hg19_v2_chr22_-_39268308_39268319	0.0284792	CACCUCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr20_+_2673383_2673525	0.0192919	CACCUCC	ENST00000380648.4|EBF4|ENSG00000088881.16|early B-cell factor 4 	ENST00000342725.5|EBF4|ENSG00000088881.16|early B-cell factor 4
hg19_v2_chr16_+_30935418_30935418	0.015982	CACCUCC	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr14_+_23790655_23790680	0.0142478	CACCUCC	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr19_+_1450112_1450187	0.0125616	CACCUCC	ENST00000590469.1|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000233607.2|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000238483.4|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000590877.1|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2
hg19_v2_chr14_+_23775971_23776000	0.010794	CACCUCC	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr16_-_66584059_66584315	0.0104489	CACCUCC	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr9_+_35749203_35749350	0.0102749	CACCUCC	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr7_-_20826504_20826526	0.00858797	CACCUCC	ENST00000418710.2|SP8|ENSG00000164651.12|Sp8 transcription factor 	ENST00000361443.4|SP8|ENSG00000164651.12|Sp8 transcription factor
hg19_v2_chr1_-_151138323_151138395	0.00818486	CACCUCC	ENST00000368908.5|LYSMD1|ENSG00000163155.7|LysM, putative peptidoglycan-binding, domain containing 1
hg19_v2_chr2_-_25475120_25475180	0.00724386	CACCUCC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr11_+_73087309_73087452	0.00668457	CACCUCC	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr9_-_101471479_101471522	0.00645373	CACCUCC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr1_+_11714914_11714976	0.00622253	CACCUCC	ENST00000425796.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376770.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376768.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000251547.5|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376760.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376762.4|FBXO44|ENSG00000132879.9|F-box protein 44
hg19_v2_chr6_-_30524951_30524957	0.00572355	CACCUCC	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr1_+_46972668_46972669	0.00544491	CACCUCC	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr15_+_90544532_90544624	0.00522248	CACCUCC	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr11_-_64570706_64570717	0.00500977	CACCUCC	ENST00000294066.2|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2 	ENST00000377350.3|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2
hg19_v2_chr17_-_42298331_42298361	0.00486709	CACCUCC	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr1_+_19638788_19638835	0.0041827	CACCUCC	ENST00000375155.3|PQLC2|ENSG00000040487.8|PQ loop repeat containing 2 	ENST00000375153.3|PQLC2|ENSG00000040487.8|PQ loop repeat containing 2 	ENST00000400548.2|PQLC2|ENSG00000040487.8|PQ loop repeat containing 2
hg19_v2_chr3_-_48471454_48471594	0.00386481	CACCUCC	ENST00000296440.6|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000448774.2|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chr14_-_23755297_23755350	0.00333216	CACCUCC	ENST00000357460.5|HOMEZ|ENSG00000215271.6|homeobox and leucine zipper encoding
hg19_v2_chr17_+_55333876_55333939	0.00332725	CACCUCC	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr15_-_73661605_73661605	0.00310053	CACCUCC	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr3_-_45017609_45017687	0.0025439	CACCUCC	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr14_+_23776024_23776105	0.00245565	CACCUCC	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr9_-_130829588_130829636	0.00245184	CACCUCC	ENST00000373078.4|NAIF1|ENSG00000171169.8|nuclear apoptosis inducing factor 1
hg19_v2_chr8_+_61591337_61591393	0.00175655	CACCUCC	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr17_+_56160768_56160786	0.00167577	CACCUCC	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr11_-_65430251_65430399	0.000832197	CACCUCC	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr15_-_34502278_34502318	0.000470452	CACCUCC	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr8_+_11141925_11141937	0.000232781	CACCUCC	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr4_-_78740511_78740544	0.000120035	CACCUCC	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
