hg19_v2_chr16_+_3068393_3068446	0.146171	FOXJ2	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr2_-_206950996_206951032	0.117666	FOXJ2	ENST00000414320.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr6_-_27858570_27858611	0.112138	FOXJ2	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr20_+_55926625_55926634	0.109824	FOXJ2	ENST00000452119.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr19_+_55996316_55996386	0.102698	FOXJ2	ENST00000205194.4|NAT14|ENSG00000090971.4|N-acetyltransferase 14 (GCN5-related, putative)
hg19_v2_chr11_-_57089774_57089826	0.100698	FOXJ2	ENST00000527207.1|TNKS1BP1|ENSG00000149115.9|tankyrase 1 binding protein 1, 182kDa
hg19_v2_chr14_-_54418598_54418865	0.0957448	FOXJ2	ENST00000609748.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4 	ENST00000558961.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr17_+_4692230_4692265	0.0951802	FOXJ2	ENST00000331264.7|GLTPD2|ENSG00000182327.7|glycolipid transfer protein domain containing 2
hg19_v2_chr9_+_33617760_33617760	0.0871883	FOXJ2	ENST00000379435.3|TRBV20OR9-2|ENSG00000205274.3|T cell receptor beta variable 20/OR9-2 (non-functional)
hg19_v2_chr22_-_39268308_39268319	0.0853336	FOXJ2	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr1_+_43855545_43855557	0.078921	FOXJ2	ENST00000372450.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse) 	ENST00000310739.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr6_+_30882108_30882159	0.0776027	FOXJ2	ENST00000541562.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000421263.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr3_+_127317945_127317945	0.0772029	FOXJ2	ENST00000472731.1|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr19_-_56047661_56047668	0.0723396	FOXJ2	ENST00000344158.3|SBK2|ENSG00000187550.4|SH3 domain binding kinase family, member 2
hg19_v2_chr17_+_17685422_17685446	0.072222	FOXJ2	ENST00000395774.1|RAI1|ENSG00000108557.13|retinoic acid induced 1
hg19_v2_chr6_-_10747802_10747896	0.0707167	FOXJ2	ENST00000606522.1|RP11-421M1.8|ENSG00000272097.1|RP11-421M1.8	ENST00000606652.1|RP11-421M1.8|ENSG00000272097.1|RP11-421M1.8
hg19_v2_chr19_+_47538560_47538606	0.0703993	FOXJ2	ENST00000439365.2|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1 	ENST00000594670.1|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1
hg19_v2_chr6_+_30881982_30882080	0.0684377	FOXJ2	ENST00000321897.5|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000416670.2|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000542001.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000428017.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr3_-_156878482_156878506	0.0667698	FOXJ2	ENST00000295925.4|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr3_+_127317705_127317705	0.0643113	FOXJ2	ENST00000480910.1|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr11_+_120081475_120081488	0.0639472	FOXJ2	ENST00000328965.4|OAF|ENSG00000184232.4|OAF homolog (Drosophila)
hg19_v2_chr19_+_56989485_56989565	0.0633523	FOXJ2	ENST00000585445.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000586091.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000594783.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000592146.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000588158.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000299997.4|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000591797.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr19_+_48248779_48248808	0.0632737	FOXJ2	ENST00000246802.5|GLTSCR2|ENSG00000105373.14|glioma tumor suppressor candidate region gene 2
hg19_v2_chr17_-_56494882_56494902	0.0570582	FOXJ2	ENST00000584437.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr3_-_148939598_148939622	0.0569868	FOXJ2	ENST00000455472.3|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr6_-_52628271_52628367	0.056689	FOXJ2	ENST00000493422.1|GSTA2|ENSG00000244067.1|glutathione S-transferase alpha 2
hg19_v2_chr12_+_57623477_57623531	0.0565631	FOXJ2	ENST00000557487.1|SHMT2|ENSG00000182199.6|serine hydroxymethyltransferase 2 (mitochondrial) 	ENST00000555634.1|SHMT2|ENSG00000182199.6|serine hydroxymethyltransferase 2 (mitochondrial) 	ENST00000556689.1|SHMT2|ENSG00000182199.6|serine hydroxymethyltransferase 2 (mitochondrial)
hg19_v2_chr16_-_4817129_4817219	0.055124	FOXJ2	ENST00000545009.1|ZNF500|ENSG00000103199.9|zinc finger protein 500 	ENST00000219478.6|ZNF500|ENSG00000103199.9|zinc finger protein 500
hg19_v2_chr16_+_2106134_2106163	0.0544295	FOXJ2	ENST00000467949.1|TSC2|ENSG00000103197.12|tuberous sclerosis 2
hg19_v2_chr1_+_43855560_43855640	0.0544169	FOXJ2	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr1_+_81106951_81107001	0.0541134	FOXJ2	ENST00000443565.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr11_+_64085560_64085736	0.0540334	FOXJ2	ENST00000265462.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5 	ENST00000352435.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5 	ENST00000347941.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5
hg19_v2_chr14_+_38264418_38264513	0.0529748	FOXJ2	ENST00000267368.7|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6 	ENST00000382320.3|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr17_-_26733179_26733237	0.0528002	FOXJ2	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr17_-_56494908_56494949	0.0513956	FOXJ2	ENST00000577716.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr3_+_52017454_52017572	0.0505217	FOXJ2	ENST00000476854.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000476351.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000494103.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000404366.2|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000469863.1|ACY1|ENSG00000243989.3|aminoacylase 1
hg19_v2_chr7_-_102283238_102283238	0.0502939	FOXJ2	ENST00000340457.8|UPK3BL|ENSG00000267368.1|uroplakin 3B-like
hg19_v2_chrX_-_107682702_107682722	0.0483024	FOXJ2	ENST00000372216.4|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr12_+_123949053_123949053	0.0480017	FOXJ2	ENST00000350887.5|SNRNP35|ENSG00000184209.14|small nuclear ribonucleoprotein 35kDa (U11/U12)
hg19_v2_chr15_+_64428529_64428613	0.047663	FOXJ2	ENST00000560861.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr9_-_130679257_130679336	0.047549	FOXJ2	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr20_+_55926566_55926578	0.0449221	FOXJ2	ENST00000411894.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1 	ENST00000429339.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr22_+_24407642_24407770	0.0449011	FOXJ2	ENST00000454754.1|CABIN1|ENSG00000099991.12|calcineurin binding protein 1 	ENST00000263119.5|CABIN1|ENSG00000099991.12|calcineurin binding protein 1
hg19_v2_chr11_-_57089671_57089766	0.0443232	FOXJ2	ENST00000532437.1|TNKS1BP1|ENSG00000149115.9|tankyrase 1 binding protein 1, 182kDa
hg19_v2_chr17_-_26733604_26733648	0.044262	FOXJ2	ENST00000584426.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000584995.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr18_+_44812072_44812096	0.0428162	FOXJ2	ENST00000598649.1|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1	ENST00000586905.2|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1
hg19_v2_chr11_+_827248_827326	0.0421484	FOXJ2	ENST00000527089.1|EFCAB4A|ENSG00000177685.12|EF-hand calcium binding domain 4A 	ENST00000530183.1|EFCAB4A|ENSG00000177685.12|EF-hand calcium binding domain 4A
hg19_v2_chr19_-_55677920_55677989	0.0417804	FOXJ2	ENST00000524407.2|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000526003.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000534170.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chr14_+_31959154_31959178	0.0376052	FOXJ2	ENST00000550005.1|NUBPL|ENSG00000151413.12|nucleotide binding protein-like
hg19_v2_chr11_+_6226782_6226796	0.0369208	FOXJ2	ENST00000316375.2|C11orf42|ENSG00000180878.2|chromosome 11 open reading frame 42
hg19_v2_chr1_-_16763685_16763685	0.0362349	FOXJ2	ENST00000540400.1|SPATA21|ENSG00000187144.7|spermatogenesis associated 21
hg19_v2_chr1_+_117963209_117963245	0.0355358	FOXJ2	ENST00000449370.2|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr1_+_73771844_73771922	0.0350167	FOXJ2	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr10_+_33271469_33271479	0.0345172	FOXJ2	ENST00000414157.1|RP11-462L8.1|ENSG00000229656.2|RP11-462L8.1
hg19_v2_chr8_+_128426535_128426535	0.0332841	FOXJ2	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr1_+_149239529_149239531	0.0331897	FOXJ2	ENST00000457216.2|RP11-403I13.4|ENSG00000223779.4|RP11-403I13.4
hg19_v2_chr1_+_223889310_223889347	0.0331593	FOXJ2	ENST00000434648.1|CAPN2|ENSG00000162909.13|calpain 2, (m/II) large subunit
hg19_v2_chr6_-_43021437_43021485	0.0327744	FOXJ2	ENST00000265348.3|CUL7|ENSG00000044090.4|cullin 7
hg19_v2_chr11_+_63137251_63137280	0.0316121	FOXJ2	ENST00000310969.4|SLC22A9|ENSG00000149742.5|solute carrier family 22 (organic anion transporter), member 9 	ENST00000279178.3|SLC22A9|ENSG00000149742.5|solute carrier family 22 (organic anion transporter), member 9
hg19_v2_chr21_+_47013566_47013592	0.0314808	FOXJ2	ENST00000441095.1|AL133493.2|ENSG00000233922.1|AL133493.2	ENST00000424569.1|AL133493.2|ENSG00000233922.1|AL133493.2
hg19_v2_chr19_+_13134772_13134846	0.0312094	FOXJ2	ENST00000587760.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000585575.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr15_+_67430339_67430366	0.031097	FOXJ2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr17_-_56494713_56494851	0.0307131	FOXJ2	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr16_+_5121814_5121855	0.0306174	FOXJ2	ENST00000262374.5|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 	ENST00000586840.1|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
hg19_v2_chr4_-_90756769_90756846	0.0298132	FOXJ2	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_+_22778337_22778472	0.0297603	FOXJ2	ENST00000404138.1|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000400239.2|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000375647.4|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000374651.4|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40
hg19_v2_chrX_+_48660107_48660185	0.0296939	FOXJ2	ENST00000376643.2|HDAC6|ENSG00000094631.14|histone deacetylase 6
hg19_v2_chr2_-_85641162_85641197	0.0293753	FOXJ2	ENST00000447219.2|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like 	ENST00000409670.1|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like 	ENST00000409724.1|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like
hg19_v2_chr3_+_132036207_132036218	0.0289948	FOXJ2	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr5_-_127418573_127418754	0.0278519	FOXJ2	ENST00000508353.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000508878.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000501652.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000514409.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3
hg19_v2_chr6_-_43021612_43021683	0.0265737	FOXJ2	ENST00000535468.1|CUL7|ENSG00000044090.4|cullin 7
hg19_v2_chr21_-_27423339_27423352	0.0263257	FOXJ2	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr20_+_12989895_12989997	0.0256302	FOXJ2	ENST00000450297.1|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3
hg19_v2_chr16_-_90038866_90038942	0.0256153	FOXJ2	ENST00000314994.3|CENPBD1|ENSG00000177946.4|CENPB DNA-binding domains containing 1
hg19_v2_chr20_-_44007014_44007033	0.0256027	FOXJ2	ENST00000372726.3|TP53TG5|ENSG00000124251.6|TP53 target 5 	ENST00000537995.1|TP53TG5|ENSG00000124251.6|TP53 target 5
hg19_v2_chrX_+_99899180_99899215	0.0247177	FOXJ2	ENST00000373004.3|SRPX2|ENSG00000102359.5|sushi-repeat containing protein, X-linked 2
hg19_v2_chr2_+_120770581_120770608	0.0246207	FOXJ2	ENST00000263713.5|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr2_+_101591314_101591333	0.0244762	FOXJ2	ENST00000450763.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr16_-_30440530_30440614	0.0242981	FOXJ2	ENST00000568434.1|DCTPP1|ENSG00000179958.4|dCTP pyrophosphatase 1
hg19_v2_chr2_-_74619152_74619219	0.0240885	FOXJ2	ENST00000440727.1|DCTN1|ENSG00000204843.8|dynactin 1 	ENST00000409240.1|DCTN1|ENSG00000204843.8|dynactin 1
hg19_v2_chr12_-_57941004_57941114	0.0240806	FOXJ2	ENST00000550750.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000548249.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50)
hg19_v2_chr21_-_37451680_37451687	0.0236182	FOXJ2	ENST00000399201.1|SETD4|ENSG00000185917.9|SET domain containing 4
hg19_v2_chr1_+_36335351_36335418	0.0233857	FOXJ2	ENST00000373206.1|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr6_+_26124373_26124431	0.02312	FOXJ2	ENST00000377791.2|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac 	ENST00000602637.1|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac
hg19_v2_chr5_-_96209315_96209315	0.0227339	FOXJ2	ENST00000504056.1|CTD-2260A17.2|ENSG00000247121.2|Uncharacterized protein
hg19_v2_chr12_-_54071181_54071185	0.0225445	FOXJ2	ENST00000338662.5|ATP5G2|ENSG00000135390.13|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)
hg19_v2_chr4_-_47983519_47983583	0.0225218	FOXJ2	ENST00000358519.4|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000544810.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000402813.3|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr7_+_73242069_73242082	0.0225141	FOXJ2	ENST00000435050.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr7_-_112726393_112726567	0.0220594	FOXJ2	ENST00000449591.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000449735.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000438062.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000424100.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chrX_+_22056165_22056173	0.0203632	FOXJ2	ENST00000535894.1|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr1_+_197237352_197237543	0.0202109	FOXJ2	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr7_-_144435985_144436015	0.0196743	FOXJ2	ENST00000549981.1|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr4_-_114438763_114438799	0.0191597	FOXJ2	ENST00000509594.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr7_-_33140498_33140517	0.0191207	FOXJ2	ENST00000448915.1|RP9|ENSG00000164610.4|retinitis pigmentosa 9 (autosomal dominant)
hg19_v2_chr9_-_26892765_26892822	0.0185457	FOXJ2	ENST00000520187.1|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1 	ENST00000333916.5|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1
hg19_v2_chr17_-_2117600_2117643	0.0185304	FOXJ2	ENST00000572369.1|SMG6|ENSG00000070366.9|SMG6 nonsense mediated mRNA decay factor
hg19_v2_chr4_-_68749745_68749756	0.0184259	FOXJ2	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr17_-_46115122_46115173	0.0179646	FOXJ2	ENST00000006101.4|COPZ2|ENSG00000005243.5|coatomer protein complex, subunit zeta 2
hg19_v2_chr9_+_133569108_133569193	0.0179303	FOXJ2	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
hg19_v2_chr6_+_33422343_33422394	0.0175423	FOXJ2	ENST00000395064.2|ZBTB9|ENSG00000213588.4|zinc finger and BTB domain containing 9
hg19_v2_chr11_-_57417367_57417401	0.0175351	FOXJ2	ENST00000534810.1|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila)
hg19_v2_chr13_-_46716969_46717015	0.0171654	FOXJ2	ENST00000435666.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr12_-_7596735_7596781	0.0169535	FOXJ2	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr8_+_85095769_85095793	0.0164548	FOXJ2	ENST00000518566.1|RALYL|ENSG00000184672.7|RALY RNA binding protein-like
hg19_v2_chr12_+_6833237_6833248	0.0149838	FOXJ2	ENST00000229251.3|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000539735.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000538410.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A
hg19_v2_chr9_-_136006496_136006558	0.0143952	FOXJ2	ENST00000372062.3|RALGDS|ENSG00000160271.10|ral guanine nucleotide dissociation stimulator
hg19_v2_chr1_+_146373546_146373600	0.0143913	FOXJ2	ENST00000446760.2|NBPF12|ENSG00000186275.7|neuroblastoma breakpoint family, member 12
hg19_v2_chr1_-_27701307_27701322	0.0142522	FOXJ2	ENST00000270879.4|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3 	ENST00000354982.2|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3
hg19_v2_chr20_+_56964169_56964182	0.0139157	FOXJ2	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr12_+_1099675_1099751	0.0137759	FOXJ2	ENST00000545318.2|ERC1|ENSG00000082805.15|ELKS/RAB6-interacting/CAST family member 1
hg19_v2_chr12_-_8815404_8815438	0.0136668	FOXJ2	ENST00000359478.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000396549.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr17_-_64225508_64225539	0.0134755	FOXJ2	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr6_-_130543958_130544105	0.0134689	FOXJ2	ENST00000437477.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3 	ENST00000439090.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3
hg19_v2_chr1_-_220263096_220263192	0.0132807	FOXJ2	ENST00000463953.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000354807.3|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000414869.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498237.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498791.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000544404.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000480959.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000322067.7|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1
hg19_v2_chr6_-_99842041_99842087	0.0131329	FOXJ2	ENST00000254759.3|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase 	ENST00000369242.1|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase
hg19_v2_chr8_+_86999516_86999552	0.0125626	FOXJ2	ENST00000521564.1|ATP6V0D2|ENSG00000147614.3|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v2_chr18_+_3447572_3447607	0.0121734	FOXJ2	ENST00000548489.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr7_+_72742178_72742363	0.0119097	FOXJ2	ENST00000442793.1|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000413573.2|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000252037.4|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa
hg19_v2_chr19_-_54619006_54619055	0.0114252	FOXJ2	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr3_-_109056419_109056438	0.0112542	FOXJ2	ENST00000335658.6|DPPA4|ENSG00000121570.8|developmental pluripotency associated 4
hg19_v2_chr9_-_71869642_71869642	0.011206	FOXJ2	ENST00000600472.1|AL358113.1|ENSG00000269295.1|Tight junction protein 2 (Zona occludens 2) isoform 1 variant; Uncharacterized protein
hg19_v2_chr15_-_66797172_66797221	0.0110416	FOXJ2	ENST00000569438.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000569696.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000307961.6|RPL4|ENSG00000174444.10|ribosomal protein L4
hg19_v2_chr22_-_30198075_30198098	0.0106295	FOXJ2	ENST00000411532.1|ASCC2|ENSG00000100325.10|activating signal cointegrator 1 complex subunit 2
hg19_v2_chr16_+_86609939_86609974	0.0106006	FOXJ2	ENST00000593625.1|FOXL1|ENSG00000176678.4|forkhead box L1
hg19_v2_chr12_-_102874416_102874425	0.0104374	FOXJ2	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr15_+_66797627_66797684	0.01035	FOXJ2	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr6_-_170862322_170862429	0.0100386	FOXJ2	ENST00000262193.6|PSMB1|ENSG00000008018.8|proteasome (prosome, macropain) subunit, beta type, 1
hg19_v2_chr9_-_134615443_134615521	0.0098099	FOXJ2	ENST00000372195.1|RAPGEF1|ENSG00000107263.14|Rap guanine nucleotide exchange factor (GEF) 1
hg19_v2_chr8_-_54755789_54755876	0.00971729	FOXJ2	ENST00000359530.2|ATP6V1H|ENSG00000047249.12|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
hg19_v2_chr4_-_90757364_90757396	0.00954349	FOXJ2	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr9_+_4662282_4662345	0.00912659	FOXJ2	ENST00000381883.2|PPAPDC2|ENSG00000205808.4|phosphatidic acid phosphatase type 2 domain containing 2
hg19_v2_chr9_+_5890802_5890922	0.00870061	FOXJ2	ENST00000381477.3|MLANA|ENSG00000120215.5|melan-A 	ENST00000381476.1|MLANA|ENSG00000120215.5|melan-A 	ENST00000381471.1|MLANA|ENSG00000120215.5|melan-A
hg19_v2_chr8_+_38585704_38585867	0.00860557	FOXJ2	ENST00000519416.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520615.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr8_-_82608409_82608409	0.00855243	FOXJ2	ENST00000518568.1|SLC10A5|ENSG00000253598.1|solute carrier family 10, member 5
hg19_v2_chr3_+_10157276_10157377	0.00852422	FOXJ2	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr19_+_54619125_54619189	0.00793135	FOXJ2	ENST00000445811.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000419967.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000445124.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000447810.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31
hg19_v2_chr12_-_8815477_8815490	0.00787801	FOXJ2	ENST00000433590.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr22_+_46449674_46449774	0.00751861	FOXJ2	ENST00000381051.2|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr6_-_26124138_26124168	0.00737901	FOXJ2	ENST00000314332.5|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc 	ENST00000396984.1|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc
hg19_v2_chr19_-_49865639_49865718	0.00729629	FOXJ2	ENST00000593945.1|TEAD2|ENSG00000074219.9|TEA domain family member 2 	ENST00000601519.1|TEAD2|ENSG00000074219.9|TEA domain family member 2 	ENST00000539846.1|TEAD2|ENSG00000074219.9|TEA domain family member 2 	ENST00000596757.1|TEAD2|ENSG00000074219.9|TEA domain family member 2 	ENST00000311227.2|TEAD2|ENSG00000074219.9|TEA domain family member 2
hg19_v2_chrX_+_107683096_107683121	0.00709946	FOXJ2	ENST00000328300.6|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5 	ENST00000361603.2|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5
hg19_v2_chr4_-_164534657_164534701	0.00689299	FOXJ2	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr2_+_157330081_157330104	0.0067098	FOXJ2	ENST00000409674.1|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr15_-_34628951_34629045	0.0065297	FOXJ2	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr4_-_122148620_122148647	0.00632957	FOXJ2	ENST00000509841.1|TNIP3|ENSG00000050730.11|TNFAIP3 interacting protein 3
hg19_v2_chr4_+_89299885_89299897	0.00569619	FOXJ2	ENST00000380265.5|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 	ENST00000273960.3|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
hg19_v2_chr8_+_77596014_77596033	0.00561981	FOXJ2	ENST00000523885.1|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr12_-_92536433_92536459	0.00491708	FOXJ2	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr1_+_114472992_114473127	0.00464655	FOXJ2	ENST00000514621.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr9_-_86571628_86571639	0.00442322	FOXJ2	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr8_-_33424636_33424653	0.00415373	FOXJ2	ENST00000256257.1|RNF122|ENSG00000133874.1|ring finger protein 122
hg19_v2_chr8_-_95274536_95274578	0.00371058	FOXJ2	ENST00000297596.2|GEM|ENSG00000164949.3|GTP binding protein overexpressed in skeletal muscle 	ENST00000396194.2|GEM|ENSG00000164949.3|GTP binding protein overexpressed in skeletal muscle
hg19_v2_chr15_+_42697065_42697078	0.00349035	FOXJ2	ENST00000565559.1|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr4_+_78804393_78804393	0.00344314	FOXJ2	ENST00000502384.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr15_+_42697018_42697035	0.0034197	FOXJ2	ENST00000397204.4|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr20_+_36373032_36373047	0.00338986	FOXJ2	ENST00000373473.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr6_-_56507586_56507794	0.0032673	FOXJ2	ENST00000439203.1|DST|ENSG00000151914.13|dystonin 	ENST00000518935.1|DST|ENSG00000151914.13|dystonin 	ENST00000446842.2|DST|ENSG00000151914.13|dystonin 	ENST00000370765.6|DST|ENSG00000151914.13|dystonin 	ENST00000244364.6|DST|ENSG00000151914.13|dystonin
hg19_v2_chr12_+_56495115_56495115	0.00300435	FOXJ2	ENST00000548861.1|RP11-603J24.9|ENSG00000257411.1|Uncharacterized protein
hg19_v2_chr17_-_27054952_27054959	0.00296893	FOXJ2	ENST00000580518.1|TLCD1|ENSG00000160606.6|TLC domain containing 1
hg19_v2_chr1_+_244624678_244624739	0.00277349	FOXJ2	ENST00000366534.4|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000366533.4|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000428042.1|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000366531.3|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101
hg19_v2_chr1_+_162039558_162039587	0.00268846	FOXJ2	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr1_+_150122034_150122170	0.00255196	FOXJ2	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr2_+_120770645_120770669	0.00253577	FOXJ2	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr6_+_31082603_31082612	0.00239074	FOXJ2	ENST00000259881.9|PSORS1C1|ENSG00000204540.6|psoriasis susceptibility 1 candidate 1
hg19_v2_chr1_-_240775447_240775462	0.00236391	FOXJ2	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr1_-_94079648_94079671	0.00228381	FOXJ2	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr18_-_3013307_3013342	0.00211404	FOXJ2	ENST00000584294.1|LPIN2|ENSG00000101577.5|lipin 2
hg19_v2_chr20_+_55926583_55926623	0.00209456	FOXJ2	ENST00000395840.2|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr5_-_34919094_34919094	0.00207429	FOXJ2	ENST00000341754.4|RAD1|ENSG00000113456.14|RAD1 homolog (S. pombe)
hg19_v2_chr5_-_110062349_110062380	0.00193433	FOXJ2	ENST00000511883.2|TMEM232|ENSG00000186952.10|transmembrane protein 232 	ENST00000455884.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr1_-_72566613_72566642	0.00176214	FOXJ2	ENST00000306821.3|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr10_-_111713633_111713668	0.0016676	FOXJ2	ENST00000538668.1|RP11-451M19.3|ENSG00000203876.5|Uncharacterized protein  	ENST00000369657.1|RP11-451M19.3|ENSG00000203876.5|Uncharacterized protein  	ENST00000369655.1|RP11-451M19.3|ENSG00000203876.5|Uncharacterized protein
hg19_v2_chr1_+_93544791_93544807	0.00154902	FOXJ2	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr17_-_40215075_40215075	0.00154294	FOXJ2	ENST00000436535.3|ZNF385C|ENSG00000187595.10|zinc finger protein 385C
hg19_v2_chr14_+_75761099_75761114	0.00148667	FOXJ2	ENST00000561000.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5	ENST00000558575.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5
hg19_v2_chr1_-_85100703_85100703	0.00133183	FOXJ2	ENST00000370624.1|C1orf180|ENSG00000180869.3|chromosome 1 open reading frame 180
hg19_v2_chrX_+_56644819_56644825	0.00106117	FOXJ2	ENST00000446028.1|RP11-431N15.2|ENSG00000230105.1|RP11-431N15.2
hg19_v2_chr1_-_38019878_38019905	0.000845892	FOXJ2	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr16_-_66519747_66519747	0.000793132	FOXJ2	ENST00000544589.1|AC132186.1|ENSG00000247270.2|CDNA FLJ27243 fis, clone SYN08134; Uncharacterized protein
hg19_v2_chr12_-_102874378_102874394	0.000741222	FOXJ2	ENST00000456098.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr17_-_33521412_33521412	0.000710032	FOXJ2	ENST00000297307.5|SLC35G3|ENSG00000164729.6|solute carrier family 35, member G3
hg19_v2_chr2_+_210517895_210518021	0.00059342	FOXJ2	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr9_+_131683174_131683282	0.000566952	FOXJ2	ENST00000372592.3|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1 	ENST00000428610.1|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1
hg19_v2_chrX_+_55744228_55744318	0.00049441	FOXJ2	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr19_+_35899569_35899727	0.000290351	FOXJ2	ENST00000600405.1|AC002511.1|ENSG00000205786.4|AC002511.1
hg19_v2_chr1_+_28879588_28879624	0.000207309	FOXJ2	ENST00000373830.3|TRNAU1AP|ENSG00000180098.5|tRNA selenocysteine 1 associated protein 1
hg19_v2_chr1_-_60392452_60392499	0.000104902	FOXJ2	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
