hg19_v2_chr17_-_78009647_78009681	0.229909	CUGGCUG	ENST00000310924.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr3_+_50606577_50606628	0.220201	CUGGCUG	ENST00000434410.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1 	ENST00000232854.4|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr17_-_4607335_4607448	0.171474	CUGGCUG	ENST00000570571.1|PELP1|ENSG00000141456.10|proline, glutamate and leucine rich protein 1 	ENST00000575101.1|PELP1|ENSG00000141456.10|proline, glutamate and leucine rich protein 1 	ENST00000436683.2|PELP1|ENSG00000141456.10|proline, glutamate and leucine rich protein 1 	ENST00000574876.1|PELP1|ENSG00000141456.10|proline, glutamate and leucine rich protein 1
hg19_v2_chr8_+_21946681_21946720	0.161772	CUGGCUG	ENST00000289921.7|FAM160B2|ENSG00000158863.17|family with sequence similarity 160, member B2
hg19_v2_chr11_-_67236691_67236748	0.153799	CUGGCUG	ENST00000544903.1|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000308022.2|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000393877.3|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000452789.2|TMEM134|ENSG00000172663.4|transmembrane protein 134
hg19_v2_chr11_-_72504637_72504680	0.152236	CUGGCUG	ENST00000536377.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10 	ENST00000359373.5|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr15_+_76030311_76030311	0.145782	CUGGCUG	ENST00000543887.1|AC019294.1|ENSG00000256530.1|AC019294.1
hg19_v2_chr19_+_34287751_34287807	0.132674	CUGGCUG	ENST00000590771.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000589786.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000284006.6|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000588881.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15
hg19_v2_chr1_-_1677358_1677512	0.122012	CUGGCUG	ENST00000355439.2|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2 	ENST00000400924.1|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2 	ENST00000246421.4|SLC35E2|ENSG00000215790.2|solute carrier family 35, member E2
hg19_v2_chr12_-_54673871_54673925	0.119831	CUGGCUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr1_+_36348790_36348822	0.116941	CUGGCUG	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr9_+_129376722_129376748	0.115753	CUGGCUG	ENST00000526117.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000373474.4|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000355497.5|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000425646.2|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000561065.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta
hg19_v2_chr15_+_75498355_75498390	0.114882	CUGGCUG	ENST00000567617.1|C15orf39|ENSG00000167173.14|chromosome 15 open reading frame 39
hg19_v2_chr1_+_110453203_110453255	0.110499	CUGGCUG	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr19_+_41816053_41816178	0.106234	CUGGCUG	ENST00000269967.3|CCDC97|ENSG00000142039.3|coiled-coil domain containing 97
hg19_v2_chr14_+_23067146_23067160	0.106172	CUGGCUG	ENST00000428304.2|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr2_-_166930131_166930149	0.105652	CUGGCUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr1_-_1624083_1624167	0.104525	CUGGCUG	ENST00000378662.1|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B 	ENST00000234800.6|SLC35E2B|ENSG00000189339.7|solute carrier family 35, member E2B
hg19_v2_chr11_+_66610883_66610931	0.104335	CUGGCUG	ENST00000309657.3|RCE1|ENSG00000173653.3|Ras converting CAAX endopeptidase 1 	ENST00000524506.1|RCE1|ENSG00000173653.3|Ras converting CAAX endopeptidase 1
hg19_v2_chr5_+_149887672_149887698	0.103984	CUGGCUG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr19_+_13135386_13135435	0.103109	CUGGCUG	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr19_-_36391434_36391564	0.101498	CUGGCUG	ENST00000396901.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta 	ENST00000585925.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
hg19_v2_chr22_-_38669030_38669045	0.101094	CUGGCUG	ENST00000361906.3|TMEM184B|ENSG00000198792.8|transmembrane protein 184B
hg19_v2_chr12_-_58027138_58027159	0.100648	CUGGCUG	ENST00000341156.4|B4GALNT1|ENSG00000135454.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
hg19_v2_chr9_+_116917807_116917840	0.100234	CUGGCUG	ENST00000356083.3|COL27A1|ENSG00000196739.10|collagen, type XXVII, alpha 1
hg19_v2_chrX_+_46433193_46433237	0.100124	CUGGCUG	ENST00000276055.3|CHST7|ENSG00000147119.3|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
hg19_v2_chr14_+_65171099_65171210	0.100117	CUGGCUG	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr19_-_15560730_15560772	0.0972702	CUGGCUG	ENST00000389282.4|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs 	ENST00000263381.7|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr12_-_49449107_49449107	0.0965981	CUGGCUG	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr8_+_37887772_37887859	0.0954217	CUGGCUG	ENST00000338825.4|EIF4EBP1|ENSG00000187840.4|eukaryotic translation initiation factor 4E binding protein 1
hg19_v2_chr20_+_306221_306239	0.0949058	CUGGCUG	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr2_-_85829811_85829828	0.0911095	CUGGCUG	ENST00000306353.3|TMEM150A|ENSG00000168890.9|transmembrane protein 150A
hg19_v2_chr6_-_33756867_33756950	0.0865525	CUGGCUG	ENST00000293760.5|LEMD2|ENSG00000161904.7|LEM domain containing 2
hg19_v2_chr3_-_48700310_48700348	0.0861039	CUGGCUG	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr19_-_14316980_14316999	0.0849974	CUGGCUG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr8_+_145743360_145743401	0.0844038	CUGGCUG	ENST00000527730.1|LRRC14|ENSG00000160959.3|leucine rich repeat containing 14 	ENST00000529022.1|LRRC14|ENSG00000160959.3|leucine rich repeat containing 14 	ENST00000292524.1|LRRC14|ENSG00000160959.3|leucine rich repeat containing 14
hg19_v2_chr19_-_913160_913240	0.0837695	CUGGCUG	ENST00000361574.5|R3HDM4|ENSG00000198858.5|R3H domain containing 4 	ENST00000587975.1|R3HDM4|ENSG00000198858.5|R3H domain containing 4
hg19_v2_chr22_+_38597889_38598021	0.0825356	CUGGCUG	ENST00000338483.2|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000538320.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000538999.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000441709.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
hg19_v2_chr12_-_56652111_56652183	0.0821052	CUGGCUG	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr1_-_17766198_17766232	0.0809115	CUGGCUG	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr6_+_42981922_42982047	0.0807391	CUGGCUG	ENST00000326974.4|KLHDC3|ENSG00000124702.13|kelch domain containing 3 	ENST00000244670.8|KLHDC3|ENSG00000124702.13|kelch domain containing 3
hg19_v2_chr7_-_5463175_5463195	0.0801373	CUGGCUG	ENST00000399537.4|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18 	ENST00000430969.1|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18
hg19_v2_chr11_+_118477144_118477156	0.0800485	CUGGCUG	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr3_+_9834227_9834260	0.0786881	CUGGCUG	ENST00000287613.7|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa 	ENST00000397261.3|ARPC4|ENSG00000241553.8|actin related protein 2/3 complex, subunit 4, 20kDa
hg19_v2_chrX_+_49687216_49687265	0.0782739	CUGGCUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr8_-_81787006_81787031	0.0773695	CUGGCUG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr11_-_64684672_64684722	0.0765903	CUGGCUG	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr11_+_45868957_45869044	0.0740246	CUGGCUG	ENST00000443527.2|CRY2|ENSG00000121671.7|cryptochrome 2 (photolyase-like)
hg19_v2_chr11_+_63706444_63706486	0.072703	CUGGCUG	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr5_+_175223313_175223349	0.0717495	CUGGCUG	ENST00000359546.4|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chr22_-_19435755_19435775	0.0710066	CUGGCUG	ENST00000542103.1|C22orf39|ENSG00000242259.4|chromosome 22 open reading frame 39 	ENST00000399562.4|C22orf39|ENSG00000242259.4|chromosome 22 open reading frame 39
hg19_v2_chr9_-_35619539_35619544	0.070325	CUGGCUG	ENST00000396757.1|CD72|ENSG00000137101.8|CD72 molecule
hg19_v2_chr19_+_11466062_11466159	0.0692559	CUGGCUG	ENST00000251473.5|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000591329.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2  	ENST00000586380.1|DKFZP761J1410|ENSG00000105520.6|Lipid phosphate phosphatase-related protein type 2
hg19_v2_chr14_-_77787198_77787244	0.0691307	CUGGCUG	ENST00000261534.4|POMT2|ENSG00000009830.7|protein-O-mannosyltransferase 2
hg19_v2_chr20_+_33814457_33814506	0.068879	CUGGCUG	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr6_+_37321748_37321819	0.0680453	CUGGCUG	ENST00000373479.4|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase 	ENST00000394443.4|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase
hg19_v2_chr8_-_119124045_119124097	0.0670106	CUGGCUG	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr10_-_106098162_106098181	0.0661023	CUGGCUG	ENST00000337478.1|ITPRIP|ENSG00000148841.11|inositol 1,4,5-trisphosphate receptor interacting protein
hg19_v2_chr6_-_33547975_33547999	0.0649446	CUGGCUG	ENST00000442998.2|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1 	ENST00000360661.5|BAK1|ENSG00000030110.8|BCL2-antagonist/killer 1
hg19_v2_chr5_+_133861790_133861829	0.0644482	CUGGCUG	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr1_+_32645269_32645292	0.0632325	CUGGCUG	ENST00000373610.3|TXLNA|ENSG00000084652.11|taxilin alpha
hg19_v2_chr17_+_35294075_35294102	0.062696	CUGGCUG	ENST00000254457.5|LHX1|ENSG00000132130.7|LIM homeobox 1
hg19_v2_chr17_-_1928621_1928641	0.0606849	CUGGCUG	ENST00000331238.6|RTN4RL1|ENSG00000185924.6|reticulon 4 receptor-like 1
hg19_v2_chr16_+_31085714_31085783	0.0595485	CUGGCUG	ENST00000300850.5|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000564189.1|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000428260.1|ZNF646|ENSG00000167395.10|zinc finger protein 646
hg19_v2_chr15_-_86338134_86338261	0.0563662	CUGGCUG	ENST00000337975.5|KLHL25|ENSG00000183655.11|kelch-like family member 25
hg19_v2_chr19_+_3359561_3359681	0.0562023	CUGGCUG	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr16_-_11036300_11036342	0.0555049	CUGGCUG	ENST00000331808.4|DEXI|ENSG00000182108.5|Dexi homolog (mouse)
hg19_v2_chr12_-_58135903_58135974	0.055183	CUGGCUG	ENST00000257897.3|AGAP2|ENSG00000135439.7|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
hg19_v2_chr11_+_119205222_119205247	0.0542498	CUGGCUG	ENST00000311413.4|RNF26|ENSG00000173456.4|ring finger protein 26
hg19_v2_chr14_+_23775971_23776000	0.0521248	CUGGCUG	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr14_+_70078303_70078321	0.0516561	CUGGCUG	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr17_-_7382834_7382855	0.0507657	CUGGCUG	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr3_-_133614597_133614681	0.0507331	CUGGCUG	ENST00000285208.4|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family 	ENST00000460865.3|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family
hg19_v2_chr8_-_141645645_141645783	0.0503666	CUGGCUG	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr1_-_26633067_26633145	0.0499021	CUGGCUG	ENST00000421827.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374215.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374223.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000357089.4|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000535108.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000314675.7|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000436301.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000423664.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374221.3|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chr22_+_42229100_42229146	0.0495351	CUGGCUG	ENST00000361204.4|SREBF2|ENSG00000198911.7|sterol regulatory element binding transcription factor 2
hg19_v2_chr12_-_498620_498693	0.0492794	CUGGCUG	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr20_+_35974532_35974557	0.0486529	CUGGCUG	ENST00000373578.2|SRC|ENSG00000197122.7|v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
hg19_v2_chrX_-_107681633_107681692	0.0485682	CUGGCUG	ENST00000394872.2|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6 	ENST00000334504.7|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr3_-_112360116_112360153	0.0483373	CUGGCUG	ENST00000206423.3|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80 	ENST00000439685.2|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr8_-_145013711_145013786	0.0482543	CUGGCUG	ENST00000345136.3|PLEC|ENSG00000178209.10|plectin
hg19_v2_chr1_+_27561007_27561061	0.0473124	CUGGCUG	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr22_-_39239987_39240041	0.0470172	CUGGCUG	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chr12_-_92539614_92539673	0.0469126	CUGGCUG	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr20_+_34824355_34824408	0.0468118	CUGGCUG	ENST00000397286.3|AAR2|ENSG00000131043.7|AAR2 splicing factor homolog (S. cerevisiae) 	ENST00000320849.4|AAR2|ENSG00000131043.7|AAR2 splicing factor homolog (S. cerevisiae) 	ENST00000373932.3|AAR2|ENSG00000131043.7|AAR2 splicing factor homolog (S. cerevisiae)
hg19_v2_chr17_-_17875688_17875736	0.0467701	CUGGCUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr17_-_38721711_38721730	0.0458289	CUGGCUG	ENST00000578085.1|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7 	ENST00000246657.2|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7
hg19_v2_chr10_-_81965307_81965351	0.0458134	CUGGCUG	ENST00000537102.1|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000372231.3|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000438331.1|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000422982.3|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000360615.4|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000265447.4|ANXA11|ENSG00000122359.13|annexin A11
hg19_v2_chr3_-_128840604_128840993	0.045153	CUGGCUG	ENST00000476465.1|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family 	ENST00000315150.5|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family 	ENST00000393304.1|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family 	ENST00000393308.1|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family 	ENST00000393307.1|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family 	ENST00000393305.1|RAB43|ENSG00000172780.12|RAB43, member RAS oncogene family
hg19_v2_chr20_+_32581452_32581520	0.0445278	CUGGCUG	ENST00000375114.3|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein 	ENST00000448364.1|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein
hg19_v2_chr19_-_14201507_14201588	0.0439398	CUGGCUG	ENST00000533683.2|SAMD1|ENSG00000141858.7|sterile alpha motif domain containing 1
hg19_v2_chr14_+_105714910_105715115	0.0434761	CUGGCUG	ENST00000392554.3|BTBD6|ENSG00000184887.9|BTB (POZ) domain containing 6 	ENST00000463376.2|BTBD6|ENSG00000184887.9|BTB (POZ) domain containing 6 	ENST00000327471.3|BTBD6|ENSG00000184887.9|BTB (POZ) domain containing 6
hg19_v2_chr1_+_11333245_11333290	0.0432687	CUGGCUG	ENST00000376810.5|UBIAD1|ENSG00000120942.9|UbiA prenyltransferase domain containing 1
hg19_v2_chr1_+_154300217_154300276	0.0431611	CUGGCUG	ENST00000368489.3|ATP8B2|ENSG00000143515.12|ATPase, aminophospholipid transporter, class I, type 8B, member 2
hg19_v2_chr3_-_39195037_39195069	0.042393	CUGGCUG	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr16_-_17564738_17564834	0.0423765	CUGGCUG	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr17_-_18266797_18266817	0.0422917	CUGGCUG	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr9_-_132404374_132404450	0.0421514	CUGGCUG	ENST00000277459.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000450050.2|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000277458.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6
hg19_v2_chr19_-_55881741_55881837	0.042017	CUGGCUG	ENST00000264563.2|IL11|ENSG00000095752.2|interleukin 11 	ENST00000590625.1|IL11|ENSG00000095752.2|interleukin 11 	ENST00000585513.1|IL11|ENSG00000095752.2|interleukin 11
hg19_v2_chr11_-_73309228_73309257	0.0419028	CUGGCUG	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr17_-_27893990_27894155	0.0416129	CUGGCUG	ENST00000307201.4|ABHD15|ENSG00000168792.4|abhydrolase domain containing 15
hg19_v2_chr4_+_77356248_77356295	0.040114	CUGGCUG	ENST00000296043.6|SHROOM3|ENSG00000138771.10|shroom family member 3
hg19_v2_chr20_+_36149602_36149665	0.039135	CUGGCUG	ENST00000062104.2|NNAT|ENSG00000053438.7|neuronatin 	ENST00000346199.2|NNAT|ENSG00000053438.7|neuronatin
hg19_v2_chr17_+_61699766_61699826	0.0389556	CUGGCUG	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr7_-_106301405_106301484	0.0387872	CUGGCUG	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chr20_+_33292068_33292164	0.0384268	CUGGCUG	ENST00000374810.3|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000374809.2|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000451665.1|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2
hg19_v2_chr17_-_48207157_48207246	0.0382238	CUGGCUG	ENST00000330175.4|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14 	ENST00000503131.1|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14
hg19_v2_chr1_-_153931052_153931124	0.0378377	CUGGCUG	ENST00000368630.3|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2 	ENST00000368633.1|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2
hg19_v2_chr2_+_25015968_25016029	0.037823	CUGGCUG	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr17_-_18908040_18908117	0.0367029	CUGGCUG	ENST00000388995.6|FAM83G|ENSG00000188522.10|family with sequence similarity 83, member G
hg19_v2_chrX_+_9431324_9431371	0.0365652	CUGGCUG	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr15_+_67358163_67358192	0.036037	CUGGCUG	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr16_+_16043406_16043434	0.0349257	CUGGCUG	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr16_-_66730583_66730689	0.0343102	CUGGCUG	ENST00000330687.4|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000394106.2|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000563952.1|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4
hg19_v2_chr9_+_124413873_124413969	0.0340409	CUGGCUG	ENST00000408936.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr6_-_44281043_44281091	0.034031	CUGGCUG	ENST00000244571.4|AARS2|ENSG00000124608.4|alanyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr22_+_39795746_39795811	0.0339894	CUGGCUG	ENST00000216160.6|TAB1|ENSG00000100324.9|TGF-beta activated kinase 1/MAP3K7 binding protein 1 	ENST00000331454.3|TAB1|ENSG00000100324.9|TGF-beta activated kinase 1/MAP3K7 binding protein 1
hg19_v2_chr2_+_30454390_30454409	0.0335687	CUGGCUG	ENST00000395323.3|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000406087.1|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000404397.1|LBH|ENSG00000213626.7|limb bud and heart development
hg19_v2_chr1_+_210501589_210501609	0.0333961	CUGGCUG	ENST00000413764.2|HHAT|ENSG00000054392.8|hedgehog acyltransferase 	ENST00000541565.1|HHAT|ENSG00000054392.8|hedgehog acyltransferase
hg19_v2_chr2_+_73114489_73114561	0.0328755	CUGGCUG	ENST00000234454.5|SPR|ENSG00000116096.5|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg19_v2_chr2_+_131113580_131113604	0.0328342	CUGGCUG	ENST00000175756.5|PTPN18|ENSG00000072135.8|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)
hg19_v2_chr17_+_38375574_38375615	0.0326357	CUGGCUG	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr10_-_70287231_70287290	0.0313632	CUGGCUG	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr1_+_16693578_16693760	0.0311047	CUGGCUG	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr10_+_102295616_102295713	0.030972	CUGGCUG	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr17_-_27916621_27916680	0.030168	CUGGCUG	ENST00000225394.3|GIT1|ENSG00000108262.11|G protein-coupled receptor kinase interacting ArfGAP 1
hg19_v2_chr22_+_20748405_20748455	0.0295193	CUGGCUG	ENST00000400451.2|ZNF74|ENSG00000185252.13|zinc finger protein 74 	ENST00000403682.3|ZNF74|ENSG00000185252.13|zinc finger protein 74 	ENST00000357502.5|ZNF74|ENSG00000185252.13|zinc finger protein 74
hg19_v2_chr2_+_68384976_68385005	0.0292507	CUGGCUG	ENST00000263657.2|PNO1|ENSG00000115946.3|partner of NOB1 homolog (S. cerevisiae)
hg19_v2_chr20_+_34700333_34700348	0.0286731	CUGGCUG	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr7_-_99036270_99036539	0.0286649	CUGGCUG	ENST00000430029.1|PTCD1|ENSG00000106246.13|pentatricopeptide repeat domain 1 	ENST00000419981.1|PTCD1|ENSG00000106246.13|pentatricopeptide repeat domain 1 	ENST00000292478.4|PTCD1|ENSG00000106246.13|pentatricopeptide repeat domain 1
hg19_v2_chr2_+_134877740_134877762	0.0286018	CUGGCUG	ENST00000409645.1|MGAT5|ENSG00000152127.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
hg19_v2_chr1_+_46972668_46972669	0.0282338	CUGGCUG	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr21_-_43346790_43346823	0.0279695	CUGGCUG	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr2_+_27193480_27193548	0.0276996	CUGGCUG	ENST00000233121.2|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3 	ENST00000405074.3|MAPRE3|ENSG00000084764.6|microtubule-associated protein, RP/EB family, member 3
hg19_v2_chr9_-_91793675_91793698	0.0266559	CUGGCUG	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chr8_+_35649365_35649365	0.0266006	CUGGCUG	ENST00000437887.1|AC012215.1|ENSG00000233863.1|Uncharacterized protein
hg19_v2_chr7_+_140774032_140774032	0.0265078	CUGGCUG	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr1_-_57045228_57045242	0.0260455	CUGGCUG	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr22_-_39096661_39096681	0.0257286	CUGGCUG	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chrX_+_152953505_152953554	0.0252828	CUGGCUG	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chrX_+_70752917_70752933	0.0251557	CUGGCUG	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr1_+_180199393_180199426	0.0243793	CUGGCUG	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr7_+_30323923_30324060	0.0240799	CUGGCUG	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr17_-_1420182_1420279	0.0239812	CUGGCUG	ENST00000421807.2|INPP5K|ENSG00000132376.15|inositol polyphosphate-5-phosphatase K
hg19_v2_chr22_-_43010928_43010968	0.0237518	CUGGCUG	ENST00000348657.2|POLDIP3|ENSG00000100227.13|polymerase (DNA-directed), delta interacting protein 3 	ENST00000252115.5|POLDIP3|ENSG00000100227.13|polymerase (DNA-directed), delta interacting protein 3
hg19_v2_chr5_-_178017355_178017556	0.0233909	CUGGCUG	ENST00000390654.3|COL23A1|ENSG00000050767.11|collagen, type XXIII, alpha 1
hg19_v2_chr12_-_57400227_57400245	0.0222272	CUGGCUG	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr11_+_71640071_71640109	0.0220418	CUGGCUG	ENST00000533380.1|RNF121|ENSG00000137522.13|ring finger protein 121 	ENST00000393713.3|RNF121|ENSG00000137522.13|ring finger protein 121 	ENST00000545854.1|RNF121|ENSG00000137522.13|ring finger protein 121
hg19_v2_chr3_-_128879875_128879937	0.0212517	CUGGCUG	ENST00000418265.1|ISY1-RAB43|ENSG00000261796.1|ISY1-RAB43 readthrough 	ENST00000393292.3|ISY1|ENSG00000240682.5|ISY1 splicing factor homolog (S. cerevisiae) 	ENST00000273541.8|ISY1|ENSG00000240682.5|ISY1 splicing factor homolog (S. cerevisiae)
hg19_v2_chr17_+_55333876_55333939	0.0211132	CUGGCUG	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr6_-_52441713_52441784	0.0209579	CUGGCUG	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr6_+_36164487_36164559	0.0206045	CUGGCUG	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr19_+_16296191_16296266	0.0205225	CUGGCUG	ENST00000589852.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000263384.7|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000588367.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000587351.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A
hg19_v2_chr9_+_77112244_77112281	0.0202908	CUGGCUG	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr20_+_30795664_30795743	0.0202729	CUGGCUG	ENST00000375749.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000375730.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000539210.1|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1
hg19_v2_chr15_-_61521495_61521518	0.0202532	CUGGCUG	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr7_+_23338819_23338973	0.0201637	CUGGCUG	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr6_-_138428613_138428648	0.0198194	CUGGCUG	ENST00000421351.3|PERP|ENSG00000112378.11|PERP, TP53 apoptosis effector
hg19_v2_chr3_+_196594727_196594816	0.0189734	CUGGCUG	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr20_-_1472029_1472042	0.0186714	CUGGCUG	ENST00000359801.3|SIRPB2|ENSG00000196209.8|signal-regulatory protein beta 2
hg19_v2_chr1_+_33546714_33546769	0.018214	CUGGCUG	ENST00000294517.6|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000358680.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000373443.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000398167.1|ADC|ENSG00000142920.12|arginine decarboxylase
hg19_v2_chr12_-_56727487_56727533	0.0181191	CUGGCUG	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr17_+_29718642_29718656	0.0179318	CUGGCUG	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr14_-_39901618_39901704	0.0178579	CUGGCUG	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr3_-_12200851_12200885	0.017314	CUGGCUG	ENST00000287814.4|TIMP4|ENSG00000157150.4|TIMP metallopeptidase inhibitor 4
hg19_v2_chr7_+_100797678_100797708	0.0171657	CUGGCUG	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr1_+_160175117_160175136	0.0168331	CUGGCUG	ENST00000360472.4|PEA15|ENSG00000162734.8|phosphoprotein enriched in astrocytes 15
hg19_v2_chr20_+_3451650_3451729	0.0168038	CUGGCUG	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr7_+_34697973_34698021	0.0165564	CUGGCUG	ENST00000381539.3|NPSR1|ENSG00000187258.9|neuropeptide S receptor 1
hg19_v2_chr11_+_72929319_72929344	0.0161563	CUGGCUG	ENST00000393597.2|P2RY2|ENSG00000175591.7|purinergic receptor P2Y, G-protein coupled, 2 	ENST00000311131.2|P2RY2|ENSG00000175591.7|purinergic receptor P2Y, G-protein coupled, 2
hg19_v2_chr6_+_37787262_37787291	0.0161284	CUGGCUG	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr19_+_34745442_34745502	0.015209	CUGGCUG	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr11_-_115375107_115375283	0.0147966	CUGGCUG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr2_-_208030647_208030689	0.014622	CUGGCUG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr14_-_47812321_47812438	0.0145279	CUGGCUG	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr14_-_75179774_75179818	0.0140572	CUGGCUG	ENST00000555249.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000556202.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000338772.5|AC007956.1|ENSG00000214670.3|Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein  	ENST00000356357.4|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1
hg19_v2_chr15_+_92937058_92937133	0.0138467	CUGGCUG	ENST00000268164.3|ST8SIA2|ENSG00000140557.7|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
hg19_v2_chr1_+_150122034_150122170	0.0135883	CUGGCUG	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr20_-_48099182_48099214	0.012318	CUGGCUG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr11_+_126173647_126173647	0.0121865	CUGGCUG	ENST00000263579.4|DCPS|ENSG00000110063.4|decapping enzyme, scavenger
hg19_v2_chr8_+_143530791_143530825	0.0119788	CUGGCUG	ENST00000517894.1|BAI1|ENSG00000181790.6|brain-specific angiogenesis inhibitor 1
hg19_v2_chr17_-_36956155_36956223	0.0114456	CUGGCUG	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chrX_+_47004639_47004685	0.0106239	CUGGCUG	ENST00000345781.6|RBM10|ENSG00000182872.11|RNA binding motif protein 10
hg19_v2_chr18_+_54318616_54318640	0.0101267	CUGGCUG	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr5_+_177540444_177540506	0.0098851	CUGGCUG	ENST00000274605.5|N4BP3|ENSG00000145911.5|NEDD4 binding protein 3
hg19_v2_chr12_-_59313270_59313327	0.00959898	CUGGCUG	ENST00000379141.4|LRIG3|ENSG00000139263.7|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v2_chr17_+_36508111_36508128	0.0091433	CUGGCUG	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr7_+_66386204_66386249	0.0083959	CUGGCUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr3_+_187930719_187930729	0.00813876	CUGGCUG	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr19_+_19496624_19496660	0.00811285	CUGGCUG	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr17_-_617949_618107	0.00803218	CUGGCUG	ENST00000401468.3|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000574029.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000291074.5|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000571805.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000437048.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000446250.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae)
hg19_v2_chr19_+_13056663_13056706	0.00800469	CUGGCUG	ENST00000541222.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000316856.3|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000586534.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000592268.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae)
hg19_v2_chr2_-_97405775_97405816	0.00770698	CUGGCUG	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr17_-_33775760_33775856	0.00768926	CUGGCUG	ENST00000534689.1|SLFN13|ENSG00000154760.9|schlafen family member 13 	ENST00000532210.1|SLFN13|ENSG00000154760.9|schlafen family member 13 	ENST00000526861.1|SLFN13|ENSG00000154760.9|schlafen family member 13 	ENST00000531588.1|SLFN13|ENSG00000154760.9|schlafen family member 13 	ENST00000285013.6|SLFN13|ENSG00000154760.9|schlafen family member 13
hg19_v2_chrX_+_47077632_47077679	0.00706084	CUGGCUG	ENST00000457458.2|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16
hg19_v2_chr9_-_37034028_37034157	0.00676117	CUGGCUG	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr4_-_987217_987231	0.00664046	CUGGCUG	ENST00000361661.2|SLC26A1|ENSG00000145217.9|solute carrier family 26 (anion exchanger), member 1 	ENST00000398516.2|SLC26A1|ENSG00000145217.9|solute carrier family 26 (anion exchanger), member 1
hg19_v2_chr10_-_120514720_120514758	0.00601564	CUGGCUG	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr14_+_55034599_55034637	0.00590774	CUGGCUG	ENST00000392067.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A 	ENST00000357634.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A
hg19_v2_chr8_-_139926236_139926269	0.00518678	CUGGCUG	ENST00000303045.6|COL22A1|ENSG00000169436.12|collagen, type XXII, alpha 1 	ENST00000435777.1|COL22A1|ENSG00000169436.12|collagen, type XXII, alpha 1
hg19_v2_chr1_+_15943995_15944014	0.00508124	CUGGCUG	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr16_+_68298405_68298463	0.0050765	CUGGCUG	ENST00000219343.6|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566834.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566454.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
hg19_v2_chr12_-_9102549_9102591	0.00490138	CUGGCUG	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr8_-_98290087_98290197	0.00472969	CUGGCUG	ENST00000322128.3|TSPYL5|ENSG00000180543.3|TSPY-like 5
hg19_v2_chr17_-_27169745_27169857	0.00462815	CUGGCUG	ENST00000583307.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581229.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000582266.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000577376.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000577682.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581381.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000341217.5|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000581407.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B 	ENST00000583522.1|FAM222B|ENSG00000173065.9|family with sequence similarity 222, member B
hg19_v2_chr6_-_116833500_116833511	0.00423005	CUGGCUG	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr16_-_71843047_71843104	0.0041908	CUGGCUG	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr8_-_57123815_57123867	0.00326266	CUGGCUG	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr5_-_147162078_147162106	0.00307593	CUGGCUG	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr12_+_123319973_123320059	0.00306704	CUGGCUG	ENST00000253083.4|HIP1R|ENSG00000130787.9|huntingtin interacting protein 1 related
hg19_v2_chr15_-_65579177_65579253	0.00297143	CUGGCUG	ENST00000444347.2|PARP16|ENSG00000138617.10|poly (ADP-ribose) polymerase family, member 16 	ENST00000261888.6|PARP16|ENSG00000138617.10|poly (ADP-ribose) polymerase family, member 16
hg19_v2_chr10_-_61666267_61666414	0.00282065	CUGGCUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr10_+_73724123_73724206	0.00262714	CUGGCUG	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr1_-_112281875_112282046	0.00253455	CUGGCUG	ENST00000527621.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000534365.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000357260.5|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B
hg19_v2_chr12_-_14133053_14133159	0.00241336	CUGGCUG	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr11_-_62521614_62521660	0.0020713	CUGGCUG	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr3_+_48956249_48956330	0.00206431	CUGGCUG	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr10_-_105615164_105615323	0.00206237	CUGGCUG	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr15_-_64648273_64648442	0.00176735	CUGGCUG	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr8_+_75896731_75896750	0.00122462	CUGGCUG	ENST00000262207.4|CRISPLD1|ENSG00000121005.4|cysteine-rich secretory protein LCCL domain containing 1
hg19_v2_chr4_+_72204755_72204778	0.00110877	CUGGCUG	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr22_+_20067738_20067771	0.00103522	CUGGCUG	ENST00000351989.3|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit 	ENST00000383024.2|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit
hg19_v2_chr1_+_206557366_206557368	0.000817669	CUGGCUG	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chrX_+_154254960_154255103	0.000805741	CUGGCUG	ENST00000369498.3|FUNDC2|ENSG00000165775.13|FUN14 domain containing 2
hg19_v2_chr1_+_28696111_28696130	0.000773128	CUGGCUG	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr8_-_97173020_97173041	0.000649738	CUGGCUG	ENST00000287020.5|GDF6|ENSG00000156466.8|growth differentiation factor 6
hg19_v2_chr6_-_31864977_31865017	0.000472839	CUGGCUG	ENST00000395728.3|EHMT2|ENSG00000204371.7|euchromatic histone-lysine N-methyltransferase 2 	ENST00000375528.4|EHMT2|ENSG00000204371.7|euchromatic histone-lysine N-methyltransferase 2
hg19_v2_chr7_+_65338230_65338293	0.000429708	CUGGCUG	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr16_-_71758602_71758604	0.000189498	CUGGCUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr18_+_19749386_19749404	4.66297e-05	CUGGCUG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
