hg19_v2_chr3_-_114790179_114790222	0.0130457	CUACAGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr12_+_19592602_19592648	0.00782971	CUACAGU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr5_-_158526756_158526797	0.0074777	CUACAGU	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr2_-_160472952_160473080	0.00654401	CUACAGU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr1_+_61547894_61547980	0.00650979	CUACAGU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr16_+_58497567_58497586	0.00608681	CUACAGU	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chrX_-_25034065_25034088	0.00583466	CUACAGU	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr1_-_245027833_245027855	0.00579852	CUACAGU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr5_-_133561752_133561833	0.00528646	CUACAGU	ENST00000519718.1|CTD-2410N18.5|ENSG00000272772.1|S-phase kinase-associated protein 1  	ENST00000481195.1|PPP2CA|ENSG00000113575.5|protein phosphatase 2, catalytic subunit, alpha isozyme
hg19_v2_chr17_-_27621125_27621143	0.00482642	CUACAGU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr1_+_87794150_87794172	0.00474399	CUACAGU	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr1_-_156051789_156051838	0.00447385	CUACAGU	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr1_+_29563011_29563151	0.00411647	CUACAGU	ENST00000345512.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000373779.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000356870.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000323874.8|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000428026.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000460170.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U
hg19_v2_chr9_-_101471479_101471522	0.00411373	CUACAGU	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr6_-_16761678_16761721	0.00394077	CUACAGU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr20_+_62526467_62526540	0.0034321	CUACAGU	ENST00000369911.2|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5 	ENST00000360864.4|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5
hg19_v2_chr17_+_27717415_27717618	0.00333396	CUACAGU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr2_+_113033164_113033219	0.00324582	CUACAGU	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr17_-_78450398_78450413	0.00317443	CUACAGU	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr19_+_1249869_1249894	0.00305458	CUACAGU	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr1_-_21671968_21672009	0.0027499	CUACAGU	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr16_-_10674528_10674555	0.00270197	CUACAGU	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr1_-_156721502_156721536	0.00221134	CUACAGU	ENST00000357325.5|HDGF|ENSG00000143321.14|hepatoma-derived growth factor
hg19_v2_chr1_-_149982624_149982719	0.00213522	CUACAGU	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr1_+_2985760_2985775	0.00204544	CUACAGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr2_+_191273052_191273121	0.00192922	CUACAGU	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr4_+_113970772_113970885	0.00182108	CUACAGU	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr2_-_166930131_166930149	0.00163549	CUACAGU	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr19_+_10527449_10527619	0.00161322	CUACAGU	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chrX_-_33146477_33146521	0.00152773	CUACAGU	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr5_+_143584814_143584840	0.0015195	CUACAGU	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr16_-_755819_755860	0.00145321	CUACAGU	ENST00000397621.1|FBXL16|ENSG00000127585.7|F-box and leucine-rich repeat protein 16
hg19_v2_chr9_-_14314066_14314075	0.00142307	CUACAGU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr14_+_50359773_50359850	0.00135872	CUACAGU	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr5_+_15500280_15500312	0.00126317	CUACAGU	ENST00000504595.1|FBXL7|ENSG00000183580.8|F-box and leucine-rich repeat protein 7
hg19_v2_chr18_-_18691739_18691812	0.00109978	CUACAGU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr1_+_37940153_37940190	0.00102108	CUACAGU	ENST00000373087.6|ZC3H12A|ENSG00000163874.8|zinc finger CCCH-type containing 12A
hg19_v2_chr1_-_155532484_155532605	0.000983185	CUACAGU	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chrX_-_77041685_77041716	0.000974055	CUACAGU	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr8_+_81397876_81397902	0.000905698	CUACAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr12_+_57998595_57998621	0.000867233	CUACAGU	ENST00000337737.3|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000548198.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551632.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr3_-_124774802_124774852	0.000864279	CUACAGU	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr12_+_26348429_26348525	0.000808832	CUACAGU	ENST00000242729.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr20_-_4982132_4982164	0.000797344	CUACAGU	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr8_+_61591337_61591393	0.000766129	CUACAGU	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr1_-_70820357_70820435	0.000743539	CUACAGU	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr10_-_43903217_43903267	0.000725534	CUACAGU	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr2_-_208030647_208030689	0.000681972	CUACAGU	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr1_+_114472222_114472377	0.000632838	CUACAGU	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr16_+_57662419_57662526	0.000613727	CUACAGU	ENST00000388812.4|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000538815.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000456916.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000567154.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000388813.5|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562558.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566271.2|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr15_-_77363513_77363570	0.000584617	CUACAGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr4_+_134070439_134070470	0.000579394	CUACAGU	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr18_+_55018044_55018044	0.000578712	CUACAGU	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr2_+_181845298_181845378	0.000559214	CUACAGU	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr4_-_114682936_114683083	0.000536593	CUACAGU	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr9_+_77112244_77112281	0.000476758	CUACAGU	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr2_+_170683942_170683972	0.000445559	CUACAGU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr10_+_82213904_82213922	0.000433917	CUACAGU	ENST00000429989.3|TSPAN14|ENSG00000108219.10|tetraspanin 14
hg19_v2_chr18_+_3451646_3451722	0.000432124	CUACAGU	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr17_+_64298944_64298944	0.000428975	CUACAGU	ENST00000413366.3|PRKCA|ENSG00000154229.7|protein kinase C, alpha
hg19_v2_chr8_-_103876965_103877012	0.000428563	CUACAGU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr1_+_199996702_199996732	0.000420113	CUACAGU	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr1_+_162467595_162467655	0.000419192	CUACAGU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr5_-_147162078_147162106	0.000381921	CUACAGU	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr7_+_20370746_20370778	0.000378729	CUACAGU	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr11_+_92085262_92085262	0.000378224	CUACAGU	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr8_-_71316021_71316068	0.000338984	CUACAGU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr7_+_88388628_88388682	0.000229034	CUACAGU	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr12_+_67663056_67663067	0.000220071	CUACAGU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr10_-_735553_735683	0.000215315	CUACAGU	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr2_+_120517174_120517207	0.000173467	CUACAGU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr7_+_114055052_114055378	0.000155588	CUACAGU	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr10_-_70287231_70287290	0.000145852	CUACAGU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr18_+_49866496_49866548	0.000127797	CUACAGU	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr2_-_100721178_100721307	0.000119202	CUACAGU	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr17_+_56160768_56160786	0.00011375	CUACAGU	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr3_-_116164306_116164380	7.40766e-05	CUACAGU	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr6_+_37787262_37787291	4.90525e-05	CUACAGU	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr2_-_100106419_100106522	6.4598e-06	CUACAGU	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
