTB8B|ENSG00000273274.1|zinc finger and BTB domain containing 8B
hg19_v2_chr17_+_59529743_59529798	0.006082	NKX2-1	ENST00000589003.1|TBX4|ENSG00000121075.5|T-box 4 	ENST00000393853.4|TBX4|ENSG00000121075.5|T-box 4
hg19_v2_chr2_+_85646054_85646054	0.00567568	NKX2-1	ENST00000389938.2|SH2D6|ENSG00000152292.12|SH2 domain containing 6
hg19_v2_chr2_-_152118352_152118393	0.00429676	NKX2-1	ENST00000331426.5|RBM43|ENSG00000184898.6|RNA binding motif protein 43
hg19_v2_chr11_-_88796803_88796827	0.0039566	NKX2-1	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr6_-_41673552_41673678	0.00347836	NKX2-1	ENST00000419574.1|TFEB|ENSG00000112561.13|transcription factor EB 	ENST00000445214.1|TFEB|ENSG00000112561.13|transcription factor EB
hg19_v2_chr17_-_3499125_3499125	0.00169343	NKX2-1	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr16_-_18937072_18937072	0.00136347	NKX2-1	ENST00000569122.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr1_-_182369751_182369777	0.000195649	NKX2-1	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr20_-_56285595_56285656	2.61943e-05	NKX2-1	ENST00000395816.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000347215.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
