hg19_v2_chr10_+_18948311_18948417	0.0125855	AUGACAC	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr18_-_54305658_54305876	0.00808431	AUGACAC	ENST00000586262.1|TXNL1|ENSG00000091164.8|thioredoxin-like 1 	ENST00000217515.6|TXNL1|ENSG00000091164.8|thioredoxin-like 1
hg19_v2_chrX_-_119694538_119694555	0.00766697	AUGACAC	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr5_+_77656339_77656362	0.0066225	AUGACAC	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr17_-_65362678_65362743	0.00595207	AUGACAC	ENST00000357146.4|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENST00000356126.3|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
hg19_v2_chr15_+_59063478_59063561	0.00526857	AUGACAC	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr18_-_45456930_45456970	0.00501251	AUGACAC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr13_-_107187462_107187462	0.00497579	AUGACAC	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr1_-_85156216_85156240	0.00434692	AUGACAC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr6_-_137113604_137113666	0.00423246	AUGACAC	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr9_-_102861267_102861322	0.00411699	AUGACAC	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr3_-_150481164_150481179	0.00409189	AUGACAC	ENST00000312960.3|SIAH2|ENSG00000181788.3|siah E3 ubiquitin protein ligase 2
hg19_v2_chr11_-_77532050_77532066	0.00404088	AUGACAC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr2_+_208394616_208394655	0.00400177	AUGACAC	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr12_+_2986359_2986421	0.00344657	AUGACAC	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr1_+_51701924_51702001	0.00343811	AUGACAC	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr7_-_92219698_92219713	0.0034199	AUGACAC	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr15_-_35261996_35262040	0.00329688	AUGACAC	ENST00000156471.5|AQR|ENSG00000021776.6|aquarius intron-binding spliceosomal factor
hg19_v2_chr10_-_75910789_75910821	0.00321919	AUGACAC	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr6_-_86352642_86352709	0.00313782	AUGACAC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr9_-_16870704_16870841	0.002766	AUGACAC	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chrX_-_39956656_39956751	0.00276399	AUGACAC	ENST00000397354.3|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378444.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr14_-_91976488_91976661	0.00270199	AUGACAC	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr15_-_27018175_27018241	0.00256571	AUGACAC	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr15_-_48937982_48938046	0.00253107	AUGACAC	ENST00000316623.5|FBN1|ENSG00000166147.9|fibrillin 1
hg19_v2_chr6_+_44355257_44355315	0.00248152	AUGACAC	ENST00000371477.3|CDC5L|ENSG00000096401.7|cell division cycle 5-like
hg19_v2_chr5_-_107717058_107717155	0.00235345	AUGACAC	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr7_-_158380465_158380523	0.00232444	AUGACAC	ENST00000389413.3|PTPRN2|ENSG00000155093.13|protein tyrosine phosphatase, receptor type, N polypeptide 2 	ENST00000409483.1|PTPRN2|ENSG00000155093.13|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg19_v2_chr3_-_57678772_57678838	0.00206147	AUGACAC	ENST00000311128.5|DENND6A|ENSG00000174839.8|DENN/MADD domain containing 6A
hg19_v2_chr6_-_136610911_136610990	0.00191678	AUGACAC	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chrX_-_73834449_73834481	0.00164353	AUGACAC	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr2_+_114647504_114647557	0.00151585	AUGACAC	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr5_-_132299313_132299334	0.00148146	AUGACAC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr15_-_83316254_83316368	0.00148087	AUGACAC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr2_+_173940442_173940625	0.00135246	AUGACAC	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr17_+_67410832_67410871	0.00117304	AUGACAC	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr1_+_237205476_237205505	0.00111341	AUGACAC	ENST00000366574.2|RYR2|ENSG00000198626.11|ryanodine receptor 2 (cardiac)
hg19_v2_chr1_+_111991474_111991558	0.00106252	AUGACAC	ENST00000369722.3|ATP5F1|ENSG00000116459.6|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v2_chr9_-_86323118_86323164	0.000930999	AUGACAC	ENST00000376395.4|UBQLN1|ENSG00000135018.9|ubiquilin 1
hg19_v2_chr5_+_135468516_135468621	0.000922518	AUGACAC	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr4_-_170192185_170192256	0.000878332	AUGACAC	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chrX_-_118699325_118699397	0.000837653	AUGACAC	ENST00000320339.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000371594.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000536133.1|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56
hg19_v2_chr2_-_25194963_25194976	0.000752999	AUGACAC	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr16_+_50187556_50187779	0.000682903	AUGACAC	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr5_+_141348598_141348626	0.00060615	AUGACAC	ENST00000394520.2|RNF14|ENSG00000013561.13|ring finger protein 14 	ENST00000347642.3|RNF14|ENSG00000013561.13|ring finger protein 14
hg19_v2_chr4_+_144434584_144434709	0.00058025	AUGACAC	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr15_+_72766651_72766680	0.000556036	AUGACAC	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr14_-_35182994_35183034	0.000494518	AUGACAC	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr3_-_125094093_125094198	0.000429507	AUGACAC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr1_-_19283163_19283180	0.000354854	AUGACAC	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr20_-_20693131_20693268	0.000315699	AUGACAC	ENST00000202677.7|RALGAPA2|ENSG00000188559.9|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg19_v2_chr13_+_22245522_22245676	0.000250453	AUGACAC	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr3_-_186080012_186080030	0.000171635	AUGACAC	ENST00000544847.1|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa 	ENST00000265022.3|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa
