hg19_v2_chr18_-_56985873_56985887	0.277651	AIRE	ENST00000299721.3|CPLX4|ENSG00000166569.4|complexin 4
hg19_v2_chrX_-_139866723_139866723	0.258126	AIRE	ENST00000370532.2|CDR1|ENSG00000184258.5|cerebellar degeneration-related protein 1, 34kDa
hg19_v2_chr12_+_52643077_52643093	0.216783	AIRE	ENST00000553310.2|KRT86|ENSG00000170442.7|keratin 86 	ENST00000544024.1|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chr19_-_52552051_52552113	0.214229	AIRE	ENST00000221315.5|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chr6_-_33864684_33864698	0.212734	AIRE	ENST00000506222.2|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016 	ENST00000533304.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016
hg19_v2_chr5_+_667759_667759	0.196379	AIRE	ENST00000594226.1|AC026740.1|ENSG00000268885.1|Uncharacterized protein
hg19_v2_chr14_-_75330537_75330537	0.169623	AIRE	ENST00000556084.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000556489.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000445876.1|PROX2|ENSG00000119608.8|prospero homeobox 2
hg19_v2_chr12_+_75874580_75874661	0.162704	AIRE	ENST00000456650.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr19_-_52551814_52552023	0.16214	AIRE	ENST00000594154.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000598745.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000597273.1|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chr2_+_38177575_38177612	0.158409	AIRE	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr22_-_32767017_32767063	0.155509	AIRE	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr7_-_64023441_64023484	0.15404	AIRE	ENST00000309683.6|ZNF680|ENSG00000173041.7|zinc finger protein 680
hg19_v2_chr19_-_23869970_23869991	0.136608	AIRE	ENST00000601010.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr18_-_37380230_37380283	0.134837	AIRE	ENST00000591629.1|LINC00669|ENSG00000267374.1|long intergenic non-protein coding RNA 669
hg19_v2_chr19_-_23869999_23870022	0.133779	AIRE	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr6_+_22221010_22221034	0.128852	AIRE	ENST00000567753.1|RP11-524C21.2|ENSG00000261568.1|RP11-524C21.2
hg19_v2_chr19_-_16606988_16607003	0.127202	AIRE	ENST00000269881.3|CALR3|ENSG00000269058.1|calreticulin 3
hg19_v2_chr15_-_52043722_52043782	0.126467	AIRE	ENST00000454181.2|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v2_chr15_-_52043631_52043657	0.117786	AIRE	ENST00000558126.1|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v2_chr15_+_27112948_27113033	0.109041	AIRE	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr21_+_30502806_30502989	0.106919	AIRE	ENST00000399928.1|MAP3K7CL|ENSG00000156265.11|MAP3K7 C-terminal like 	ENST00000399926.1|MAP3K7CL|ENSG00000156265.11|MAP3K7 C-terminal like
hg19_v2_chr1_+_165864821_165864850	0.106534	AIRE	ENST00000470820.1|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr16_-_20566616_20566616	0.0999419	AIRE	ENST00000569163.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr16_+_75182376_75182480	0.0995828	AIRE	ENST00000570010.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000568079.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000464850.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000332307.4|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000393430.2|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein
hg19_v2_chr4_-_88450612_88450656	0.0960367	AIRE	ENST00000418378.1|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin) 	ENST00000282470.6|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin)
hg19_v2_chr10_+_90660832_90660832	0.0957084	AIRE	ENST00000371924.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr22_+_42017987_42018029	0.0902324	AIRE	ENST00000405506.1|XRCC6|ENSG00000196419.8|X-ray repair complementing defective repair in Chinese hamster cells 6
hg19_v2_chr6_-_31514333_31514414	0.0888968	AIRE	ENST00000376151.4|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr10_+_115511213_115511272	0.0854941	AIRE	ENST00000361048.1|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr19_-_48753028_48753043	0.0830454	AIRE	ENST00000522431.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr9_+_42717234_42717234	0.0829037	AIRE	ENST00000377590.1|FOXD4L2|ENSG00000204828.2|forkhead box D4-like 2
hg19_v2_chr2_+_62423242_62423288	0.0796223	AIRE	ENST00000301998.4|B3GNT2|ENSG00000170340.10|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
hg19_v2_chr4_-_4544061_4544075	0.073917	AIRE	ENST00000507908.1|STX18|ENSG00000168818.5|syntaxin 18
hg19_v2_chr5_+_122181279_122181321	0.0729632	AIRE	ENST00000395451.4|SNX24|ENSG00000064652.6|sorting nexin 24 	ENST00000506996.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr5_+_122181184_122181213	0.0728298	AIRE	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr9_-_114361665_114361719	0.0714249	AIRE	ENST00000309195.5|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr4_+_71587669_71587752	0.0699364	AIRE	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr2_+_172864490_172864490	0.0690663	AIRE	ENST00000315796.4|METAP1D|ENSG00000172878.9|methionyl aminopeptidase type 1D (mitochondrial)
hg19_v2_chr12_+_20963647_20963666	0.0681237	AIRE	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr4_-_104119528_104119570	0.0668523	AIRE	ENST00000380026.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000503705.1|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000265148.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa
hg19_v2_chr9_-_70429731_70429731	0.0654779	AIRE	ENST00000377413.1|FOXD4L4|ENSG00000184659.4|forkhead box D4-like 4
hg19_v2_chr15_-_38519066_38519111	0.0651935	AIRE	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chr9_-_70178815_70178815	0.0646233	AIRE	ENST00000377420.1|FOXD4L5|ENSG00000204779.2|forkhead box D4-like 5
hg19_v2_chr15_+_85523671_85523747	0.0638397	AIRE	ENST00000310298.4|PDE8A|ENSG00000073417.10|phosphodiesterase 8A 	ENST00000557957.1|PDE8A|ENSG00000073417.10|phosphodiesterase 8A
hg19_v2_chr3_+_140981456_140981508	0.06304	AIRE	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr14_+_39944025_39944139	0.0613464	AIRE	ENST00000554328.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000556620.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000557197.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1
hg19_v2_chr10_+_127661942_127662084	0.0581261	AIRE	ENST00000417114.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000445510.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000368691.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1
hg19_v2_chr10_-_69597810_69597827	0.0581084	AIRE	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr2_-_127977654_127977654	0.0567417	AIRE	ENST00000409327.1|CYP27C1|ENSG00000186684.8|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v2_chr12_+_4758264_4758314	0.0564872	AIRE	ENST00000266544.5|NDUFA9|ENSG00000139180.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
hg19_v2_chr8_+_124780672_124780764	0.0553171	AIRE	ENST00000521166.1|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1 	ENST00000334705.7|FAM91A1|ENSG00000176853.11|family with sequence similarity 91, member A1
hg19_v2_chr2_-_198540719_198540748	0.0548392	AIRE	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr1_+_174670143_174670160	0.0546896	AIRE	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr9_-_104198042_104198105	0.05442	AIRE	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr8_+_128748308_128748330	0.0541939	AIRE	ENST00000377970.2|MYC|ENSG00000136997.10|v-myc avian myelocytomatosis viral oncogene homolog
hg19_v2_chr8_+_104384616_104384661	0.0541597	AIRE	ENST00000520337.1|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr6_+_168434678_168434678	0.0534402	AIRE	ENST00000496008.1|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr9_-_95298254_95298282	0.0490999	AIRE	ENST00000444490.2|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr5_+_118690466_118690505	0.0490677	AIRE	ENST00000503646.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr15_+_52043758_52043809	0.0490273	AIRE	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chrX_-_102941596_102941746	0.0489362	AIRE	ENST00000441076.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422355.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000442614.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422154.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000451301.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr13_-_26795840_26795995	0.0480608	AIRE	ENST00000381570.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000399762.2|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6 	ENST00000346166.3|RNF6|ENSG00000127870.12|ring finger protein (C3H2C3 type) 6
hg19_v2_chr16_-_31147020_31147083	0.0471607	AIRE	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr6_-_106773610_106773700	0.0471552	AIRE	ENST00000369076.3|ATG5|ENSG00000057663.8|autophagy related 5 	ENST00000369070.1|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr10_-_101841588_101841634	0.0470342	AIRE	ENST00000370418.3|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr12_+_10658489_10658489	0.0469388	AIRE	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr10_+_115511434_115511454	0.046051	AIRE	ENST00000369312.4|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr2_+_179316163_179316163	0.0457167	AIRE	ENST00000409117.3|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr12_+_75874984_75875053	0.0453492	AIRE	ENST00000550491.1|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr3_-_121468602_121468617	0.0451583	AIRE	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chrM_+_12331_12348	0.0450427	AIRE	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr1_-_145826450_145826450	0.0444506	AIRE	ENST00000462900.2|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chr12_-_76462713_76462773	0.0440479	AIRE	ENST00000552056.1|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr4_+_71588372_71588404	0.0434455	AIRE	ENST00000536664.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr7_-_64467031_64467043	0.0423811	AIRE	ENST00000394323.2|ERV3-1|ENSG00000213462.4|endogenous retrovirus group 3, member 1
hg19_v2_chr1_+_36038971_36038971	0.041833	AIRE	ENST00000373235.3|TFAP2E|ENSG00000116819.6|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
hg19_v2_chr4_+_76649797_76650004	0.0415302	AIRE	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr14_-_55658252_55658321	0.0411359	AIRE	ENST00000395425.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chrM_+_5824_5904	0.0391418	AIRE	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr11_+_64794991_64795020	0.0388934	AIRE	ENST00000352068.5|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000525648.1|SNX15|ENSG00000110025.8|sorting nexin 15
hg19_v2_chr20_+_21284416_21284490	0.0386031	AIRE	ENST00000539513.1|XRN2|ENSG00000088930.6|5'-3' exoribonuclease 2
hg19_v2_chr7_-_137028498_137028520	0.038545	AIRE	ENST00000393083.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr7_-_137028534_137028611	0.0381797	AIRE	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr5_+_122181128_122181144	0.0375773	AIRE	ENST00000261369.4|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr18_-_56985776_56985815	0.0372875	AIRE	ENST00000587244.1|CPLX4|ENSG00000166569.4|complexin 4
hg19_v2_chr14_+_45605157_45605186	0.037195	AIRE	ENST00000542564.2|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr6_+_26104104_26104169	0.0363807	AIRE	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr6_+_118869452_118869475	0.0357254	AIRE	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr4_-_47465666_47465736	0.0352288	AIRE	ENST00000381571.4|COMMD8|ENSG00000169019.9|COMM domain containing 8
hg19_v2_chr17_+_77030267_77030391	0.0351547	AIRE	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr1_-_52344471_52344481	0.035104	AIRE	ENST00000352171.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase) 	ENST00000354831.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr12_+_75874460_75874549	0.0339243	AIRE	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr3_-_133648656_133648656	0.0327877	AIRE	ENST00000408895.2|C3orf36|ENSG00000221972.2|chromosome 3 open reading frame 36
hg19_v2_chr9_-_25678856_25678856	0.0327798	AIRE	ENST00000358022.3|TUSC1|ENSG00000198680.3|tumor suppressor candidate 1
hg19_v2_chr19_-_48752812_48752925	0.0326357	AIRE	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr20_+_44036900_44036984	0.0326105	AIRE	ENST00000443296.1|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr14_-_55658323_55658396	0.0322458	AIRE	ENST00000554067.1|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5 	ENST00000247191.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chr9_-_114362093_114362138	0.0321235	AIRE	ENST00000538962.1|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000407693.2|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000238248.3|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr17_+_3323862_3323862	0.0320006	AIRE	ENST00000291231.1|OR3A3|ENSG00000159961.1|olfactory receptor, family 3, subfamily A, member 3
hg19_v2_chr3_-_121468513_121468599	0.0319858	AIRE	ENST00000494517.1|GOLGB1|ENSG00000173230.11|golgin B1 	ENST00000393667.3|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr1_-_52344416_52344427	0.031503	AIRE	ENST00000544028.1|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr8_-_141774467_141774622	0.0305521	AIRE	ENST00000520151.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519024.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519465.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr2_-_136633940_136634022	0.0304347	AIRE	ENST00000264156.2|MCM6|ENSG00000076003.4|minichromosome maintenance complex component 6
hg19_v2_chrX_-_139047669_139047684	0.0302126	AIRE	ENST00000370540.1|CXorf66|ENSG00000203933.2|chromosome X open reading frame 66
hg19_v2_chr19_-_48753104_48753123	0.0301464	AIRE	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr4_+_78829479_78829479	0.0299583	AIRE	ENST00000504901.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr22_+_25202232_25202286	0.0296616	AIRE	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr6_+_26538566_26538647	0.0296542	AIRE	ENST00000377575.2|HMGN4|ENSG00000182952.4|high mobility group nucleosomal binding domain 4
hg19_v2_chr1_+_47603109_47603127	0.0291621	AIRE	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chr7_-_87936195_87936223	0.0289811	AIRE	ENST00000414498.1|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000301959.5|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000380079.4|STEAP4|ENSG00000127954.8|STEAP family member 4
hg19_v2_chr14_-_65409438_65409479	0.0288153	AIRE	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr17_+_41857793_41857814	0.0286152	AIRE	ENST00000449302.3|C17orf105|ENSG00000231256.3|chromosome 17 open reading frame 105
hg19_v2_chr2_-_166810261_166810353	0.0282985	AIRE	ENST00000243344.7|TTC21B|ENSG00000123607.10|tetratricopeptide repeat domain 21B
hg19_v2_chr16_-_89119355_89119388	0.0282744	AIRE	ENST00000537498.1|CTD-2555A7.2|ENSG00000256982.1|CTD-2555A7.2
hg19_v2_chr22_+_40322623_40322646	0.0278964	AIRE	ENST00000399090.2|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr22_+_40322595_40322618	0.027759	AIRE	ENST00000420971.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000544756.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr1_-_154600421_154600480	0.0246996	AIRE	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr5_+_141488070_141488094	0.0240586	AIRE	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr13_+_50570019_50570028	0.0239645	AIRE	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr12_-_64784471_64784503	0.023403	AIRE	ENST00000333722.5|C12orf56|ENSG00000185306.8|chromosome 12 open reading frame 56
hg19_v2_chr6_+_42584847_42584878	0.0228991	AIRE	ENST00000372883.3|UBR2|ENSG00000024048.6|ubiquitin protein ligase E3 component n-recognin 2
hg19_v2_chr2_-_225811747_225811796	0.0222291	AIRE	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr14_+_45605127_45605155	0.0220163	AIRE	ENST00000556036.1|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M 	ENST00000267430.5|FANCM|ENSG00000187790.6|Fanconi anemia, complementation group M
hg19_v2_chr1_-_35497506_35497574	0.0216553	AIRE	ENST00000317538.5|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000373340.2|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000357182.4|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6
hg19_v2_chr6_+_116937636_116937787	0.0209986	AIRE	ENST00000368581.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000229554.5|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000368580.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas)
hg19_v2_chr16_+_50059125_50059180	0.0206302	AIRE	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr3_-_121264848_121264859	0.0205297	AIRE	ENST00000264233.5|POLQ|ENSG00000051341.9|polymerase (DNA directed), theta
hg19_v2_chr2_-_202508169_202508263	0.0204146	AIRE	ENST00000409883.2|TMEM237|ENSG00000155755.14|transmembrane protein 237
hg19_v2_chr4_-_114682719_114682746	0.0192445	AIRE	ENST00000394522.3|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chrM_+_14741_14767	0.0183121	AIRE	ENST00000361789.2|MT-CYB|ENSG00000198727.2|mitochondrially encoded cytochrome b
hg19_v2_chr11_-_119249805_119249830	0.0179838	AIRE	ENST00000527843.1|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr12_-_59175485_59175529	0.0176249	AIRE	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr1_+_207669573_207669606	0.0176103	AIRE	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr1_+_207669613_207669686	0.0174714	AIRE	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr19_+_45417921_45417970	0.01745	AIRE	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr2_+_204732487_204732521	0.0170696	AIRE	ENST00000302823.3|CTLA4|ENSG00000163599.10|cytotoxic T-lymphocyte-associated protein 4
hg19_v2_chr4_+_1385340_1385340	0.0161501	AIRE	ENST00000324803.4|CRIPAK|ENSG00000179979.7|cysteine-rich PAK1 inhibitor
hg19_v2_chr4_-_66536057_66536071	0.0154114	AIRE	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr19_+_11708259_11708309	0.0143735	AIRE	ENST00000587939.1|ZNF627|ENSG00000198551.5|zinc finger protein 627 	ENST00000588174.1|ZNF627|ENSG00000198551.5|zinc finger protein 627
hg19_v2_chr16_+_14802801_14802801	0.0139994	AIRE	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr6_+_167525277_167525295	0.0131682	AIRE	ENST00000400926.2|CCR6|ENSG00000112486.10|chemokine (C-C motif) receptor 6
hg19_v2_chrM_+_8366_8398	0.0121266	AIRE	ENST00000361851.1|MT-ATP8|ENSG00000228253.1|mitochondrially encoded ATP synthase 8
hg19_v2_chr12_-_50677255_50677329	0.0120557	AIRE	ENST00000551691.1|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1 	ENST00000394943.3|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1 	ENST00000341247.4|LIMA1|ENSG00000050405.9|LIM domain and actin binding 1
hg19_v2_chr1_+_100810575_100810584	0.0117422	AIRE	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr19_-_36304201_36304201	0.0115985	AIRE	ENST00000301175.3|PRODH2|ENSG00000250799.5|proline dehydrogenase (oxidase) 2
hg19_v2_chr10_-_4720333_4720350	0.0104137	AIRE	ENST00000430998.2|LINC00704|ENSG00000231298.2|long intergenic non-protein coding RNA 704
hg19_v2_chr9_-_113761720_113761756	0.0102951	AIRE	ENST00000541779.1|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1 	ENST00000374430.2|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr13_+_111893533_111893591	0.0097403	AIRE	ENST00000478679.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr6_-_149806105_149806197	0.00954606	AIRE	ENST00000389942.5|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000416573.2|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000542614.1|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000409806.3|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D
hg19_v2_chr21_+_39644395_39644454	0.00883783	AIRE	ENST00000398934.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr8_-_141728444_141728461	0.00793557	AIRE	ENST00000521562.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr1_-_167883327_167883352	0.00772447	AIRE	ENST00000476818.2|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367851.4|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367848.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr21_+_39644214_39644219	0.00689941	AIRE	ENST00000438657.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr1_-_52456352_52456436	0.00649768	AIRE	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr9_+_71986182_71986182	0.00620631	AIRE	ENST00000303068.7|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr3_+_189507460_189507471	0.00504954	AIRE	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr21_+_39644172_39644185	0.00479101	AIRE	ENST00000398932.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr20_+_44036620_44036658	0.00454372	AIRE	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr4_-_66536196_66536216	0.00425807	AIRE	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr2_+_234686976_234686976	0.0038019	AIRE	ENST00000389758.3|MROH2A|ENSG00000185038.10|maestro heat-like repeat family member 2A
hg19_v2_chr17_+_36452989_36453152	0.00363182	AIRE	ENST00000312513.5|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45 	ENST00000582535.1|MRPL45|ENSG00000174100.5|mitochondrial ribosomal protein L45
hg19_v2_chr5_+_72143988_72144011	0.0031222	AIRE	ENST00000506351.2|TNPO1|ENSG00000083312.13|transportin 1
hg19_v2_chr6_+_42141029_42141080	0.00229038	AIRE	ENST00000372958.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina)
hg19_v2_chr4_-_17513851_17513862	0.000624953	AIRE	ENST00000281243.5|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr21_+_39644305_39644351	0.000181449	AIRE	ENST00000398930.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
