hg19_v2_chr4_-_90758227_90758379	0.0792455	GGAAGAC	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr19_+_54412517_54412589	0.0659647	GGAAGAC	ENST00000391767.1|CACNG7|ENSG00000105605.3|calcium channel, voltage-dependent, gamma subunit 7
hg19_v2_chr2_-_73340146_73340185	0.0615614	GGAAGAC	ENST00000258098.6|RAB11FIP5|ENSG00000135631.11|RAB11 family interacting protein 5 (class I)
hg19_v2_chr2_-_220041617_220041708	0.0613427	GGAAGAC	ENST00000451647.1|CNPPD1|ENSG00000115649.11|cyclin Pas1/PHO80 domain containing 1 	ENST00000360507.5|CNPPD1|ENSG00000115649.11|cyclin Pas1/PHO80 domain containing 1
hg19_v2_chr12_-_1703331_1703377	0.0602	GGAAGAC	ENST00000339235.3|FBXL14|ENSG00000171823.6|F-box and leucine-rich repeat protein 14
hg19_v2_chr5_+_137673945_137673961	0.0567632	GGAAGAC	ENST00000513056.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C 	ENST00000511276.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr19_-_47616992_47617011	0.0533242	GGAAGAC	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr2_-_27718052_27718127	0.0526704	GGAAGAC	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr18_-_53255766_53255860	0.0453941	GGAAGAC	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr2_-_97535708_97535843	0.0437606	GGAAGAC	ENST00000305476.5|SEMA4C|ENSG00000168758.6|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
hg19_v2_chr9_-_110251836_110251927	0.0437096	GGAAGAC	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr4_+_6717842_6717937	0.0428283	GGAAGAC	ENST00000320776.3|BLOC1S4|ENSG00000186222.3|biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
hg19_v2_chr13_-_110438914_110438937	0.0421436	GGAAGAC	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr2_+_220042933_220042985	0.0418808	GGAAGAC	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr17_-_42908155_42908204	0.0407509	GGAAGAC	ENST00000426548.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000590758.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000591424.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa
hg19_v2_chr17_-_79885576_79885624	0.0368925	GGAAGAC	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr7_-_143059845_143059866	0.0366335	GGAAGAC	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr20_+_35202909_35203075	0.0349548	GGAAGAC	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr15_+_81293254_81293304	0.0334796	GGAAGAC	ENST00000267984.2|MESDC1|ENSG00000140406.2|mesoderm development candidate 1
hg19_v2_chr2_+_73441350_73441399	0.0321319	GGAAGAC	ENST00000389501.4|SMYD5|ENSG00000135632.7|SMYD family member 5
hg19_v2_chr14_+_23340822_23341004	0.0305701	GGAAGAC	ENST00000359591.4|LRP10|ENSG00000197324.4|low density lipoprotein receptor-related protein 10
hg19_v2_chr1_+_36348790_36348822	0.0305131	GGAAGAC	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr6_-_24721054_24721074	0.0295771	GGAAGAC	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr16_+_67143880_67144050	0.0284396	GGAAGAC	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr19_+_50879705_50879775	0.0280018	GGAAGAC	ENST00000598168.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2 	ENST00000411902.2|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2 	ENST00000253727.5|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2 	ENST00000597790.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2 	ENST00000597130.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2 	ENST00000599105.1|NR1H2|ENSG00000131408.9|nuclear receptor subfamily 1, group H, member 2
hg19_v2_chr2_-_201936302_201936416	0.0264374	GGAAGAC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr20_-_33460621_33460668	0.0260246	GGAAGAC	ENST00000427420.1|GGT7|ENSG00000131067.12|gamma-glutamyltransferase 7 	ENST00000336431.5|GGT7|ENSG00000131067.12|gamma-glutamyltransferase 7
hg19_v2_chr1_+_113010056_113010056	0.0250211	GGAAGAC	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr12_+_122150646_122150719	0.0250032	GGAAGAC	ENST00000449592.2|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr2_-_96781984_96781984	0.0247236	GGAAGAC	ENST00000409345.3|ADRA2B|ENSG00000222040.3|adrenoceptor alpha 2B
hg19_v2_chr3_+_126707437_126707437	0.0216661	GGAAGAC	ENST00000393409.2|PLXNA1|ENSG00000114554.7|plexin A1 	ENST00000251772.4|PLXNA1|ENSG00000114554.7|plexin A1
hg19_v2_chr3_-_18466787_18466861	0.0216452	GGAAGAC	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr1_+_28995231_28995250	0.0213146	GGAAGAC	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr22_-_37823468_37823528	0.0212777	GGAAGAC	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr10_-_99447024_99447080	0.0211001	GGAAGAC	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr2_-_131850951_131851065	0.0208553	GGAAGAC	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr4_+_145567173_145567296	0.0203883	GGAAGAC	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr19_+_10527449_10527619	0.0197589	GGAAGAC	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr17_-_4167142_4167281	0.0193183	GGAAGAC	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr19_-_1848451_1848488	0.0190265	GGAAGAC	ENST00000170168.4|REXO1|ENSG00000079313.7|REX1, RNA exonuclease 1 homolog (S. cerevisiae)
hg19_v2_chr5_+_177019159_177019213	0.0175704	GGAAGAC	ENST00000332598.6|TMED9|ENSG00000184840.7|transmembrane emp24 protein transport domain containing 9
hg19_v2_chr19_+_41222998_41223057	0.0173099	GGAAGAC	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr1_+_159141397_159141549	0.0170454	GGAAGAC	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr19_+_45504688_45504782	0.0165778	GGAAGAC	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr5_+_176513868_176513893	0.0164798	GGAAGAC	ENST00000292408.4|FGFR4|ENSG00000160867.10|fibroblast growth factor receptor 4
hg19_v2_chr1_-_160068465_160068479	0.0160615	GGAAGAC	ENST00000314485.7|IGSF8|ENSG00000162729.9|immunoglobulin superfamily, member 8 	ENST00000368086.1|IGSF8|ENSG00000162729.9|immunoglobulin superfamily, member 8
hg19_v2_chr2_+_75185619_75185803	0.0160445	GGAAGAC	ENST00000483063.1|POLE4|ENSG00000115350.7|polymerase (DNA-directed), epsilon 4, accessory subunit
hg19_v2_chr7_-_10979750_10979883	0.0158121	GGAAGAC	ENST00000339600.5|NDUFA4|ENSG00000189043.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
hg19_v2_chr19_-_46476791_46476819	0.0156624	GGAAGAC	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr2_-_25475120_25475180	0.0135732	GGAAGAC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr22_+_40573921_40573946	0.0135085	GGAAGAC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr4_+_72204755_72204778	0.0134493	GGAAGAC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr2_-_62115725_62115939	0.013294	GGAAGAC	ENST00000538252.1|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta) 	ENST00000544079.1|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta) 	ENST00000394440.3|CCT4|ENSG00000115484.10|chaperonin containing TCP1, subunit 4 (delta)
hg19_v2_chr12_+_53774423_53774658	0.0131996	GGAAGAC	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr19_+_19431490_19431795	0.0127945	GGAAGAC	ENST00000392313.6|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000262815.8|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000609122.1|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor
hg19_v2_chr8_-_28243934_28243993	0.012608	GGAAGAC	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr16_+_16043406_16043434	0.0124736	GGAAGAC	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr1_+_27561007_27561061	0.0123435	GGAAGAC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr10_-_70287231_70287290	0.0119541	GGAAGAC	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr20_+_35234137_35234222	0.0117555	GGAAGAC	ENST00000344795.3|C20orf24|ENSG00000101084.12|chromosome 20 open reading frame 24 	ENST00000373852.5|C20orf24|ENSG00000101084.12|chromosome 20 open reading frame 24
hg19_v2_chr20_+_62526467_62526540	0.0112902	GGAAGAC	ENST00000369911.2|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5 	ENST00000360864.4|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5
hg19_v2_chr10_+_74033672_74033688	0.0112899	GGAAGAC	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr3_-_12705600_12705725	0.0110391	GGAAGAC	ENST00000542177.1|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000442415.2|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000251849.4|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1
hg19_v2_chr8_+_91803695_91803778	0.0109134	GGAAGAC	ENST00000417640.2|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr19_-_36523709_36523796	0.0109027	GGAAGAC	ENST00000592017.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3 	ENST00000360535.4|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chr12_-_56727487_56727533	0.0107608	GGAAGAC	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr14_-_20020272_20020272	0.010714	GGAAGAC	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr14_+_19553365_19553365	0.0106976	GGAAGAC	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr12_+_122064398_122064484	0.0106008	GGAAGAC	ENST00000330079.7|ORAI1|ENSG00000182500.7|ORAI calcium release-activated calcium modulator 1
hg19_v2_chr20_-_3996036_3996153	0.0106	GGAAGAC	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr14_+_85996471_85996497	0.0102436	GGAAGAC	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr3_-_57583130_57583152	0.0101364	GGAAGAC	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr1_-_44497024_44497068	0.00976087	GGAAGAC	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr7_+_75831181_75831236	0.00957102	GGAAGAC	ENST00000388802.4|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3 	ENST00000326382.8|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3
hg19_v2_chr19_+_49622646_49622699	0.00951018	GGAAGAC	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr2_-_227664474_227664508	0.00934729	GGAAGAC	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr11_+_107879459_107879702	0.00919096	GGAAGAC	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr3_-_52931557_52931623	0.00907693	GGAAGAC	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr14_-_70883708_70883819	0.00889837	GGAAGAC	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr7_+_138818490_138818541	0.00881364	GGAAGAC	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr1_+_206557366_206557368	0.008765	GGAAGAC	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr9_-_123555655_123555712	0.00871165	GGAAGAC	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr17_-_39890893_39890898	0.0085522	GGAAGAC	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr8_-_145013711_145013786	0.00848557	GGAAGAC	ENST00000345136.3|PLEC|ENSG00000178209.10|plectin
hg19_v2_chrX_+_150565653_150565694	0.00788503	GGAAGAC	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr20_+_32951041_32951067	0.00784897	GGAAGAC	ENST00000374864.4|ITCH|ENSG00000078747.8|itchy E3 ubiquitin protein ligase
hg19_v2_chr1_+_24742264_24742312	0.00780248	GGAAGAC	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr20_-_48532019_48532045	0.00751183	GGAAGAC	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr12_+_56661033_56661115	0.00746342	GGAAGAC	ENST00000433805.2|COQ10A|ENSG00000135469.9|coenzyme Q10 homolog A (S. cerevisiae)
hg19_v2_chr4_+_129730779_129730826	0.00736789	GGAAGAC	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr1_+_42846443_42846502	0.00684994	GGAAGAC	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr19_-_344786_344826	0.00674151	GGAAGAC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr1_-_115053781_115053853	0.00673886	GGAAGAC	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chr17_-_1613663_1613732	0.00668426	GGAAGAC	ENST00000330676.6|TLCD2|ENSG00000185561.8|TLC domain containing 2
hg19_v2_chr6_+_37137939_37138004	0.00662559	GGAAGAC	ENST00000373509.5|PIM1|ENSG00000137193.9|pim-1 oncogene
hg19_v2_chr5_+_161274685_161274747	0.00658703	GGAAGAC	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr10_+_92980517_92980550	0.00650961	GGAAGAC	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr8_+_1449532_1449532	0.00634392	GGAAGAC	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr7_+_148936732_148936761	0.00620455	GGAAGAC	ENST00000335870.2|ZNF212|ENSG00000170260.4|zinc finger protein 212
hg19_v2_chr19_-_15311713_15311815	0.00619718	GGAAGAC	ENST00000601011.1|NOTCH3|ENSG00000074181.4|notch 3 	ENST00000263388.2|NOTCH3|ENSG00000074181.4|notch 3
hg19_v2_chr17_+_38375574_38375615	0.00617922	GGAAGAC	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr1_-_35325400_35325431	0.0060685	GGAAGAC	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr19_+_39971470_39971498	0.0059626	GGAAGAC	ENST00000607714.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 	ENST00000599794.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 	ENST00000597666.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 	ENST00000601403.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 	ENST00000602028.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
hg19_v2_chr12_+_93965451_93965494	0.00579223	GGAAGAC	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr13_+_41363581_41363633	0.00567279	GGAAGAC	ENST00000338625.4|SLC25A15|ENSG00000102743.10|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
hg19_v2_chr20_-_30310336_30310400	0.00542618	GGAAGAC	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr4_+_71768043_71768095	0.00536934	GGAAGAC	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr13_+_80055284_80055295	0.00529846	GGAAGAC	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr9_+_128509624_128509658	0.00523066	GGAAGAC	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr15_+_72766651_72766680	0.0052203	GGAAGAC	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr6_-_107436473_107436543	0.00521452	GGAAGAC	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr8_+_37654424_37654436	0.00513281	GGAAGAC	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chrX_-_148586804_148586884	0.00509331	GGAAGAC	ENST00000428056.2|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000340855.6|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000370441.4|IDS|ENSG00000010404.13|iduronate 2-sulfatase 	ENST00000370443.4|IDS|ENSG00000010404.13|iduronate 2-sulfatase
hg19_v2_chr11_-_64646086_64646191	0.00507028	GGAAGAC	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr3_-_150264272_150264428	0.00503453	GGAAGAC	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr17_-_48474828_48474914	0.0050213	GGAAGAC	ENST00000576448.1|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59 	ENST00000225972.7|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59
hg19_v2_chr1_+_206643787_206643803	0.00484085	GGAAGAC	ENST00000367120.3|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr16_+_69345243_69345312	0.00476744	GGAAGAC	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr20_+_49348081_49348096	0.00457264	GGAAGAC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr1_+_43855560_43855640	0.00384294	GGAAGAC	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr2_+_204192942_204193038	0.00382155	GGAAGAC	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr8_+_128426535_128426535	0.00382072	GGAAGAC	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr12_-_49449107_49449107	0.00381744	GGAAGAC	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr3_+_11314099_11314122	0.00379953	GGAAGAC	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr17_-_56406117_56406165	0.0037878	GGAAGAC	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr20_-_48099182_48099214	0.00370099	GGAAGAC	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr18_+_55102917_55102985	0.00359238	GGAAGAC	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr1_-_207224307_207224422	0.00357149	GGAAGAC	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr1_+_162351503_162351523	0.00349744	GGAAGAC	ENST00000458626.2|C1orf226|ENSG00000239887.3|chromosome 1 open reading frame 226
hg19_v2_chr7_+_140774032_140774032	0.00348354	GGAAGAC	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr5_-_59189545_59189625	0.00347893	GGAAGAC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_+_28696111_28696130	0.00325991	GGAAGAC	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr16_-_12009735_12009793	0.00303492	GGAAGAC	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr1_+_32573636_32573673	0.00303403	GGAAGAC	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr10_+_80828774_80828792	0.00295256	GGAAGAC	ENST00000334512.5|ZMIZ1|ENSG00000108175.12|zinc finger, MIZ-type containing 1
hg19_v2_chr16_+_28962128_28962335	0.00295041	GGAAGAC	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr21_-_39288743_39288765	0.00281418	GGAAGAC	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr20_+_8112824_8112925	0.00280239	GGAAGAC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr6_+_53659746_53659817	0.00280097	GGAAGAC	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr5_+_149887672_149887698	0.00278261	GGAAGAC	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr12_+_58166431_58166461	0.00271924	GGAAGAC	ENST00000333012.5|METTL21B|ENSG00000123427.11|methyltransferase like 21B
hg19_v2_chr18_+_19749386_19749404	0.0026326	GGAAGAC	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr12_-_46766577_46766650	0.00252704	GGAAGAC	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr10_-_99052382_99052413	0.00246551	GGAAGAC	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr8_+_42249418_42249429	0.00245526	GGAAGAC	ENST00000521158.1|VDAC3|ENSG00000078668.9|voltage-dependent anion channel 3 	ENST00000022615.4|VDAC3|ENSG00000078668.9|voltage-dependent anion channel 3
hg19_v2_chr6_-_134639180_134639220	0.00238813	GGAAGAC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr4_+_15004165_15004298	0.00236897	GGAAGAC	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr6_+_54711533_54711580	0.00236074	GGAAGAC	ENST00000306858.7|FAM83B|ENSG00000168143.8|family with sequence similarity 83, member B
hg19_v2_chr1_+_118148556_118148681	0.00220068	GGAAGAC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr20_+_3451650_3451729	0.00215719	GGAAGAC	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr10_+_81107216_81107237	0.00204111	GGAAGAC	ENST00000394579.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F 	ENST00000225174.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F
hg19_v2_chr14_+_75469606_75469690	0.00201345	GGAAGAC	ENST00000266126.5|EIF2B2|ENSG00000119718.6|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
hg19_v2_chr17_+_5390220_5390247	0.00201282	GGAAGAC	ENST00000381165.3|MIS12|ENSG00000167842.11|MIS12 kinetochore complex component
hg19_v2_chr13_+_27131887_27131899	0.00199041	GGAAGAC	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr17_-_19771216_19771230	0.00188739	GGAAGAC	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr16_+_69599861_69599887	0.001725	GGAAGAC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chrX_+_40944871_40944888	0.00161259	GGAAGAC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chrX_+_49028265_49028289	0.00157789	GGAAGAC	ENST00000376322.3|PLP2|ENSG00000102007.6|proteolipid protein 2 (colonic epithelium-enriched) 	ENST00000376327.5|PLP2|ENSG00000102007.6|proteolipid protein 2 (colonic epithelium-enriched)
hg19_v2_chr6_+_111195973_111195994	0.0015654	GGAAGAC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr5_+_61874562_61874685	0.00151366	GGAAGAC	ENST00000334994.5|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70 	ENST00000409534.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr10_-_52645416_52645444	0.00149132	GGAAGAC	ENST00000374001.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373997.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373995.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000282641.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000395495.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000414883.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor
hg19_v2_chr11_-_18656028_18656040	0.00144241	GGAAGAC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr11_-_75062730_75062775	0.00142363	GGAAGAC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr7_-_35734730_35734777	0.00132356	GGAAGAC	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr2_+_7057523_7057613	0.0013194	GGAAGAC	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr17_-_42143963_42144103	0.00123498	GGAAGAC	ENST00000585388.1|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae) 	ENST00000293406.3|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae)
hg19_v2_chr5_+_17217669_17217718	0.00119613	GGAAGAC	ENST00000322611.3|BASP1|ENSG00000176788.7|brain abundant, membrane attached signal protein 1
hg19_v2_chr3_-_114790179_114790222	0.001189	GGAAGAC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr20_+_30946106_30946168	0.00117962	GGAAGAC	ENST00000375687.4|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila) 	ENST00000542461.1|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila)
hg19_v2_chr4_-_142053952_142053996	0.00117047	GGAAGAC	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr20_-_50159198_50159299	0.00116975	GGAAGAC	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr3_-_15901278_15901354	0.00112096	GGAAGAC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr2_-_213403565_213403584	0.00108994	GGAAGAC	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr3_-_88108192_88108203	0.00107392	GGAAGAC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr2_-_197457335_197457421	0.00104937	GGAAGAC	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr4_-_114682936_114683083	0.00104791	GGAAGAC	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr12_+_65563329_65563373	0.00103393	GGAAGAC	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr16_-_18812746_18813000	0.00103067	GGAAGAC	ENST00000546206.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000567078.2|RP11-1035H13.3|ENSG00000260342.2|Uncharacterized protein  	ENST00000562819.1|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000562234.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000304414.7|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1
hg19_v2_chr2_+_201676256_201676323	0.00097312	GGAAGAC	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr8_+_23386305_23386318	0.00096512	GGAAGAC	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr9_+_118916082_118916108	0.000934643	GGAAGAC	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr5_+_71403061_71403169	0.00092728	GGAAGAC	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr4_+_184826418_184826522	0.000926388	GGAAGAC	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr8_-_114389353_114389387	0.000920118	GGAAGAC	ENST00000343508.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr16_-_4166186_4166186	0.00091173	GGAAGAC	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr10_+_82168240_82168322	0.00086373	GGAAGAC	ENST00000372187.5|FAM213A|ENSG00000122378.9|family with sequence similarity 213, member A 	ENST00000372185.1|FAM213A|ENSG00000122378.9|family with sequence similarity 213, member A
hg19_v2_chr19_+_3359561_3359681	0.000844419	GGAAGAC	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr9_-_14314066_14314075	0.000835484	GGAAGAC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr14_-_45431091_45431175	0.000809484	GGAAGAC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr17_+_29718642_29718656	0.000809164	GGAAGAC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chrX_+_70752917_70752933	0.000740514	GGAAGAC	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr1_+_113161778_113161820	0.000732973	GGAAGAC	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr16_+_50582222_50582241	0.00071436	GGAAGAC	ENST00000268459.3|NKD1|ENSG00000140807.4|naked cuticle homolog 1 (Drosophila)
hg19_v2_chr17_-_2206801_2206845	0.000693885	GGAAGAC	ENST00000544865.1|SMG6|ENSG00000070366.9|SMG6 nonsense mediated mRNA decay factor
hg19_v2_chrX_+_122993827_122993910	0.000615866	GGAAGAC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr1_-_33430286_33430421	0.000552405	GGAAGAC	ENST00000373456.7|RNF19B|ENSG00000116514.12|ring finger protein 19B 	ENST00000356990.5|RNF19B|ENSG00000116514.12|ring finger protein 19B 	ENST00000235150.4|RNF19B|ENSG00000116514.12|ring finger protein 19B
hg19_v2_chr8_-_125384927_125384952	0.000539416	GGAAGAC	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr9_-_128469456_128469513	0.000527428	GGAAGAC	ENST00000427078.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000373496.3|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000433483.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000350766.3|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000373503.3|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000373511.2|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000394060.3|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000265960.3|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1 	ENST00000394063.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr17_+_25799008_25799036	0.000399519	GGAAGAC	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr16_+_85646763_85646822	0.000358986	GGAAGAC	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr3_-_178790057_178790072	0.000316034	GGAAGAC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr17_-_1465924_1466129	0.000164077	GGAAGAC	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr1_-_153895377_153895465	0.000113565	GGAAGAC	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
