hg19_v2_chr10_+_126490354_126490395	0.531805	AUGGCAC	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr3_+_169940153_169940183	0.473442	AUGGCAC	ENST00000295797.4|PRKCI|ENSG00000163558.8|protein kinase C, iota
hg19_v2_chr12_-_76953284_76953341	0.430574	AUGGCAC	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr2_+_48541776_48541874	0.426154	AUGGCAC	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr8_+_26149007_26149061	0.421967	AUGGCAC	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr8_+_48920960_48921011	0.396886	AUGGCAC	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr1_+_185014496_185014518	0.396706	AUGGCAC	ENST00000367510.3|RNF2|ENSG00000121481.6|ring finger protein 2
hg19_v2_chr12_+_64798095_64798162	0.38863	AUGGCAC	ENST00000332707.5|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr5_+_137801160_137801179	0.385888	AUGGCAC	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr17_+_30813576_30813637	0.358036	AUGGCAC	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chr10_-_25012597_25012732	0.351619	AUGGCAC	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr2_+_30369807_30369847	0.344053	AUGGCAC	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chr6_-_159239257_159239274	0.340239	AUGGCAC	ENST00000337147.7|EZR|ENSG00000092820.13|ezrin 	ENST00000392177.4|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr15_-_35280426_35280503	0.33933	AUGGCAC	ENST00000559564.1|ZNF770|ENSG00000198146.4|zinc finger protein 770 	ENST00000356321.4|ZNF770|ENSG00000198146.4|zinc finger protein 770
hg19_v2_chr2_+_159313452_159313624	0.332625	AUGGCAC	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr9_-_102861267_102861322	0.329832	AUGGCAC	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr13_-_23949671_23949702	0.315856	AUGGCAC	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr14_+_53196872_53196959	0.305846	AUGGCAC	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr14_+_52118576_52118673	0.284653	AUGGCAC	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr11_-_82782861_82782949	0.279338	AUGGCAC	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr1_-_225840747_225840860	0.273624	AUGGCAC	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr15_-_65809581_65809617	0.273327	AUGGCAC	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr10_+_22610124_22610188	0.269372	AUGGCAC	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr15_-_52861394_52861436	0.260458	AUGGCAC	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr8_-_23712312_23712328	0.255416	AUGGCAC	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr8_-_30670384_30670394	0.253759	AUGGCAC	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr12_+_27396901_27397108	0.240741	AUGGCAC	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr5_+_61602055_61602083	0.239343	AUGGCAC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr5_+_157170703_157170758	0.231768	AUGGCAC	ENST00000286307.5|LSM11|ENSG00000155858.5|LSM11, U7 small nuclear RNA associated
hg19_v2_chr14_-_50999307_50999367	0.231023	AUGGCAC	ENST00000013125.4|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr9_-_114246635_114246676	0.224621	AUGGCAC	ENST00000338205.5|KIAA0368|ENSG00000136813.10|KIAA0368
hg19_v2_chr16_+_9185450_9185516	0.216599	AUGGCAC	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr10_+_70320413_70320413	0.210585	AUGGCAC	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr5_+_72251793_72251825	0.210474	AUGGCAC	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr1_-_94374946_94374994	0.208739	AUGGCAC	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr10_+_92980517_92980550	0.206902	AUGGCAC	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr18_-_47721447_47721474	0.205955	AUGGCAC	ENST00000285039.7|MYO5B|ENSG00000167306.14|myosin VB
hg19_v2_chr7_+_35840542_35840671	0.205207	AUGGCAC	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr10_-_75910789_75910821	0.201258	AUGGCAC	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr10_+_31608054_31608156	0.200504	AUGGCAC	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr6_-_130031358_130031378	0.199029	AUGGCAC	ENST00000368149.2|ARHGAP18|ENSG00000146376.6|Rho GTPase activating protein 18
hg19_v2_chr10_-_33246722_33246830	0.198399	AUGGCAC	ENST00000437302.1|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 	ENST00000396033.2|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v2_chr2_+_201676256_201676323	0.198354	AUGGCAC	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr14_-_45431091_45431175	0.189042	AUGGCAC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr7_+_39663061_39663082	0.188728	AUGGCAC	ENST00000005257.2|RALA|ENSG00000006451.3|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v2_chr5_-_59189545_59189625	0.188214	AUGGCAC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_-_169863016_169863109	0.187685	AUGGCAC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr13_-_31736027_31736064	0.182322	AUGGCAC	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr6_+_111195973_111195994	0.179322	AUGGCAC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr3_-_72496035_72496069	0.178925	AUGGCAC	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr2_-_222436988_222437031	0.176525	AUGGCAC	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chrX_-_131352152_131352204	0.174091	AUGGCAC	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr6_+_64345698_64345750	0.169025	AUGGCAC	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr10_-_114206649_114206688	0.165782	AUGGCAC	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr20_-_524455_524466	0.165369	AUGGCAC	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr15_-_35047166_35047204	0.162942	AUGGCAC	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr9_-_16870704_16870841	0.161536	AUGGCAC	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr12_-_42632016_42632089	0.16135	AUGGCAC	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr14_+_36295504_36295580	0.159946	AUGGCAC	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr3_+_171758344_171758358	0.159027	AUGGCAC	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr2_+_42396472_42396563	0.155406	AUGGCAC	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr7_-_8301869_8301911	0.154403	AUGGCAC	ENST00000402384.3|ICA1|ENSG00000003147.13|islet cell autoantigen 1, 69kDa
hg19_v2_chr1_-_154155595_154155673	0.148889	AUGGCAC	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr2_-_157189180_157189290	0.147699	AUGGCAC	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr8_+_41348072_41348112	0.146044	AUGGCAC	ENST00000405786.2|GOLGA7|ENSG00000147533.12|golgin A7
hg19_v2_chr5_+_138678131_138678169	0.143832	AUGGCAC	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr15_-_75744014_75744087	0.143012	AUGGCAC	ENST00000394947.3|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000565264.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr14_+_102228123_102228237	0.141099	AUGGCAC	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr15_-_72612470_72612529	0.13893	AUGGCAC	ENST00000287202.5|CELF6|ENSG00000140488.10|CUGBP, Elav-like family member 6
hg19_v2_chr2_-_183903133_183903210	0.138373	AUGGCAC	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr20_+_13976015_13976171	0.138243	AUGGCAC	ENST00000217246.4|MACROD2|ENSG00000172264.12|MACRO domain containing 2
hg19_v2_chr8_+_6565854_6565942	0.13816	AUGGCAC	ENST00000285518.6|AGPAT5|ENSG00000155189.7|1-acylglycerol-3-phosphate O-acyltransferase 5
hg19_v2_chr15_-_90645679_90645753	0.137265	AUGGCAC	ENST00000539790.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000559482.1|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial 	ENST00000330062.3|IDH2|ENSG00000182054.5|isocitrate dehydrogenase 2 (NADP+), mitochondrial
hg19_v2_chr12_+_72148614_72148699	0.136803	AUGGCAC	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr7_-_16685422_16685448	0.134106	AUGGCAC	ENST00000306999.2|ANKMY2|ENSG00000106524.4|ankyrin repeat and MYND domain containing 2
hg19_v2_chr15_+_77223960_77223994	0.133994	AUGGCAC	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr3_+_152017181_152017229	0.133623	AUGGCAC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr18_+_67956135_67956144	0.133467	AUGGCAC	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr1_-_207224307_207224422	0.132128	AUGGCAC	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr3_-_33481835_33481905	0.13072	AUGGCAC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr2_+_179345173_179345221	0.126025	AUGGCAC	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr1_+_24829384_24829443	0.125506	AUGGCAC	ENST00000374395.4|RCAN3|ENSG00000117602.7|RCAN family member 3 	ENST00000436717.2|RCAN3|ENSG00000117602.7|RCAN family member 3
hg19_v2_chr1_-_84972248_84972271	0.124852	AUGGCAC	ENST00000370645.4|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5 	ENST00000370641.3|GNG5|ENSG00000174021.6|guanine nucleotide binding protein (G protein), gamma 5
hg19_v2_chr10_+_114709999_114710031	0.124539	AUGGCAC	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr2_+_79740118_79740210	0.122711	AUGGCAC	ENST00000496558.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2 	ENST00000451966.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2
hg19_v2_chr1_+_181452678_181452716	0.121931	AUGGCAC	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr4_-_129208940_129208976	0.119856	AUGGCAC	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr5_-_139726181_139726216	0.118184	AUGGCAC	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr4_+_88928777_88928822	0.117994	AUGGCAC	ENST00000237596.2|PKD2|ENSG00000118762.3|polycystic kidney disease 2 (autosomal dominant)
hg19_v2_chr13_+_20532807_20532841	0.117905	AUGGCAC	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chrX_-_20284958_20285039	0.117797	AUGGCAC	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr1_+_25071848_25071944	0.11688	AUGGCAC	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr1_-_1822495_1822571	0.11651	AUGGCAC	ENST00000378609.4|GNB1|ENSG00000078369.13|guanine nucleotide binding protein (G protein), beta polypeptide 1
hg19_v2_chr11_+_18344106_18344143	0.11629	AUGGCAC	ENST00000534641.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000525831.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000265963.4|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa
hg19_v2_chr20_-_14318248_14318264	0.11586	AUGGCAC	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr5_+_134181625_134181713	0.114291	AUGGCAC	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr2_-_55920952_55921045	0.114108	AUGGCAC	ENST00000447944.2|PNPT1|ENSG00000138035.10|polyribonucleotide nucleotidyltransferase 1
hg19_v2_chr1_+_78470530_78470551	0.113096	AUGGCAC	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr15_+_57210818_57210930	0.112648	AUGGCAC	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr4_+_172734548_172734654	0.111664	AUGGCAC	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr13_-_41240717_41240735	0.109672	AUGGCAC	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr5_+_142149955_142150000	0.109471	AUGGCAC	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr8_+_26240414_26240631	0.108907	AUGGCAC	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr5_-_64064508_64064529	0.107668	AUGGCAC	ENST00000513458.4|SREK1IP1|ENSG00000153006.10|SREK1-interacting protein 1
hg19_v2_chr3_-_100120223_100120301	0.105509	AUGGCAC	ENST00000284320.5|TOMM70A|ENSG00000154174.7|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)
hg19_v2_chr5_-_137911049_137911133	0.105306	AUGGCAC	ENST00000297185.3|HSPA9|ENSG00000113013.8|heat shock 70kDa protein 9 (mortalin)
hg19_v2_chr6_+_87865262_87865339	0.104831	AUGGCAC	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr12_+_79258547_79258607	0.103855	AUGGCAC	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr4_+_26862400_26862416	0.103793	AUGGCAC	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr2_+_106361333_106361520	0.102801	AUGGCAC	ENST00000233154.4|NCK2|ENSG00000071051.9|NCK adaptor protein 2 	ENST00000451463.2|NCK2|ENSG00000071051.9|NCK adaptor protein 2
hg19_v2_chr18_+_29671812_29671892	0.100762	AUGGCAC	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr5_+_118407053_118407239	0.0999789	AUGGCAC	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr14_+_105886150_105886229	0.0999368	AUGGCAC	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr11_-_77532050_77532066	0.0999186	AUGGCAC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr14_+_79745746_79745762	0.0994919	AUGGCAC	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr3_+_130569429_130569479	0.098553	AUGGCAC	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr2_+_231577532_231577639	0.0974597	AUGGCAC	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr7_-_111846435_111846471	0.0967058	AUGGCAC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr5_-_114961858_114961876	0.0965623	AUGGCAC	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr1_-_68299130_68299160	0.0955341	AUGGCAC	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr3_+_140660634_140660729	0.0946651	AUGGCAC	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr1_+_193091080_193091222	0.0942651	AUGGCAC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr1_-_235491462_235491534	0.09141	AUGGCAC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr2_+_204192942_204193038	0.0911728	AUGGCAC	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chrX_+_41192595_41192651	0.0901959	AUGGCAC	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr9_-_80646374_80646374	0.0897246	AUGGCAC	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr15_-_44486632_44486664	0.0894301	AUGGCAC	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr4_+_79697495_79697538	0.0884343	AUGGCAC	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr8_+_110346546_110346619	0.0875589	AUGGCAC	ENST00000521662.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000521688.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000520147.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila)
hg19_v2_chr3_+_150804676_150804697	0.0858158	AUGGCAC	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr10_-_52383644_52383743	0.0822557	AUGGCAC	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr2_-_176032843_176032941	0.0813389	AUGGCAC	ENST00000392544.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409499.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000426833.3|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000392543.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000538946.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000487334.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409833.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409635.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000264110.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000345739.5|ATF2|ENSG00000115966.12|activating transcription factor 2
hg19_v2_chr14_-_82000140_82000229	0.0804173	AUGGCAC	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr9_+_96793076_96793128	0.0782533	AUGGCAC	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chr6_+_163835669_163835693	0.0773865	AUGGCAC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr9_-_135819987_135820020	0.0770529	AUGGCAC	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr1_+_27719148_27719184	0.0763404	AUGGCAC	ENST00000374024.3|GPR3|ENSG00000181773.6|G protein-coupled receptor 3
hg19_v2_chr12_-_95044309_95044390	0.0759729	AUGGCAC	ENST00000261226.4|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr14_-_91282726_91282804	0.0753352	AUGGCAC	ENST00000328459.6|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B 	ENST00000357056.2|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B
hg19_v2_chr19_-_33555780_33555801	0.0752133	AUGGCAC	ENST00000254260.3|RHPN2|ENSG00000131941.3|rhophilin, Rho GTPase binding protein 2 	ENST00000400226.4|RHPN2|ENSG00000131941.3|rhophilin, Rho GTPase binding protein 2
hg19_v2_chr5_-_168006591_168006638	0.0739548	AUGGCAC	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr11_+_125439298_125439385	0.0735806	AUGGCAC	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chr5_+_151151471_151151496	0.0725576	AUGGCAC	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr9_-_3525968_3526016	0.0711546	AUGGCAC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr15_-_83316254_83316368	0.0706612	AUGGCAC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr16_+_57406368_57406392	0.0706519	AUGGCAC	ENST00000006053.6|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1 	ENST00000563383.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr4_+_148538517_148538592	0.0701757	AUGGCAC	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr4_-_187644930_187645017	0.0700231	AUGGCAC	ENST00000441802.2|FAT1|ENSG00000083857.9|FAT atypical cadherin 1
hg19_v2_chr5_-_132299313_132299334	0.069158	AUGGCAC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr16_+_19179549_19179622	0.069122	AUGGCAC	ENST00000355377.2|SYT17|ENSG00000103528.12|synaptotagmin XVII 	ENST00000568115.1|SYT17|ENSG00000103528.12|synaptotagmin XVII
hg19_v2_chrX_+_16964794_16964861	0.0663277	AUGGCAC	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr6_+_161412759_161412846	0.0654574	AUGGCAC	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr11_+_125034586_125034604	0.0634561	AUGGCAC	ENST00000298282.9|PKNOX2|ENSG00000165495.11|PBX/knotted 1 homeobox 2
hg19_v2_chr12_+_93771659_93771710	0.0626951	AUGGCAC	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr12_+_19282643_19282710	0.0622302	AUGGCAC	ENST00000317589.4|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000355397.3|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000359180.3|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000309364.4|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000540972.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000429027.2|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr1_+_180601139_180601180	0.0615953	AUGGCAC	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr3_-_149688896_149688970	0.0615599	AUGGCAC	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr13_+_76123883_76123949	0.060772	AUGGCAC	ENST00000377595.3|UCHL3|ENSG00000118939.13|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
hg19_v2_chr8_+_98656336_98656535	0.0591878	AUGGCAC	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr2_+_192542850_192542872	0.0585826	AUGGCAC	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chrX_-_15353629_15353684	0.0575911	AUGGCAC	ENST00000333590.4|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A 	ENST00000428964.1|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A 	ENST00000542278.1|PIGA|ENSG00000165195.9|phosphatidylinositol glycan anchor biosynthesis, class A
hg19_v2_chr9_+_35161998_35162101	0.0573651	AUGGCAC	ENST00000396787.1|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans) 	ENST00000378495.3|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans) 	ENST00000378496.4|UNC13B|ENSG00000198722.8|unc-13 homolog B (C. elegans)
hg19_v2_chr9_+_33025209_33025279	0.0564793	AUGGCAC	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr8_-_4852218_4852246	0.0562336	AUGGCAC	ENST00000400186.3|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1 	ENST00000602723.1|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1
hg19_v2_chr1_-_115259337_115259515	0.055926	AUGGCAC	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr2_+_139259324_139259389	0.0551321	AUGGCAC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr7_+_138145076_138145116	0.0549787	AUGGCAC	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr6_+_88182643_88182722	0.0545475	AUGGCAC	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr1_+_215256467_215256622	0.0530555	AUGGCAC	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr8_+_42010464_42010662	0.0525154	AUGGCAC	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr3_+_37903432_37903475	0.05249	AUGGCAC	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr17_-_62207485_62207511	0.0522619	AUGGCAC	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chr2_+_148602058_148602185	0.0522023	AUGGCAC	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr6_+_151561085_151561146	0.0517195	AUGGCAC	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr15_+_38544476_38544574	0.0495789	AUGGCAC	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr7_+_155089486_155089599	0.0492161	AUGGCAC	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr7_-_17980091_17980136	0.049083	AUGGCAC	ENST00000409389.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000409604.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000428135.3|SNX13|ENSG00000071189.17|sorting nexin 13
hg19_v2_chr4_-_175750364_175750465	0.0470348	AUGGCAC	ENST00000340217.5|GLRA3|ENSG00000145451.8|glycine receptor, alpha 3 	ENST00000274093.3|GLRA3|ENSG00000145451.8|glycine receptor, alpha 3
hg19_v2_chr7_-_72936531_72936602	0.0450362	AUGGCAC	ENST00000339594.4|BAZ1B|ENSG00000009954.6|bromodomain adjacent to zinc finger domain, 1B
hg19_v2_chr9_+_129622904_129622956	0.0443859	AUGGCAC	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr13_+_42622781_42622889	0.0420714	AUGGCAC	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr1_-_57889687_57889754	0.0375158	AUGGCAC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr15_+_64388166_64388225	0.0374383	AUGGCAC	ENST00000353874.4|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000261889.5|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000559844.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000561026.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000558040.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr15_+_63334831_63335087	0.034921	AUGGCAC	ENST00000288398.6|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000358278.3|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000560445.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000403994.3|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000357980.4|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000559556.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000559397.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000267996.7|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha) 	ENST00000560970.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha)
hg19_v2_chr9_+_115513003_115513137	0.0345502	AUGGCAC	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr8_+_32405728_32405749	0.0342986	AUGGCAC	ENST00000523079.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000338921.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000356819.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000287845.5|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000341377.5|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr11_-_62572901_62572964	0.0341602	AUGGCAC	ENST00000439713.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531131.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000530875.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531709.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000294172.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1
hg19_v2_chr13_+_41363581_41363633	0.0333694	AUGGCAC	ENST00000338625.4|SLC25A15|ENSG00000102743.10|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
hg19_v2_chr19_-_47975417_47975441	0.0324634	AUGGCAC	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr5_+_68462837_68462876	0.0320369	AUGGCAC	ENST00000256442.5|CCNB1|ENSG00000134057.10|cyclin B1
hg19_v2_chr4_-_78740511_78740544	0.0306146	AUGGCAC	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr6_-_132834184_132834337	0.0296366	AUGGCAC	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr7_-_71801980_71802013	0.0294604	AUGGCAC	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr12_+_49761224_49761259	0.0287486	AUGGCAC	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr4_+_170541660_170541677	0.0277388	AUGGCAC	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr5_-_142783175_142783297	0.0275419	AUGGCAC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr2_-_100106419_100106522	0.0265351	AUGGCAC	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr18_+_19321281_19321334	0.025838	AUGGCAC	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr12_+_67663056_67663067	0.0255412	AUGGCAC	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr5_+_96271141_96271168	0.0244306	AUGGCAC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr2_-_128643496_128643496	0.0243159	AUGGCAC	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chrX_-_20134990_20135060	0.0240735	AUGGCAC	ENST00000379651.3|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2 	ENST00000443379.3|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2 	ENST00000379643.5|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2
hg19_v2_chr1_+_174769006_174769070	0.0235654	AUGGCAC	ENST00000489615.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr3_+_183353356_183353450	0.0231303	AUGGCAC	ENST00000242810.6|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000493074.1|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000437402.1|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000454495.2|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000473045.1|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000468101.1|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000427201.2|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000482138.1|KLHL24|ENSG00000114796.11|kelch-like family member 24 	ENST00000454652.2|KLHL24|ENSG00000114796.11|kelch-like family member 24
hg19_v2_chr16_-_80838195_80838228	0.0230806	AUGGCAC	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr6_-_94129244_94129284	0.0207646	AUGGCAC	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr6_-_52926539_52926668	0.0206215	AUGGCAC	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr3_-_196230590_196230677	0.0205017	AUGGCAC	ENST00000318037.3|RNF168|ENSG00000163961.4|ring finger protein 168, E3 ubiquitin protein ligase
hg19_v2_chr17_+_20059302_20059342	0.01959	AUGGCAC	ENST00000395530.2|SPECC1|ENSG00000128487.12|sperm antigen with calponin homology and coiled-coil domains 1
hg19_v2_chr12_-_12419703_12419811	0.0192534	AUGGCAC	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr3_-_160283348_160283376	0.0187509	AUGGCAC	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr8_-_93115445_93115462	0.0181603	AUGGCAC	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr1_+_203595903_203595934	0.0178041	AUGGCAC	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr1_-_236767779_236767836	0.0173676	AUGGCAC	ENST00000366579.1|HEATR1|ENSG00000119285.6|HEAT repeat containing 1 	ENST00000366582.3|HEATR1|ENSG00000119285.6|HEAT repeat containing 1 	ENST00000366581.2|HEATR1|ENSG00000119285.6|HEAT repeat containing 1
hg19_v2_chr10_-_113943447_113943536	0.0169629	AUGGCAC	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr21_-_27945562_27945618	0.0169609	AUGGCAC	ENST00000299340.4|CYYR1|ENSG00000166265.7|cysteine/tyrosine-rich 1 	ENST00000435845.2|CYYR1|ENSG00000166265.7|cysteine/tyrosine-rich 1
hg19_v2_chr20_-_5591626_5591677	0.0169384	AUGGCAC	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr6_+_53659746_53659817	0.0160406	AUGGCAC	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chrX_-_11445856_11445943	0.0154873	AUGGCAC	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr2_+_206547215_206547232	0.0154816	AUGGCAC	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr17_+_73043301_73043347	0.0153002	AUGGCAC	ENST00000322444.6|KCTD2|ENSG00000180901.6|potassium channel tetramerization domain containing 2
hg19_v2_chr2_+_32390925_32390941	0.0151156	AUGGCAC	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chr11_+_111945011_111945069	0.0146509	AUGGCAC	ENST00000532163.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000280352.9|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000530104.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000526879.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000393047.3|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000525785.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57
hg19_v2_chr17_+_56833184_56833249	0.0141715	AUGGCAC	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr10_+_64893039_64893128	0.0141412	AUGGCAC	ENST00000277746.6|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2 	ENST00000435510.2|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2
hg19_v2_chr17_-_58603568_58603610	0.0140197	AUGGCAC	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr9_+_82186872_82186898	0.0138532	AUGGCAC	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr9_+_108006880_108006943	0.0125802	AUGGCAC	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr12_+_69864129_69864222	0.012402	AUGGCAC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr17_-_60142609_60142657	0.0122902	AUGGCAC	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr3_-_164913777_164913790	0.0118666	AUGGCAC	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr6_+_125283566_125283691	0.0113532	AUGGCAC	ENST00000521654.2|RNF217|ENSG00000146373.12|ring finger protein 217
hg19_v2_chr7_-_86688990_86689026	0.0111609	AUGGCAC	ENST00000450689.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr19_+_7459998_7460046	0.0107463	AUGGCAC	ENST00000319670.9|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18 	ENST00000599752.1|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v2_chr5_-_32174369_32174458	0.0107451	AUGGCAC	ENST00000265070.6|GOLPH3|ENSG00000113384.9|golgi phosphoprotein 3 (coat-protein)
hg19_v2_chr9_-_95432536_95432560	0.0103123	AUGGCAC	ENST00000287996.3|IPPK|ENSG00000127080.5|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
hg19_v2_chr1_-_93257951_93257981	0.0102662	AUGGCAC	ENST00000543509.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000370331.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5 	ENST00000540033.1|EVI5|ENSG00000067208.10|ecotropic viral integration site 5
hg19_v2_chr20_-_39928705_39928740	0.0101989	AUGGCAC	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr11_-_35440796_35440916	0.0093444	AUGGCAC	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr2_+_173600671_173600709	0.00902234	AUGGCAC	ENST00000409036.1|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr11_-_47198380_47198448	0.00824371	AUGGCAC	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr13_+_22245522_22245676	0.00769875	AUGGCAC	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr14_+_55518349_55518423	0.00756264	AUGGCAC	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr6_-_105585022_105585112	0.00675748	AUGGCAC	ENST00000314641.5|BVES|ENSG00000112276.9|blood vessel epicardial substance
hg19_v2_chr8_+_99076509_99076539	0.00669553	AUGGCAC	ENST00000318528.3|C8orf47|ENSG00000177459.6|chromosome 8 open reading frame 47
hg19_v2_chr8_-_57123815_57123867	0.005004	AUGGCAC	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr6_+_80341000_80341025	0.00445369	AUGGCAC	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr9_-_98279241_98279339	0.00405525	AUGGCAC	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr11_+_18230727_18230755	0.00363652	AUGGCAC	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr5_-_127873659_127873735	0.0035498	AUGGCAC	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr21_+_47878757_47879024	0.0029784	AUGGCAC	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr1_+_244227632_244227632	0.00238445	AUGGCAC	ENST00000598000.1|AL590483.1|ENSG00000268146.1|Uncharacterized protein; cDNA FLJ42623 fis, clone BRACE3015894
hg19_v2_chr3_+_152552685_152552736	0.00212265	AUGGCAC	ENST00000305097.3|P2RY1|ENSG00000169860.4|purinergic receptor P2Y, G-protein coupled, 1
hg19_v2_chr2_-_161350305_161350391	0.00182231	AUGGCAC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr9_-_107690420_107690518	0.00143136	AUGGCAC	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr15_-_64648273_64648442	0.000846274	AUGGCAC	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
