hg19_v2_chr9_-_127905736_127905815	0.18225	AUGGCUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr4_+_57371509_57371509	0.145816	AUGGCUU	ENST00000360096.2|ARL9|ENSG00000196503.2|ADP-ribosylation factor-like 9
hg19_v2_chr2_+_10861775_10861786	0.135374	AUGGCUU	ENST00000272238.4|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 	ENST00000381661.3|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg19_v2_chr10_+_5454505_5454540	0.127768	AUGGCUU	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr3_+_197687071_197687128	0.127055	AUGGCUU	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr2_+_48541776_48541874	0.126912	AUGGCUU	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr15_+_27111510_27111644	0.126498	AUGGCUU	ENST00000335625.5|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr15_-_68498376_68498417	0.126496	AUGGCUU	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr10_+_18948311_18948417	0.123805	AUGGCUU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr2_-_11484710_11484812	0.122869	AUGGCUU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr3_-_141944398_141944465	0.121896	AUGGCUU	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chrX_+_108780062_108780105	0.116204	AUGGCUU	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr13_+_98086445_98086493	0.114846	AUGGCUU	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr15_+_59730348_59730435	0.110402	AUGGCUU	ENST00000288228.5|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000559628.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000557914.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000560474.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A
hg19_v2_chr13_-_41240717_41240735	0.110301	AUGGCUU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr5_+_43121698_43121786	0.102035	AUGGCUU	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr10_+_76586348_76586400	0.0998558	AUGGCUU	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr5_+_72251793_72251825	0.0994181	AUGGCUU	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr1_+_65210772_65210840	0.0977694	AUGGCUU	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr6_-_11044509_11044582	0.0975287	AUGGCUU	ENST00000354666.3|ELOVL2|ENSG00000197977.3|ELOVL fatty acid elongase 2
hg19_v2_chrX_-_154493791_154493874	0.0965303	AUGGCUU	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr17_+_42081914_42082125	0.0964996	AUGGCUU	ENST00000293404.3|NAGS|ENSG00000161653.6|N-acetylglutamate synthase 	ENST00000589767.1|NAGS|ENSG00000161653.6|N-acetylglutamate synthase
hg19_v2_chr20_-_52210368_52210384	0.0933946	AUGGCUU	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr3_-_72496035_72496069	0.093368	AUGGCUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr6_+_11094266_11094506	0.0918022	AUGGCUU	ENST00000416247.2|SMIM13|ENSG00000224531.4|small integral membrane protein 13
hg19_v2_chr13_+_31774073_31774153	0.0913069	AUGGCUU	ENST00000343307.4|B3GALTL|ENSG00000187676.7|beta 1,3-galactosyltransferase-like
hg19_v2_chr16_-_47177874_47177922	0.0902477	AUGGCUU	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr15_-_100258029_100258029	0.0899053	AUGGCUU	ENST00000378904.2|DKFZP779J2370|ENSG00000214397.2|DKFZP779J2370
hg19_v2_chr3_-_171178157_171178225	0.089477	AUGGCUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_-_7197881_7197901	0.0889801	AUGGCUU	ENST00000007699.5|YBX2|ENSG00000006047.8|Y box binding protein 2
hg19_v2_chr18_-_51751132_51751158	0.0873481	AUGGCUU	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr5_+_76506706_76506787	0.0860587	AUGGCUU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr19_+_30433110_30433214	0.0849709	AUGGCUU	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr20_-_62462566_62462631	0.08179	AUGGCUU	ENST00000245663.4|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46 	ENST00000302995.2|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46
hg19_v2_chr17_-_66287257_66287276	0.0815846	AUGGCUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr10_+_88516396_88516426	0.0797822	AUGGCUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr21_+_30671189_30671207	0.0793122	AUGGCUU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr18_-_18691739_18691812	0.0791456	AUGGCUU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr6_+_18155560_18155624	0.0789522	AUGGCUU	ENST00000546309.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000388870.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000397244.1|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B
hg19_v2_chr17_-_60005365_60005377	0.0789025	AUGGCUU	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr11_-_95657231_95657459	0.0777939	AUGGCUU	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr3_+_43328004_43328095	0.0769329	AUGGCUU	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr13_-_107187462_107187462	0.0769114	AUGGCUU	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr7_-_105925558_105925638	0.0767301	AUGGCUU	ENST00000222553.3|NAMPT|ENSG00000105835.7|nicotinamide phosphoribosyltransferase
hg19_v2_chr11_-_108093329_108093375	0.0760678	AUGGCUU	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr7_+_152456829_152456900	0.0712288	AUGGCUU	ENST00000377776.3|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000256001.8|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000397282.2|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr12_-_29534074_29534127	0.0711502	AUGGCUU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr10_-_60027642_60027705	0.0707258	AUGGCUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr12_+_79258547_79258607	0.0690334	AUGGCUU	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr3_+_191046810_191046874	0.0684407	AUGGCUU	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr10_-_91403625_91403649	0.0678245	AUGGCUU	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr1_-_184723942_184724047	0.0676279	AUGGCUU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr12_+_105501487_105501562	0.0669915	AUGGCUU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr15_+_77712993_77713081	0.0669565	AUGGCUU	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chrX_+_103411189_103411301	0.066688	AUGGCUU	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr14_-_57735528_57735726	0.0666856	AUGGCUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr15_-_50978965_50979012	0.0665022	AUGGCUU	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr17_-_7832753_7832753	0.0660007	AUGGCUU	ENST00000303790.2|KCNAB3|ENSG00000170049.5|potassium voltage-gated channel, shaker-related subfamily, beta member 3
hg19_v2_chr1_-_68962782_68962801	0.0657709	AUGGCUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr10_-_88281494_88281572	0.0655956	AUGGCUU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr6_-_10415470_10415508	0.0654352	AUGGCUU	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr5_-_98262240_98262240	0.0646579	AUGGCUU	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr1_-_71546690_71546730	0.0646005	AUGGCUU	ENST00000254821.6|ZRANB2|ENSG00000132485.8|zinc finger, RAN-binding domain containing 2
hg19_v2_chr4_+_52709229_52709345	0.0639217	AUGGCUU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr7_-_107204337_107204485	0.0639067	AUGGCUU	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr4_+_140374961_140375016	0.0634032	AUGGCUU	ENST00000305626.5|RAB33B|ENSG00000172007.5|RAB33B, member RAS oncogene family
hg19_v2_chr3_+_105085734_105085760	0.0629087	AUGGCUU	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr13_-_50367057_50367142	0.062331	AUGGCUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr12_+_27396901_27397108	0.0616605	AUGGCUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chrY_+_15016725_15016769	0.0615451	AUGGCUU	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr1_-_229478236_229478308	0.0612798	AUGGCUU	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr2_-_175351744_175351828	0.0608499	AUGGCUU	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr6_+_87865262_87865339	0.0605803	AUGGCUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr4_-_39033963_39034047	0.0603991	AUGGCUU	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr12_+_64845660_64845702	0.0601052	AUGGCUU	ENST00000331710.5|TBK1|ENSG00000183735.5|TANK-binding kinase 1
hg19_v2_chr2_+_183580954_183581049	0.0596673	AUGGCUU	ENST00000264065.7|DNAJC10|ENSG00000077232.12|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v2_chr2_+_198380289_198380305	0.0590256	AUGGCUU	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr10_+_114709999_114710031	0.0586595	AUGGCUU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr14_-_55878538_55878576	0.057696	AUGGCUU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr3_+_111578027_111578080	0.0573494	AUGGCUU	ENST00000431670.2|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2 	ENST00000412622.1|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chr4_+_47033345_47033377	0.0571828	AUGGCUU	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr4_-_111119804_111119832	0.0570934	AUGGCUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chrX_-_135849484_135849551	0.0561439	AUGGCUU	ENST00000370620.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENST00000535227.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr7_+_5085452_5085553	0.055741	AUGGCUU	ENST00000353796.3|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger 	ENST00000396904.2|RBAK-RBAKDN|ENSG00000272968.1|RBAK-RBAKDN readthrough 	ENST00000396912.1|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger
hg19_v2_chr13_+_95254085_95254171	0.055589	AUGGCUU	ENST00000376958.4|GPR180|ENSG00000152749.7|G protein-coupled receptor 180
hg19_v2_chr2_+_238536207_238536290	0.0551494	AUGGCUU	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr18_+_32558208_32558340	0.0549558	AUGGCUU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr14_+_103058948_103059005	0.0545756	AUGGCUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr4_-_47916613_47916640	0.0543052	AUGGCUU	ENST00000381538.3|NFXL1|ENSG00000170448.7|nuclear transcription factor, X-box binding-like 1 	ENST00000329043.3|NFXL1|ENSG00000170448.7|nuclear transcription factor, X-box binding-like 1
hg19_v2_chr6_-_17706618_17706666	0.0535123	AUGGCUU	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr8_+_59465728_59465826	0.0532998	AUGGCUU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr1_+_24882560_24882620	0.0532215	AUGGCUU	ENST00000374392.2|NCMAP|ENSG00000184454.6|noncompact myelin associated protein
hg19_v2_chr1_-_94374946_94374994	0.0530139	AUGGCUU	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr4_+_99182593_99182669	0.0528481	AUGGCUU	ENST00000508213.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408927.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000514122.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000453712.2|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000511212.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408900.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000339360.5|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1
hg19_v2_chr18_-_23670546_23670605	0.0525019	AUGGCUU	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr9_+_15553055_15553101	0.0522475	AUGGCUU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr14_+_55493920_55494013	0.0520521	AUGGCUU	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr5_+_112043186_112043225	0.051808	AUGGCUU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr12_+_108525517_108525531	0.0510229	AUGGCUU	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr1_-_243418344_243418356	0.0505582	AUGGCUU	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr18_+_9475668_9475698	0.0500304	AUGGCUU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chrX_+_12156582_12156603	0.0498909	AUGGCUU	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr2_-_153574480_153574552	0.0496081	AUGGCUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr10_+_112836779_112836797	0.0492342	AUGGCUU	ENST00000280155.2|ADRA2A|ENSG00000150594.5|adrenoceptor alpha 2A
hg19_v2_chr7_+_77325738_77325789	0.0491123	AUGGCUU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr17_-_38804061_38804112	0.0489205	AUGGCUU	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr10_-_114206649_114206688	0.0486811	AUGGCUU	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr17_-_62340581_62340671	0.0486716	AUGGCUU	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr3_+_142442841_142443011	0.0479833	AUGGCUU	ENST00000476941.1|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1 	ENST00000273482.6|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1
hg19_v2_chr11_-_77532050_77532066	0.047663	AUGGCUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr1_-_220445757_220445819	0.0472677	AUGGCUU	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr22_+_24115000_24115020	0.0461211	AUGGCUU	ENST00000215743.3|MMP11|ENSG00000099953.5|matrix metallopeptidase 11 (stromelysin 3)
hg19_v2_chr7_-_75988321_75988348	0.0457364	AUGGCUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr1_+_178694300_178694346	0.0456303	AUGGCUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chrX_+_41192595_41192651	0.0455499	AUGGCUU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr18_-_45456930_45456970	0.0450979	AUGGCUU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr10_-_52383644_52383743	0.0450504	AUGGCUU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr4_-_819901_819986	0.0449519	AUGGCUU	ENST00000304062.6|CPLX1|ENSG00000168993.10|complexin 1
hg19_v2_chr11_-_101454658_101454671	0.044584	AUGGCUU	ENST00000344327.3|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr8_-_104427313_104427413	0.0444007	AUGGCUU	ENST00000297578.4|SLC25A32|ENSG00000164933.7|solute carrier family 25 (mitochondrial folate carrier), member 32
hg19_v2_chr3_+_16926441_16926463	0.0439371	AUGGCUU	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr1_-_205719295_205719404	0.04274	AUGGCUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr22_+_40390930_40390994	0.04268	AUGGCUU	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr11_+_33278811_33279133	0.0425197	AUGGCUU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr12_+_27485823_27485868	0.0423418	AUGGCUU	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr14_-_53417732_53417815	0.0422465	AUGGCUU	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr14_+_102228123_102228237	0.0419459	AUGGCUU	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr11_+_62475130_62475195	0.0418082	AUGGCUU	ENST00000294117.5|GNG3|ENSG00000162188.5|guanine nucleotide binding protein (G protein), gamma 3
hg19_v2_chr1_-_111682662_111682734	0.0417933	AUGGCUU	ENST00000286692.4|DRAM2|ENSG00000156171.10|DNA-damage regulated autophagy modulator 2
hg19_v2_chr2_+_61404624_61404666	0.0416679	AUGGCUU	ENST00000394457.3|AHSA2|ENSG00000173209.18|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
hg19_v2_chr1_-_46598284_46598356	0.0412012	AUGGCUU	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr1_-_212004090_212004168	0.0409284	AUGGCUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr1_-_205601064_205601090	0.0408732	AUGGCUU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr17_+_29421900_29421951	0.04057	AUGGCUU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr9_-_129885010_129885162	0.0404457	AUGGCUU	ENST00000373425.3|ANGPTL2|ENSG00000136859.5|angiopoietin-like 2
hg19_v2_chr1_-_225840747_225840860	0.040367	AUGGCUU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr9_+_4985228_4985245	0.0403154	AUGGCUU	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr20_-_60640866_60640901	0.0402913	AUGGCUU	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr1_+_97187318_97187380	0.0401524	AUGGCUU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr6_-_26659913_26659982	0.0399291	AUGGCUU	ENST00000480036.1|ZNF322|ENSG00000181315.6|zinc finger protein 322 	ENST00000415922.2|ZNF322|ENSG00000181315.6|zinc finger protein 322
hg19_v2_chr3_+_159943362_159943423	0.0396325	AUGGCUU	ENST00000326474.3|C3orf80|ENSG00000180044.3|chromosome 3 open reading frame 80
hg19_v2_chr17_+_26989109_26989248	0.0395772	AUGGCUU	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr11_-_59436453_59436530	0.0395583	AUGGCUU	ENST00000300146.9|PATL1|ENSG00000166889.13|protein associated with topoisomerase II homolog 1 (yeast)
hg19_v2_chr11_+_120107344_120107351	0.0395562	AUGGCUU	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr9_+_112542572_112542590	0.0392915	AUGGCUU	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr9_+_129622904_129622956	0.0392522	AUGGCUU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr17_-_48785216_48785291	0.0390211	AUGGCUU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr17_+_59529743_59529798	0.0389945	AUGGCUU	ENST00000589003.1|TBX4|ENSG00000121075.5|T-box 4 	ENST00000393853.4|TBX4|ENSG00000121075.5|T-box 4
hg19_v2_chr21_+_38071430_38071456	0.0386757	AUGGCUU	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr7_+_31092076_31092106	0.038647	AUGGCUU	ENST00000304166.4|ADCYAP1R1|ENSG00000078549.10|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
hg19_v2_chr1_-_150849208_150849244	0.0385171	AUGGCUU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr3_+_169684553_169684616	0.0384868	AUGGCUU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr14_-_90085458_90085557	0.037984	AUGGCUU	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr10_-_75008620_75008620	0.0377312	AUGGCUU	ENST00000372950.4|DNAJC9|ENSG00000213551.4|DnaJ (Hsp40) homolog, subfamily C, member 9
hg19_v2_chr11_+_22214708_22214730	0.0374658	AUGGCUU	ENST00000324559.8|ANO5|ENSG00000171714.10|anoctamin 5
hg19_v2_chr13_-_21635631_21635744	0.0371181	AUGGCUU	ENST00000382592.4|LATS2|ENSG00000150457.7|large tumor suppressor kinase 2
hg19_v2_chr6_+_133562472_133562556	0.0368997	AUGGCUU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr3_+_152017181_152017229	0.0368734	AUGGCUU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr3_-_53381539_53381654	0.0366577	AUGGCUU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr19_-_55954230_55954230	0.0364196	AUGGCUU	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr14_-_81687197_81687280	0.0364183	AUGGCUU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr5_-_168006591_168006638	0.0363411	AUGGCUU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr11_+_13299186_13299432	0.0356092	AUGGCUU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr1_+_27719148_27719184	0.0353902	AUGGCUU	ENST00000374024.3|GPR3|ENSG00000181773.6|G protein-coupled receptor 3
hg19_v2_chr2_+_18059906_18059945	0.0351859	AUGGCUU	ENST00000304101.4|KCNS3|ENSG00000170745.7|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg19_v2_chr10_+_76871454_76871467	0.0350567	AUGGCUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr20_+_49126881_49126936	0.0350547	AUGGCUU	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr8_+_21777159_21777221	0.0350499	AUGGCUU	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr6_+_151815143_151815212	0.0341755	AUGGCUU	ENST00000239374.7|CCDC170|ENSG00000120262.8|coiled-coil domain containing 170 	ENST00000367290.5|CCDC170|ENSG00000120262.8|coiled-coil domain containing 170
hg19_v2_chr20_-_61569227_61569287	0.0341138	AUGGCUU	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr8_-_70747205_70747299	0.0336436	AUGGCUU	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr14_+_67826709_67826751	0.0334796	AUGGCUU	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr5_+_109025067_109025146	0.0331216	AUGGCUU	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr20_+_39765581_39765646	0.0330079	AUGGCUU	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr10_-_89577910_89578010	0.0329027	AUGGCUU	ENST00000308448.7|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1 	ENST00000541004.1|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1
hg19_v2_chr7_-_83824169_83824217	0.0317877	AUGGCUU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr18_-_29522989_29523104	0.0316511	AUGGCUU	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr9_-_32552551_32552576	0.0311535	AUGGCUU	ENST00000360538.2|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 	ENST00000379858.1|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v2_chr5_-_136834982_136835037	0.0310622	AUGGCUU	ENST00000510689.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 	ENST00000394945.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v2_chr3_-_79068594_79068627	0.0310088	AUGGCUU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr6_-_86352642_86352709	0.0305167	AUGGCUU	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr3_+_113666748_113666846	0.0304748	AUGGCUU	ENST00000330212.3|ZDHHC23|ENSG00000184307.9|zinc finger, DHHC-type containing 23 	ENST00000498275.1|ZDHHC23|ENSG00000184307.9|zinc finger, DHHC-type containing 23
hg19_v2_chr14_-_45431091_45431175	0.030207	AUGGCUU	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr16_+_8768422_8768453	0.0299404	AUGGCUU	ENST00000268251.8|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase 	ENST00000564714.1|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase
hg19_v2_chr15_-_72410109_72410161	0.0299254	AUGGCUU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr8_-_82754427_82754539	0.0298727	AUGGCUU	ENST00000353788.4|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000520618.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000518183.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000396330.2|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000519119.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000345957.4|SNX16|ENSG00000104497.9|sorting nexin 16
hg19_v2_chr1_+_181452678_181452716	0.0293919	AUGGCUU	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr4_+_128703295_128703496	0.0286941	AUGGCUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr2_-_47798044_47798132	0.028358	AUGGCUU	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr9_+_112810878_112810985	0.0280895	AUGGCUU	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr1_-_33338076_33338105	0.0277255	AUGGCUU	ENST00000496770.1|FNDC5|ENSG00000160097.11|fibronectin type III domain containing 5
hg19_v2_chr5_+_135468516_135468621	0.0276092	AUGGCUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr8_+_110552337_110552423	0.0275276	AUGGCUU	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr10_+_20105157_20105184	0.027484	AUGGCUU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr1_+_159141397_159141549	0.0273114	AUGGCUU	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr10_+_112679301_112679346	0.0269449	AUGGCUU	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr7_-_139876812_139876860	0.0265243	AUGGCUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr1_-_93257951_93257981	0.0260373	AUGGCUU	ENST00000543509.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000370331.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000540033.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5
hg19_v2_chr19_-_51141196_51141302	0.0259869	AUGGCUU	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chr8_+_98656336_98656535	0.0259008	AUGGCUU	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chrX_-_53449593_53449677	0.0258034	AUGGCUU	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr2_+_24714729_24714927	0.0257602	AUGGCUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr2_+_68694678_68694734	0.0255781	AUGGCUU	ENST00000303795.4|APLF|ENSG00000169621.5|aprataxin and PNKP like factor
hg19_v2_chr14_+_99947715_99947791	0.0251663	AUGGCUU	ENST00000389879.5|CCNK|ENSG00000090061.13|cyclin K 	ENST00000557441.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555049.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555842.1|CCNK|ENSG00000090061.13|cyclin K
hg19_v2_chrX_+_95939711_95939786	0.0251639	AUGGCUU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr1_+_171810606_171810649	0.0249837	AUGGCUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr10_+_126630692_126630692	0.0246275	AUGGCUU	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr20_+_47538357_47538427	0.024335	AUGGCUU	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr2_+_201676256_201676323	0.0241904	AUGGCUU	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr6_-_119670919_119670943	0.024065	AUGGCUU	ENST00000368468.3|MAN1A1|ENSG00000111885.5|mannosidase, alpha, class 1A, member 1
hg19_v2_chr11_-_106889250_106889264	0.0238566	AUGGCUU	ENST00000526355.2|GUCY1A2|ENSG00000152402.6|guanylate cyclase 1, soluble, alpha 2
hg19_v2_chr19_-_35454953_35454984	0.0238369	AUGGCUU	ENST00000404801.1|ZNF792|ENSG00000180884.9|zinc finger protein 792
hg19_v2_chr10_+_93683519_93683594	0.0235943	AUGGCUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr2_+_155554797_155554837	0.0235313	AUGGCUU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr1_-_244013384_244013430	0.0233952	AUGGCUU	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr10_+_97515409_97515442	0.0230965	AUGGCUU	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr8_+_94929168_94929235	0.0230456	AUGGCUU	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr19_+_57862622_57862694	0.0230013	AUGGCUU	ENST00000391705.3|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000443917.2|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000598744.1|ZNF304|ENSG00000131845.10|zinc finger protein 304
hg19_v2_chr11_-_1593150_1593150	0.0229527	AUGGCUU	ENST00000397374.3|DUSP8|ENSG00000184545.6|dual specificity phosphatase 8
hg19_v2_chr15_-_33360085_33360256	0.0227882	AUGGCUU	ENST00000334528.9|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr15_-_48470558_48470714	0.0226523	AUGGCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr3_-_119813264_119813272	0.0223323	AUGGCUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr2_-_174830430_174830563	0.0223199	AUGGCUU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr2_+_178077477_178077525	0.0222876	AUGGCUU	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr8_-_23315190_23315235	0.0221489	AUGGCUU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr17_-_80606304_80606411	0.0218877	AUGGCUU	ENST00000392325.4|WDR45B|ENSG00000141580.11|WD repeat domain 45B
hg19_v2_chr5_-_41510656_41510713	0.0218269	AUGGCUU	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chrX_-_24045303_24045303	0.0216873	AUGGCUU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr17_+_28705921_28706000	0.0214107	AUGGCUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr14_-_23388338_23388393	0.0213084	AUGGCUU	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr11_+_68228186_68228281	0.0210312	AUGGCUU	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr9_-_80646374_80646374	0.0209537	AUGGCUU	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr3_-_135914615_135914701	0.0200108	AUGGCUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr1_-_157108130_157108173	0.019883	AUGGCUU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr11_+_9482512_9482534	0.0197945	AUGGCUU	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr5_-_36152031_36152063	0.0197444	AUGGCUU	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr6_+_148663729_148663847	0.0194785	AUGGCUU	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr8_-_142011316_142011400	0.0192738	AUGGCUU	ENST00000522684.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000395218.2|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000524357.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000521332.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000524040.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519881.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000520045.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr2_+_204192942_204193038	0.0191653	AUGGCUU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr3_-_56502375_56502428	0.019027	AUGGCUU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr6_-_116381918_116381977	0.0187759	AUGGCUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr6_+_35182176_35182196	0.0187717	AUGGCUU	ENST00000394681.1|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3 	ENST00000274938.7|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3
hg19_v2_chr18_+_59854480_59854551	0.0186362	AUGGCUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr19_-_2702681_2702707	0.0184295	AUGGCUU	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr7_-_105517021_105517050	0.0183777	AUGGCUU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_+_15853308_15853413	0.0182785	AUGGCUU	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr9_+_5629025_5629119	0.0179124	AUGGCUU	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr9_-_126030817_126030906	0.0177944	AUGGCUU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr1_-_93645818_93645918	0.0177815	AUGGCUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr11_+_19138670_19138732	0.0175294	AUGGCUU	ENST00000446113.2|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13 	ENST00000399351.3|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13
hg19_v2_chr11_-_13484713_13484850	0.0175225	AUGGCUU	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr6_+_163835669_163835693	0.0175206	AUGGCUU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr11_-_130184555_130184581	0.0175162	AUGGCUU	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr3_-_105587879_105587892	0.017162	AUGGCUU	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr3_+_138066539_138066580	0.0171505	AUGGCUU	ENST00000289104.4|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr12_+_57984965_57985059	0.0170715	AUGGCUU	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr9_-_15510989_15511017	0.0164112	AUGGCUU	ENST00000380715.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380716.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380738.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380733.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr2_+_198365122_198365137	0.0163074	AUGGCUU	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr10_+_105253661_105253736	0.0160079	AUGGCUU	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr7_-_27142290_27142430	0.0158325	AUGGCUU	ENST00000222718.5|HOXA2|ENSG00000105996.5|homeobox A2
hg19_v2_chr15_+_38544476_38544574	0.0157436	AUGGCUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr9_+_101867359_101867376	0.0156853	AUGGCUU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr4_-_42659102_42659161	0.0155041	AUGGCUU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr12_-_111021110_111021142	0.0154644	AUGGCUU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr1_+_224301787_224301836	0.015456	AUGGCUU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr12_+_58138800_58138860	0.0152399	AUGGCUU	ENST00000547992.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000552816.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000547472.1|TSPAN31|ENSG00000135452.5|tetraspanin 31
hg19_v2_chr1_-_154842741_154842772	0.0151089	AUGGCUU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr1_+_224544552_224544570	0.0150753	AUGGCUU	ENST00000465271.1|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4 	ENST00000366858.3|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4
hg19_v2_chr7_+_12250886_12250933	0.0150301	AUGGCUU	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr6_-_150185156_150185200	0.0150184	AUGGCUU	ENST00000239367.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11 	ENST00000367368.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11
hg19_v2_chr7_+_149535455_149535555	0.0149756	AUGGCUU	ENST00000223210.4|ZNF862|ENSG00000106479.6|zinc finger protein 862 	ENST00000460379.1|ZNF862|ENSG00000106479.6|zinc finger protein 862
hg19_v2_chr15_-_45815005_45815032	0.0149586	AUGGCUU	ENST00000261867.4|SLC30A4|ENSG00000104154.5|solute carrier family 30 (zinc transporter), member 4
hg19_v2_chr17_-_60142609_60142657	0.0149362	AUGGCUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr8_+_38758737_38758763	0.0148027	AUGGCUU	ENST00000521746.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 	ENST00000420274.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg19_v2_chr1_-_166944652_166944733	0.0145603	AUGGCUU	ENST00000528703.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000525740.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529387.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000469934.2|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000529071.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2 	ENST00000526687.1|ILDR2|ENSG00000143195.8|immunoglobulin-like domain containing receptor 2
hg19_v2_chr21_-_32931290_32931341	0.0144437	AUGGCUU	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr8_-_12612962_12613049	0.0143952	AUGGCUU	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr13_+_80055284_80055295	0.0143193	AUGGCUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr8_+_28747884_28747938	0.0142812	AUGGCUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr2_-_122407097_122407163	0.014168	AUGGCUU	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr15_+_32907691_32907772	0.0141511	AUGGCUU	ENST00000361627.3|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000567348.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000563864.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000543522.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A
hg19_v2_chr2_-_64881018_64881064	0.0138445	AUGGCUU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr7_-_35734730_35734777	0.013793	AUGGCUU	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr8_+_24772455_24772535	0.0137659	AUGGCUU	ENST00000433454.2|NEFM|ENSG00000104722.9|neurofilament, medium polypeptide
hg19_v2_chr6_-_7313381_7313458	0.0135325	AUGGCUU	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chrX_+_152783131_152783151	0.0133117	AUGGCUU	ENST00000349466.2|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3 	ENST00000370186.1|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3
hg19_v2_chr16_+_69599861_69599887	0.0131941	AUGGCUU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr2_+_176987088_176987088	0.0131478	AUGGCUU	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr3_+_107241783_107241850	0.0131266	AUGGCUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr2_+_32390925_32390941	0.0130769	AUGGCUU	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chr7_-_32338917_32338946	0.0128753	AUGGCUU	ENST00000396193.1|PDE1C|ENSG00000154678.12|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v2_chr8_-_143696833_143696833	0.0125037	AUGGCUU	ENST00000356613.2|ARC|ENSG00000198576.2|activity-regulated cytoskeleton-associated protein
hg19_v2_chr5_+_53813536_53813613	0.0124644	AUGGCUU	ENST00000343017.6|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000381410.4|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000326277.3|SNX18|ENSG00000178996.8|sorting nexin 18
hg19_v2_chr7_-_71801980_71802013	0.0123762	AUGGCUU	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr5_-_148930960_148931013	0.0120759	AUGGCUU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr15_+_91643442_91643521	0.0120303	AUGGCUU	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chr22_+_31608219_31608303	0.0119509	AUGGCUU	ENST00000406516.1|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000444929.2|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000331728.4|LIMK2|ENSG00000182541.13|LIM domain kinase 2
hg19_v2_chrX_+_152599604_152599626	0.0117888	AUGGCUU	ENST00000370251.3|ZNF275|ENSG00000063587.12|zinc finger protein 275 	ENST00000421401.3|ZNF275|ENSG00000063587.12|zinc finger protein 275
hg19_v2_chr20_-_17662878_17662940	0.0116282	AUGGCUU	ENST00000377813.1|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000377807.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000360807.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000398782.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr17_+_12569306_12569344	0.0116251	AUGGCUU	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr6_+_88182643_88182722	0.0115889	AUGGCUU	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr19_-_17799008_17799122	0.0115602	AUGGCUU	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
hg19_v2_chr8_-_133493200_133493352	0.0114969	AUGGCUU	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr4_-_140477928_140477990	0.0114865	AUGGCUU	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr3_+_122283064_122283091	0.0114679	AUGGCUU	ENST00000296161.4|DTX3L|ENSG00000163840.5|deltex 3-like (Drosophila)
hg19_v2_chr4_+_170541660_170541677	0.0114479	AUGGCUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr10_-_75173785_75173844	0.0114226	AUGGCUU	ENST00000535178.1|ANXA7|ENSG00000138279.11|annexin A7 	ENST00000372921.5|ANXA7|ENSG00000138279.11|annexin A7 	ENST00000372919.4|ANXA7|ENSG00000138279.11|annexin A7
hg19_v2_chr8_-_55014415_55014595	0.0114063	AUGGCUU	ENST00000522007.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000521898.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000518546.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000316963.3|LYPLA1|ENSG00000120992.13|lysophospholipase I
hg19_v2_chr11_-_118047376_118047388	0.0112142	AUGGCUU	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr1_-_231004220_231004399	0.0110835	AUGGCUU	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr5_-_131132658_131132719	0.0110411	AUGGCUU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr20_+_30865429_30865480	0.0110008	AUGGCUU	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr4_+_38665810_38665827	0.0109808	AUGGCUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr17_+_34900737_34900821	0.0109392	AUGGCUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr6_-_94129244_94129284	0.0107423	AUGGCUU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr2_+_7057523_7057613	0.0106159	AUGGCUU	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr12_+_65672423_65672553	0.0106043	AUGGCUU	ENST00000355192.3|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000308259.5|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000540804.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000535664.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000541189.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3
hg19_v2_chr10_-_99052382_99052413	0.0104724	AUGGCUU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr13_+_42622781_42622889	0.0104322	AUGGCUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr6_+_137143694_137143755	0.0101827	AUGGCUU	ENST00000367756.4|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7 	ENST00000541292.1|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7 	ENST00000318471.4|PEX7|ENSG00000112357.8|peroxisomal biogenesis factor 7
hg19_v2_chr13_-_76056250_76056280	0.00997478	AUGGCUU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr3_-_64673289_64673355	0.00996328	AUGGCUU	ENST00000295903.4|ADAMTS9|ENSG00000163638.9|ADAM metallopeptidase with thrombospondin type 1 motif, 9
hg19_v2_chr9_+_2621798_2621834	0.00978983	AUGGCUU	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr16_-_71758602_71758604	0.00970136	AUGGCUU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr8_-_18871159_18871201	0.00961483	AUGGCUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr18_+_29671812_29671892	0.00956661	AUGGCUU	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr17_+_57297807_57297923	0.00928574	AUGGCUU	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr8_-_62627057_62627159	0.00916642	AUGGCUU	ENST00000519234.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379449.6|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379454.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518068.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517856.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000356457.5|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr16_-_80838195_80838228	0.00891478	AUGGCUU	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr4_+_78078304_78078406	0.00832803	AUGGCUU	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chrX_+_37865804_37865842	0.00828715	AUGGCUU	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr12_-_58240470_58240522	0.00822517	AUGGCUU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr8_-_71316021_71316068	0.00763019	AUGGCUU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr10_-_735553_735683	0.00727514	AUGGCUU	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr22_+_50247449_50247515	0.00701878	AUGGCUU	ENST00000216268.5|ZBED4|ENSG00000100426.6|zinc finger, BED-type containing 4
hg19_v2_chrX_-_13956737_13956808	0.00701125	AUGGCUU	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr6_-_53409890_53409927	0.00655211	AUGGCUU	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr14_+_74111578_74111730	0.00652541	AUGGCUU	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr1_+_2160134_2160134	0.00638448	AUGGCUU	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr5_+_75378997_75379080	0.00603626	AUGGCUU	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr8_-_4852218_4852246	0.00594506	AUGGCUU	ENST00000400186.3|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1 	ENST00000602723.1|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1
hg19_v2_chr8_+_99129513_99129570	0.00568089	AUGGCUU	ENST00000522319.1|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 	ENST00000401707.2|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr9_+_2015335_2015374	0.00553701	AUGGCUU	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr12_+_56367697_56367893	0.00522013	AUGGCUU	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr17_-_27621125_27621143	0.00513822	AUGGCUU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr10_+_69644404_69644427	0.00499765	AUGGCUU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr15_-_64648273_64648442	0.00481924	AUGGCUU	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr6_+_36562132_36562154	0.00474944	AUGGCUU	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr20_-_48099182_48099214	0.00462816	AUGGCUU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr9_-_123476719_123476810	0.00447416	AUGGCUU	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr14_-_54908043_54908149	0.00439589	AUGGCUU	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr13_-_67804445_67804475	0.00431021	AUGGCUU	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr6_+_96463840_96463892	0.00407029	AUGGCUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr11_+_121322832_121322912	0.00404417	AUGGCUU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr1_+_15943995_15944014	0.00395987	AUGGCUU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr13_-_77460525_77460548	0.00389547	AUGGCUU	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr1_+_203595903_203595934	0.00375459	AUGGCUU	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chrX_-_18372792_18372847	0.00373268	AUGGCUU	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr17_-_37607497_37607539	0.00362389	AUGGCUU	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr20_-_48532019_48532045	0.00355744	AUGGCUU	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr15_+_72766651_72766680	0.00324998	AUGGCUU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_20208870_20209006	0.00304289	AUGGCUU	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr20_-_48330377_48330441	0.00301213	AUGGCUU	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chr16_+_28962128_28962335	0.00294748	AUGGCUU	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr22_-_37099555_37099603	0.00294662	AUGGCUU	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr3_-_12705600_12705725	0.00291627	AUGGCUU	ENST00000542177.1|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000442415.2|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000251849.4|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1
hg19_v2_chr7_+_16685756_16685820	0.0028833	AUGGCUU	ENST00000415365.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000258761.3|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000433922.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000452975.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000405202.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr9_+_108006880_108006943	0.00260472	AUGGCUU	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr17_-_1395954_1396106	0.00254552	AUGGCUU	ENST00000359786.5|MYO1C|ENSG00000197879.10|myosin IC
hg19_v2_chr2_-_172017343_172017391	0.00222631	AUGGCUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr7_-_558876_559046	0.00203836	AUGGCUU	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr10_+_25463951_25463991	0.00199585	AUGGCUU	ENST00000376351.3|GPR158|ENSG00000151025.9|G protein-coupled receptor 158
hg19_v2_chr10_-_128077024_128077055	0.00181386	AUGGCUU	ENST00000368679.4|ADAM12|ENSG00000148848.10|ADAM metallopeptidase domain 12 	ENST00000368676.4|ADAM12|ENSG00000148848.10|ADAM metallopeptidase domain 12 	ENST00000448723.1|ADAM12|ENSG00000148848.10|ADAM metallopeptidase domain 12
hg19_v2_chr1_-_166845515_166845564	0.00171512	AUGGCUU	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr20_-_3996036_3996153	0.00139294	AUGGCUU	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr2_-_107503558_107503580	0.00122276	AUGGCUU	ENST00000361686.4|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 	ENST00000409087.3|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v2_chr3_+_45636219_45636351	0.000947076	AUGGCUU	ENST00000273317.4|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chr10_+_120967072_120967101	0.000736005	AUGGCUU	ENST00000392870.2|GRK5|ENSG00000198873.10|G protein-coupled receptor kinase 5
hg19_v2_chr14_-_94254821_94254836	0.000694637	AUGGCUU	ENST00000393140.1|PRIMA1|ENSG00000175785.8|proline rich membrane anchor 1
hg19_v2_chr17_+_75136980_75137028	0.000571718	AUGGCUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr9_-_79520989_79521003	0.000498949	AUGGCUU	ENST00000376713.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000376718.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000428286.1|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila)
hg19_v2_chr20_-_443129_443207	0.000422024	AUGGCUU	ENST00000354200.4|TBC1D20|ENSG00000125875.9|TBC1 domain family, member 20
hg19_v2_chr7_+_6144514_6144614	0.000308444	AUGGCUU	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr17_-_9929581_9929626	0.000191017	AUGGCUU	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr8_+_64081118_64081131	0.000181919	AUGGCUU	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr1_+_171454659_171454723	0.000163351	AUGGCUU	ENST00000367742.3|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C 	ENST00000338920.4|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C
hg19_v2_chr12_+_101188547_101188585	0.000158986	AUGGCUU	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr12_-_111180644_111180744	0.000146671	AUGGCUU	ENST00000551676.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000550991.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000335007.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000340766.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme
hg19_v2_chr4_-_149365827_149365870	4.39559e-06	AUGGCUU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
