hg19_v2_chr19_-_10697895_10697993	1.87616	HOXA1	ENST00000591240.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000589684.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000591676.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000250244.6|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000590923.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit
hg19_v2_chr20_-_36794938_36794980	1.19281	HOXA1	ENST00000453095.1|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr20_-_36794902_36794917	1.14408	HOXA1	ENST00000373403.3|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr22_+_41968007_41968021	0.729864	HOXA1	ENST00000460790.1|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr16_+_28985542_28985642	0.667159	HOXA1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr10_-_81932771_81932781	0.621194	HOXA1	ENST00000437799.1|ANXA11|ENSG00000122359.13|annexin A11
hg19_v2_chr16_+_28986085_28986122	0.594189	HOXA1	ENST00000565975.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000311008.11|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000323081.8|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000334536.8|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr8_+_37887772_37887859	0.570429	HOXA1	ENST00000338825.4|EIF4EBP1|ENSG00000187840.4|eukaryotic translation initiation factor 4E binding protein 1
hg19_v2_chr5_-_139930713_139930713	0.569424	HOXA1	ENST00000602657.1|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr20_-_23618582_23618663	0.521004	HOXA1	ENST00000398411.1|CST3|ENSG00000101439.4|cystatin C 	ENST00000376925.3|CST3|ENSG00000101439.4|cystatin C
hg19_v2_chr1_-_149812765_149812765	0.497135	HOXA1	ENST00000369158.1|HIST2H3C|ENSG00000203811.1|histone cluster 2, H3c
hg19_v2_chr16_+_21623958_21624021	0.476715	HOXA1	ENST00000568826.1|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr3_-_9834463_9834475	0.476376	HOXA1	ENST00000439043.1|TADA3|ENSG00000171148.9|transcriptional adaptor 3
hg19_v2_chr17_-_8027402_8027432	0.465899	HOXA1	ENST00000541682.2|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000317814.4|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000577735.1|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7
hg19_v2_chr7_-_3214287_3214287	0.460159	HOXA1	ENST00000404626.3|AC091801.1|ENSG00000217455.4|LOC392621; Uncharacterized protein
hg19_v2_chr19_+_16435625_16435682	0.448665	HOXA1	ENST00000248071.5|KLF2|ENSG00000127528.5|Kruppel-like factor 2 	ENST00000592003.1|KLF2|ENSG00000127528.5|Kruppel-like factor 2
hg19_v2_chr16_+_28986134_28986147	0.435938	HOXA1	ENST00000352260.7|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr3_-_129375556_129375570	0.4354	HOXA1	ENST00000510323.1|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr11_+_118754475_118754552	0.434853	HOXA1	ENST00000292174.4|CXCR5|ENSG00000160683.4|chemokine (C-X-C motif) receptor 5
hg19_v2_chr16_+_31213206_31213206	0.434636	HOXA1	ENST00000561916.2|C16orf98|ENSG00000261359.2|chromosome 16 open reading frame 98
hg19_v2_chr1_-_45140074_45140169	0.427626	HOXA1	ENST00000420706.1|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372235.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372242.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372243.3|TMEM53|ENSG00000126106.9|transmembrane protein 53 	ENST00000372244.3|TMEM53|ENSG00000126106.9|transmembrane protein 53
hg19_v2_chr16_+_28303804_28303864	0.403168	HOXA1	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr2_-_239148599_239148765	0.390801	HOXA1	ENST00000409182.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409002.3|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000450098.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409356.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409160.3|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409574.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000272937.5|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6
hg19_v2_chr22_+_25615489_25615544	0.36078	HOXA1	ENST00000398215.2|CRYBB2|ENSG00000244752.2|crystallin, beta B2
hg19_v2_chr17_+_43239191_43239212	0.360673	HOXA1	ENST00000589230.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr12_+_123459127_123459364	0.355975	HOXA1	ENST00000397389.2|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538755.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000536150.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545056.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545612.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538628.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545317.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2
hg19_v2_chr3_+_112929850_112929910	0.34814	HOXA1	ENST00000464546.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr7_+_100136811_100136882	0.342456	HOXA1	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr12_+_78359999_78360056	0.330234	HOXA1	ENST00000550503.1|NAV3|ENSG00000067798.9|neuron navigator 3
hg19_v2_chr15_-_74501360_74501380	0.33016	HOXA1	ENST00000323940.5|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr14_+_24779340_24779371	0.324216	HOXA1	ENST00000533293.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2 	ENST00000543919.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr11_+_114166536_114166560	0.324001	HOXA1	ENST00000299964.3|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr9_-_130679257_130679336	0.32141	HOXA1	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr17_-_8059638_8059723	0.317477	HOXA1	ENST00000584202.1|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000354903.5|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000577253.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr6_+_43395272_43395323	0.317331	HOXA1	ENST00000372530.4|ABCC10|ENSG00000124574.10|ATP-binding cassette, sub-family C (CFTR/MRP), member 10
hg19_v2_chr10_-_79397547_79397575	0.306632	HOXA1	ENST00000481070.1|KCNMA1|ENSG00000156113.16|potassium large conductance calcium-activated channel, subfamily M, alpha member 1
hg19_v2_chr10_-_75012360_75012451	0.304381	HOXA1	ENST00000416782.2|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16 	ENST00000372945.3|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16 	ENST00000372940.3|MRPS16|ENSG00000182180.9|mitochondrial ribosomal protein S16
hg19_v2_chr11_-_126870655_126870673	0.296062	HOXA1	ENST00000525144.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr7_-_559853_559933	0.292343	HOXA1	ENST00000405692.2|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr14_-_23504337_23504369	0.290104	HOXA1	ENST00000361611.6|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr5_+_133861790_133861829	0.288932	HOXA1	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr8_+_22250334_22250354	0.270444	HOXA1	ENST00000520832.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr5_-_180237082_180237148	0.25724	HOXA1	ENST00000506889.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr19_-_5680891_5680951	0.255315	HOXA1	ENST00000309324.4|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr2_+_65215604_65215625	0.253921	HOXA1	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr9_-_128246769_128246780	0.251255	HOXA1	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr7_-_994302_994333	0.250349	HOXA1	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chrX_-_57937067_57937067	0.246791	HOXA1	ENST00000358697.4|ZXDA|ENSG00000198205.5|zinc finger, X-linked, duplicated A
hg19_v2_chr18_+_3411595_3411606	0.246648	HOXA1	ENST00000552383.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr14_-_23822061_23822072	0.246372	HOXA1	ENST00000397260.3|SLC22A17|ENSG00000092096.10|solute carrier family 22, member 17
hg19_v2_chr11_-_126870683_126870706	0.236646	HOXA1	ENST00000525704.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr3_-_49967292_49967327	0.235589	HOXA1	ENST00000455683.2|MON1A|ENSG00000164077.9|MON1 secretory trafficking family member A
hg19_v2_chr3_-_150264272_150264428	0.2352	HOXA1	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr5_-_125930877_125930919	0.233726	HOXA1	ENST00000510111.2|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000509270.1|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1
hg19_v2_chr2_+_74685413_74685456	0.23245	HOXA1	ENST00000233615.2|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr22_-_22307199_22307242	0.225025	HOXA1	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr3_+_9834227_9834260	0.224611	HOXA1	ENST00000287613.7|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa 	ENST00000397261.3|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr15_-_60695071_60695089	0.223888	HOXA1	ENST00000557904.1|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr2_-_190044480_190044605	0.223489	HOXA1	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr15_-_64673665_64673709	0.219623	HOXA1	ENST00000300035.4|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr15_-_64673630_64673648	0.219252	HOXA1	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr16_+_71660079_71660102	0.218643	HOXA1	ENST00000565261.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000268485.3|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000299952.4|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr14_+_91709103_91709103	0.216625	HOXA1	ENST00000553725.1|CTD-2547L24.3|ENSG00000258875.1|HCG1816139; Uncharacterized protein
hg19_v2_chrX_-_25034065_25034088	0.215397	HOXA1	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr16_-_66584015_66584035	0.211785	HOXA1	ENST00000545043.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr2_+_27255806_27255879	0.209279	HOXA1	ENST00000238788.9|TMEM214|ENSG00000119777.14|transmembrane protein 214 	ENST00000404032.3|TMEM214|ENSG00000119777.14|transmembrane protein 214
hg19_v2_chr8_+_104152922_104152992	0.208109	HOXA1	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr9_+_132962843_132962872	0.20669	HOXA1	ENST00000458469.1|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr17_+_43239231_43239297	0.205653	HOXA1	ENST00000591576.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000591070.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000592695.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr11_-_111649074_111649123	0.204176	HOXA1	ENST00000534218.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr6_+_42123141_42123279	0.204076	HOXA1	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr19_+_13875316_13875385	0.203608	HOXA1	ENST00000319545.8|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000593245.1|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000040663.6|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1
hg19_v2_chrX_-_1331527_1331554	0.203023	HOXA1	ENST00000381567.3|CRLF2|ENSG00000205755.6|cytokine receptor-like factor 2 	ENST00000381566.1|CRLF2|ENSG00000205755.6|cytokine receptor-like factor 2 	ENST00000400841.2|CRLF2|ENSG00000205755.6|cytokine receptor-like factor 2
hg19_v2_chr1_+_154975110_154975149	0.201534	HOXA1	ENST00000535420.1|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B 	ENST00000368426.3|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B
hg19_v2_chr17_-_40835076_40835088	0.199599	HOXA1	ENST00000591765.1|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chr2_+_87808725_87808733	0.199029	HOXA1	ENST00000413202.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr14_-_23504432_23504448	0.198259	HOXA1	ENST00000425762.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr19_-_39368887_39368935	0.19613	HOXA1	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr1_-_201096312_201096312	0.195999	HOXA1	ENST00000449188.2|ASCL5|ENSG00000232237.2|achaete-scute family bHLH transcription factor 5
hg19_v2_chr17_-_15501932_15501932	0.195956	HOXA1	ENST00000583965.1|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr2_-_112237835_112237844	0.193622	HOXA1	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr13_+_28519343_28519343	0.19116	HOXA1	ENST00000381026.3|ATP5EP2|ENSG00000180389.6|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
hg19_v2_chr7_+_74379083_74379083	0.186118	HOXA1	ENST00000361825.7|GATSL1|ENSG00000183086.10|GATS protein-like 1
hg19_v2_chr19_+_1026298_1026336	0.18248	HOXA1	ENST00000263097.4|CNN2|ENSG00000064666.10|calponin 2
hg19_v2_chr5_+_150040403_150040444	0.182244	HOXA1	ENST00000517768.1|MYOZ3|ENSG00000164591.9|myozenin 3 	ENST00000297130.4|MYOZ3|ENSG00000164591.9|myozenin 3
hg19_v2_chr1_+_145209092_145209163	0.181257	HOXA1	ENST00000362074.6|NOTCH2NL|ENSG00000213240.7|notch 2 N-terminal like 	ENST00000344859.3|NOTCH2NL|ENSG00000213240.7|notch 2 N-terminal like
hg19_v2_chr19_-_15544099_15544156	0.18043	HOXA1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr19_-_11450249_11450350	0.177142	HOXA1	ENST00000222120.3|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family
hg19_v2_chr19_+_54371114_54371180	0.176672	HOXA1	ENST00000448420.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000439000.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391770.4|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391771.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker
hg19_v2_chr12_-_49449107_49449107	0.176379	HOXA1	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr17_-_39041479_39041501	0.170811	HOXA1	ENST00000167588.3|KRT20|ENSG00000171431.3|keratin 20
hg19_v2_chr19_+_10654854_10654985	0.170247	HOXA1	ENST00000586477.1|ATG4D|ENSG00000130734.5|autophagy related 4D, cysteine peptidase 	ENST00000586863.1|ATG4D|ENSG00000130734.5|autophagy related 4D, cysteine peptidase
hg19_v2_chr18_+_18943554_18943587	0.167235	HOXA1	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr2_+_74685527_74685599	0.166821	HOXA1	ENST00000393972.3|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000409737.1|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000428943.1|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr19_+_5681153_5681193	0.165385	HOXA1	ENST00000579559.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000577222.1|RPL36|ENSG00000130255.8|ribosomal protein L36
hg19_v2_chrX_+_48455866_48455905	0.1636	HOXA1	ENST00000376729.5|WDR13|ENSG00000101940.13|WD repeat domain 13 	ENST00000218056.5|WDR13|ENSG00000101940.13|WD repeat domain 13
hg19_v2_chr17_+_60447579_60447579	0.163217	HOXA1	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr12_+_57998400_57998422	0.162712	HOXA1	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr9_-_116861337_116861349	0.161786	HOXA1	ENST00000374118.3|KIF12|ENSG00000136883.8|kinesin family member 12
hg19_v2_chr18_-_74207146_74207183	0.160678	HOXA1	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr8_-_119124045_119124097	0.149393	HOXA1	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr11_+_61248583_61248600	0.146453	HOXA1	ENST00000432063.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32 	ENST00000338608.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32
hg19_v2_chr20_-_3154162_3154232	0.14416	HOXA1	ENST00000360342.3|LZTS3|ENSG00000088899.10|Homo sapiens leucine zipper, putative tumor suppressor family member 3 (LZTS3), mRNA.
hg19_v2_chr1_-_157014865_157014865	0.143378	HOXA1	ENST00000361409.2|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr12_-_85306594_85306655	0.142673	HOXA1	ENST00000266682.5|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15
hg19_v2_chr22_-_39190116_39190203	0.141286	HOXA1	ENST00000406622.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000216068.4|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4 	ENST00000406199.3|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4
hg19_v2_chr20_+_36012051_36012071	0.139802	HOXA1	ENST00000373567.2|SRC|ENSG00000197122.7|v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
hg19_v2_chr12_-_121342170_121342183	0.137888	HOXA1	ENST00000353487.2|SPPL3|ENSG00000157837.11|signal peptide peptidase like 3
hg19_v2_chr14_+_24779376_24779394	0.135924	HOXA1	ENST00000530080.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr5_-_151138200_151138217	0.135428	HOXA1	ENST00000313115.6|ATOX1|ENSG00000177556.7|antioxidant 1 copper chaperone 	ENST00000522710.1|ATOX1|ENSG00000177556.7|antioxidant 1 copper chaperone
hg19_v2_chr15_-_74501310_74501344	0.134857	HOXA1	ENST00000423167.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6 	ENST00000432245.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr7_+_139528952_139529038	0.134309	HOXA1	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chrX_+_54834791_54834832	0.133921	HOXA1	ENST00000218439.4|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375058.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375060.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
hg19_v2_chr10_-_33623310_33623478	0.133514	HOXA1	ENST00000395995.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374823.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374821.5|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374816.3|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr2_-_75788038_75788089	0.130123	HOXA1	ENST00000393913.3|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans) 	ENST00000410113.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr12_+_48577366_48577374	0.128467	HOXA1	ENST00000316554.3|C12orf68|ENSG00000177875.3|chromosome 12 open reading frame 68
hg19_v2_chr22_+_29834572_29834572	0.126355	HOXA1	ENST00000354373.2|RFPL1|ENSG00000128250.5|ret finger protein-like 1
hg19_v2_chr16_-_88752889_88752921	0.125556	HOXA1	ENST00000332281.5|SNAI3|ENSG00000185669.5|snail family zinc finger 3
hg19_v2_chr2_-_70189397_70189397	0.124599	HOXA1	ENST00000320256.4|ASPRV1|ENSG00000244617.1|aspartic peptidase, retroviral-like 1
hg19_v2_chr17_+_39975544_39975609	0.122602	HOXA1	ENST00000544340.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chrX_-_52258669_52258669	0.121205	HOXA1	ENST00000441417.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr10_+_90562487_90562487	0.120621	HOXA1	ENST00000404743.4|LIPM|ENSG00000173239.9|lipase, family member M
hg19_v2_chr2_+_161993465_161993481	0.120555	HOXA1	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr12_+_125478241_125478260	0.118966	HOXA1	ENST00000341446.8|BRI3BP|ENSG00000184992.10|BRI3 binding protein
hg19_v2_chr3_+_127872265_127872344	0.118561	HOXA1	ENST00000254730.6|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific 	ENST00000483457.1|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific
hg19_v2_chr6_-_44233361_44233500	0.113603	HOXA1	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr1_+_205473720_205473732	0.1132	HOXA1	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chr7_+_139529040_139529073	0.110177	HOXA1	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr10_-_28270795_28270809	0.109763	HOXA1	ENST00000545014.1|ARMC4|ENSG00000169126.11|armadillo repeat containing 4
hg19_v2_chr20_-_30458491_30458550	0.107831	HOXA1	ENST00000339738.5|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr10_-_101380121_101380235	0.105143	HOXA1	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr12_+_58148842_58148929	0.100468	HOXA1	ENST00000266643.5|MARCH9|ENSG00000139266.5|membrane-associated ring finger (C3HC4) 9
hg19_v2_chr17_+_39975455_39975507	0.0973619	HOXA1	ENST00000455106.1|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr4_+_113970772_113970885	0.096461	HOXA1	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr5_+_36152091_36152114	0.0961431	HOXA1	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr3_+_38537960_38537989	0.0960435	HOXA1	ENST00000453767.1|EXOG|ENSG00000157036.8|endo/exonuclease (5'-3'), endonuclease G-like
hg19_v2_chr8_-_66546373_66546428	0.096033	HOXA1	ENST00000518908.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000458464.2|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000519352.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr10_+_98741041_98741041	0.0948486	HOXA1	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chr11_-_2162162_2162246	0.0943545	HOXA1	ENST00000381389.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr15_-_75134992_75135029	0.0939691	HOXA1	ENST00000568667.1|ULK3|ENSG00000140474.8|unc-51 like kinase 3
hg19_v2_chr7_+_30174574_30174655	0.0925026	HOXA1	ENST00000409688.1|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr19_-_45735138_45735138	0.0919897	HOXA1	ENST00000252482.3|EXOC3L2|ENSG00000130201.3|exocyst complex component 3-like 2
hg19_v2_chr15_+_67418047_67418093	0.0918999	HOXA1	ENST00000540846.2|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr16_-_28303360_28303393	0.0910529	HOXA1	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr11_+_66247478_66247503	0.0908179	HOXA1	ENST00000531863.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3 	ENST00000532677.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3
hg19_v2_chr11_+_63706444_63706486	0.090152	HOXA1	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr11_+_122733011_122733052	0.0891896	HOXA1	ENST00000533709.1|CRTAM|ENSG00000109943.4|cytotoxic and regulatory T cell molecule
hg19_v2_chr19_-_33360647_33360691	0.0891395	HOXA1	ENST00000590341.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000587772.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000023064.4|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
hg19_v2_chr1_+_154975258_154975330	0.0890916	HOXA1	ENST00000417934.2|ZBTB7B|ENSG00000160685.9|zinc finger and BTB domain containing 7B
hg19_v2_chr10_+_90562705_90562705	0.0888566	HOXA1	ENST00000539337.1|LIPM|ENSG00000173239.9|lipase, family member M
hg19_v2_chr11_-_61647935_61648020	0.0886782	HOXA1	ENST00000531956.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3
hg19_v2_chr22_-_30866564_30866572	0.087285	HOXA1	ENST00000435069.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000415957.2|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000540910.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr20_-_62168714_62168735	0.0865964	HOXA1	ENST00000542869.1|PTK6|ENSG00000101213.5|protein tyrosine kinase 6
hg19_v2_chr17_-_44896047_44896126	0.082273	HOXA1	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr13_-_23490508_23490568	0.0805716	HOXA1	ENST00000577004.1|LINC00621|ENSG00000262619.1|long intergenic non-protein coding RNA 621
hg19_v2_chr3_+_14444063_14444133	0.0805559	HOXA1	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr7_+_97736197_97736211	0.0787447	HOXA1	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr17_+_4046964_4047029	0.0781347	HOXA1	ENST00000573984.1|CYB5D2|ENSG00000167740.5|cytochrome b5 domain containing 2
hg19_v2_chr17_+_39994032_39994092	0.0769936	HOXA1	ENST00000293303.4|KLHL10|ENSG00000161594.6|kelch-like family member 10 	ENST00000438813.1|KLHL10|ENSG00000161594.6|kelch-like family member 10
hg19_v2_chr3_+_9834179_9834223	0.0767713	HOXA1	ENST00000498623.2|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr13_-_36050819_36050834	0.0764739	HOXA1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chrM_+_4431_4475	0.0761539	HOXA1	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr20_+_44036900_44036984	0.0731246	HOXA1	ENST00000443296.1|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr3_+_49059038_49059067	0.0724125	HOXA1	ENST00000451378.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr7_+_20370746_20370778	0.0723728	HOXA1	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr7_-_99332719_99332820	0.0719189	HOXA1	ENST00000336374.2|CYP3A7|ENSG00000160870.8|cytochrome P450, family 3, subfamily A, polypeptide 7
hg19_v2_chr16_+_57680840_57680889	0.0697248	HOXA1	ENST00000563862.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000564722.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000569158.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr12_-_23737534_23737550	0.0695023	HOXA1	ENST00000396007.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr12_+_10658489_10658489	0.0687355	HOXA1	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr11_-_111649015_111649030	0.0682798	HOXA1	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr9_-_101471479_101471522	0.0675606	HOXA1	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr12_+_57610562_57610608	0.0674363	HOXA1	ENST00000349394.5|NXPH4|ENSG00000182379.9|neurexophilin 4
hg19_v2_chr16_-_55867146_55867249	0.0670606	HOXA1	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr14_+_65453432_65453465	0.065908	HOXA1	ENST00000246166.2|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta
hg19_v2_chr10_+_89264625_89264637	0.0654868	HOXA1	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chrX_+_57618269_57618269	0.0641379	HOXA1	ENST00000374888.1|ZXDB|ENSG00000198455.3|zinc finger, X-linked, duplicated B
hg19_v2_chrX_+_37639302_37639326	0.0637836	HOXA1	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr1_-_207095212_207095278	0.0622603	HOXA1	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr7_-_137028534_137028611	0.061526	HOXA1	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr13_+_30002741_30002776	0.0611427	HOXA1	ENST00000380808.2|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chr16_+_21608525_21608543	0.0608179	HOXA1	ENST00000567404.1|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr1_+_367640_367640	0.0603114	HOXA1	ENST00000426406.1|OR4F29|ENSG00000235249.1|olfactory receptor, family 4, subfamily F, member 29
hg19_v2_chr5_+_125758865_125758876	0.0597014	HOXA1	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr5_+_177433406_177433406	0.0596953	HOXA1	ENST00000504530.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C
hg19_v2_chr16_+_57680811_57680835	0.059658	HOXA1	ENST00000569101.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr13_+_102104980_102105050	0.0590761	HOXA1	ENST00000545560.2|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr20_+_44036620_44036658	0.0586044	HOXA1	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr5_+_133861339_133861432	0.0583293	HOXA1	ENST00000282605.4|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000361895.2|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000402835.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr2_+_166326157_166326216	0.0566698	HOXA1	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr9_+_35829208_35829308	0.0560904	HOXA1	ENST00000439587.2|TMEM8B|ENSG00000137103.12|transmembrane protein 8B 	ENST00000377991.4|TMEM8B|ENSG00000137103.12|transmembrane protein 8B
hg19_v2_chr8_+_1993152_1993168	0.0554065	HOXA1	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr9_+_33795533_33795562	0.0544484	HOXA1	ENST00000379405.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr1_-_151319654_151319704	0.0538489	HOXA1	ENST00000430227.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000412774.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr11_+_3666335_3666361	0.0537644	HOXA1	ENST00000250693.1|ART1|ENSG00000129744.2|ADP-ribosyltransferase 1
hg19_v2_chr22_+_39101728_39101763	0.0534412	HOXA1	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chrX_-_148586804_148586884	0.0515148	HOXA1	ENST00000428056.2|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000340855.6|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000370441.4|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000370443.4|IDS|ENSG00000010404.13|iduronate 2-sulfatase
hg19_v2_chr13_+_36050881_36050887	0.0509412	HOXA1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr4_-_38806404_38806537	0.0505339	HOXA1	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr7_-_137028498_137028520	0.0504748	HOXA1	ENST00000393083.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr9_+_113431059_113431077	0.0489826	HOXA1	ENST00000416899.2|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr9_-_123676827_123676865	0.0489129	HOXA1	ENST00000546084.1|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chr16_+_30080857_30080916	0.04833	HOXA1	ENST00000565355.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr2_+_121011027_121011127	0.0473566	HOXA1	ENST00000449649.1|RALB|ENSG00000144118.9|v-ral simian leukemia viral oncogene homolog B
hg19_v2_chr1_+_10271674_10271674	0.0469507	HOXA1	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr2_-_75788424_75788427	0.0467069	HOXA1	ENST00000410071.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr6_-_47009996_47010035	0.0466209	HOXA1	ENST00000371243.2|GPR110|ENSG00000153292.11|G protein-coupled receptor 110
hg19_v2_chr5_+_36152163_36152174	0.0464393	HOXA1	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr8_-_22550691_22550717	0.0463939	HOXA1	ENST00000519492.1|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr17_-_42277203_42277281	0.0460065	HOXA1	ENST00000587097.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr7_+_139529085_139529115	0.0458674	HOXA1	ENST00000539806.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr17_-_15502111_15502111	0.0458378	HOXA1	ENST00000354433.3|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chrX_+_9431324_9431371	0.0456437	HOXA1	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr1_+_45140360_45140399	0.0442267	HOXA1	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr12_+_21525818_21525862	0.0441518	HOXA1	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr19_+_5681011_5681075	0.0432732	HOXA1	ENST00000581893.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000411793.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000301382.4|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581773.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000423665.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000583928.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000342970.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000422535.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581521.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000339423.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like
hg19_v2_chr16_-_21431078_21431078	0.04327	HOXA1	ENST00000458643.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr18_+_3412005_3412072	0.0432	HOXA1	ENST00000401449.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr3_-_112564797_112564797	0.041993	HOXA1	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr13_+_30002846_30002862	0.0416135	HOXA1	ENST00000542829.1|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chr6_+_73331520_73331578	0.0404925	HOXA1	ENST00000342056.2|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5 	ENST00000355194.4|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5
hg19_v2_chr12_+_69742121_69742171	0.0404425	HOXA1	ENST00000261267.2|LYZ|ENSG00000090382.2|lysozyme 	ENST00000549690.1|LYZ|ENSG00000090382.2|lysozyme 	ENST00000548839.1|LYZ|ENSG00000090382.2|lysozyme
hg19_v2_chr1_-_39347255_39347303	0.0386662	HOXA1	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr4_+_79567362_79567380	0.037901	HOXA1	ENST00000512322.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr1_-_40098672_40098672	0.0378573	HOXA1	ENST00000535435.1|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr8_+_1993173_1993199	0.0364152	HOXA1	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr12_-_10978957_10978957	0.0364114	HOXA1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr1_-_13452656_13452656	0.0360267	HOXA1	ENST00000376132.3|PRAMEF13|ENSG00000204495.3|PRAME family member 13
hg19_v2_chr5_+_175792459_175792513	0.0358125	HOXA1	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr3_-_54962100_54962107	0.0355019	HOXA1	ENST00000273286.5|LRTM1|ENSG00000144771.7|leucine-rich repeats and transmembrane domains 1
hg19_v2_chr22_-_30642728_30642754	0.0352129	HOXA1	ENST00000403987.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr3_+_148709128_148709301	0.034819	HOXA1	ENST00000345003.4|GYG1|ENSG00000163754.13|glycogenin 1 	ENST00000296048.6|GYG1|ENSG00000163754.13|glycogenin 1 	ENST00000483267.1|GYG1|ENSG00000163754.13|glycogenin 1
hg19_v2_chr8_-_27462822_27462856	0.0347775	HOXA1	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr4_-_90229142_90229217	0.0344054	HOXA1	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr10_-_89623194_89623194	0.0338985	HOXA1	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chr3_+_44916098_44916104	0.032232	HOXA1	ENST00000296125.4|TGM4|ENSG00000163810.7|transglutaminase 4
hg19_v2_chr10_-_103599591_103599635	0.0317965	HOXA1	ENST00000348850.5|KCNIP2|ENSG00000120049.14|Kv channel interacting protein 2
hg19_v2_chr17_+_68071389_68071426	0.0314354	HOXA1	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr19_+_19144384_19144473	0.0309068	HOXA1	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chr2_+_181845298_181845378	0.0308818	HOXA1	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr7_-_2354099_2354115	0.0302527	HOXA1	ENST00000222990.3|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chr10_-_106240032_106240047	0.0301326	HOXA1	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr15_-_63674218_63674360	0.0287942	HOXA1	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr16_+_57681338_57681369	0.0284291	HOXA1	ENST00000566187.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr11_+_36317830_36317850	0.0272327	HOXA1	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr4_+_86396265_86396276	0.0266464	HOXA1	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr7_+_45067265_45067276	0.02509	HOXA1	ENST00000474617.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr20_+_60174827_60174849	0.0248879	HOXA1	ENST00000543233.1|CDH4|ENSG00000179242.11|cadherin 4, type 1, R-cadherin (retinal)
hg19_v2_chr11_+_63870660_63870660	0.0245771	HOXA1	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr12_+_64173583_64173664	0.0244759	HOXA1	ENST00000261234.6|TMEM5|ENSG00000118600.7|transmembrane protein 5
hg19_v2_chr13_+_92050928_92050946	0.024412	HOXA1	ENST00000377067.3|GPC5|ENSG00000179399.9|glypican 5
hg19_v2_chr12_-_86650077_86650095	0.0232029	HOXA1	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr1_-_92351666_92351689	0.0231945	HOXA1	ENST00000465892.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III 	ENST00000417833.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr4_+_166300084_166300094	0.0224125	HOXA1	ENST00000402744.4|CPE|ENSG00000109472.9|carboxypeptidase E
hg19_v2_chr7_+_151791095_151791107	0.0221147	HOXA1	ENST00000422997.2|GALNT11|ENSG00000178234.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
hg19_v2_chr2_+_264913_264964	0.0211039	HOXA1	ENST00000439645.2|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble 	ENST00000405233.1|ACP1|ENSG00000143727.11|acid phosphatase 1, soluble
hg19_v2_chr1_+_107682629_107682765	0.0197041	HOXA1	ENST00000370074.4|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370073.2|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370071.2|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000542803.1|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370061.3|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370072.3|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370070.2|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr7_-_38969150_38969169	0.0187019	HOXA1	ENST00000418457.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr8_-_79717750_79717762	0.0186064	HOXA1	ENST00000263851.4|IL7|ENSG00000104432.8|interleukin 7 	ENST00000379113.2|IL7|ENSG00000104432.8|interleukin 7
hg19_v2_chr5_-_20575959_20575997	0.0185025	HOXA1	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr12_-_85306562_85306591	0.0182953	HOXA1	ENST00000551612.1|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15 	ENST00000450363.3|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15 	ENST00000552192.1|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15
hg19_v2_chr1_+_240255166_240255197	0.0182839	HOXA1	ENST00000319653.9|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr3_-_146262488_146262548	0.0182217	HOXA1	ENST00000487389.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr17_-_79358929_79358954	0.0179311	HOXA1	ENST00000570301.1|RP11-1055B8.3|ENSG00000262223.2|RP11-1055B8.3
hg19_v2_chr4_+_79567314_79567348	0.017741	HOXA1	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr17_-_3499125_3499125	0.0176716	HOXA1	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr6_-_154677900_154677944	0.0174898	HOXA1	ENST00000265198.4|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1 	ENST00000520261.1|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1
hg19_v2_chr14_-_81408063_81408088	0.0170585	HOXA1	ENST00000557411.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr1_-_13673511_13673511	0.0166896	HOXA1	ENST00000344998.3|PRAMEF14|ENSG00000204481.6|PRAME family member 14 	ENST00000334600.6|PRAMEF14|ENSG00000204481.6|PRAME family member 14
hg19_v2_chr2_-_197226875_197226946	0.015418	HOXA1	ENST00000409111.1|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr8_-_114449112_114449328	0.015374	HOXA1	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr19_+_39916575_39916622	0.0145688	HOXA1	ENST00000601124.1|CTB-60E11.4|ENSG00000269410.1|CTB-60E11.4
hg19_v2_chr16_+_53920795_53920842	0.0117984	HOXA1	ENST00000431610.2|FTO|ENSG00000140718.14|fat mass and obesity associated 	ENST00000460382.1|FTO|ENSG00000140718.14|fat mass and obesity associated
hg19_v2_chr8_-_27115903_27115927	0.0116487	HOXA1	ENST00000350889.4|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519997.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519614.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000522908.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000265770.7|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr1_+_12123414_12123445	0.0115372	HOXA1	ENST00000263932.2|TNFRSF8|ENSG00000120949.10|tumor necrosis factor receptor superfamily, member 8
hg19_v2_chr1_+_107683436_107683476	0.0113199	HOXA1	ENST00000370068.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr1_-_182369751_182369777	0.0110214	HOXA1	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr8_+_143530791_143530825	0.0107104	HOXA1	ENST00000517894.1|BAI1|ENSG00000181790.6|brain-specific angiogenesis inhibitor 1
hg19_v2_chr3_+_111260856_111260948	0.00965204	HOXA1	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr17_-_1395954_1396106	0.00812233	HOXA1	ENST00000359786.5|MYO1C|ENSG00000197879.10|myosin IC
hg19_v2_chr3_-_179322436_179322447	0.00782963	HOXA1	ENST00000392659.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47 	ENST00000476781.1|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr1_-_45140227_45140243	0.00763859	HOXA1	ENST00000372237.3|TMEM53|ENSG00000126106.9|transmembrane protein 53
hg19_v2_chr15_-_63674034_63674053	0.00758879	HOXA1	ENST00000344366.3|CA12|ENSG00000074410.9|carbonic anhydrase XII 	ENST00000422263.2|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr10_+_7745232_7745295	0.00749482	HOXA1	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chrX_+_128913906_128913960	0.00748893	HOXA1	ENST00000356892.3|SASH3|ENSG00000122122.9|SAM and SH3 domain containing 3
hg19_v2_chr19_-_9325542_9325542	0.00747162	HOXA1	ENST00000308682.2|OR7D4|ENSG00000174667.2|olfactory receptor, family 7, subfamily D, member 4
hg19_v2_chr2_+_71205510_71205637	0.00708088	HOXA1	ENST00000272421.6|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000441349.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000457410.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53
hg19_v2_chrX_+_154610428_154610428	0.00669973	HOXA1	ENST00000354514.4|H2AFB2|ENSG00000198307.4|H2A histone family, member B2
hg19_v2_chr11_+_46193466_46193498	0.00632158	HOXA1	ENST00000533793.1|RP11-702F3.3|ENSG00000255314.1|RP11-702F3.3
hg19_v2_chr1_-_42384343_42384380	0.00589771	HOXA1	ENST00000372584.1|HIVEP3|ENSG00000127124.9|human immunodeficiency virus type I enhancer binding protein 3
hg19_v2_chr17_+_61554413_61554434	0.0057394	HOXA1	ENST00000538928.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000290866.4|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000428043.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme
hg19_v2_chr15_+_71839566_71839581	0.00532669	HOXA1	ENST00000357769.4|THSD4|ENSG00000187720.10|thrombospondin, type I, domain containing 4
hg19_v2_chr1_-_151319710_151319833	0.00472735	HOXA1	ENST00000290524.4|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000437327.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452513.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000368870.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452671.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr6_+_90272488_90272564	0.0043274	HOXA1	ENST00000485637.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6 	ENST00000522705.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr13_+_102104952_102104966	0.00359542	HOXA1	ENST00000376180.3|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr17_-_72619869_72619897	0.00315529	HOXA1	ENST00000392619.1|CD300E|ENSG00000186407.4|CD300e molecule 	ENST00000426295.2|CD300E|ENSG00000186407.4|CD300e molecule
hg19_v2_chr12_+_12878829_12878871	0.00310116	HOXA1	ENST00000326765.6|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr6_+_90272339_90272367	0.00266616	HOXA1	ENST00000522779.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr17_-_26989136_26989218	0.00165242	HOXA1	ENST00000247020.4|SDF2|ENSG00000132581.5|stromal cell-derived factor 2
hg19_v2_chr14_-_103434869_103435038	0.00161362	HOXA1	ENST00000559043.1|CDC42BPB|ENSG00000198752.5|CDC42 binding protein kinase beta (DMPK-like)
hg19_v2_chr1_-_32384693_32384724	0.000793858	HOXA1	ENST00000602683.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2 	ENST00000470404.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr11_-_88796803_88796827	0.000273829	HOXA1	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr8_-_27468945_27468948	0.000130778	HOXA1	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
