hg19_v2_chr15_-_75199213_75199237	0.134865	ISX	ENST00000562698.1|FAM219B|ENSG00000178761.10|family with sequence similarity 219, member B
hg19_v2_chr9_-_75488984_75489052	0.125967	ISX	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr16_+_12059091_12059207	0.110345	ISX	ENST00000562385.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr7_-_86849836_86849866	0.101385	ISX	ENST00000455575.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr17_-_18266818_18266872	0.0925779	ISX	ENST00000583780.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr1_+_32666188_32666274	0.0909819	ISX	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr19_-_4717835_4717900	0.0812996	ISX	ENST00000599248.1|DPP9|ENSG00000142002.12|dipeptidyl-peptidase 9
hg19_v2_chr22_+_46476192_46476222	0.0773905	ISX	ENST00000443490.1|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr14_-_88200641_88200643	0.0748881	ISX	ENST00000556168.1|RP11-1152H15.1|ENSG00000258807.1|RP11-1152H15.1
hg19_v2_chr20_-_50418947_50418964	0.0721369	ISX	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr11_-_95523500_95523580	0.0693074	ISX	ENST00000540054.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr8_+_110552046_110552069	0.0669783	ISX	ENST00000529931.1|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr12_-_10978957_10978957	0.0663055	ISX	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr16_+_3333443_3333545	0.0582461	ISX	ENST00000572748.1|ZNF263|ENSG00000006194.6|zinc finger protein 263 	ENST00000573578.1|ZNF263|ENSG00000006194.6|zinc finger protein 263 	ENST00000574253.1|ZNF263|ENSG00000006194.6|zinc finger protein 263
hg19_v2_chr3_-_129147432_129147494	0.0581117	ISX	ENST00000503957.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000505956.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000326085.3|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12
hg19_v2_chr14_-_51027838_51027851	0.0563107	ISX	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr1_+_120839005_120839031	0.0558899	ISX	ENST00000369390.3|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B 	ENST00000452190.1|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B
hg19_v2_chr14_+_70233810_70233874	0.0542817	ISX	ENST00000394366.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553548.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553369.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000557154.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000451983.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553635.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5
hg19_v2_chrX_-_47509994_47510008	0.0534704	ISX	ENST00000343894.4|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chr4_+_66536248_66536345	0.0532684	ISX	ENST00000514260.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1	ENST00000507117.1|RP11-807H7.1|ENSG00000250846.2|RP11-807H7.1
hg19_v2_chr1_+_206138457_206138503	0.0518987	ISX	ENST00000367128.3|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A 	ENST00000431655.2|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A
hg19_v2_chr1_-_143913143_143913143	0.051849	ISX	ENST00000400889.1|FAM72D|ENSG00000215784.4|family with sequence similarity 72, member D
hg19_v2_chr9_+_130159433_130159461	0.0516998	ISX	ENST00000451404.1|SLC2A8|ENSG00000136856.13|solute carrier family 2 (facilitated glucose transporter), member 8
hg19_v2_chr8_+_38831683_38831702	0.05134	ISX	ENST00000302495.4|HTRA4|ENSG00000169495.4|HtrA serine peptidase 4
hg19_v2_chr17_-_12920994_12921005	0.0505026	ISX	ENST00000609101.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2
hg19_v2_chr17_-_12920907_12920987	0.0504141	ISX	ENST00000609757.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2 	ENST00000581499.2|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2 	ENST00000580504.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2
hg19_v2_chr3_-_15563229_15563265	0.0494581	ISX	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr11_+_77532233_77532244	0.0493066	ISX	ENST00000525409.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing
hg19_v2_chr1_-_158173659_158173674	0.0492912	ISX	ENST00000415019.1|RP11-404O13.5|ENSG00000176320.2|RP11-404O13.5
hg19_v2_chr6_+_3259148_3259294	0.04845	ISX	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr3_-_186288097_186288113	0.0479431	ISX	ENST00000446782.1|TBCCD1|ENSG00000113838.8|TBCC domain containing 1
hg19_v2_chr4_-_48018680_48018704	0.0460734	ISX	ENST00000513178.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr5_-_98262240_98262240	0.0457633	ISX	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr1_+_28261621_28261657	0.0450661	ISX	ENST00000549094.1|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v2_chr2_-_183387064_183387129	0.0442047	ISX	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr10_+_91461413_91461436	0.0441802	ISX	ENST00000447580.1|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr7_-_112635675_112635720	0.044106	ISX	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr14_-_24711764_24711792	0.0436468	ISX	ENST00000557921.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558476.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr11_+_5712234_5712264	0.0436338	ISX	ENST00000414641.1|TRIM22|ENSG00000132274.11|tripartite motif containing 22
hg19_v2_chr17_-_7307358_7307456	0.0436222	ISX	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr16_-_3493528_3493542	0.0419968	ISX	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr17_-_38821373_38821440	0.0419903	ISX	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr2_+_177015122_177015122	0.0417894	ISX	ENST00000468418.3|HOXD3|ENSG00000128652.7|homeobox D3
hg19_v2_chr1_-_36916066_36916092	0.0398823	ISX	ENST00000315643.9|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr12_+_104680793_104680837	0.0388239	ISX	ENST00000529546.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000529751.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000540716.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000528079.2|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000526580.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr16_+_3070356_3070383	0.0378381	ISX	ENST00000341627.5|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575124.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575836.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr20_-_50418972_50419029	0.0375003	ISX	ENST00000395997.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr6_-_30080876_30080883	0.0369106	ISX	ENST00000376734.3|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr1_+_87595433_87595457	0.0365607	ISX	ENST00000469312.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140 	ENST00000490006.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140
hg19_v2_chr6_-_32095968_32096032	0.0362703	ISX	ENST00000375203.3|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta 	ENST00000375201.4|ATF6B|ENSG00000213676.6|activating transcription factor 6 beta
hg19_v2_chr12_-_10022735_10022735	0.036242	ISX	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr22_+_24309089_24309089	0.0362309	ISX	ENST00000215770.5|DDTL|ENSG00000099974.7|D-dopachrome tautomerase-like
hg19_v2_chr22_+_21400229_21400276	0.0361728	ISX	ENST00000342608.4|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000543388.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000442047.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891
hg19_v2_chr5_-_137374288_137374311	0.0357586	ISX	ENST00000514310.1|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr17_+_46970134_46970170	0.0343484	ISX	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr14_-_73925225_73925323	0.0340437	ISX	ENST00000356296.4|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000355058.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000359560.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000557597.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555238.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000535282.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555987.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554546.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr3_-_113775328_113775460	0.0339723	ISX	ENST00000483766.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000545063.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000491000.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000295878.3|KIAA1407|ENSG00000163617.6|KIAA1407
hg19_v2_chr12_+_16500571_16500598	0.0339544	ISX	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr8_+_9953061_9953097	0.0331635	ISX	ENST00000522907.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A 	ENST00000528246.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr21_+_35014829_35014912	0.0323622	ISX	ENST00000451686.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr21_+_35014706_35014767	0.0319508	ISX	ENST00000399353.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000444491.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381318.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr21_+_35014783_35014816	0.031139	ISX	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr5_-_177580855_177580927	0.0309616	ISX	ENST00000514354.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein 	ENST00000511078.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr17_+_50939459_50939481	0.0308427	ISX	ENST00000412360.1|AC102948.2|ENSG00000226364.1|Uncharacterized protein
hg19_v2_chr6_-_111927062_111927125	0.0307049	ISX	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr14_+_104182061_104182072	0.0306953	ISX	ENST00000216602.6|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr1_-_21620877_21620963	0.0306251	ISX	ENST00000527991.1|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr1_-_23670752_23670803	0.0302479	ISX	ENST00000302271.6|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R 	ENST00000426846.2|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R 	ENST00000427764.2|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R 	ENST00000606561.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R 	ENST00000374616.3|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr17_+_46970127_46970132	0.0300387	ISX	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr12_+_7014126_7014192	0.0297203	ISX	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr6_-_30080863_30080872	0.0290404	ISX	ENST00000540829.1|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr1_-_161208013_161208092	0.0285281	ISX	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr7_+_150929550_150929619	0.0284345	ISX	ENST00000482173.1|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2 	ENST00000495645.1|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2 	ENST00000035307.2|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2
hg19_v2_chr6_+_64345698_64345750	0.028138	ISX	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr12_+_70574088_70574135	0.0278199	ISX	ENST00000552324.1|RP11-320P7.2|ENSG00000257139.1|RP11-320P7.2
hg19_v2_chrX_-_47509887_47509990	0.027682	ISX	ENST00000247161.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000592066.1|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000376983.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chrX_-_153363125_153363182	0.0269429	ISX	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr2_-_228244013_228244027	0.0268924	ISX	ENST00000304568.3|TM4SF20|ENSG00000168955.3|transmembrane 4 L six family member 20
hg19_v2_chr2_+_242089833_242089913	0.0262546	ISX	ENST00000404405.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000439916.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000406106.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000401987.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7
hg19_v2_chr5_-_177580933_177580968	0.0259824	ISX	ENST00000274606.3|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr19_-_51071302_51071302	0.0258041	ISX	ENST00000389201.3|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B 	ENST00000600381.1|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B
hg19_v2_chr19_-_3557570_3557590	0.0255153	ISX	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr12_+_104680659_104680777	0.0254062	ISX	ENST00000526691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531691.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000388854.3|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000354940.6|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000526390.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1 	ENST00000531689.1|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr1_-_197115818_197115829	0.0244937	ISX	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr6_+_127898312_127898326	0.024061	ISX	ENST00000329722.7|C6orf58|ENSG00000184530.8|chromosome 6 open reading frame 58
hg19_v2_chr9_+_104296163_104296187	0.0235784	ISX	ENST00000374819.2|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase 	ENST00000479306.1|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr4_-_70080449_70080449	0.023385	ISX	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr6_-_31125850_31126015	0.0225991	ISX	ENST00000507751.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448162.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000502557.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503420.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507892.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507226.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000513222.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503934.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000396263.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000508683.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000428174.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448141.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507829.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000455279.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000376266.5|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1
hg19_v2_chr11_-_62521614_62521660	0.0223897	ISX	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chrY_+_14813160_14813160	0.0215947	ISX	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr14_-_24711865_24711880	0.0215196	ISX	ENST00000399423.4|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000267415.7|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr20_+_24449821_24449843	0.0211254	ISX	ENST00000376862.3|SYNDIG1|ENSG00000101463.5|synapse differentiation inducing 1
hg19_v2_chr8_+_9953214_9953237	0.0207117	ISX	ENST00000382490.5|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr6_-_138833630_138833677	0.0204977	ISX	ENST00000533765.1|NHSL1|ENSG00000135540.7|NHS-like 1
hg19_v2_chrX_-_153363188_153363212	0.0199043	ISX	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr9_+_99212403_99212536	0.019709	ISX	ENST00000375251.3|HABP4|ENSG00000130956.9|hyaluronan binding protein 4 	ENST00000375249.4|HABP4|ENSG00000130956.9|hyaluronan binding protein 4
hg19_v2_chr1_-_150849208_150849244	0.0196511	ISX	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr12_-_120966943_120966985	0.0194826	ISX	ENST00000552443.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547736.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000445328.2|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547943.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000288532.6|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
hg19_v2_chr6_+_34204642_34204664	0.0191859	ISX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr1_-_112281875_112282046	0.0187791	ISX	ENST00000527621.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000534365.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000357260.5|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B
hg19_v2_chr14_-_94789663_94789731	0.0181949	ISX	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr17_-_43045439_43045439	0.0181124	ISX	ENST00000253407.3|C1QL1|ENSG00000131094.3|complement component 1, q subcomponent-like 1
hg19_v2_chr13_+_40229764_40229869	0.0178567	ISX	ENST00000416691.1|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000422759.2|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000455146.3|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6
hg19_v2_chr3_-_151034734_151034745	0.0176983	ISX	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr1_-_23670813_23670816	0.0172464	ISX	ENST00000374612.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chrX_+_43515467_43515562	0.017218	ISX	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr17_-_79650818_79650954	0.0172165	ISX	ENST00000397498.4|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16
hg19_v2_chr4_-_171012844_171012850	0.0170782	ISX	ENST00000502392.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase
hg19_v2_chr14_-_73924954_73925009	0.0167433	ISX	ENST00000555307.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554818.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr8_+_22132847_22132876	0.0165808	ISX	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr6_-_85474219_85474237	0.0162396	ISX	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr4_-_174255536_174255547	0.016097	ISX	ENST00000446922.2|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr10_+_114206956_114207040	0.016054	ISX	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr7_+_148982396_148982408	0.0152041	ISX	ENST00000418158.2|ZNF783|ENSG00000204946.5|zinc finger family member 783
hg19_v2_chr5_+_150226085_150226085	0.0150712	ISX	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr19_+_42041860_42041936	0.01501	ISX	ENST00000483481.2|AC006129.4|ENSG00000270164.1|AC006129.4	ENST00000494375.2|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr10_+_124914285_124914397	0.0149072	ISX	ENST00000407911.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr8_+_22132810_22132844	0.0145006	ISX	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr10_-_104001231_104001274	0.0142963	ISX	ENST00000370002.3|PITX3|ENSG00000107859.5|paired-like homeodomain 3
hg19_v2_chr6_+_148663729_148663847	0.013807	ISX	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr17_+_40440481_40440561	0.0137478	ISX	ENST00000590726.2|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000452307.2|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000444283.1|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000588868.1|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A
hg19_v2_chr1_-_159832438_159832449	0.013739	ISX	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr5_+_140557371_140557371	0.0135718	ISX	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr1_+_162336686_162336732	0.0134518	ISX	ENST00000420220.1|C1orf226|ENSG00000239887.3|chromosome 1 open reading frame 226
hg19_v2_chr14_+_104182105_104182184	0.0132181	ISX	ENST00000311141.2|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr2_+_87135076_87135076	0.0130615	ISX	ENST00000409776.2|RGPD1|ENSG00000187627.10|RANBP2-like and GRIP domain containing 1
hg19_v2_chr1_-_150849047_150849085	0.0127944	ISX	ENST00000354396.2|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator 	ENST00000505755.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr2_+_135809835_135809874	0.0126225	ISX	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr15_-_55700522_55700708	0.0124503	ISX	ENST00000564092.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000310958.6|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr14_-_53258314_53258418	0.012361	ISX	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr8_-_7243080_7243080	0.0122118	ISX	ENST00000400156.4|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr5_+_125935960_125935960	0.0120182	ISX	ENST00000297540.4|PHAX|ENSG00000164902.9|phosphorylated adaptor for RNA export
hg19_v2_chrX_+_19362011_19362122	0.011872	ISX	ENST00000379806.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000545074.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000540249.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000423505.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000417819.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000422285.2|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000355808.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000379805.3|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr1_-_68698222_68698266	0.0118578	ISX	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr22_+_36044411_36044444	0.0118327	ISX	ENST00000409652.4|APOL6|ENSG00000221963.5|apolipoprotein L, 6
hg19_v2_chr1_-_23670817_23670829	0.0116661	ISX	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr8_+_21881636_21881651	0.011541	ISX	ENST00000520125.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000521157.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000397940.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000522813.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2
hg19_v2_chr11_-_108093329_108093375	0.0115225	ISX	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr14_-_104181771_104181841	0.0114692	ISX	ENST00000554913.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000554974.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000553361.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000555055.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000555964.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000556682.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000445556.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000553332.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000352127.7|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3
hg19_v2_chr1_-_150849174_150849200	0.0114503	ISX	ENST00000515192.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr14_-_24711470_24711494	0.0112347	ISX	ENST00000559969.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr9_+_104296243_104296261	0.0110799	ISX	ENST00000466817.1|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr8_+_9413410_9413451	0.0109621	ISX	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr1_+_62902308_62902335	0.0109287	ISX	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr9_+_136501478_136501500	0.0109019	ISX	ENST00000393056.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase) 	ENST00000263611.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase)
hg19_v2_chr16_+_3070313_3070347	0.010714	ISX	ENST00000326577.4|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr11_+_57480046_57480092	0.0105754	ISX	ENST00000378312.4|TMX2|ENSG00000213593.5|thioredoxin-related transmembrane protein 2 	ENST00000278422.4|TMX2|ENSG00000213593.5|thioredoxin-related transmembrane protein 2
hg19_v2_chr2_-_183387430_183387465	0.0103543	ISX	ENST00000410103.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr5_-_159846399_159846412	0.00978545	ISX	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr14_+_57671888_57671888	0.00966344	ISX	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr14_+_39944025_39944139	0.00935604	ISX	ENST00000554328.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000556620.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000557197.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1
hg19_v2_chr12_+_3000037_3000067	0.00931028	ISX	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr8_-_12612962_12613049	0.00913782	ISX	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr22_+_17956618_17956637	0.00898193	ISX	ENST00000262608.8|CECR2|ENSG00000099954.14|cat eye syndrome chromosome region, candidate 2
hg19_v2_chr17_+_59489112_59489112	0.00877334	ISX	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr14_+_32798462_32798539	0.00856146	ISX	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr4_-_66536196_66536216	0.0085386	ISX	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr17_+_42785976_42786039	0.00846516	ISX	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr15_-_42500351_42500523	0.00811241	ISX	ENST00000348544.4|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae) 	ENST00000318006.5|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae)
hg19_v2_chr19_+_50270219_50270391	0.0078628	ISX	ENST00000354293.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit 	ENST00000359032.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit
hg19_v2_chr15_-_55700457_55700520	0.00777987	ISX	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr3_+_37284668_37284771	0.00775417	ISX	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr12_-_50790267_50790405	0.00752466	ISX	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr17_-_18266765_18266786	0.00740503	ISX	ENST00000354098.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr12_+_122688090_122688284	0.00732166	ISX	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr18_-_67624160_67624238	0.00726979	ISX	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr10_-_4285923_4286104	0.00722888	ISX	ENST00000418372.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702 	ENST00000608792.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr9_+_104296122_104296161	0.00712237	ISX	ENST00000389120.3|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr8_+_110551925_110551975	0.00701224	ISX	ENST00000395785.2|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr19_-_6424783_6424805	0.00675373	ISX	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr14_-_20801427_20801457	0.00675315	ISX	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chr9_+_34646624_34646649	0.00658799	ISX	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr10_-_56561022_56561051	0.00658079	ISX	ENST00000373965.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000414778.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395438.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000409834.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395445.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395446.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395442.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395440.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395432.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000361849.3|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395433.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000320301.6|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395430.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000437009.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr6_+_36164487_36164559	0.0062614	ISX	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr12_-_51422017_51422058	0.00623373	ISX	ENST00000394904.3|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr6_-_111927449_111927482	0.00622776	ISX	ENST00000368761.5|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000392556.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000340026.6|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr17_-_77005813_77005856	0.00597602	ISX	ENST00000590370.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000591625.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr19_+_36346734_36346763	0.00586755	ISX	ENST00000586102.3|KIRREL2|ENSG00000126259.15|kin of IRRE like 2 (Drosophila)
hg19_v2_chr6_+_28317685_28317761	0.00585886	ISX	ENST00000252211.2|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000341464.5|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000377255.3|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3
hg19_v2_chr17_+_73452545_73452685	0.00577768	ISX	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr4_-_122686261_122686340	0.00576555	ISX	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr3_-_160823040_160823151	0.00562291	ISX	ENST00000484127.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000492353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000473142.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000468268.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000460353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000320474.4|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392781.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr5_-_95297534_95297563	0.00525361	ISX	ENST00000513343.1|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2 	ENST00000431061.2|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr6_+_31126291_31126399	0.0051371	ISX	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr11_-_63381925_63381946	0.00502323	ISX	ENST00000415826.1|PLA2G16|ENSG00000176485.6|phospholipase A2, group XVI
hg19_v2_chr3_+_111393501_111393538	0.00494213	ISX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr5_+_177631523_177631572	0.00486497	ISX	ENST00000506339.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000355836.5|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000514633.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000515193.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000506259.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000504898.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr4_+_87515454_87515486	0.00478645	ISX	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr5_+_177631497_177631508	0.00473958	ISX	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr18_-_67623906_67624041	0.00467174	ISX	ENST00000583955.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr3_-_149095652_149095652	0.00455119	ISX	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr11_-_77532050_77532066	0.00452744	ISX	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr12_-_53730147_53730177	0.00418527	ISX	ENST00000536324.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr1_+_220267429_220267510	0.00415897	ISX	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr20_-_35580104_35580133	0.00407472	ISX	ENST00000373694.5|SAMHD1|ENSG00000101347.7|SAM domain and HD domain 1
hg19_v2_chr2_+_124782857_124782870	0.00386793	ISX	ENST00000431078.1|CNTNAP5|ENSG00000155052.14|contactin associated protein-like 5
hg19_v2_chr1_+_44115814_44115849	0.00373941	ISX	ENST00000372396.3|KDM4A|ENSG00000066135.8|lysine (K)-specific demethylase 4A
hg19_v2_chr4_-_186733363_186733392	0.0036464	ISX	ENST00000393523.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000393528.3|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000449407.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr11_+_33061543_33061585	0.00336165	ISX	ENST00000432887.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000528898.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000531632.2|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1
hg19_v2_chr20_-_50419055_50419066	0.00323508	ISX	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr12_-_53730126_53730146	0.00295911	ISX	ENST00000537210.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr19_+_42041702_42041734	0.00286754	ISX	ENST00000487420.2|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr11_-_118023490_118023555	0.00265072	ISX	ENST00000324727.4|SCN4B|ENSG00000177098.4|sodium channel, voltage-gated, type IV, beta subunit
hg19_v2_chr19_-_52307357_52307368	0.00255068	ISX	ENST00000594900.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr7_+_70597109_70597155	0.00235658	ISX	ENST00000333538.5|WBSCR17|ENSG00000185274.7|Williams-Beuren syndrome chromosome region 17
hg19_v2_chr3_-_48659193_48659288	0.00234892	ISX	ENST00000330862.3|TMEM89|ENSG00000183396.3|transmembrane protein 89
hg19_v2_chr10_-_105110831_105110885	0.00233472	ISX	ENST00000337211.4|PCGF6|ENSG00000156374.10|polycomb group ring finger 6
hg19_v2_chr22_-_24316648_24316773	0.00230183	ISX	ENST00000403754.3|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000430101.2|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000398344.4|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr6_-_10115007_10115007	0.00226556	ISX	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr16_-_58585513_58585670	0.00222042	ISX	ENST00000245138.4|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000567285.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr10_+_1095416_1095482	0.0021124	ISX	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr12_+_7013897_7014045	0.00202168	ISX	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr1_-_36916011_36916057	0.00186697	ISX	ENST00000356637.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000354267.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000235532.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr16_+_3493611_3493732	0.00163154	ISX	ENST00000407558.4|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572169.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572757.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000608722.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000573593.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000570372.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000424546.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000575733.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000573201.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000574950.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000573580.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr11_+_95523621_95523710	0.00138803	ISX	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr10_-_99205607_99205779	0.0011728	ISX	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr4_-_177190364_177190379	0.00110075	ISX	ENST00000296525.3|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr2_-_183387283_183387304	0.000868831	ISX	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr3_-_105588231_105588396	0.000794411	ISX	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr19_-_36001113_36001196	0.000766282	ISX	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr3_-_160823158_160823177	0.00061614	ISX	ENST00000392779.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392780.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000494173.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr1_-_190446759_190446774	0.000427216	ISX	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr3_+_133292574_133292600	0.000220382	ISX	ENST00000264993.3|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chrX_-_21676442_21676453	0.000126372	ISX	ENST00000379499.2|KLHL34|ENSG00000185915.4|kelch-like family member 34
hg19_v2_chr19_+_42041537_42041547	6.69326e-05	ISX	ENST00000597199.1|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr17_+_78965624_78965694	3.04725e-05	ISX	ENST00000325167.5|CHMP6|ENSG00000176108.5|charged multivesicular body protein 6
