hg19_v2_chr12_-_12714006_12714021	0.62778	FOXA2_FOXJ3	ENST00000541207.1|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr4_+_103790462_103790537	0.570795	FOXA2_FOXJ3	ENST00000503643.1|CISD2|ENSG00000145354.5|CDGSH iron sulfur domain 2
hg19_v2_chr10_+_111985837_111985844	0.528331	FOXA2_FOXJ3	ENST00000393134.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_+_161035655_161035655	0.527297	FOXA2_FOXJ3	ENST00000600454.1|AL591806.1|ENSG00000268154.1|Uncharacterized protein
hg19_v2_chr12_-_12714025_12714064	0.456398	FOXA2_FOXJ3	ENST00000539940.1|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr17_-_49021974_49022074	0.448335	FOXA2_FOXJ3	ENST00000501718.2|RP11-700H6.1|ENSG00000247011.2|RP11-700H6.1
hg19_v2_chr1_+_246729815_246729841	0.418855	FOXA2_FOXJ3	ENST00000366511.1|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr2_+_109223595_109223617	0.417272	FOXA2_FOXJ3	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr8_-_80993010_80993073	0.414515	FOXA2_FOXJ3	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr3_+_159570722_159570733	0.407475	FOXA2_FOXJ3	ENST00000482804.1|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr10_-_14050522_14050584	0.378266	FOXA2_FOXJ3	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr5_-_57854070_57854070	0.325289	FOXA2_FOXJ3	ENST00000504333.1|CTD-2117L12.1|ENSG00000250127.1|Uncharacterized protein
hg19_v2_chr5_-_159846066_159846095	0.318896	FOXA2_FOXJ3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr1_-_238108575_238108575	0.318545	FOXA2_FOXJ3	ENST00000604646.1|MTRNR2L11|ENSG00000270188.1|MT-RNR2-like 11 (pseudogene)
hg19_v2_chr5_+_159436120_159436176	0.293778	FOXA2_FOXJ3	ENST00000522793.1|TTC1|ENSG00000113312.6|tetratricopeptide repeat domain 1 	ENST00000231238.5|TTC1|ENSG00000113312.6|tetratricopeptide repeat domain 1
hg19_v2_chr5_-_137674000_137674044	0.289364	FOXA2_FOXJ3	ENST00000510119.1|CDC25C|ENSG00000158402.14|cell division cycle 25C 	ENST00000513970.1|CDC25C|ENSG00000158402.14|cell division cycle 25C
hg19_v2_chr2_-_87248975_87248975	0.288562	FOXA2_FOXJ3	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr5_+_169011033_169011108	0.288341	FOXA2_FOXJ3	ENST00000513795.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr7_+_151038850_151038915	0.288236	FOXA2_FOXJ3	ENST00000355851.4|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000566856.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000470229.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1
hg19_v2_chr11_+_65851443_65851457	0.283192	FOXA2_FOXJ3	ENST00000533756.1|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr11_-_85780853_85780936	0.281962	FOXA2_FOXJ3	ENST00000531930.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528398.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr16_+_10479906_10479925	0.278559	FOXA2_FOXJ3	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr11_+_34643600_34643750	0.277524	FOXA2_FOXJ3	ENST00000530286.1|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000533754.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr1_-_207095324_207095357	0.275975	FOXA2_FOXJ3	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr2_+_149402989_149402989	0.271599	FOXA2_FOXJ3	ENST00000397424.2|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr13_-_41240717_41240735	0.270488	FOXA2_FOXJ3	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr6_+_21666633_21666681	0.266037	FOXA2_FOXJ3	ENST00000606851.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr10_+_111985713_111985774	0.265835	FOXA2_FOXJ3	ENST00000239007.7|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr9_-_94877658_94877706	0.264522	FOXA2_FOXJ3	ENST00000262554.2|SPTLC1|ENSG00000090054.9|serine palmitoyltransferase, long chain base subunit 1 	ENST00000337841.4|SPTLC1|ENSG00000090054.9|serine palmitoyltransferase, long chain base subunit 1
hg19_v2_chr5_-_98262240_98262240	0.263511	FOXA2_FOXJ3	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr8_-_40755333_40755352	0.256787	FOXA2_FOXJ3	ENST00000297737.6|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4 	ENST00000315769.7|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4
hg19_v2_chr14_-_22938665_22938690	0.253952	FOXA2_FOXJ3	ENST00000535880.2|TRDV3|ENSG00000256590.2|T cell receptor delta variable 3
hg19_v2_chr4_+_146403912_146403972	0.252459	FOXA2_FOXJ3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr18_+_21033239_21033302	0.252257	FOXA2_FOXJ3	ENST00000581585.1|RIOK3|ENSG00000101782.10|RIO kinase 3 	ENST00000577501.1|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr16_-_30265831_30265831	0.251272	FOXA2_FOXJ3	ENST00000568053.1|RP11-347C12.1|ENSG00000198064.9|Putative NPIP-like protein LOC613037
hg19_v2_chr16_-_21442874_21442874	0.24474	FOXA2_FOXJ3	ENST00000534903.1|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr12_-_106480587_106480734	0.243764	FOXA2_FOXJ3	ENST00000548902.1|NUAK1|ENSG00000074590.9|NUAK family, SNF1-like kinase, 1
hg19_v2_chr9_-_21305312_21305312	0.240079	FOXA2_FOXJ3	ENST00000259555.4|IFNA5|ENSG00000147873.4|interferon, alpha 5
hg19_v2_chr9_-_20382446_20382493	0.238679	FOXA2_FOXJ3	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr17_-_30228678_30228784	0.238261	FOXA2_FOXJ3	ENST00000261708.4|UTP6|ENSG00000108651.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chrX_-_47863348_47863412	0.237235	FOXA2_FOXJ3	ENST00000376943.3|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000396965.1|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000305127.6|ZNF182|ENSG00000147118.6|zinc finger protein 182
hg19_v2_chr2_+_175260451_175260513	0.232751	FOXA2_FOXJ3	ENST00000458563.1|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000409673.3|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000272732.6|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000435964.1|SCRN3|ENSG00000144306.9|secernin 3
hg19_v2_chr2_+_109204909_109204928	0.229073	FOXA2_FOXJ3	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr16_-_80926457_80926494	0.228278	FOXA2_FOXJ3	ENST00000563626.1|RP11-314O13.1|ENSG00000260896.1|RP11-314O13.1	ENST00000562231.1|RP11-314O13.1|ENSG00000260896.1|RP11-314O13.1
hg19_v2_chr17_-_26662464_26662519	0.223072	FOXA2_FOXJ3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr3_-_58523010_58523078	0.222541	FOXA2_FOXJ3	ENST00000459701.2|ACOX2|ENSG00000168306.8|acyl-CoA oxidase 2, branched chain 	ENST00000302819.5|ACOX2|ENSG00000168306.8|acyl-CoA oxidase 2, branched chain
hg19_v2_chr2_+_191513959_191514047	0.222049	FOXA2_FOXJ3	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr2_-_37193606_37193633	0.22119	FOXA2_FOXJ3	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr12_-_68696652_68696661	0.217352	FOXA2_FOXJ3	ENST00000539972.1|MDM1|ENSG00000111554.10|Mdm1 nuclear protein homolog (mouse)
hg19_v2_chr4_+_26862313_26862334	0.215174	FOXA2_FOXJ3	ENST00000467087.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000382009.3|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000237364.5|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr3_+_132316081_132316102	0.209461	FOXA2_FOXJ3	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr15_+_57998923_57998934	0.207035	FOXA2_FOXJ3	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr10_+_124739964_124739994	0.202011	FOXA2_FOXJ3	ENST00000406217.2|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr15_+_35270552_35270552	0.199422	FOXA2_FOXJ3	ENST00000391457.2|AC114546.1|ENSG00000212768.2|HCG37415; PRO1914; Uncharacterized protein
hg19_v2_chr1_+_92545862_92545917	0.197636	FOXA2_FOXJ3	ENST00000370382.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8 	ENST00000342818.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8
hg19_v2_chr19_-_52307357_52307368	0.19651	FOXA2_FOXJ3	ENST00000594900.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr6_-_52109335_52109335	0.196279	FOXA2_FOXJ3	ENST00000336123.4|IL17F|ENSG00000112116.9|interleukin 17F
hg19_v2_chr17_+_71229346_71229365	0.195715	FOXA2_FOXJ3	ENST00000535032.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000582793.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr4_+_79567057_79567159	0.195681	FOXA2_FOXJ3	ENST00000503259.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000507802.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr1_+_45140400_45140427	0.195361	FOXA2_FOXJ3	ENST00000453711.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr13_-_103346854_103346854	0.193804	FOXA2_FOXJ3	ENST00000267273.6|METTL21C|ENSG00000139780.7|methyltransferase like 21C
hg19_v2_chr3_+_171561127_171561306	0.193715	FOXA2_FOXJ3	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr4_+_165675197_165675216	0.193577	FOXA2_FOXJ3	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr6_-_13621126_13621126	0.193206	FOXA2_FOXJ3	ENST00000600057.1|AL441883.1|ENSG00000268059.1|Uncharacterized protein
hg19_v2_chr3_+_148447887_148447911	0.192056	FOXA2_FOXJ3	ENST00000475347.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000474935.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000461609.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chr1_+_203765437_203765437	0.192037	FOXA2_FOXJ3	ENST00000550078.1|ZBED6|ENSG00000257315.1|zinc finger, BED-type containing 6
hg19_v2_chr2_-_175260368_175260450	0.191801	FOXA2_FOXJ3	ENST00000342016.3|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1 	ENST00000362053.5|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1
hg19_v2_chr3_-_185641681_185641781	0.190319	FOXA2_FOXJ3	ENST00000259043.7|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila)
hg19_v2_chr14_+_97263641_97263764	0.190064	FOXA2_FOXJ3	ENST00000216639.3|VRK1|ENSG00000100749.3|vaccinia related kinase 1
hg19_v2_chr15_+_79166065_79166163	0.189889	FOXA2_FOXJ3	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr1_+_95616933_95616933	0.187875	FOXA2_FOXJ3	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr16_+_53469525_53469598	0.187749	FOXA2_FOXJ3	ENST00000544405.2|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr12_-_21927736_21927768	0.18579	FOXA2_FOXJ3	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr4_-_21950356_21950439	0.181073	FOXA2_FOXJ3	ENST00000447367.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4 	ENST00000382152.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4
hg19_v2_chr5_-_131132614_131132648	0.178535	FOXA2_FOXJ3	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr6_+_123110465_123110480	0.177556	FOXA2_FOXJ3	ENST00000539041.1|SMPDL3A|ENSG00000172594.8|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v2_chr17_+_22022437_22022437	0.175658	FOXA2_FOXJ3	ENST00000540040.1|MTRNR2L1|ENSG00000256618.1|MT-RNR2-like 1
hg19_v2_chr4_+_117220016_117220016	0.175143	FOXA2_FOXJ3	ENST00000604093.1|MTRNR2L13|ENSG00000270394.1|MT-RNR2-like 13 (pseudogene)
hg19_v2_chr3_-_182703688_182703741	0.174182	FOXA2_FOXJ3	ENST00000466812.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000487822.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000460412.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1 	ENST00000469954.1|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr15_+_78857849_78857869	0.173893	FOXA2_FOXJ3	ENST00000299565.5|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr15_-_59041768_59041950	0.171928	FOXA2_FOXJ3	ENST00000402627.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000396140.2|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000559053.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000561288.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr6_+_122793058_122793087	0.171588	FOXA2_FOXJ3	ENST00000392491.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr14_-_102605983_102606042	0.169473	FOXA2_FOXJ3	ENST00000334701.7|HSP90AA1|ENSG00000080824.14|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg19_v2_chr8_+_103540983_103541059	0.168173	FOXA2_FOXJ3	ENST00000523572.1|KB-1980E6.3|ENSG00000253633.1|Uncharacterized protein
hg19_v2_chr17_-_64216748_64216865	0.168135	FOXA2_FOXJ3	ENST00000585162.1|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr2_+_3705785_3705806	0.167489	FOXA2_FOXJ3	ENST00000252505.3|ALLC|ENSG00000151360.5|allantoicase
hg19_v2_chr4_-_170679024_170679104	0.167411	FOXA2_FOXJ3	ENST00000393381.2|C4orf27|ENSG00000056050.6|chromosome 4 open reading frame 27
hg19_v2_chr12_+_49297899_49297955	0.167214	FOXA2_FOXJ3	ENST00000552942.1|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65 	ENST00000320516.4|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr19_-_40732594_40732598	0.165493	FOXA2_FOXJ3	ENST00000430325.2|CNTD2|ENSG00000105219.4|cyclin N-terminal domain containing 2 	ENST00000433940.1|CNTD2|ENSG00000105219.4|cyclin N-terminal domain containing 2
hg19_v2_chr1_+_24018269_24018274	0.164775	FOXA2_FOXJ3	ENST00000374550.3|RPL11|ENSG00000142676.8|ribosomal protein L11
hg19_v2_chr10_-_32217717_32217781	0.164341	FOXA2_FOXJ3	ENST00000396144.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375245.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000344936.2|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375250.5|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12
hg19_v2_chr9_+_70856397_70856397	0.163316	FOXA2_FOXJ3	ENST00000360171.6|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr12_-_122107549_122107572	0.161638	FOXA2_FOXJ3	ENST00000355329.3|MORN3|ENSG00000139714.8|MORN repeat containing 3
hg19_v2_chr10_+_52724028_52724035	0.161212	FOXA2_FOXJ3	ENST00000561565.1|RP11-96B5.4|ENSG00000261368.1|RP11-96B5.4
hg19_v2_chr20_+_33104199_33104260	0.160836	FOXA2_FOXJ3	ENST00000357156.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000417166.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000300469.9|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000374846.3|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1
hg19_v2_chr7_+_26332645_26332674	0.155459	FOXA2_FOXJ3	ENST00000396376.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr19_-_10311868_10311875	0.154622	FOXA2_FOXJ3	ENST00000588118.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000586800.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr11_-_5537920_5537935	0.154111	FOXA2_FOXJ3	ENST00000380184.1|UBQLNL|ENSG00000175518.6|ubiquilin-like
hg19_v2_chr1_+_33439268_33439268	0.153046	FOXA2_FOXJ3	ENST00000594612.1|FKSG48|ENSG00000267885.1|FKSG48
hg19_v2_chr13_+_98086445_98086493	0.152711	FOXA2_FOXJ3	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr1_+_66796401_66796423	0.152583	FOXA2_FOXJ3	ENST00000528771.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr2_+_109204743_109204855	0.151897	FOXA2_FOXJ3	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr16_+_22518495_22518495	0.15131	FOXA2_FOXJ3	ENST00000541154.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr8_+_11666649_11666765	0.149081	FOXA2_FOXJ3	ENST00000528643.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525777.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr5_+_136070614_136070625	0.14892	FOXA2_FOXJ3	ENST00000502421.1|CTB-1I21.1|ENSG00000250284.1|CTB-1I21.1
hg19_v2_chr9_-_70490107_70490246	0.148816	FOXA2_FOXJ3	ENST00000377395.4|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000429800.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000430059.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000377384.1|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000382405.3|CBWD5|ENSG00000147996.12|COBW domain containing 5
hg19_v2_chr1_+_150488205_150488251	0.144559	FOXA2_FOXJ3	ENST00000416894.1|LINC00568|ENSG00000228126.1|long intergenic non-protein coding RNA 568
hg19_v2_chr13_+_73629107_73629148	0.144169	FOXA2_FOXJ3	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr16_-_86542455_86542500	0.143468	FOXA2_FOXJ3	ENST00000595886.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000597578.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000593604.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA
hg19_v2_chr9_-_86432547_86432699	0.143369	FOXA2_FOXJ3	ENST00000376365.3|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1 	ENST00000376371.2|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1
hg19_v2_chr1_-_77685084_77685122	0.142745	FOXA2_FOXJ3	ENST00000370812.3|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000359130.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000445065.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000370813.5|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K
hg19_v2_chr3_-_48956818_48956818	0.142709	FOXA2_FOXJ3	ENST00000408959.2|ARIH2OS|ENSG00000221883.2|ariadne homolog 2 opposite strand
hg19_v2_chr15_+_78857870_78857913	0.14217	FOXA2_FOXJ3	ENST00000559554.1|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr3_-_107099454_107099516	0.140441	FOXA2_FOXJ3	ENST00000593837.1|RP11-446H18.5|ENSG00000239828.2|RP11-446H18.5	ENST00000599431.1|RP11-446H18.5|ENSG00000239828.2|RP11-446H18.5
hg19_v2_chr3_+_130650738_130650888	0.139168	FOXA2_FOXJ3	ENST00000504612.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr14_+_35747825_35747847	0.138715	FOXA2_FOXJ3	ENST00000540871.1|PSMA6|ENSG00000100902.6|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v2_chr11_+_102217936_102218035	0.138328	FOXA2_FOXJ3	ENST00000532832.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000530675.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000533742.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000227758.2|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000532672.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000531259.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000527465.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2
hg19_v2_chr1_-_24194771_24194851	0.13819	FOXA2_FOXJ3	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr19_+_52839515_52839572	0.137096	FOXA2_FOXJ3	ENST00000403906.3|ZNF610|ENSG00000167554.10|zinc finger protein 610 	ENST00000601151.1|ZNF610|ENSG00000167554.10|zinc finger protein 610
hg19_v2_chr19_-_39826639_39826825	0.136353	FOXA2_FOXJ3	ENST00000602185.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000598034.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000601387.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000595636.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000253054.8|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000594700.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000597595.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma
hg19_v2_chr9_-_104198042_104198105	0.135476	FOXA2_FOXJ3	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr8_+_21777159_21777221	0.13435	FOXA2_FOXJ3	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr6_-_131949200_131949299	0.134126	FOXA2_FOXJ3	ENST00000539158.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368058.1|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr6_-_131321863_131321907	0.133409	FOXA2_FOXJ3	ENST00000528282.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr2_+_114195268_114195340	0.133386	FOXA2_FOXJ3	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr2_-_46844242_46844258	0.131352	FOXA2_FOXJ3	ENST00000281382.6|PIGF|ENSG00000151665.8|phosphatidylinositol glycan anchor biosynthesis, class F
hg19_v2_chr6_+_37012607_37012607	0.130726	FOXA2_FOXJ3	ENST00000423336.1|COX6A1P2|ENSG00000226976.1|cytochrome c oxidase subunit VIa polypeptide 1 pseudogene 2
hg19_v2_chr11_+_118398178_118398208	0.130182	FOXA2_FOXJ3	ENST00000302783.4|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36 	ENST00000539546.1|TTC36|ENSG00000172425.6|tetratricopeptide repeat domain 36
hg19_v2_chr1_-_114429997_114430077	0.129693	FOXA2_FOXJ3	ENST00000471267.1|BCL2L15|ENSG00000188761.7|BCL2-like 15 	ENST00000393320.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr19_+_41768561_41768586	0.129596	FOXA2_FOXJ3	ENST00000599719.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000601309.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v2_chr8_-_93978216_93978292	0.128565	FOXA2_FOXJ3	ENST00000517751.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000524107.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr7_-_139876734_139876764	0.126758	FOXA2_FOXJ3	ENST00000006967.5|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr14_-_58893832_58893865	0.126401	FOXA2_FOXJ3	ENST00000556007.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr10_+_70847852_70847874	0.125999	FOXA2_FOXJ3	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr5_+_179135246_179135327	0.125637	FOXA2_FOXJ3	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr18_+_21032781_21032795	0.125026	FOXA2_FOXJ3	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr14_+_104177607_104177607	0.124085	FOXA2_FOXJ3	ENST00000429169.1|AL049840.1|ENSG00000224997.1|Uncharacterized protein; cDNA FLJ53535
hg19_v2_chr3_+_101292939_101293063	0.12403	FOXA2_FOXJ3	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr5_+_218356_218453	0.123641	FOXA2_FOXJ3	ENST00000264932.6|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 	ENST00000504309.1|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 	ENST00000510361.1|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
hg19_v2_chr1_+_246729724_246729794	0.123242	FOXA2_FOXJ3	ENST00000366513.4|CNST|ENSG00000162852.9|consortin, connexin sorting protein 	ENST00000366512.3|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr1_-_145610869_145610942	0.123096	FOXA2_FOXJ3	ENST00000334163.3|POLR3C|ENSG00000186141.4|polymerase (RNA) III (DNA directed) polypeptide C (62kD) 	ENST00000369294.1|POLR3C|ENSG00000186141.4|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v2_chr4_-_111120334_111120361	0.122923	FOXA2_FOXJ3	ENST00000503885.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr6_-_80247140_80247175	0.122308	FOXA2_FOXJ3	ENST00000392959.1|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5 	ENST00000467898.3|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr1_-_28559502_28559570	0.122161	FOXA2_FOXJ3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr7_+_128312346_128312371	0.122036	FOXA2_FOXJ3	ENST00000480462.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000378704.3|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000477515.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2
hg19_v2_chr18_-_52626622_52626739	0.121514	FOXA2_FOXJ3	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chr15_+_86098670_86098685	0.12139	FOXA2_FOXJ3	ENST00000558811.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr10_-_103578162_103578175	0.121067	FOXA2_FOXJ3	ENST00000361464.3|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase) 	ENST00000357797.5|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase) 	ENST00000370094.3|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase)
hg19_v2_chr7_-_23571586_23571660	0.120067	FOXA2_FOXJ3	ENST00000538367.1|TRA2A|ENSG00000164548.6|transformer 2 alpha homolog (Drosophila) 	ENST00000392502.4|TRA2A|ENSG00000164548.6|transformer 2 alpha homolog (Drosophila) 	ENST00000297071.4|TRA2A|ENSG00000164548.6|transformer 2 alpha homolog (Drosophila)
hg19_v2_chr10_-_25010795_25010904	0.118861	FOXA2_FOXJ3	ENST00000416305.1|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21 	ENST00000376410.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr15_-_54051831_54051904	0.118799	FOXA2_FOXJ3	ENST00000557913.1|WDR72|ENSG00000166415.10|WD repeat domain 72 	ENST00000360509.5|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr6_-_42185583_42185618	0.118793	FOXA2_FOXJ3	ENST00000053468.3|MRPS10|ENSG00000048544.5|mitochondrial ribosomal protein S10
hg19_v2_chr5_+_70751442_70751456	0.117397	FOXA2_FOXJ3	ENST00000358731.4|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 	ENST00000380675.2|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
hg19_v2_chr2_-_128615681_128615737	0.11662	FOXA2_FOXJ3	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr2_-_26251481_26251481	0.116505	FOXA2_FOXJ3	ENST00000599234.1|AC013449.1|ENSG00000268412.1|Uncharacterized protein
hg19_v2_chr8_+_48920960_48921011	0.116454	FOXA2_FOXJ3	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr9_+_108463234_108463265	0.116096	FOXA2_FOXJ3	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr5_+_95998714_95998744	0.115581	FOXA2_FOXJ3	ENST00000506811.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000514055.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr4_+_172734548_172734654	0.115442	FOXA2_FOXJ3	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr5_+_79703823_79703845	0.115215	FOXA2_FOXJ3	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr17_-_30185946_30185970	0.115044	FOXA2_FOXJ3	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr6_+_62284008_62284008	0.114709	FOXA2_FOXJ3	ENST00000544932.1|MTRNR2L9|ENSG00000255633.3|MT-RNR2-like 9 (pseudogene)
hg19_v2_chr3_-_64009658_64009687	0.114644	FOXA2_FOXJ3	ENST00000394431.2|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr17_+_67957878_67957903	0.112957	FOXA2_FOXJ3	ENST00000420427.1|AC004562.1|ENSG00000237560.1|AC004562.1
hg19_v2_chr4_-_80994210_80994284	0.111956	FOXA2_FOXJ3	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr2_+_201171064_201171099	0.111672	FOXA2_FOXJ3	ENST00000451764.2|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr19_-_44160768_44160794	0.111558	FOXA2_FOXJ3	ENST00000593447.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr8_+_67344710_67344750	0.110852	FOXA2_FOXJ3	ENST00000379385.4|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000396623.3|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000415254.1|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1
hg19_v2_chr12_+_97306295_97306354	0.110138	FOXA2_FOXJ3	ENST00000457368.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1
hg19_v2_chr2_+_175260514_175260536	0.110082	FOXA2_FOXJ3	ENST00000424069.1|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000427038.1|SCRN3|ENSG00000144306.9|secernin 3
hg19_v2_chr12_-_75905374_75905420	0.110023	FOXA2_FOXJ3	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr6_-_80247105_80247133	0.109639	FOXA2_FOXJ3	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr12_+_56435637_56435745	0.109313	FOXA2_FOXJ3	ENST00000356464.5|RPS26|ENSG00000197728.5|ribosomal protein S26 	ENST00000552361.1|RPS26|ENSG00000197728.5|ribosomal protein S26
hg19_v2_chr15_+_86087267_86087274	0.109064	FOXA2_FOXJ3	ENST00000558166.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr7_+_112063192_112063237	0.108623	FOXA2_FOXJ3	ENST00000005558.4|IFRD1|ENSG00000006652.9|interferon-related developmental regulator 1
hg19_v2_chr20_+_48552908_48552949	0.108528	FOXA2_FOXJ3	ENST00000244061.2|RNF114|ENSG00000124226.7|ring finger protein 114
hg19_v2_chr14_+_32547434_32547446	0.107928	FOXA2_FOXJ3	ENST00000556191.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000554090.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr12_-_76462713_76462773	0.10728	FOXA2_FOXJ3	ENST00000552056.1|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr16_-_24942411_24942481	0.106796	FOXA2_FOXJ3	ENST00000571843.1|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr2_+_201170770_201170882	0.106201	FOXA2_FOXJ3	ENST00000409988.3|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000409385.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr4_-_111119804_111119832	0.105941	FOXA2_FOXJ3	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr10_+_124739911_124739957	0.103692	FOXA2_FOXJ3	ENST00000405485.1|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr4_-_14889791_14889805	0.103599	FOXA2_FOXJ3	ENST00000509654.1|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504 	ENST00000515031.1|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504 	ENST00000505089.2|LINC00504|ENSG00000248360.3|long intergenic non-protein coding RNA 504
hg19_v2_chr13_-_53024725_53024809	0.10343	FOXA2_FOXJ3	ENST00000378060.4|VPS36|ENSG00000136100.8|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v2_chr5_+_65222500_65222601	0.10301	FOXA2_FOXJ3	ENST00000511297.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein 	ENST00000506030.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr1_-_168464875_168464884	0.102946	FOXA2_FOXJ3	ENST00000422253.1|RP5-968D22.3|ENSG00000237658.1|RP5-968D22.3
hg19_v2_chr7_+_142919130_142919130	0.102891	FOXA2_FOXJ3	ENST00000408947.3|TAS2R40|ENSG00000221937.3|taste receptor, type 2, member 40
hg19_v2_chr2_-_201729284_201729359	0.102462	FOXA2_FOXJ3	ENST00000434813.2|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr2_+_171640291_171640311	0.101548	FOXA2_FOXJ3	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr16_+_22517166_22517166	0.101547	FOXA2_FOXJ3	ENST00000356156.3|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr19_+_12721760_12721778	0.101397	FOXA2_FOXJ3	ENST00000600752.1|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000540038.1|ZNF791|ENSG00000173875.9|zinc finger protein 791
hg19_v2_chr21_+_34602377_34602487	0.100329	FOXA2_FOXJ3	ENST00000342101.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000413881.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000443073.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr1_+_174844645_174844684	0.0988408	FOXA2_FOXJ3	ENST00000486220.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr5_+_32531893_32531930	0.0979616	FOXA2_FOXJ3	ENST00000512913.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr8_-_93978357_93978379	0.0976358	FOXA2_FOXJ3	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr8_+_125860939_125861008	0.0969794	FOXA2_FOXJ3	ENST00000525292.1|LINC00964|ENSG00000249816.2|long intergenic non-protein coding RNA 964 	ENST00000528090.1|LINC00964|ENSG00000249816.2|long intergenic non-protein coding RNA 964
hg19_v2_chr10_+_111967345_111967442	0.0952285	FOXA2_FOXJ3	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr6_-_100016527_100016589	0.0949516	FOXA2_FOXJ3	ENST00000523985.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000518714.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000520371.1|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr9_+_127054254_127054276	0.0949107	FOXA2_FOXJ3	ENST00000422297.1|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr12_+_32832134_32832196	0.0947578	FOXA2_FOXJ3	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr17_-_3595181_3595296	0.0928502	FOXA2_FOXJ3	ENST00000552050.1|P2RX5|ENSG00000083454.17|purinergic receptor P2X, ligand-gated ion channel, 5
hg19_v2_chr8_-_93978309_93978331	0.0926691	FOXA2_FOXJ3	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr7_-_66460563_66460605	0.0925527	FOXA2_FOXJ3	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr13_-_38443860_38443939	0.0923725	FOXA2_FOXJ3	ENST00000426868.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379681.3|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000338947.5|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000355779.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000358477.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379673.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4
hg19_v2_chr4_+_160188306_160188323	0.0921456	FOXA2_FOXJ3	ENST00000510510.1|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr20_-_25677465_25677497	0.0919982	FOXA2_FOXJ3	ENST00000252979.5|ZNF337|ENSG00000130684.9|zinc finger protein 337
hg19_v2_chr12_-_71512027_71512027	0.0916757	FOXA2_FOXJ3	ENST00000549357.1|CTD-2021H9.3|ENSG00000258053.1|Uncharacterized protein
hg19_v2_chr3_+_142315294_142315315	0.0914706	FOXA2_FOXJ3	ENST00000464320.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr17_-_19290483_19290553	0.091332	FOXA2_FOXJ3	ENST00000395592.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4 	ENST00000299610.4|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr1_+_52082751_52082781	0.0913049	FOXA2_FOXJ3	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr5_-_150460539_150460640	0.091187	FOXA2_FOXJ3	ENST00000520931.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000520695.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000521591.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000518977.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr8_-_41909496_41909512	0.0910154	FOXA2_FOXJ3	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr2_+_68592305_68592405	0.0902962	FOXA2_FOXJ3	ENST00000234313.7|PLEK|ENSG00000115956.9|pleckstrin
hg19_v2_chr2_-_201729393_201729428	0.090262	FOXA2_FOXJ3	ENST00000321356.4|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr8_+_26247878_26247981	0.0902574	FOXA2_FOXJ3	ENST00000518611.1|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr1_+_145883868_145883868	0.0901632	FOXA2_FOXJ3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr15_-_31283798_31283851	0.0898948	FOXA2_FOXJ3	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr14_+_58894141_58894155	0.0890754	FOXA2_FOXJ3	ENST00000423743.3|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr19_-_52255107_52255162	0.0888276	FOXA2_FOXJ3	ENST00000595042.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1 	ENST00000304748.4|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr7_+_106809406_106809460	0.0880894	FOXA2_FOXJ3	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr7_+_99425633_99425739	0.0880737	FOXA2_FOXJ3	ENST00000354829.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000421837.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000417625.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000342499.4|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000444905.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000415413.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000312017.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000222382.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43
hg19_v2_chr14_+_58894103_58894124	0.0880515	FOXA2_FOXJ3	ENST00000354386.6|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000556134.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr19_+_12721725_12721758	0.0879784	FOXA2_FOXJ3	ENST00000446165.1|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000343325.4|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000458122.3|ZNF791|ENSG00000173875.9|zinc finger protein 791
hg19_v2_chr16_-_28374829_28374829	0.0879764	FOXA2_FOXJ3	ENST00000532254.1|NPIPB6|ENSG00000198156.6|nuclear pore complex interacting protein family, member B6
hg19_v2_chrX_-_41449204_41449229	0.0871264	FOXA2_FOXJ3	ENST00000378179.3|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr16_-_88772670_88772702	0.0861877	FOXA2_FOXJ3	ENST00000562544.1|RNF166|ENSG00000158717.6|ring finger protein 166
hg19_v2_chr14_-_58894223_58894261	0.0860539	FOXA2_FOXJ3	ENST00000555593.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr14_+_56127960_56127979	0.0857415	FOXA2_FOXJ3	ENST00000553624.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr8_-_101962777_101962805	0.0855917	FOXA2_FOXJ3	ENST00000395951.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr2_+_61372226_61372273	0.0853351	FOXA2_FOXJ3	ENST00000426997.1|C2orf74|ENSG00000237651.2|chromosome 2 open reading frame 74
hg19_v2_chr16_+_11439286_11439328	0.0848057	FOXA2_FOXJ3	ENST00000312499.5|RMI2|ENSG00000175643.7|RecQ mediated genome instability 2 	ENST00000576027.1|RMI2|ENSG00000175643.7|RecQ mediated genome instability 2
hg19_v2_chr1_+_221054584_221054584	0.084782	FOXA2_FOXJ3	ENST00000549319.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr19_-_48613987_48614003	0.084683	FOXA2_FOXJ3	ENST00000596138.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr13_+_41885341_41885443	0.0843513	FOXA2_FOXJ3	ENST00000379406.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000379367.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000403412.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
hg19_v2_chr6_+_150263136_150263171	0.0843058	FOXA2_FOXJ3	ENST00000367351.3|ULBP2|ENSG00000131015.4|UL16 binding protein 2
hg19_v2_chr2_-_113191096_113191222	0.0842353	FOXA2_FOXJ3	ENST00000496537.1|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000330575.5|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000302558.3|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8
hg19_v2_chrX_+_134975858_134975885	0.0840118	FOXA2_FOXJ3	ENST00000537770.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chr2_-_27886676_27886714	0.0835129	FOXA2_FOXJ3	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr12_+_20968608_20968673	0.0834989	FOXA2_FOXJ3	ENST00000381541.3|LST3|ENSG00000257046.1|Putative solute carrier organic anion transporter family member 1B7; Uncharacterized protein  	ENST00000540229.1|LST3|ENSG00000257046.1|Putative solute carrier organic anion transporter family member 1B7; Uncharacterized protein  	ENST00000553473.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000554957.1|SLCO1B7|ENSG00000205754.6|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v2_chr12_+_32832203_32832270	0.0833966	FOXA2_FOXJ3	ENST00000553257.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000549701.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000358214.5|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000266481.6|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000551476.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000550154.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000547312.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000414834.2|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000381000.4|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000548750.1|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr9_+_21440440_21440440	0.0830743	FOXA2_FOXJ3	ENST00000276927.1|IFNA1|ENSG00000197919.3|interferon, alpha 1
hg19_v2_chr6_-_105307417_105307435	0.0828466	FOXA2_FOXJ3	ENST00000524020.1|HACE1|ENSG00000085382.7|HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1
hg19_v2_chr4_+_86749045_86749070	0.0824871	FOXA2_FOXJ3	ENST00000514229.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr14_+_56078695_56078784	0.0821446	FOXA2_FOXJ3	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr13_-_99630233_99630348	0.0816461	FOXA2_FOXJ3	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr3_+_156393349_156393363	0.0806179	FOXA2_FOXJ3	ENST00000473702.1|TIPARP|ENSG00000163659.8|TCDD-inducible poly(ADP-ribose) polymerase
hg19_v2_chr12_+_99038919_99038954	0.0804262	FOXA2_FOXJ3	ENST00000551964.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr2_-_86422523_86422595	0.080125	FOXA2_FOXJ3	ENST00000442664.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000409051.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000449247.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial
hg19_v2_chr12_-_12837423_12837501	0.0796643	FOXA2_FOXJ3	ENST00000540510.1|GPR19|ENSG00000183150.3|G protein-coupled receptor 19
hg19_v2_chr5_+_135468516_135468621	0.0793266	FOXA2_FOXJ3	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr8_-_93978333_93978345	0.0793162	FOXA2_FOXJ3	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr17_-_57229155_57229198	0.0786952	FOXA2_FOXJ3	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr7_+_77469439_77469497	0.0786623	FOXA2_FOXJ3	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr1_+_181452678_181452716	0.0785927	FOXA2_FOXJ3	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr1_-_202927388_202927448	0.0784976	FOXA2_FOXJ3	ENST00000426229.1|ADIPOR1|ENSG00000159346.8|adiponectin receptor 1 	ENST00000367254.3|ADIPOR1|ENSG00000159346.8|adiponectin receptor 1
hg19_v2_chr10_+_86184676_86184714	0.0784888	FOXA2_FOXJ3	ENST00000543283.1|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr5_-_218251_218330	0.0783553	FOXA2_FOXJ3	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr20_-_1974692_1974732	0.0782075	FOXA2_FOXJ3	ENST00000217305.2|PDYN|ENSG00000101327.4|prodynorphin 	ENST00000539905.1|PDYN|ENSG00000101327.4|prodynorphin
hg19_v2_chr14_-_31926623_31926656	0.0779416	FOXA2_FOXJ3	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr2_-_3521518_3521518	0.077934	FOXA2_FOXJ3	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr7_-_30009542_30009562	0.0776203	FOXA2_FOXJ3	ENST00000438497.1|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chr11_-_85397167_85397320	0.0772277	FOXA2_FOXJ3	ENST00000316398.3|CCDC89|ENSG00000179071.3|coiled-coil domain containing 89
hg19_v2_chr14_+_102276209_102276242	0.0770362	FOXA2_FOXJ3	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr10_-_73975657_73975739	0.0767113	FOXA2_FOXJ3	ENST00000394919.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000526751.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr1_-_100643765_100643829	0.076525	FOXA2_FOXJ3	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr16_+_81812863_81812877	0.076222	FOXA2_FOXJ3	ENST00000359376.3|PLCG2|ENSG00000197943.5|phospholipase C, gamma 2 (phosphatidylinositol-specific)
hg19_v2_chr3_+_151591422_151591440	0.0761516	FOXA2_FOXJ3	ENST00000362032.5|SUCNR1|ENSG00000198829.5|succinate receptor 1
hg19_v2_chr5_-_131132658_131132719	0.0760793	FOXA2_FOXJ3	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr8_-_93978346_93978355	0.0758963	FOXA2_FOXJ3	ENST00000523580.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr1_+_78470530_78470551	0.0756438	FOXA2_FOXJ3	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr11_-_94227029_94227074	0.0750782	FOXA2_FOXJ3	ENST00000323977.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000536754.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000323929.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr19_-_58662139_58662182	0.0750694	FOXA2_FOXJ3	ENST00000598312.1|ZNF329|ENSG00000181894.10|zinc finger protein 329
hg19_v2_chr6_-_131211534_131211564	0.0746536	FOXA2_FOXJ3	ENST00000456097.2|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr9_+_127962856_127962884	0.0746416	FOXA2_FOXJ3	ENST00000373538.3|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000416065.1|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr12_+_79439405_79439421	0.0745914	FOXA2_FOXJ3	ENST00000552744.1|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr17_+_26662597_26662628	0.074539	FOXA2_FOXJ3	ENST00000544907.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr12_-_15374343_15374416	0.0743869	FOXA2_FOXJ3	ENST00000256953.2|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor 	ENST00000546331.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr2_-_55920952_55921045	0.0738394	FOXA2_FOXJ3	ENST00000447944.2|PNPT1|ENSG00000138035.10|polyribonucleotide nucleotidyltransferase 1
hg19_v2_chr19_+_7580103_7580178	0.0733798	FOXA2_FOXJ3	ENST00000596712.1|ZNF358|ENSG00000198816.5|zinc finger protein 358
hg19_v2_chr6_+_161123270_161123278	0.0727092	FOXA2_FOXJ3	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr1_-_160492994_160493057	0.0724577	FOXA2_FOXJ3	ENST00000368055.1|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368057.3|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368059.3|SLAMF6|ENSG00000162739.9|SLAM family member 6
hg19_v2_chr3_-_15382875_15382889	0.0721581	FOXA2_FOXJ3	ENST00000408919.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr4_-_123542224_123542224	0.0719063	FOXA2_FOXJ3	ENST00000264497.3|IL21|ENSG00000138684.3|interleukin 21
hg19_v2_chr10_-_125853200_125853208	0.0718874	FOXA2_FOXJ3	ENST00000421115.1|CHST15|ENSG00000182022.13|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
hg19_v2_chr12_-_56367101_56367265	0.071806	FOXA2_FOXJ3	ENST00000549233.2|PMEL|ENSG00000185664.10|premelanosome protein
hg19_v2_chr1_+_224370873_224370968	0.0716483	FOXA2_FOXJ3	ENST00000323699.4|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1 	ENST00000391877.3|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1
hg19_v2_chr2_+_88047606_88047606	0.071111	FOXA2_FOXJ3	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr3_-_105588231_105588396	0.0709811	FOXA2_FOXJ3	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr19_-_48614063_48614093	0.0709524	FOXA2_FOXJ3	ENST00000599921.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent) 	ENST00000599111.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr2_-_170430277_170430361	0.0707144	FOXA2_FOXJ3	ENST00000438035.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000453929.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr1_+_239882842_239882850	0.0706933	FOXA2_FOXJ3	ENST00000448020.1|CHRM3|ENSG00000133019.7|cholinergic receptor, muscarinic 3
hg19_v2_chr4_+_74301880_74301964	0.0703454	FOXA2_FOXJ3	ENST00000395792.2|AFP|ENSG00000081051.3|alpha-fetoprotein 	ENST00000226359.2|AFP|ENSG00000081051.3|alpha-fetoprotein
hg19_v2_chr3_+_69928256_69928385	0.0699906	FOXA2_FOXJ3	ENST00000394355.2|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr6_-_100016492_100016526	0.0697591	FOXA2_FOXJ3	ENST00000369217.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000369220.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000482541.2|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr15_+_71185148_71185214	0.0692706	FOXA2_FOXJ3	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr19_-_48613820_48613886	0.0688888	FOXA2_FOXJ3	ENST00000596352.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr3_+_142315225_142315290	0.0688702	FOXA2_FOXJ3	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr6_+_12958137_12958234	0.0688494	FOXA2_FOXJ3	ENST00000457702.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379345.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr14_+_74551650_74551680	0.0686598	FOXA2_FOXJ3	ENST00000554938.1|LIN52|ENSG00000205659.6|lin-52 homolog (C. elegans)
hg19_v2_chr2_+_201170596_201170619	0.0684669	FOXA2_FOXJ3	ENST00000439084.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000409718.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr21_-_16254231_16254327	0.0671202	FOXA2_FOXJ3	ENST00000412426.1|AF127936.7|ENSG00000235609.4|AF127936.7	ENST00000418954.1|AF127936.7|ENSG00000235609.4|AF127936.7
hg19_v2_chr12_+_32687221_32687267	0.066424	FOXA2_FOXJ3	ENST00000525053.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr2_+_110551851_110551977	0.0663332	FOXA2_FOXJ3	ENST00000272454.6|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000430736.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000016946.3|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000441344.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5
hg19_v2_chr16_+_28857957_28857969	0.0662672	FOXA2_FOXJ3	ENST00000567536.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr9_+_131684027_131684088	0.0662304	FOXA2_FOXJ3	ENST00000426694.1|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1
hg19_v2_chr5_+_147774275_147774340	0.06572	FOXA2_FOXJ3	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr10_+_94352956_94353043	0.0655156	FOXA2_FOXJ3	ENST00000260731.3|KIF11|ENSG00000138160.4|kinesin family member 11
hg19_v2_chr1_+_203830703_203830743	0.0654429	FOXA2_FOXJ3	ENST00000414487.2|SNRPE|ENSG00000182004.8|small nuclear ribonucleoprotein polypeptide E
hg19_v2_chr2_+_149402553_149402568	0.0653671	FOXA2_FOXJ3	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chrX_-_65259914_65259967	0.0653457	FOXA2_FOXJ3	ENST00000374737.4|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4 	ENST00000455586.2|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4
hg19_v2_chr1_+_15853308_15853413	0.0650616	FOXA2_FOXJ3	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr12_-_96390063_96390076	0.0648702	FOXA2_FOXJ3	ENST00000541929.1|HAL|ENSG00000084110.6|histidine ammonia-lyase
hg19_v2_chr11_-_94226964_94227025	0.0648019	FOXA2_FOXJ3	ENST00000538923.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000540013.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000407439.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000393241.4|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr12_-_96390108_96390143	0.0646219	FOXA2_FOXJ3	ENST00000538703.1|HAL|ENSG00000084110.6|histidine ammonia-lyase 	ENST00000261208.3|HAL|ENSG00000084110.6|histidine ammonia-lyase
hg19_v2_chr14_-_58894332_58894380	0.0646214	FOXA2_FOXJ3	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr11_-_92930556_92930621	0.0646114	FOXA2_FOXJ3	ENST00000529184.1|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr4_-_76008706_76008878	0.0643028	FOXA2_FOXJ3	ENST00000562355.1|RP11-44F21.5|ENSG00000260265.1|RP11-44F21.5	ENST00000563602.1|RP11-44F21.5|ENSG00000260265.1|RP11-44F21.5
hg19_v2_chr13_+_52598827_52598827	0.0642613	FOXA2_FOXJ3	ENST00000521776.2|UTP14C|ENSG00000253797.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v2_chr19_-_50666404_50666424	0.0638034	FOXA2_FOXJ3	ENST00000600293.1|IZUMO2|ENSG00000161652.8|IZUMO family member 2
hg19_v2_chr5_-_159846399_159846412	0.0636315	FOXA2_FOXJ3	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr3_+_136649311_136649360	0.0636049	FOXA2_FOXJ3	ENST00000469404.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1 	ENST00000467911.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1
hg19_v2_chr3_+_190333097_190333113	0.0634481	FOXA2_FOXJ3	ENST00000412080.1|IL1RAP|ENSG00000196083.5|interleukin 1 receptor accessory protein
hg19_v2_chr10_+_7745303_7745363	0.0631187	FOXA2_FOXJ3	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr12_+_2986359_2986421	0.0629253	FOXA2_FOXJ3	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr4_+_57845024_57845037	0.062845	FOXA2_FOXJ3	ENST00000431623.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000441246.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chr12_+_99038998_99039078	0.0628176	FOXA2_FOXJ3	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr4_-_174256276_174256303	0.0628057	FOXA2_FOXJ3	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr10_-_103578182_103578222	0.0627385	FOXA2_FOXJ3	ENST00000439817.1|MGEA5|ENSG00000198408.9|meningioma expressed antigen 5 (hyaluronidase)
hg19_v2_chr5_+_101569696_101569696	0.0626892	FOXA2_FOXJ3	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr14_+_57046530_57046602	0.0621512	FOXA2_FOXJ3	ENST00000536419.1|TMEM260|ENSG00000070269.9|transmembrane protein 260 	ENST00000538838.1|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr13_+_78315348_78315360	0.0619891	FOXA2_FOXJ3	ENST00000441784.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr1_+_207943667_207943684	0.061411	FOXA2_FOXJ3	ENST00000462968.2|CD46|ENSG00000117335.14|CD46 molecule, complement regulatory protein
hg19_v2_chr7_+_2393714_2393749	0.0606293	FOXA2_FOXJ3	ENST00000431643.1|EIF3B|ENSG00000106263.13|eukaryotic translation initiation factor 3, subunit B
hg19_v2_chr2_-_191878681_191878823	0.0603284	FOXA2_FOXJ3	ENST00000409465.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr19_-_48614033_48614048	0.0597814	FOXA2_FOXJ3	ENST00000354276.3|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr1_+_174670143_174670160	0.0595967	FOXA2_FOXJ3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr18_+_158327_158383	0.059531	FOXA2_FOXJ3	ENST00000582707.1|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
hg19_v2_chr19_+_43325937_43326015	0.0594407	FOXA2_FOXJ3	ENST00000425668.1|AC004603.4|ENSG00000225877.1|AC004603.4
hg19_v2_chr21_+_30968360_30968360	0.0591259	FOXA2_FOXJ3	ENST00000333765.4|GRIK1-AS2|ENSG00000183653.4|GRIK1 antisense RNA 2
hg19_v2_chr1_-_92371839_92371892	0.0589345	FOXA2_FOXJ3	ENST00000370399.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr15_-_40398812_40398846	0.0587613	FOXA2_FOXJ3	ENST00000561360.1|BMF|ENSG00000104081.9|Bcl2 modifying factor
hg19_v2_chr3_-_156272924_156272973	0.0587366	FOXA2_FOXJ3	ENST00000467789.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma) 	ENST00000265044.2|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr2_+_65283506_65283527	0.0587326	FOXA2_FOXJ3	ENST00000377990.2|CEP68|ENSG00000011523.9|centrosomal protein 68kDa
hg19_v2_chr15_+_90792760_90792767	0.0586907	FOXA2_FOXJ3	ENST00000339615.5|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13 	ENST00000438251.1|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13
hg19_v2_chr3_-_150920979_150921009	0.0586703	FOXA2_FOXJ3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr8_+_27632083_27632186	0.0585473	FOXA2_FOXJ3	ENST00000519637.1|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr2_+_102413726_102413769	0.0584399	FOXA2_FOXJ3	ENST00000350878.4|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr3_-_71179988_71180085	0.0577448	FOXA2_FOXJ3	ENST00000491238.1|FOXP1|ENSG00000114861.14|forkhead box P1
hg19_v2_chr21_-_16374688_16374703	0.0575844	FOXA2_FOXJ3	ENST00000411932.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr7_-_139876812_139876860	0.0575434	FOXA2_FOXJ3	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr2_-_191878874_191878976	0.0575294	FOXA2_FOXJ3	ENST00000392322.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000392323.2|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000424722.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000361099.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr8_+_27631903_27632045	0.0573919	FOXA2_FOXJ3	ENST00000305188.8|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr5_+_95998673_95998713	0.0572808	FOXA2_FOXJ3	ENST00000514845.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr1_-_43855444_43855478	0.0568303	FOXA2_FOXJ3	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr4_-_142199943_142199958	0.0567799	FOXA2_FOXJ3	ENST00000514347.1|RP11-586L23.1|ENSG00000248747.1|RP11-586L23.1
hg19_v2_chr1_+_247670360_247670414	0.0565569	FOXA2_FOXJ3	ENST00000527084.1|GCSAML|ENSG00000169224.8|germinal center-associated, signaling and motility-like 	ENST00000527541.1|GCSAML|ENSG00000169224.8|germinal center-associated, signaling and motility-like 	ENST00000366490.3|GCSAML|ENSG00000169224.8|germinal center-associated, signaling and motility-like
hg19_v2_chr7_-_6098770_6098861	0.0563294	FOXA2_FOXJ3	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr11_+_69924397_69924449	0.0559907	FOXA2_FOXJ3	ENST00000355303.5|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr14_+_56127989_56128008	0.0559813	FOXA2_FOXJ3	ENST00000555573.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr19_+_46531127_46531136	0.0559801	FOXA2_FOXJ3	ENST00000601033.1|CTC-344H19.4|ENSG00000268401.1|CTC-344H19.4
hg19_v2_chr19_+_52839490_52839508	0.0558643	FOXA2_FOXJ3	ENST00000321287.8|ZNF610|ENSG00000167554.10|zinc finger protein 610
hg19_v2_chr12_-_51718436_51718458	0.0558212	FOXA2_FOXJ3	ENST00000544402.1|BIN2|ENSG00000110934.6|bridging integrator 2
hg19_v2_chr13_-_79980315_79980403	0.0556948	FOXA2_FOXJ3	ENST00000438737.2|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr13_-_103451307_103451380	0.0553404	FOXA2_FOXJ3	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr2_+_12857043_12857127	0.054915	FOXA2_FOXJ3	ENST00000381465.2|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chrX_+_40440146_40440268	0.0546253	FOXA2_FOXJ3	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr6_-_131949305_131949389	0.0537881	FOXA2_FOXJ3	ENST00000368053.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000354577.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000403834.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000540546.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368068.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368060.3|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr5_-_60240858_60240905	0.0537032	FOXA2_FOXJ3	ENST00000426742.2|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000265038.5|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000543101.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000439176.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8
hg19_v2_chr2_-_65593784_65593817	0.053349	FOXA2_FOXJ3	ENST00000443619.2|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chr19_-_9546177_9546224	0.0529848	FOXA2_FOXJ3	ENST00000592292.1|ZNF266|ENSG00000174652.13|zinc finger protein 266 	ENST00000588221.1|ZNF266|ENSG00000174652.13|zinc finger protein 266
hg19_v2_chr2_-_27886460_27886511	0.0527664	FOXA2_FOXJ3	ENST00000404798.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000405491.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000464789.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000406540.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr2_+_46844290_46844384	0.0524915	FOXA2_FOXJ3	ENST00000238892.3|CRIPT|ENSG00000119878.5|cysteine-rich PDZ-binding protein
hg19_v2_chr1_+_220960033_220960101	0.0520422	FOXA2_FOXJ3	ENST00000366910.5|MARC1|ENSG00000186205.8|mitochondrial amidoxime reducing component 1
hg19_v2_chr17_-_1418972_1418995	0.0517701	FOXA2_FOXJ3	ENST00000571274.1|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr1_+_221054411_221054411	0.0512219	FOXA2_FOXJ3	ENST00000427693.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr10_-_63995871_63996022	0.0508948	FOXA2_FOXJ3	ENST00000315289.2|RTKN2|ENSG00000182010.6|rhotekin 2
hg19_v2_chr12_+_54378923_54378970	0.0504062	FOXA2_FOXJ3	ENST00000303460.4|HOXC10|ENSG00000180818.4|homeobox C10
hg19_v2_chr7_+_35756092_35756105	0.0502489	FOXA2_FOXJ3	ENST00000458087.3|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chrX_-_65259900_65259909	0.0500592	FOXA2_FOXJ3	ENST00000412866.2|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4
hg19_v2_chr16_-_25122785_25122876	0.0499241	FOXA2_FOXJ3	ENST00000563962.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1	ENST00000569920.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr11_-_34535332_34535352	0.0494433	FOXA2_FOXJ3	ENST00000257832.2|ELF5|ENSG00000135374.5|E74-like factor 5 (ets domain transcription factor) 	ENST00000429939.2|ELF5|ENSG00000135374.5|E74-like factor 5 (ets domain transcription factor)
hg19_v2_chr3_+_109128961_109129009	0.0490187	FOXA2_FOXJ3	ENST00000489670.1|RP11-702L6.4|ENSG00000228980.3|RP11-702L6.4
hg19_v2_chr6_-_131291572_131291623	0.0486556	FOXA2_FOXJ3	ENST00000529208.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr6_-_122792919_122792970	0.0479313	FOXA2_FOXJ3	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr19_-_51141196_51141302	0.0478151	FOXA2_FOXJ3	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr1_+_174846570_174846584	0.0477737	FOXA2_FOXJ3	ENST00000392064.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr1_-_8075693_8075757	0.0474482	FOXA2_FOXJ3	ENST00000467067.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1
hg19_v2_chr4_+_86525299_86525314	0.0473377	FOXA2_FOXJ3	ENST00000512201.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr4_-_186456652_186456668	0.047117	FOXA2_FOXJ3	ENST00000284767.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3 	ENST00000284770.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr9_-_140142222_140142229	0.0470888	FOXA2_FOXJ3	ENST00000344774.4|FAM166A|ENSG00000188163.6|family with sequence similarity 166, member A 	ENST00000388932.2|FAM166A|ENSG00000188163.6|family with sequence similarity 166, member A
hg19_v2_chr14_+_23938891_23938953	0.0470783	FOXA2_FOXJ3	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr15_-_43559055_43559131	0.0468661	FOXA2_FOXJ3	ENST00000220420.5|TGM5|ENSG00000104055.10|transglutaminase 5 	ENST00000349114.4|TGM5|ENSG00000104055.10|transglutaminase 5
hg19_v2_chr1_-_169555709_169555730	0.046835	FOXA2_FOXJ3	ENST00000546081.1|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr10_-_21186144_21186247	0.0466328	FOXA2_FOXJ3	ENST00000377119.1|NEBL|ENSG00000078114.14|nebulette
hg19_v2_chr1_-_40562908_40562931	0.0465193	FOXA2_FOXJ3	ENST00000527311.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000449045.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000372779.4|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1
hg19_v2_chr4_-_80994619_80994633	0.0460658	FOXA2_FOXJ3	ENST00000404191.1|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr9_+_127962795_127962834	0.0457453	FOXA2_FOXJ3	ENST00000394125.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000259460.8|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000373544.1|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr10_-_69597828_69597854	0.0456923	FOXA2_FOXJ3	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr2_+_233527443_233527542	0.0455202	FOXA2_FOXJ3	ENST00000410095.1|EFHD1|ENSG00000115468.7|EF-hand domain family, member D1
hg19_v2_chr17_+_7942335_7942385	0.0451982	FOXA2_FOXJ3	ENST00000380183.4|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000572022.1|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000380173.2|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B
hg19_v2_chr5_-_58571935_58571951	0.0447231	FOXA2_FOXJ3	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr12_+_59989918_59989965	0.0446495	FOXA2_FOXJ3	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr7_-_14028488_14028516	0.044576	FOXA2_FOXJ3	ENST00000405358.4|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr2_-_46844159_46844209	0.0445366	FOXA2_FOXJ3	ENST00000474980.1|PIGF|ENSG00000151665.8|phosphatidylinositol glycan anchor biosynthesis, class F 	ENST00000306465.4|PIGF|ENSG00000151665.8|phosphatidylinositol glycan anchor biosynthesis, class F
hg19_v2_chr2_+_201170703_201170716	0.0445277	FOXA2_FOXJ3	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr9_-_35812140_35812191	0.0445097	FOXA2_FOXJ3	ENST00000497810.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000396638.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000484764.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr19_-_40030861_40030873	0.0444696	FOXA2_FOXJ3	ENST00000390658.2|EID2|ENSG00000176396.9|EP300 interacting inhibitor of differentiation 2
hg19_v2_chr8_+_66933779_66933800	0.0441114	FOXA2_FOXJ3	ENST00000276570.5|DNAJC5B|ENSG00000147570.5|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v2_chr5_+_71616188_71616230	0.0440338	FOXA2_FOXJ3	ENST00000380639.5|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000543322.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000503868.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000510676.2|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000536805.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2
hg19_v2_chr17_-_76824975_76825046	0.0438421	FOXA2_FOXJ3	ENST00000586066.2|USP36|ENSG00000055483.15|ubiquitin specific peptidase 36
hg19_v2_chr1_-_243417762_243417788	0.0434321	FOXA2_FOXJ3	ENST00000522191.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr10_-_73848086_73848099	0.0433087	FOXA2_FOXJ3	ENST00000536168.1|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chr3_-_135916073_135916096	0.0430279	FOXA2_FOXJ3	ENST00000481989.1|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr2_-_170430366_170430390	0.0423654	FOXA2_FOXJ3	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr19_-_44160692_44160725	0.0422861	FOXA2_FOXJ3	ENST00000595038.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr8_+_67104323_67104350	0.0407374	FOXA2_FOXJ3	ENST00000518412.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000518035.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000517725.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967
hg19_v2_chr14_-_95624227_95624347	0.0406368	FOXA2_FOXJ3	ENST00000526495.1|DICER1|ENSG00000100697.10|dicer 1, ribonuclease type III
hg19_v2_chr3_+_109128837_109128884	0.0406213	FOXA2_FOXJ3	ENST00000497996.1|RP11-702L6.4|ENSG00000228980.3|RP11-702L6.4
hg19_v2_chr2_-_111334678_111334762	0.040342	FOXA2_FOXJ3	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr20_+_45338126_45338303	0.0402919	FOXA2_FOXJ3	ENST00000359271.2|SLC2A10|ENSG00000197496.4|solute carrier family 2 (facilitated glucose transporter), member 10
hg19_v2_chr4_-_140005443_140005650	0.0398047	FOXA2_FOXJ3	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr12_+_21679220_21679252	0.0397825	FOXA2_FOXJ3	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr16_+_66442411_66442461	0.0390715	FOXA2_FOXJ3	ENST00000499966.1|LINC00920|ENSG00000246898.1|long intergenic non-protein coding RNA 920
hg19_v2_chr15_+_84906338_84906338	0.0380491	FOXA2_FOXJ3	ENST00000512109.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr16_+_28565230_28565257	0.038028	FOXA2_FOXJ3	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr10_-_131762105_131762105	0.0378908	FOXA2_FOXJ3	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr6_+_134758827_134758863	0.0377738	FOXA2_FOXJ3	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr17_+_67410832_67410871	0.0376237	FOXA2_FOXJ3	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr7_-_16840820_16841011	0.037573	FOXA2_FOXJ3	ENST00000450569.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr3_+_119298429_119298454	0.0375536	FOXA2_FOXJ3	ENST00000478927.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr6_+_97372645_97372665	0.0375325	FOXA2_FOXJ3	ENST00000536676.1|KLHL32|ENSG00000186231.12|kelch-like family member 32 	ENST00000544166.1|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr10_+_90672113_90672113	0.0375059	FOXA2_FOXJ3	ENST00000371922.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr5_+_167181917_167181979	0.0375017	FOXA2_FOXJ3	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr2_+_201170999_201171056	0.0373394	FOXA2_FOXJ3	ENST00000439395.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000444012.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr11_+_122709200_122709215	0.0371485	FOXA2_FOXJ3	ENST00000227348.4|CRTAM|ENSG00000109943.4|cytotoxic and regulatory T cell molecule
hg19_v2_chr6_+_74171301_74171493	0.0367513	FOXA2_FOXJ3	ENST00000415954.2|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000498286.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370305.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370300.4|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1
hg19_v2_chr9_+_126131131_126131168	0.0363754	FOXA2_FOXJ3	ENST00000373629.2|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr5_+_167182003_167182014	0.0363164	FOXA2_FOXJ3	ENST00000520394.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr5_-_10308125_10308142	0.0361238	FOXA2_FOXJ3	ENST00000296658.3|CMBL|ENSG00000164237.4|carboxymethylenebutenolidase homolog (Pseudomonas)
hg19_v2_chr12_-_102591604_102591623	0.0361034	FOXA2_FOXJ3	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr4_-_186456766_186456794	0.0359514	FOXA2_FOXJ3	ENST00000284771.6|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr12_+_49297887_49297898	0.0358725	FOXA2_FOXJ3	ENST00000266984.5|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr10_-_46089939_46089980	0.0358042	FOXA2_FOXJ3	ENST00000453980.3|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr1_+_84609944_84609964	0.0357633	FOXA2_FOXJ3	ENST00000370685.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr1_-_89736434_89736546	0.0356167	FOXA2_FOXJ3	ENST00000370459.3|GBP5|ENSG00000154451.10|guanylate binding protein 5
hg19_v2_chr21_+_34602200_34602298	0.0353877	FOXA2_FOXJ3	ENST00000382264.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000382241.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000404220.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000342136.4|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr9_+_80850952_80851267	0.0349906	FOXA2_FOXJ3	ENST00000424347.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000415759.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376597.4|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000277082.5|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376598.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa
hg19_v2_chrX_+_134975753_134975785	0.0344038	FOXA2_FOXJ3	ENST00000535938.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chrX_+_56644819_56644825	0.034162	FOXA2_FOXJ3	ENST00000446028.1|RP11-431N15.2|ENSG00000230105.1|RP11-431N15.2
hg19_v2_chr4_-_111120132_111120167	0.0339708	FOXA2_FOXJ3	ENST00000506625.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr7_+_12250886_12250933	0.0337515	FOXA2_FOXJ3	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr3_+_164924716_164924750	0.0336099	FOXA2_FOXJ3	ENST00000470138.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2	ENST00000498616.1|RP11-85M11.2|ENSG00000244128.1|RP11-85M11.2
hg19_v2_chr2_-_161056802_161056815	0.0332821	FOXA2_FOXJ3	ENST00000283249.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409872.1|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr7_-_30726065_30726065	0.0332217	FOXA2_FOXJ3	ENST00000341843.4|CRHR2|ENSG00000106113.14|corticotropin releasing hormone receptor 2
hg19_v2_chr5_+_159614374_159614397	0.0323441	FOXA2_FOXJ3	ENST00000393980.4|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr6_-_159240415_159240444	0.0321237	FOXA2_FOXJ3	ENST00000367075.3|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr6_+_10528560_10528589	0.0320821	FOXA2_FOXJ3	ENST00000379597.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr9_+_22646189_22646204	0.0319039	FOXA2_FOXJ3	ENST00000436786.1|RP11-399D6.2|ENSG00000234840.1|RP11-399D6.2
hg19_v2_chr1_-_114430169_114430195	0.0312261	FOXA2_FOXJ3	ENST00000393316.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr5_-_153418407_153418503	0.0309028	FOXA2_FOXJ3	ENST00000522858.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522634.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000523705.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000524246.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520313.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000518102.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000351797.4|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520667.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000519808.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522395.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2
hg19_v2_chr1_-_203274418_203274461	0.0308149	FOXA2_FOXJ3	ENST00000457348.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chrX_+_24167828_24167907	0.0303552	FOXA2_FOXJ3	ENST00000379188.3|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000419690.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000379177.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000304543.5|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr2_-_32490859_32490923	0.0301129	FOXA2_FOXJ3	ENST00000404025.2|NLRC4|ENSG00000091106.14|NLR family, CARD domain containing 4
hg19_v2_chr1_+_24646002_24646056	0.0298627	FOXA2_FOXJ3	ENST00000356046.2|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr3_+_119316689_119316710	0.0298515	FOXA2_FOXJ3	ENST00000273371.4|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr2_+_219646462_219646498	0.0296486	FOXA2_FOXJ3	ENST00000258415.4|CYP27A1|ENSG00000135929.4|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v2_chr3_+_157827841_157827916	0.0296187	FOXA2_FOXJ3	ENST00000295930.3|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000471994.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000464171.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000312179.6|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000475278.2|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1
hg19_v2_chr16_+_14980632_14980632	0.0295228	FOXA2_FOXJ3	ENST00000565655.1|NOMO1|ENSG00000103512.10|NODAL modulator 1
hg19_v2_chr19_-_36523709_36523796	0.0289118	FOXA2_FOXJ3	ENST00000592017.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3 	ENST00000360535.4|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chr1_+_207669573_207669606	0.0287205	FOXA2_FOXJ3	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr2_-_172750733_172750762	0.0283753	FOXA2_FOXJ3	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr1_+_3614591_3614622	0.0282823	FOXA2_FOXJ3	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr1_+_207669613_207669686	0.0282351	FOXA2_FOXJ3	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr3_+_98451532_98451572	0.028166	FOXA2_FOXJ3	ENST00000486334.2|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000394162.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr3_-_183145873_183146063	0.0279923	FOXA2_FOXJ3	ENST00000447025.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000414362.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000328913.3|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2
hg19_v2_chr6_+_108882069_108882087	0.0277111	FOXA2_FOXJ3	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr11_-_102651343_102651365	0.0276568	FOXA2_FOXJ3	ENST00000279441.4|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2) 	ENST00000539681.1|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2)
hg19_v2_chr14_+_102606181_102606261	0.0276352	FOXA2_FOXJ3	ENST00000335263.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000322340.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000424963.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000342702.3|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556807.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000499851.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000558567.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000299135.6|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000454394.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556511.2|WDR20|ENSG00000140153.13|WD repeat domain 20
hg19_v2_chr16_+_31128978_31129002	0.0276084	FOXA2_FOXJ3	ENST00000448516.2|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8 	ENST00000219797.4|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8
hg19_v2_chr14_-_75518129_75518235	0.0273461	FOXA2_FOXJ3	ENST00000556257.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000557648.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000553263.1|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000355774.2|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000380968.2|MLH3|ENSG00000119684.11|mutL homolog 3 	ENST00000238662.7|MLH3|ENSG00000119684.11|mutL homolog 3
hg19_v2_chr6_+_97372734_97372760	0.0273278	FOXA2_FOXJ3	ENST00000539200.1|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr5_-_146833222_146833261	0.0270922	FOXA2_FOXJ3	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr16_+_28763108_28763108	0.0268539	FOXA2_FOXJ3	ENST00000357796.3|NPIPB9|ENSG00000196993.4|nuclear pore complex interacting protein family, member B9 	ENST00000550983.1|NPIPB9|ENSG00000196993.4|nuclear pore complex interacting protein family, member B9
hg19_v2_chr8_-_30585439_30585494	0.0267562	FOXA2_FOXJ3	ENST00000221130.5|GSR|ENSG00000104687.8|glutathione reductase
hg19_v2_chr17_-_36003487_36003498	0.0267002	FOXA2_FOXJ3	ENST00000394367.3|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 	ENST00000349699.2|DDX52|ENSG00000141141.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
hg19_v2_chr11_-_34535297_34535317	0.026157	FOXA2_FOXJ3	ENST00000532417.1|ELF5|ENSG00000135374.5|E74-like factor 5 (ets domain transcription factor)
hg19_v2_chr17_-_26662440_26662463	0.0259389	FOXA2_FOXJ3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr3_+_132036243_132036268	0.0258255	FOXA2_FOXJ3	ENST00000475741.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000351273.7|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr17_-_60883993_60884014	0.0256435	FOXA2_FOXJ3	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr3_-_108248169_108248169	0.0255313	FOXA2_FOXJ3	ENST00000273353.3|MYH15|ENSG00000144821.5|myosin, heavy chain 15
hg19_v2_chr2_+_162165038_162165111	0.0250174	FOXA2_FOXJ3	ENST00000437630.1|PSMD14|ENSG00000115233.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
hg19_v2_chr1_+_144811943_144811943	0.0247966	FOXA2_FOXJ3	ENST00000281815.8|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9
hg19_v2_chr16_-_69788816_69788846	0.0246451	FOXA2_FOXJ3	ENST00000268802.5|NOB1|ENSG00000141101.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v2_chr2_-_161056762_161056799	0.0246379	FOXA2_FOXJ3	ENST00000428609.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409967.2|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr18_+_11752783_11752805	0.0245066	FOXA2_FOXJ3	ENST00000585642.1|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr12_+_27175476_27175518	0.0243142	FOXA2_FOXJ3	ENST00000546323.1|MED21|ENSG00000152944.4|mediator complex subunit 21 	ENST00000282892.3|MED21|ENSG00000152944.4|mediator complex subunit 21
hg19_v2_chr14_+_58894706_58894720	0.0242499	FOXA2_FOXJ3	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr3_+_157828152_157828222	0.0239766	FOXA2_FOXJ3	ENST00000476899.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1
hg19_v2_chr8_+_100025476_100025548	0.0239633	FOXA2_FOXJ3	ENST00000355155.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000357162.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000358544.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000395996.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000441350.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast)
hg19_v2_chr17_+_41561317_41561508	0.0238729	FOXA2_FOXJ3	ENST00000540306.1|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8 	ENST00000262415.3|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8 	ENST00000605777.1|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg19_v2_chr19_+_36630454_36630489	0.0237566	FOXA2_FOXJ3	ENST00000246533.3|CAPNS1|ENSG00000126247.6|calpain, small subunit 1
hg19_v2_chr3_-_169487617_169487683	0.0235831	FOXA2_FOXJ3	ENST00000330368.2|ACTRT3|ENSG00000184378.2|actin-related protein T3
hg19_v2_chrX_-_138914394_138914447	0.0235628	FOXA2_FOXJ3	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr19_-_53324884_53324922	0.0233335	FOXA2_FOXJ3	ENST00000457749.2|ZNF28|ENSG00000198538.6|zinc finger protein 28 	ENST00000414252.2|ZNF28|ENSG00000198538.6|zinc finger protein 28 	ENST00000391783.2|ZNF28|ENSG00000198538.6|zinc finger protein 28
hg19_v2_chr22_-_16449805_16449805	0.0232757	FOXA2_FOXJ3	ENST00000252835.4|OR11H1|ENSG00000130538.4|olfactory receptor, family 11, subfamily H, member 1
hg19_v2_chr10_-_69597810_69597827	0.0227592	FOXA2_FOXJ3	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr10_+_62538089_62538244	0.0226786	FOXA2_FOXJ3	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr6_-_29424848_29424848	0.0223629	FOXA2_FOXJ3	ENST00000377149.1|OR11A1|ENSG00000204694.6|olfactory receptor, family 11, subfamily A, member 1
hg19_v2_chr14_-_31926701_31926734	0.0222682	FOXA2_FOXJ3	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr15_-_76352069_76352145	0.0219149	FOXA2_FOXJ3	ENST00000305435.10|NRG4|ENSG00000169752.12|neuregulin 4 	ENST00000563910.1|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr2_+_27886330_27886344	0.0214163	FOXA2_FOXJ3	ENST00000326019.6|SLC4A1AP|ENSG00000163798.9|solute carrier family 4 (anion exchanger), member 1, adaptor protein
hg19_v2_chr6_+_97372596_97372644	0.0213765	FOXA2_FOXJ3	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr3_+_169539710_169539710	0.0213434	FOXA2_FOXJ3	ENST00000340806.6|LRRIQ4|ENSG00000188306.6|leucine-rich repeats and IQ motif containing 4
hg19_v2_chr6_+_26501449_26501449	0.0213245	FOXA2_FOXJ3	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chrX_+_77154935_77155012	0.0210501	FOXA2_FOXJ3	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr13_-_36920420_36920574	0.0209495	FOXA2_FOXJ3	ENST00000438666.2|SPG20|ENSG00000133104.8|spastic paraplegia 20 (Troyer syndrome)
hg19_v2_chr18_-_25616519_25616549	0.0209183	FOXA2_FOXJ3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr3_+_98451275_98451361	0.0206517	FOXA2_FOXJ3	ENST00000265261.6|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000497008.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr6_+_56911336_56911347	0.0204129	FOXA2_FOXJ3	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr5_-_110062384_110062450	0.0200089	FOXA2_FOXJ3	ENST00000429839.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr9_+_127962841_127962855	0.0199639	FOXA2_FOXJ3	ENST00000394124.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr9_+_127054217_127054252	0.0199372	FOXA2_FOXJ3	ENST00000394199.2|NEK6|ENSG00000119408.12|NIMA-related kinase 6 	ENST00000546191.1|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr3_-_100551141_100551158	0.0197909	FOXA2_FOXJ3	ENST00000478235.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000471901.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr12_+_54892550_54892591	0.0195966	FOXA2_FOXJ3	ENST00000545638.2|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr2_+_143635067_143635211	0.0195586	FOXA2_FOXJ3	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr8_+_92221719_92221734	0.0195143	FOXA2_FOXJ3	ENST00000522862.1|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000523719.1|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr10_-_101825151_101825200	0.0190688	FOXA2_FOXJ3	ENST00000441382.1|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr2_+_135809835_135809874	0.0187954	FOXA2_FOXJ3	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr6_-_135818368_135818386	0.0187501	FOXA2_FOXJ3	ENST00000367798.2|AHI1|ENSG00000135541.16|Abelson helper integration site 1
hg19_v2_chr8_-_100025238_100025272	0.0184639	FOXA2_FOXJ3	ENST00000521696.1|RP11-410L14.2|ENSG00000253948.1|RP11-410L14.2
hg19_v2_chr19_+_55417499_55417521	0.0183384	FOXA2_FOXJ3	ENST00000291890.4|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000447255.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000598576.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000594765.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1
hg19_v2_chr1_-_241799232_241799232	0.0183214	FOXA2_FOXJ3	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr9_+_112852477_112852514	0.0183164	FOXA2_FOXJ3	ENST00000480388.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr2_+_115822233_115822249	0.0182511	FOXA2_FOXJ3	ENST00000393146.2|DPP10|ENSG00000175497.12|dipeptidyl-peptidase 10 (non-functional)
hg19_v2_chr14_+_19377522_19377522	0.0182444	FOXA2_FOXJ3	ENST00000550708.1|OR11H12|ENSG00000257115.1|olfactory receptor, family 11, subfamily H, member 12
hg19_v2_chr2_-_220174166_220174370	0.0180169	FOXA2_FOXJ3	ENST00000409251.3|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000451506.1|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000295718.2|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N 	ENST00000446182.1|PTPRN|ENSG00000054356.9|protein tyrosine phosphatase, receptor type, N
hg19_v2_chr19_-_12721616_12721640	0.017904	FOXA2_FOXJ3	ENST00000311437.6|ZNF490|ENSG00000188033.5|zinc finger protein 490
hg19_v2_chr4_+_154622652_154622652	0.0177503	FOXA2_FOXJ3	ENST00000260010.6|TLR2|ENSG00000137462.6|toll-like receptor 2
hg19_v2_chr1_+_174669653_174669663	0.0177416	FOXA2_FOXJ3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr11_-_47447767_47447817	0.017724	FOXA2_FOXJ3	ENST00000530651.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000524447.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000531051.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000526993.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000602866.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr5_+_96212185_96212210	0.0172097	FOXA2_FOXJ3	ENST00000379904.4|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr12_-_58240470_58240522	0.0169518	FOXA2_FOXJ3	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr5_-_19988288_19988330	0.0168458	FOXA2_FOXJ3	ENST00000502796.1|CDH18|ENSG00000145526.7|cadherin 18, type 2 	ENST00000511273.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr1_+_178310581_178310606	0.0167599	FOXA2_FOXJ3	ENST00000462775.1|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr6_+_146350622_146350749	0.0166365	FOXA2_FOXJ3	ENST00000507907.1|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1
hg19_v2_chr21_-_46293644_46293752	0.0165432	FOXA2_FOXJ3	ENST00000330938.3|PTTG1IP|ENSG00000183255.7|pituitary tumor-transforming 1 interacting protein
hg19_v2_chr5_+_140552218_140552244	0.0164419	FOXA2_FOXJ3	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr5_+_166711804_166711843	0.0163521	FOXA2_FOXJ3	ENST00000518659.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2 	ENST00000545108.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr9_+_27109133_27109187	0.016344	FOXA2_FOXJ3	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr9_-_136933615_136933682	0.0159097	FOXA2_FOXJ3	ENST00000371834.2|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr1_+_3607228_3607250	0.0158717	FOXA2_FOXJ3	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr1_+_206579736_206579736	0.0158182	FOXA2_FOXJ3	ENST00000439126.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr22_-_38699003_38699017	0.0156549	FOXA2_FOXJ3	ENST00000451964.1|CSNK1E|ENSG00000213923.6|casein kinase 1, epsilon
hg19_v2_chr3_+_48956249_48956330	0.0154255	FOXA2_FOXJ3	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr3_+_119298280_119298392	0.0152773	FOXA2_FOXJ3	ENST00000481816.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr17_+_7531281_7531320	0.0148547	FOXA2_FOXJ3	ENST00000575729.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000340624.5|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr15_+_64680003_64680063	0.0148533	FOXA2_FOXJ3	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr7_-_76829125_76829143	0.0147849	FOXA2_FOXJ3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr22_-_25170683_25170683	0.0147121	FOXA2_FOXJ3	ENST00000332271.5|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr1_-_186365908_186365908	0.0144526	FOXA2_FOXJ3	ENST00000598663.1|AL596220.1|ENSG00000268662.1|Uncharacterized protein
hg19_v2_chr2_-_202563414_202563426	0.014058	FOXA2_FOXJ3	ENST00000409474.3|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 	ENST00000315506.7|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 	ENST00000359962.5|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
hg19_v2_chr11_+_58695174_58695188	0.0138824	FOXA2_FOXJ3	ENST00000317391.4|GLYATL1|ENSG00000166840.9|glycine-N-acyltransferase-like 1
hg19_v2_chr11_-_72070206_72070250	0.0138685	FOXA2_FOXJ3	ENST00000544382.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr19_+_29493456_29493477	0.013742	FOXA2_FOXJ3	ENST00000591143.1|CTD-2081K17.2|ENSG00000267014.1|CTD-2081K17.2	ENST00000592653.1|CTD-2081K17.2|ENSG00000267014.1|CTD-2081K17.2
hg19_v2_chr9_-_116163400_116163613	0.0137309	FOXA2_FOXJ3	ENST00000277315.5|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000448137.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000409155.3|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr1_-_6420737_6420779	0.0137245	FOXA2_FOXJ3	ENST00000541130.1|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7 	ENST00000377845.3|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr17_-_30185971_30186093	0.0135224	FOXA2_FOXJ3	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr16_+_22516172_22516172	0.0135069	FOXA2_FOXJ3	ENST00000543407.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr14_+_37126765_37126799	0.0127823	FOXA2_FOXJ3	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr20_+_58203664_58203713	0.0127492	FOXA2_FOXJ3	ENST00000541461.1|PHACTR3|ENSG00000087495.12|phosphatase and actin regulator 3
hg19_v2_chr12_+_53836339_53836474	0.0126367	FOXA2_FOXJ3	ENST00000549135.1|PRR13|ENSG00000205352.6|proline rich 13
hg19_v2_chr8_+_27632047_27632080	0.0126018	FOXA2_FOXJ3	ENST00000397418.2|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr4_-_153332886_153333030	0.0122685	FOXA2_FOXJ3	ENST00000603841.1|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr8_-_72459885_72459896	0.0120161	FOXA2_FOXJ3	ENST00000523987.1|RP11-1102P16.1|ENSG00000253379.1|Uncharacterized protein
hg19_v2_chr6_+_101846664_101846702	0.0119989	FOXA2_FOXJ3	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr9_-_37465396_37465454	0.0117238	FOXA2_FOXJ3	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr6_+_152130240_152130274	0.0111487	FOXA2_FOXJ3	ENST00000427531.2|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr1_+_24645865_24645881	0.0110964	FOXA2_FOXJ3	ENST00000342072.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr12_-_92536433_92536459	0.0110603	FOXA2_FOXJ3	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr3_-_189839467_189839520	0.0108636	FOXA2_FOXJ3	ENST00000426003.1|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr5_-_59064458_59064511	0.0108338	FOXA2_FOXJ3	ENST00000502575.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000507116.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr6_+_146350267_146350419	0.0105081	FOXA2_FOXJ3	ENST00000355289.4|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1 	ENST00000282753.1|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1
hg19_v2_chrX_+_54947229_54947284	0.010223	FOXA2_FOXJ3	ENST00000442098.1|TRO|ENSG00000067445.16|trophinin 	ENST00000430420.1|TRO|ENSG00000067445.16|trophinin 	ENST00000453081.1|TRO|ENSG00000067445.16|trophinin 	ENST00000173898.7|TRO|ENSG00000067445.16|trophinin 	ENST00000319167.8|TRO|ENSG00000067445.16|trophinin 	ENST00000375022.4|TRO|ENSG00000067445.16|trophinin 	ENST00000399736.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440072.1|TRO|ENSG00000067445.16|trophinin 	ENST00000420798.2|TRO|ENSG00000067445.16|trophinin 	ENST00000431115.1|TRO|ENSG00000067445.16|trophinin 	ENST00000440759.1|TRO|ENSG00000067445.16|trophinin 	ENST00000375041.2|TRO|ENSG00000067445.16|trophinin
hg19_v2_chr3_-_189838670_189838718	0.0101082	FOXA2_FOXJ3	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr3_-_157221128_157221216	0.00974821	FOXA2_FOXJ3	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr6_-_88038996_88038996	0.00968768	FOXA2_FOXJ3	ENST00000525899.1|GJB7|ENSG00000164411.6|gap junction protein, beta 7, 25kDa
hg19_v2_chr2_+_120770645_120770669	0.00928284	FOXA2_FOXJ3	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr3_+_119316721_119316739	0.00920231	FOXA2_FOXJ3	ENST00000488919.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A 	ENST00000495992.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr4_+_110769258_110769358	0.00916197	FOXA2_FOXJ3	ENST00000594814.1|LRIT3|ENSG00000183423.7|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
hg19_v2_chr5_+_153418466_153418565	0.00882788	FOXA2_FOXJ3	ENST00000522782.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000439768.2|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000436816.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000322602.5|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000522177.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000520899.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3
hg19_v2_chr5_-_19988339_19988358	0.00854346	FOXA2_FOXJ3	ENST00000382275.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr11_+_65101225_65101359	0.0076652	FOXA2_FOXJ3	ENST00000528416.1|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000415073.2|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000252268.4|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2
hg19_v2_chr1_+_161123536_161123588	0.00762807	FOXA2_FOXJ3	ENST00000368003.5|UFC1|ENSG00000143222.7|ubiquitin-fold modifier conjugating enzyme 1
hg19_v2_chr6_-_109330702_109330763	0.0075727	FOXA2_FOXJ3	ENST00000356644.7|SESN1|ENSG00000080546.9|sestrin 1
hg19_v2_chr2_+_210517895_210518021	0.00756499	FOXA2_FOXJ3	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr20_-_30311703_30311792	0.00748619	FOXA2_FOXJ3	ENST00000450273.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000456404.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420488.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000439267.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr9_+_120466610_120466628	0.00704604	FOXA2_FOXJ3	ENST00000394487.4|TLR4|ENSG00000136869.13|toll-like receptor 4
hg19_v2_chr1_-_177939041_177939053	0.0069144	FOXA2_FOXJ3	ENST00000308284.6|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr9_+_27109392_27109435	0.00676913	FOXA2_FOXJ3	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr2_+_143635222_143635240	0.0064018	FOXA2_FOXJ3	ENST00000375773.2|KYNU|ENSG00000115919.10|kynureninase 	ENST00000409512.1|KYNU|ENSG00000115919.10|kynureninase 	ENST00000410015.2|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chrX_-_50557302_50557316	0.00631741	FOXA2_FOXJ3	ENST00000289292.7|SHROOM4|ENSG00000158352.11|shroom family member 4
hg19_v2_chr10_-_69597915_69597926	0.00617166	FOXA2_FOXJ3	ENST00000225171.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr19_-_5978090_5978129	0.00612245	FOXA2_FOXJ3	ENST00000592621.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000034275.8|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591092.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591333.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000590623.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000439268.2|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000587159.1|RANBP3|ENSG00000031823.10|RAN binding protein 3
hg19_v2_chr3_+_128968437_128968505	0.00593573	FOXA2_FOXJ3	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chr14_-_90798273_90798323	0.00590073	FOXA2_FOXJ3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr20_+_36373032_36373047	0.00554453	FOXA2_FOXJ3	ENST00000373473.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr2_+_66918558_66918580	0.00531939	FOXA2_FOXJ3	ENST00000435389.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000428590.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000412944.1|AC007392.3|ENSG00000232046.2|AC007392.3
hg19_v2_chr16_+_56969284_56969314	0.0050325	FOXA2_FOXJ3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr3_+_50712672_50712703	0.00454007	FOXA2_FOXJ3	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr9_+_120466650_120466659	0.00389279	FOXA2_FOXJ3	ENST00000355622.6|TLR4|ENSG00000136869.13|toll-like receptor 4
hg19_v2_chr16_+_27078219_27078229	0.00356628	FOXA2_FOXJ3	ENST00000418886.1|C16orf82|ENSG00000234186.2|chromosome 16 open reading frame 82
hg19_v2_chr9_+_131683174_131683282	0.00281743	FOXA2_FOXJ3	ENST00000372592.3|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1 	ENST00000428610.1|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1
hg19_v2_chr13_+_78315295_78315337	0.00279434	FOXA2_FOXJ3	ENST00000351546.3|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr1_+_15764931_15764945	0.00263645	FOXA2_FOXJ3	ENST00000375949.4|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin) 	ENST00000375943.2|CTRC|ENSG00000162438.7|chymotrypsin C (caldecrin)
hg19_v2_chr21_-_16125773_16125787	0.00244965	FOXA2_FOXJ3	ENST00000454128.2|AF127936.3|ENSG00000232884.3|AF127936.3
hg19_v2_chr17_-_29641104_29641130	0.00232138	FOXA2_FOXJ3	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr14_+_88851874_88852056	0.00129671	FOXA2_FOXJ3	ENST00000393545.4|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000356583.5|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000555401.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000553885.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7
hg19_v2_chr5_+_162932554_162932661	0.000432844	FOXA2_FOXJ3	ENST00000321757.6|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000421814.2|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000518095.1|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr2_+_210518057_210518117	0.000431844	FOXA2_FOXJ3	ENST00000452717.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr17_-_6915646_6915673	0.000325278	FOXA2_FOXJ3	ENST00000574377.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399541.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399540.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000575727.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000573939.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein
hg19_v2_chr1_+_160709076_160709094	0.000192086	FOXA2_FOXJ3	ENST00000359331.4|SLAMF7|ENSG00000026751.12|SLAM family member 7 	ENST00000495334.1|SLAMF7|ENSG00000026751.12|SLAM family member 7
