hg19_v2_chr2_+_8822113_8822196	0.307455	NKX1-1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr12_+_16500599_16500731	0.261518	NKX1-1	ENST00000535309.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540056.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396209.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540126.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr12_+_16500037_16500076	0.20249	NKX1-1	ENST00000536371.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000010404.2|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr14_-_88200641_88200643	0.191996	NKX1-1	ENST00000556168.1|RP11-1152H15.1|ENSG00000258807.1|RP11-1152H15.1
hg19_v2_chr12_+_16500571_16500598	0.183645	NKX1-1	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr17_-_57232525_57232584	0.169472	NKX1-1	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr5_+_66300464_66300505	0.156032	NKX1-1	ENST00000436277.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr8_-_94928861_94928910	0.147552	NKX1-1	ENST00000607097.1|MIR378D2|ENSG00000264448.2|microRNA 378d-2
hg19_v2_chr17_-_45266542_45266683	0.138854	NKX1-1	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr1_+_100818156_100818210	0.136793	NKX1-1	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr5_-_159546396_159546470	0.128787	NKX1-1	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr7_-_27239703_27239725	0.121921	NKX1-1	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr17_-_57232596_57232630	0.115166	NKX1-1	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr18_-_33709268_33709380	0.114821	NKX1-1	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr1_+_100818009_100818072	0.113418	NKX1-1	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr15_-_78526942_78527049	0.113235	NKX1-1	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr3_-_105588231_105588396	0.111892	NKX1-1	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr12_+_64798826_64798936	0.110268	NKX1-1	ENST00000540203.1|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr20_-_17662705_17662874	0.10876	NKX1-1	ENST00000455029.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr8_+_94929273_94929284	0.107486	NKX1-1	ENST00000518573.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr6_-_80247105_80247133	0.107098	NKX1-1	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chrX_-_153363125_153363182	0.107052	NKX1-1	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr11_-_4629367_4629384	0.105778	NKX1-1	ENST00000533021.1|TRIM68|ENSG00000167333.8|tripartite motif containing 68
hg19_v2_chr7_-_6048702_6048756	0.101117	NKX1-1	ENST00000265849.7|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr19_+_32896697_32896786	0.100484	NKX1-1	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr1_-_151762943_151763012	0.0988541	NKX1-1	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr1_-_159915386_159915426	0.0953476	NKX1-1	ENST00000361509.3|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9 	ENST00000368094.1|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9
hg19_v2_chr6_-_82957433_82957477	0.0941817	NKX1-1	ENST00000306270.7|IBTK|ENSG00000005700.10|inhibitor of Bruton agammaglobulinemia tyrosine kinase
hg19_v2_chr10_-_1095050_1095110	0.093946	NKX1-1	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr3_+_186288454_186288535	0.0915109	NKX1-1	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr10_+_120789223_120789231	0.0878303	NKX1-1	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr7_-_33102399_33102411	0.0860371	NKX1-1	ENST00000242210.7|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr7_-_33102338_33102395	0.084217	NKX1-1	ENST00000610140.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr7_+_99647389_99647410	0.0819596	NKX1-1	ENST00000543588.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000292450.4|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000456748.2|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chr3_-_105587879_105587892	0.079785	NKX1-1	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr17_+_57233087_57233146	0.0768419	NKX1-1	ENST00000578777.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577457.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000582995.1|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr4_+_87515454_87515486	0.071553	NKX1-1	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr8_+_98656693_98656774	0.0713495	NKX1-1	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr16_-_66864806_66864900	0.0707998	NKX1-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr8_+_26371763_26371791	0.0669494	NKX1-1	ENST00000521913.1|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr8_+_94929077_94929106	0.0663277	NKX1-1	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr10_-_1094819_1094890	0.0661576	NKX1-1	ENST00000429642.1|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr1_+_174843548_174843609	0.0657083	NKX1-1	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chrX_+_19362011_19362122	0.0651745	NKX1-1	ENST00000379806.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000545074.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000540249.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000423505.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000417819.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000422285.2|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000355808.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000379805.3|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr7_+_70597109_70597155	0.0635966	NKX1-1	ENST00000333538.5|WBSCR17|ENSG00000185274.7|Williams-Beuren syndrome chromosome region 17
hg19_v2_chr19_-_8070474_8070564	0.0632919	NKX1-1	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr13_+_78315348_78315360	0.0620487	NKX1-1	ENST00000441784.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr7_-_6048650_6048687	0.059114	NKX1-1	ENST00000382321.4|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 	ENST00000406569.3|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr17_-_44439084_44439130	0.0586406	NKX1-1	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr12_+_28410128_28410133	0.0581333	NKX1-1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr1_+_155278625_155278745	0.056922	NKX1-1	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr3_+_57261743_57261824	0.0562095	NKX1-1	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr7_-_143892748_143892748	0.0556721	NKX1-1	ENST00000378115.2|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr19_+_32897009_32897095	0.054377	NKX1-1	ENST00000342179.5|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans) 	ENST00000586427.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr1_+_155278539_155278559	0.0503827	NKX1-1	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr2_-_47142884_47143007	0.0489375	NKX1-1	ENST00000409105.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409973.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409913.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000319466.4|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr19_-_14228541_14228582	0.0489276	NKX1-1	ENST00000590853.1|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha 	ENST00000308677.4|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha
hg19_v2_chr8_+_94929168_94929235	0.0467363	NKX1-1	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr17_+_59489112_59489112	0.0454475	NKX1-1	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr1_-_151762900_151762910	0.0447809	NKX1-1	ENST00000440583.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr16_-_2318111_2318147	0.0440995	NKX1-1	ENST00000301730.8|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000564822.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr1_-_197115818_197115829	0.0437474	NKX1-1	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr1_+_62439037_62439047	0.0436478	NKX1-1	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr3_+_186560476_186560505	0.0434013	NKX1-1	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr1_-_159832438_159832449	0.0433522	NKX1-1	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr3_+_23851928_23851951	0.0430883	NKX1-1	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr4_-_54232144_54232267	0.0414295	NKX1-1	ENST00000388940.4|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000503450.1|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000401642.3|SCFD2|ENSG00000184178.11|sec1 family domain containing 2
hg19_v2_chr21_-_37914898_37914918	0.0383224	NKX1-1	ENST00000399136.1|CLDN14|ENSG00000159261.6|claudin 14
hg19_v2_chr11_-_105892937_105893130	0.0376293	NKX1-1	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr3_-_59035673_59035810	0.0374234	NKX1-1	ENST00000491845.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000472469.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000471288.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000295966.7|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67
hg19_v2_chr12_-_102513843_102513908	0.036311	NKX1-1	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr17_+_57232690_57232860	0.0362265	NKX1-1	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr3_+_186560462_186560473	0.0351864	NKX1-1	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr17_-_44657017_44657088	0.0350491	NKX1-1	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr12_+_102513950_102513996	0.0348326	NKX1-1	ENST00000378128.3|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000327680.2|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000541394.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000543784.1|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr19_-_6424783_6424805	0.0341779	NKX1-1	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr19_+_54641444_54641504	0.0329173	NKX1-1	ENST00000221232.5|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3 	ENST00000358389.3|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3
hg19_v2_chr7_+_144052381_144052509	0.0326648	NKX1-1	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr1_-_28969517_28969605	0.0306194	NKX1-1	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr7_+_26331541_26331647	0.0306115	NKX1-1	ENST00000416246.1|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000338523.4|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000412416.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr11_-_71823715_71823792	0.0282421	NKX1-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr6_-_167040731_167040745	0.0271519	NKX1-1	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr15_+_64386261_64386322	0.0247342	NKX1-1	ENST00000560829.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr19_+_36249057_36249102	0.0243551	NKX1-1	ENST00000301165.5|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000536950.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000537459.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000421853.2|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55
hg19_v2_chr6_-_167040693_167040725	0.0243265	NKX1-1	ENST00000366863.2|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr11_-_71823796_71823826	0.0243093	NKX1-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr8_+_22132810_22132844	0.0207065	NKX1-1	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr2_-_239197238_239197256	0.020567	NKX1-1	ENST00000254657.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr11_-_59383617_59383617	0.0201945	NKX1-1	ENST00000263847.1|OSBP|ENSG00000110048.7|oxysterol binding protein
hg19_v2_chrX_+_72783026_72783049	0.0200756	NKX1-1	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr18_+_55888767_55888809	0.0185389	NKX1-1	ENST00000431212.2|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000586268.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000587190.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr7_+_12727250_12727265	0.0175485	NKX1-1	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr12_+_7013897_7014045	0.0175115	NKX1-1	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr8_+_98656336_98656535	0.017268	NKX1-1	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr2_-_167232484_167232503	0.016641	NKX1-1	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr7_+_6048856_6048967	0.0158941	NKX1-1	ENST00000223029.3|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 	ENST00000400479.2|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 	ENST00000395236.2|AIMP2|ENSG00000106305.5|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
hg19_v2_chr8_+_22132847_22132876	0.0152297	NKX1-1	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr4_-_66536196_66536216	0.0137874	NKX1-1	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr16_-_2318055_2318104	0.0135653	NKX1-1	ENST00000561518.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000561718.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000567147.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000562690.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000569598.2|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr2_-_47143160_47143251	0.011999	NKX1-1	ENST00000409800.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409218.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr10_+_1095416_1095482	0.0118566	NKX1-1	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr2_+_187371440_187371567	0.0111309	NKX1-1	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr4_+_128554081_128554121	0.0104727	NKX1-1	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr12_+_102514019_102514035	0.0102573	NKX1-1	ENST00000537257.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000358383.5|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000392911.2|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr6_+_26501449_26501449	0.00998146	NKX1-1	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chr1_-_108507631_108507809	0.00912018	NKX1-1	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr2_-_239197201_239197212	0.00900811	NKX1-1	ENST00000254658.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr4_+_66536248_66536345	0.00897672	NKX1-1	ENST00000514260.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1	ENST00000507117.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1
hg19_v2_chr9_+_124329336_124329406	0.00865526	NKX1-1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr18_-_44181442_44181479	0.00714773	NKX1-1	ENST00000398722.4|LOXHD1|ENSG00000167210.12|lipoxygenase homology domains 1
hg19_v2_chr8_+_94929110_94929167	0.00561812	NKX1-1	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr4_-_66536057_66536071	0.00477438	NKX1-1	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr15_-_64386120_64386217	0.00413954	NKX1-1	ENST00000300030.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr10_-_99205607_99205779	0.00386912	NKX1-1	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr22_+_17956618_17956637	0.00372049	NKX1-1	ENST00000262608.8|CECR2|ENSG00000099954.14|cat eye syndrome chromosome region, candidate 2
hg19_v2_chr4_-_103682145_103682157	0.00340703	NKX1-1	ENST00000226578.4|MANBA|ENSG00000109323.4|mannosidase, beta A, lysosomal
hg19_v2_chr12_+_7014064_7014075	0.00268009	NKX1-1	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr11_-_4629388_4629489	0.00200999	NKX1-1	ENST00000526337.1|TRIM68|ENSG00000167333.8|tripartite motif containing 68 	ENST00000300747.5|TRIM68|ENSG00000167333.8|tripartite motif containing 68
hg19_v2_chr7_+_26331678_26331690	0.000437238	NKX1-1	ENST00000446848.2|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr11_-_47198380_47198448	0.00016229	NKX1-1	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr1_-_231004220_231004399	4.93236e-05	NKX1-1	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
