hg19_v2_chr14_+_105992906_105992946	0.0510899	GAGAUGA	ENST00000392519.2|TMEM121|ENSG00000184986.6|transmembrane protein 121
hg19_v2_chr2_+_28615669_28615733	0.0500558	GAGAUGA	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr17_+_19281034_19281091	0.0478268	GAGAUGA	ENST00000308406.5|MAPK7|ENSG00000166484.15|mitogen-activated protein kinase 7 	ENST00000299612.7|MAPK7|ENSG00000166484.15|mitogen-activated protein kinase 7
hg19_v2_chr7_+_2671568_2671606	0.0377909	GAGAUGA	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr1_+_87794150_87794172	0.0372736	GAGAUGA	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr20_+_2673383_2673525	0.0338641	GAGAUGA	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chrX_+_73641286_73641400	0.0263562	GAGAUGA	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr19_+_18942720_18942748	0.0261162	GAGAUGA	ENST00000262803.5|UPF1|ENSG00000005007.8|UPF1 regulator of nonsense transcripts homolog (yeast)
hg19_v2_chr4_-_53525406_53525502	0.0257463	GAGAUGA	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr11_+_76494253_76494317	0.0240553	GAGAUGA	ENST00000333090.4|TSKU|ENSG00000182704.6|tsukushi, small leucine rich proteoglycan
hg19_v2_chr1_-_179198702_179198741	0.0222693	GAGAUGA	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr7_+_20370746_20370778	0.0218462	GAGAUGA	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr12_-_54673871_54673925	0.0214434	GAGAUGA	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr4_+_184826418_184826522	0.0213721	GAGAUGA	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr17_+_55333876_55333939	0.0177248	GAGAUGA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chrX_+_69664706_69664819	0.0174293	GAGAUGA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr9_+_130830451_130830572	0.0174186	GAGAUGA	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr10_-_105615164_105615323	0.0171402	GAGAUGA	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr15_+_85923856_85923987	0.0166564	GAGAUGA	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr17_+_60704762_60704762	0.0164683	GAGAUGA	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr16_+_67063036_67063088	0.0157954	GAGAUGA	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr11_+_118477144_118477156	0.0154189	GAGAUGA	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr12_+_69864129_69864222	0.0153579	GAGAUGA	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr11_-_73309228_73309257	0.0150718	GAGAUGA	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr2_-_25475120_25475180	0.0147734	GAGAUGA	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr19_-_47735918_47736023	0.0146375	GAGAUGA	ENST00000449228.1|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000300880.7|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000341983.4|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr2_-_190044480_190044605	0.0145513	GAGAUGA	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr1_+_110577229_110577258	0.0145086	GAGAUGA	ENST00000369795.3|STRIP1|ENSG00000143093.10|striatin interacting protein 1 	ENST00000369794.2|STRIP1|ENSG00000143093.10|striatin interacting protein 1
hg19_v2_chr17_+_47865917_47866068	0.0144453	GAGAUGA	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr19_-_46234119_46234189	0.0138784	GAGAUGA	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chrX_-_106959631_106959775	0.0138502	GAGAUGA	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr5_-_142065612_142065638	0.0128475	GAGAUGA	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chr5_+_154092396_154092462	0.0128282	GAGAUGA	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr14_+_77228532_77228672	0.0127847	GAGAUGA	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chr19_-_40324255_40324296	0.0127264	GAGAUGA	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr5_-_158526756_158526797	0.0126537	GAGAUGA	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr5_-_100238956_100238994	0.012202	GAGAUGA	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr14_-_96830207_96830207	0.0120545	GAGAUGA	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr1_+_27153173_27153230	0.0118958	GAGAUGA	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr12_+_48577366_48577374	0.0115793	GAGAUGA	ENST00000316554.3|C12orf68|ENSG00000177875.3|chromosome 12 open reading frame 68
hg19_v2_chr17_+_37026106_37026123	0.0113387	GAGAUGA	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr9_+_116638562_116638606	0.011107	GAGAUGA	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr12_-_53625958_53626036	0.0109771	GAGAUGA	ENST00000327550.3|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000546717.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000425354.2|RARG|ENSG00000172819.12|retinoic acid receptor, gamma 	ENST00000394426.1|RARG|ENSG00000172819.12|retinoic acid receptor, gamma
hg19_v2_chr20_+_56964169_56964182	0.0109514	GAGAUGA	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr15_+_31619013_31619095	0.0109054	GAGAUGA	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr12_-_49449107_49449107	0.0106547	GAGAUGA	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr7_+_5632436_5632454	0.0104387	GAGAUGA	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr17_-_61920280_61920425	0.0101296	GAGAUGA	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg19_v2_chr3_+_9834758_9834801	0.00987276	GAGAUGA	ENST00000485273.1|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa 	ENST00000397256.1|ARPC4-TTLL3|ENSG00000250151.5|ARPC4-TTLL3 readthrough 	ENST00000433034.1|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chr4_+_87856129_87856186	0.00967621	GAGAUGA	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr5_+_139944024_139944054	0.00955939	GAGAUGA	ENST00000323146.3|SLC35A4|ENSG00000176087.10|solute carrier family 35, member A4
hg19_v2_chr14_+_21538429_21538469	0.00954634	GAGAUGA	ENST00000298694.4|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40 	ENST00000555038.1|ARHGEF40|ENSG00000165801.5|Rho guanine nucleotide exchange factor (GEF) 40
hg19_v2_chr2_+_233562015_233562062	0.00949563	GAGAUGA	ENST00000427233.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373566.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000373563.4|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000428883.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000456491.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409480.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000421433.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000425040.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000430720.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409547.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000423659.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409196.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000409451.3|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000429187.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2 	ENST00000440945.1|GIGYF2|ENSG00000204120.10|GRB10 interacting GYF protein 2
hg19_v2_chr3_-_24536253_24536328	0.00921978	GAGAUGA	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr11_+_57520715_57520776	0.00903669	GAGAUGA	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr2_+_26568965_26569025	0.00888044	GAGAUGA	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr19_-_19739007_19739051	0.0087907	GAGAUGA	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr12_+_8234807_8234855	0.00875111	GAGAUGA	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr15_-_68724490_68724516	0.00847655	GAGAUGA	ENST00000315757.7|ITGA11|ENSG00000137809.12|integrin, alpha 11 	ENST00000423218.2|ITGA11|ENSG00000137809.12|integrin, alpha 11
hg19_v2_chr12_+_60083118_60083157	0.00846178	GAGAUGA	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr7_-_47621736_47621747	0.00825351	GAGAUGA	ENST00000311160.9|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr1_+_165796753_165796776	0.00819205	GAGAUGA	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr19_-_38806560_38806607	0.00816482	GAGAUGA	ENST00000591755.1|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000337679.8|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae) 	ENST00000339413.6|YIF1B|ENSG00000167645.12|Yip1 interacting factor homolog B (S. cerevisiae)
hg19_v2_chr17_-_47841485_47841529	0.00809438	GAGAUGA	ENST00000506156.1|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A 	ENST00000240364.2|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A
hg19_v2_chr12_-_42538657_42538720	0.00796187	GAGAUGA	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr12_+_50898881_50898907	0.00777267	GAGAUGA	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr6_-_24721054_24721074	0.00739311	GAGAUGA	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr6_+_114178512_114178586	0.0071561	GAGAUGA	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr3_+_97483366_97483422	0.00700961	GAGAUGA	ENST00000463745.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6 	ENST00000462412.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6
hg19_v2_chrX_+_9983602_9983602	0.00678543	GAGAUGA	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr1_-_231560790_231560790	0.00674088	GAGAUGA	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr9_-_123476719_123476810	0.00666932	GAGAUGA	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr19_-_10121144_10121155	0.00619876	GAGAUGA	ENST00000264828.3|COL5A3|ENSG00000080573.6|collagen, type V, alpha 3
hg19_v2_chr3_+_9975497_9975553	0.00614404	GAGAUGA	ENST00000397170.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000383811.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000452070.1|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000326434.5|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1
hg19_v2_chr16_-_79634595_79634620	0.00600782	GAGAUGA	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr17_-_18908040_18908117	0.00594056	GAGAUGA	ENST00000388995.6|FAM83G|ENSG00000188522.10|family with sequence similarity 83, member G
hg19_v2_chr1_+_36348790_36348822	0.00580889	GAGAUGA	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr17_+_61086917_61086921	0.00550136	GAGAUGA	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr5_+_32711419_32711540	0.0053442	GAGAUGA	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr3_-_114790179_114790222	0.00523799	GAGAUGA	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr19_+_3359561_3359681	0.00497282	GAGAUGA	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr8_-_18871159_18871201	0.00493771	GAGAUGA	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr7_-_128695147_128695203	0.00484028	GAGAUGA	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr2_-_96931679_96931756	0.00479318	GAGAUGA	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr3_+_72937182_72937270	0.00461339	GAGAUGA	ENST00000389617.4|GXYLT2|ENSG00000172986.8|glucoside xylosyltransferase 2
hg19_v2_chr1_-_41131326_41131400	0.00449751	GAGAUGA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr20_-_62284766_62284785	0.00448376	GAGAUGA	ENST00000370053.1|STMN3|ENSG00000197457.5|stathmin-like 3
hg19_v2_chr6_+_107811162_107811196	0.00443604	GAGAUGA	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr2_+_220042933_220042985	0.00439936	GAGAUGA	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr2_+_120517174_120517207	0.00426898	GAGAUGA	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr6_+_160390102_160390147	0.00424934	GAGAUGA	ENST00000356956.1|IGF2R|ENSG00000197081.8|insulin-like growth factor 2 receptor
hg19_v2_chr5_+_169064245_169064303	0.00411873	GAGAUGA	ENST00000256935.8|DOCK2|ENSG00000134516.11|dedicator of cytokinesis 2
hg19_v2_chr17_+_38219063_38219154	0.0040774	GAGAUGA	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr6_-_52441713_52441784	0.00393022	GAGAUGA	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr1_+_39456895_39456986	0.00390815	GAGAUGA	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr8_-_116681221_116681236	0.00389551	GAGAUGA	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr15_-_41408409_41408552	0.00386371	GAGAUGA	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr2_-_217560248_217560278	0.00371341	GAGAUGA	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr4_+_15004165_15004298	0.00371294	GAGAUGA	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr11_-_118047376_118047388	0.00359508	GAGAUGA	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr1_+_62208091_62208182	0.00359006	GAGAUGA	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr20_-_48099182_48099214	0.00350455	GAGAUGA	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr15_+_65134088_65134147	0.00342757	GAGAUGA	ENST00000323544.4|PLEKHO2|ENSG00000241839.5|pleckstrin homology domain containing, family O member 2 	ENST00000437723.1|AC069368.3|ENSG00000249240.2|Uncharacterized protein
hg19_v2_chr2_-_85839146_85839198	0.00341113	GAGAUGA	ENST00000306336.5|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68 	ENST00000409734.3|C2orf68|ENSG00000168887.6|chromosome 2 open reading frame 68
hg19_v2_chr15_-_100258029_100258029	0.00338977	GAGAUGA	ENST00000378904.2|DKFZP779J2370|ENSG00000214397.2|DKFZP779J2370
hg19_v2_chr12_-_65146636_65146651	0.00328293	GAGAUGA	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr3_-_52188397_52188450	0.00315259	GAGAUGA	ENST00000474012.1|POC1A|ENSG00000164087.3|POC1 centriolar protein A 	ENST00000296484.2|POC1A|ENSG00000164087.3|POC1 centriolar protein A
hg19_v2_chr9_+_90112741_90112761	0.0028759	GAGAUGA	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chrX_-_63425561_63425624	0.0028521	GAGAUGA	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr12_+_103981044_103981061	0.00272428	GAGAUGA	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chr15_+_67358163_67358192	0.00271302	GAGAUGA	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr14_+_37667118_37667192	0.00268641	GAGAUGA	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chrX_-_48858630_48858660	0.00266553	GAGAUGA	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr17_+_56160768_56160786	0.00246885	GAGAUGA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr15_+_44719394_44719579	0.0023848	GAGAUGA	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chrX_+_154997474_154997474	0.00227756	GAGAUGA	ENST00000302805.2|SPRY3|ENSG00000168939.6|sprouty homolog 3 (Drosophila)
hg19_v2_chr8_-_82024290_82024310	0.00226436	GAGAUGA	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr15_+_77287426_77287487	0.00224021	GAGAUGA	ENST00000558012.1|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000267939.5|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1 	ENST00000379595.3|PSTPIP1|ENSG00000140368.8|proline-serine-threonine phosphatase interacting protein 1
hg19_v2_chr16_-_23521710_23521826	0.00207887	GAGAUGA	ENST00000562117.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000567468.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000562944.1|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2 	ENST00000309859.4|GGA2|ENSG00000103365.11|golgi-associated, gamma adaptin ear containing, ARF binding protein 2
hg19_v2_chr2_-_9563319_9563379	0.00207105	GAGAUGA	ENST00000497105.1|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000360635.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1 	ENST00000359712.3|ITGB1BP1|ENSG00000119185.8|integrin beta 1 binding protein 1
hg19_v2_chr16_+_70148230_70148275	0.00206318	GAGAUGA	ENST00000398122.3|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit 	ENST00000568530.1|PDPR|ENSG00000090857.9|pyruvate dehydrogenase phosphatase regulatory subunit
hg19_v2_chr1_+_178062855_178062903	0.00202299	GAGAUGA	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr12_+_12764773_12764852	0.00200456	GAGAUGA	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr1_+_110527308_110527349	0.00192899	GAGAUGA	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr12_-_32908809_32908840	0.00189945	GAGAUGA	ENST00000324868.8|YARS2|ENSG00000139131.8|tyrosyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr20_+_30865429_30865480	0.00172925	GAGAUGA	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr3_+_49236910_49236944	0.00169408	GAGAUGA	ENST00000452691.2|CCDC36|ENSG00000173421.12|coiled-coil domain containing 36 	ENST00000366429.2|CCDC36|ENSG00000173421.12|coiled-coil domain containing 36
hg19_v2_chr17_-_48278983_48278999	0.00168029	GAGAUGA	ENST00000225964.5|COL1A1|ENSG00000108821.9|collagen, type I, alpha 1
hg19_v2_chr12_+_56473628_56473680	0.00162843	GAGAUGA	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr12_+_125811162_125811162	0.00162434	GAGAUGA	ENST00000299308.3|TMEM132B|ENSG00000139364.6|transmembrane protein 132B
hg19_v2_chr5_+_141303373_141303421	0.00160569	GAGAUGA	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr4_+_55095264_55095390	0.00156265	GAGAUGA	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr6_+_155054459_155054561	0.00155537	GAGAUGA	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr18_+_9136758_9136852	0.00155125	GAGAUGA	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr1_-_155532484_155532605	0.00154966	GAGAUGA	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr2_-_73053126_73053184	0.00151366	GAGAUGA	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr11_-_67236691_67236748	0.001503	GAGAUGA	ENST00000544903.1|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000308022.2|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000393877.3|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000452789.2|TMEM134|ENSG00000172663.4|transmembrane protein 134
hg19_v2_chr11_-_118661828_118661886	0.00139918	GAGAUGA	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr10_+_11206925_11206993	0.00133029	GAGAUGA	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr6_+_32936353_32936437	0.00128249	GAGAUGA	ENST00000374825.4|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr2_+_97481974_97482015	0.00127627	GAGAUGA	ENST00000377060.3|CNNM3|ENSG00000168763.11|cyclin M3 	ENST00000305510.3|CNNM3|ENSG00000168763.11|cyclin M3
hg19_v2_chr11_+_94501497_94501577	0.00111116	GAGAUGA	ENST00000317829.8|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000317837.9|AMOTL1|ENSG00000166025.13|angiomotin like 1 	ENST00000433060.2|AMOTL1|ENSG00000166025.13|angiomotin like 1
hg19_v2_chr6_+_76458909_76458934	0.00107819	GAGAUGA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr22_-_22221900_22221970	0.00103476	GAGAUGA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr19_-_51141196_51141302	0.000981152	GAGAUGA	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr14_-_31495569_31495636	0.000964194	GAGAUGA	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr5_-_159846399_159846412	0.000799299	GAGAUGA	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr6_-_91296602_91296721	0.000744344	GAGAUGA	ENST00000369325.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7 	ENST00000369327.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7
hg19_v2_chrX_-_110655391_110655449	0.00069324	GAGAUGA	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr3_+_183873098_183873230	0.000638791	GAGAUGA	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr6_-_33282163_33282211	0.000588627	GAGAUGA	ENST00000434618.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000456592.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr10_-_89623194_89623194	0.000559809	GAGAUGA	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chr3_+_185303962_185304021	0.00048832	GAGAUGA	ENST00000296257.5|SENP2|ENSG00000163904.8|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v2_chrX_+_152599604_152599626	0.00033928	GAGAUGA	ENST00000370251.3|ZNF275|ENSG00000063587.12|zinc finger protein 275 	ENST00000421401.3|ZNF275|ENSG00000063587.12|zinc finger protein 275
hg19_v2_chr9_-_113342160_113342214	0.000288565	GAGAUGA	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr9_+_130374537_130374568	0.000142686	GAGAUGA	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr3_+_49591881_49591940	0.000116493	GAGAUGA	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr2_-_176948641_176948641	7.95001e-05	GAGAUGA	ENST00000308618.4|EVX2|ENSG00000174279.4|even-skipped homeobox 2
hg19_v2_chr20_-_50159198_50159299	7.72946e-05	GAGAUGA	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
