hg19_v2_chr3_+_20081515_20081570	0.0539935	AGUGGUU	ENST00000263754.4|KAT2B|ENSG00000114166.7|K(lysine) acetyltransferase 2B
hg19_v2_chrX_-_83442915_83442985	0.0521713	AGUGGUU	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr7_+_39663061_39663082	0.0493384	AGUGGUU	ENST00000005257.2|RALA|ENSG00000006451.3|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v2_chr20_+_32250079_32250090	0.0446065	AGUGGUU	ENST00000375222.3|C20orf144|ENSG00000149609.5|chromosome 20 open reading frame 144
hg19_v2_chrX_-_77395186_77395203	0.0397868	AGUGGUU	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr8_-_99837856_99837955	0.039094	AGUGGUU	ENST00000518165.1|STK3|ENSG00000104375.11|serine/threonine kinase 3 	ENST00000419617.2|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr5_+_122110691_122110898	0.0389101	AGUGGUU	ENST00000379516.2|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000505934.1|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000514949.1|SNX2|ENSG00000205302.2|sorting nexin 2
hg19_v2_chr2_-_37193606_37193633	0.0378655	AGUGGUU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr21_+_30671189_30671207	0.0367778	AGUGGUU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr7_-_120498357_120498456	0.0349181	AGUGGUU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr2_+_54014168_54014220	0.0337983	AGUGGUU	ENST00000405123.3|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1 	ENST00000185150.4|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1 	ENST00000378239.5|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1
hg19_v2_chr10_+_70091812_70091832	0.0337145	AGUGGUU	ENST00000265866.7|HNRNPH3|ENSG00000096746.13|heterogeneous nuclear ribonucleoprotein H3 (2H9)
hg19_v2_chr18_+_9136758_9136852	0.0324574	AGUGGUU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr9_-_100935043_100935166	0.0323749	AGUGGUU	ENST00000343933.5|CORO2A|ENSG00000106789.8|coronin, actin binding protein, 2A
hg19_v2_chr12_-_51566592_51566695	0.0318044	AGUGGUU	ENST00000257915.5|TFCP2|ENSG00000135457.5|transcription factor CP2 	ENST00000548115.1|TFCP2|ENSG00000135457.5|transcription factor CP2
hg19_v2_chr17_+_46908350_46908418	0.0317338	AGUGGUU	ENST00000258947.3|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000509507.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000448105.2|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000570513.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000509415.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000513119.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000416445.2|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000508679.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000505071.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2
hg19_v2_chr10_+_126490354_126490395	0.0311045	AGUGGUU	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr11_+_9406169_9406210	0.0309783	AGUGGUU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr16_+_67596310_67596353	0.0307803	AGUGGUU	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr20_-_48770174_48770243	0.0303475	AGUGGUU	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr5_+_14581884_14581960	0.0302177	AGUGGUU	ENST00000274217.3|FAM105A|ENSG00000145569.5|family with sequence similarity 105, member A
hg19_v2_chr15_+_52043758_52043809	0.0301946	AGUGGUU	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr6_+_149068464_149068559	0.0267196	AGUGGUU	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr18_-_34409116_34409158	0.0261669	AGUGGUU	ENST00000334295.4|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr14_+_37667118_37667192	0.0260424	AGUGGUU	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr5_+_72251793_72251825	0.0260253	AGUGGUU	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr12_+_69004619_69004699	0.025507	AGUGGUU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr1_-_33338076_33338105	0.0246536	AGUGGUU	ENST00000496770.1|FNDC5|ENSG00000160097.11|fibronectin type III domain containing 5
hg19_v2_chr17_-_33416231_33416338	0.0234943	AGUGGUU	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr11_-_102323489_102323576	0.0233086	AGUGGUU	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr6_-_90062543_90062567	0.0230474	AGUGGUU	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr1_+_171810606_171810649	0.022851	AGUGGUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr7_-_32931387_32931509	0.0224676	AGUGGUU	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr8_-_124286735_124286773	0.0220806	AGUGGUU	ENST00000395571.3|ZHX1|ENSG00000165156.10|zinc fingers and homeoboxes 1
hg19_v2_chr17_-_27621125_27621143	0.0219887	AGUGGUU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr14_-_55878538_55878576	0.0219325	AGUGGUU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr2_+_208394616_208394655	0.0216584	AGUGGUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr8_-_80680078_80680101	0.0215161	AGUGGUU	ENST00000337919.5|HEY1|ENSG00000164683.12|hes-related family bHLH transcription factor with YRPW motif 1 	ENST00000354724.3|HEY1|ENSG00000164683.12|hes-related family bHLH transcription factor with YRPW motif 1
hg19_v2_chr3_+_180630090_180630311	0.0212676	AGUGGUU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr2_+_48541776_48541874	0.0211768	AGUGGUU	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr1_+_78470530_78470551	0.0210223	AGUGGUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr1_-_20812690_20812763	0.0208928	AGUGGUU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr3_+_196295482_196295559	0.0206689	AGUGGUU	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chr1_-_205719295_205719404	0.0204099	AGUGGUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr18_-_45456930_45456970	0.0203474	AGUGGUU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr22_+_19118321_19118321	0.0201218	AGUGGUU	ENST00000399635.2|TSSK2|ENSG00000206203.3|testis-specific serine kinase 2
hg19_v2_chr3_-_52713729_52713784	0.0198098	AGUGGUU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr2_-_178128528_178128574	0.0198046	AGUGGUU	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chrX_+_37208521_37208539	0.0197564	AGUGGUU	ENST00000378628.4|PRRG1|ENSG00000130962.13|proline rich Gla (G-carboxyglutamic acid) 1
hg19_v2_chr5_-_16936340_16936418	0.0197221	AGUGGUU	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr8_+_38854418_38854514	0.0193593	AGUGGUU	ENST00000481513.1|ADAM9|ENSG00000168615.7|ADAM metallopeptidase domain 9 	ENST00000487273.2|ADAM9|ENSG00000168615.7|ADAM metallopeptidase domain 9
hg19_v2_chr12_+_107168342_107168393	0.0191642	AGUGGUU	ENST00000392837.4|RIC8B|ENSG00000111785.14|RIC8 guanine nucleotide exchange factor B
hg19_v2_chr2_-_160472952_160473080	0.0190921	AGUGGUU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr22_-_36784035_36784063	0.0190763	AGUGGUU	ENST00000216181.5|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr2_-_183903133_183903210	0.0188495	AGUGGUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr3_-_196159268_196159345	0.0187132	AGUGGUU	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chr14_+_70078303_70078321	0.0186804	AGUGGUU	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr1_+_100503643_100503677	0.0185129	AGUGGUU	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr3_+_196594727_196594816	0.0183464	AGUGGUU	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr17_-_53499310_53499353	0.0182968	AGUGGUU	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr3_+_32147997_32148009	0.0182043	AGUGGUU	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr1_+_178694300_178694346	0.0180539	AGUGGUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr9_+_112810878_112810985	0.0178124	AGUGGUU	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr14_-_82000140_82000229	0.0173698	AGUGGUU	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr1_+_182992545_182992630	0.0166051	AGUGGUU	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr7_-_30029367_30029474	0.0164736	AGUGGUU	ENST00000242059.5|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chr11_-_31839488_31839515	0.0163362	AGUGGUU	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr8_-_103425047_103425069	0.0160728	AGUGGUU	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr20_-_48729670_48729694	0.0152912	AGUGGUU	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr1_+_52870227_52870243	0.0152638	AGUGGUU	ENST00000257181.9|PRPF38A|ENSG00000134748.12|pre-mRNA processing factor 38A
hg19_v2_chr1_-_197169672_197169672	0.0152587	AGUGGUU	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr3_+_134204881_134204913	0.0151557	AGUGGUU	ENST00000511574.1|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000337090.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000383229.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa
hg19_v2_chr4_+_79697495_79697538	0.0151313	AGUGGUU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr1_+_26348259_26348276	0.0148968	AGUGGUU	ENST00000374280.3|EXTL1|ENSG00000158008.5|exostosin-like glycosyltransferase 1
hg19_v2_chr9_+_112542572_112542590	0.0147092	AGUGGUU	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr4_+_39046615_39046680	0.0144267	AGUGGUU	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chrX_-_20284958_20285039	0.0143341	AGUGGUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr10_+_98592009_98592061	0.0140963	AGUGGUU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr4_+_128703295_128703496	0.0140498	AGUGGUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr4_+_57774042_57774114	0.0136556	AGUGGUU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr1_-_173991434_173991556	0.0134283	AGUGGUU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr10_+_60272814_60272900	0.013388	AGUGGUU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr12_-_56583332_56583369	0.0131976	AGUGGUU	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr1_-_68299130_68299160	0.0131871	AGUGGUU	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr21_-_15755446_15755508	0.0131154	AGUGGUU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr5_-_56247935_56247959	0.0129069	AGUGGUU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr17_+_18218587_18218624	0.012784	AGUGGUU	ENST00000406438.3|SMCR8|ENSG00000176994.9|Smith-Magenis syndrome chromosome region, candidate 8
hg19_v2_chr6_-_82462425_82462491	0.012449	AGUGGUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr1_+_197881592_197881635	0.0121371	AGUGGUU	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr7_-_79082867_79082900	0.011817	AGUGGUU	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr15_-_34502278_34502318	0.0116712	AGUGGUU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr2_+_26256938_26257031	0.0116113	AGUGGUU	ENST00000264710.4|RAB10|ENSG00000084733.6|RAB10, member RAS oncogene family
hg19_v2_chr14_+_96000930_96001053	0.0114602	AGUGGUU	ENST00000331334.4|GLRX5|ENSG00000182512.4|glutaredoxin 5
hg19_v2_chr12_+_45609893_45609909	0.0113261	AGUGGUU	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr1_-_182361327_182361345	0.0112732	AGUGGUU	ENST00000331872.6|GLUL|ENSG00000135821.12|glutamate-ammonia ligase 	ENST00000311223.5|GLUL|ENSG00000135821.12|glutamate-ammonia ligase
hg19_v2_chr2_+_242255275_242255286	0.0111541	AGUGGUU	ENST00000391971.2|SEPT2|ENSG00000168385.13|septin 2
hg19_v2_chr4_+_124320665_124320702	0.0110263	AGUGGUU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr2_+_208576355_208576475	0.010744	AGUGGUU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr15_-_30114622_30114706	0.0107052	AGUGGUU	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr13_-_77900814_77900935	0.0105248	AGUGGUU	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr9_+_101867359_101867376	0.0104799	AGUGGUU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr15_-_48937982_48938046	0.0104659	AGUGGUU	ENST00000316623.5|FBN1|ENSG00000166147.9|fibrillin 1
hg19_v2_chr8_-_66754172_66754201	0.0101921	AGUGGUU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr17_-_33448468_33448513	0.0101612	AGUGGUU	ENST00000591723.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein  	ENST00000587405.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000593039.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein
hg19_v2_chr14_-_74485960_74486035	0.0099921	AGUGGUU	ENST00000556242.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5 	ENST00000334696.6|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr2_-_225450013_225450068	0.00995864	AGUGGUU	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr6_+_57037089_57037146	0.0097429	AGUGGUU	ENST00000370693.5|BAG2|ENSG00000112208.10|BCL2-associated athanogene 2
hg19_v2_chr17_-_41977964_41978013	0.00960872	AGUGGUU	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr6_-_99395787_99395878	0.00954693	AGUGGUU	ENST00000369244.2|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4 	ENST00000229971.1|FBXL4|ENSG00000112234.4|F-box and leucine-rich repeat protein 4
hg19_v2_chr7_+_91875508_91875559	0.00856768	AGUGGUU	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chr7_-_44924939_44924993	0.00855526	AGUGGUU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr2_-_37384175_37384208	0.00852792	AGUGGUU	ENST00000411537.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000233057.4|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000395127.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000390013.3|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2
hg19_v2_chr9_-_107690420_107690518	0.00837086	AGUGGUU	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr20_+_19997948_19998034	0.00825974	AGUGGUU	ENST00000310450.4|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENST00000398602.2|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit
hg19_v2_chr19_-_51523275_51523312	0.0082516	AGUGGUU	ENST00000309958.3|KLK10|ENSG00000129451.7|kallikrein-related peptidase 10
hg19_v2_chr2_-_217560248_217560278	0.00792575	AGUGGUU	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr2_-_240322643_240322661	0.00787068	AGUGGUU	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr18_-_57027194_57027194	0.00785191	AGUGGUU	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr8_+_26435359_26435426	0.00777349	AGUGGUU	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr8_-_67579418_67579498	0.00768361	AGUGGUU	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr5_-_34916871_34916871	0.00766027	AGUGGUU	ENST00000382038.2|RAD1|ENSG00000113456.14|RAD1 homolog (S. pombe)
hg19_v2_chr9_+_5629025_5629119	0.00764116	AGUGGUU	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr7_-_75988321_75988348	0.00755723	AGUGGUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr7_-_98741642_98741713	0.00745931	AGUGGUU	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_82266053_82266082	0.00743693	AGUGGUU	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr10_+_60028818_60028891	0.00722769	AGUGGUU	ENST00000333926.5|CISD1|ENSG00000122873.7|CDGSH iron sulfur domain 1
hg19_v2_chr15_-_83876758_83876770	0.0072232	AGUGGUU	ENST00000299633.4|HDGFRP3|ENSG00000166503.4|Hepatoma-derived growth factor-related protein 3
hg19_v2_chr1_+_161736072_161736093	0.00722227	AGUGGUU	ENST00000367942.3|ATF6|ENSG00000118217.5|activating transcription factor 6
hg19_v2_chr17_-_16395455_16395467	0.00722225	AGUGGUU	ENST00000409083.3|FAM211A|ENSG00000181350.7|family with sequence similarity 211, member A
hg19_v2_chr3_+_139654018_139654039	0.00701088	AGUGGUU	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chrX_-_119603138_119603220	0.00700538	AGUGGUU	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr5_+_32711419_32711540	0.0069417	AGUGGUU	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chrX_-_70288234_70288291	0.00674501	AGUGGUU	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr4_+_155665123_155665158	0.00662597	AGUGGUU	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr4_-_174451370_174451387	0.00658065	AGUGGUU	ENST00000359562.4|HAND2|ENSG00000164107.7|heart and neural crest derivatives expressed 2
hg19_v2_chr2_+_32582086_32582106	0.00653961	AGUGGUU	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chr10_-_3827417_3827473	0.00649025	AGUGGUU	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr13_+_113344542_113344643	0.00633583	AGUGGUU	ENST00000487903.1|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000375630.2|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000375645.3|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000283558.8|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A
hg19_v2_chr2_+_179059365_179059376	0.00626059	AGUGGUU	ENST00000190611.4|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chrX_-_72299258_72299351	0.00602035	AGUGGUU	ENST00000453389.1|PABPC1L2A|ENSG00000186288.4|poly(A) binding protein, cytoplasmic 1-like 2A 	ENST00000373519.1|PABPC1L2A|ENSG00000186288.4|poly(A) binding protein, cytoplasmic 1-like 2A
hg19_v2_chr8_+_28747884_28747938	0.0058763	AGUGGUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr7_+_128379346_128379447	0.00577766	AGUGGUU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr22_-_32146106_32146141	0.005759	AGUGGUU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chr20_-_48770244_48770335	0.0057408	AGUGGUU	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr4_+_55095264_55095390	0.00566275	AGUGGUU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr9_+_129677039_129677119	0.00564808	AGUGGUU	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr12_-_96794143_96794264	0.00553329	AGUGGUU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr20_+_60697480_60697583	0.00553105	AGUGGUU	ENST00000370915.1|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000253001.4|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000400318.2|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279068.6|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279069.7|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr20_-_4804244_4804293	0.00539485	AGUGGUU	ENST00000379400.3|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr1_-_173886491_173886516	0.00530681	AGUGGUU	ENST00000367698.3|SERPINC1|ENSG00000117601.9|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v2_chr5_-_127873659_127873735	0.00523642	AGUGGUU	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr5_-_53606396_53606431	0.00491699	AGUGGUU	ENST00000504924.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000507646.2|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000502271.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15
hg19_v2_chrX_-_73834449_73834481	0.00490954	AGUGGUU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr3_-_56502375_56502428	0.00482678	AGUGGUU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr17_-_38020392_38020477	0.004822	AGUGGUU	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr15_-_56757329_56757342	0.00459217	AGUGGUU	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr17_+_36508111_36508128	0.00456139	AGUGGUU	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr4_-_152147579_152147750	0.00440742	AGUGGUU	ENST00000304527.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000455740.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000424281.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000409598.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr10_+_1095416_1095482	0.00406698	AGUGGUU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr3_-_149688896_149688970	0.00399804	AGUGGUU	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr6_-_108395907_108395971	0.00390437	AGUGGUU	ENST00000193322.3|OSTM1|ENSG00000081087.10|osteopetrosis associated transmembrane protein 1
hg19_v2_chr6_-_110500905_110500921	0.00388572	AGUGGUU	ENST00000392587.2|WASF1|ENSG00000112290.8|WAS protein family, member 1
hg19_v2_chr19_+_48972459_48972490	0.00380982	AGUGGUU	ENST00000427476.1|CYTH2|ENSG00000105443.9|cytohesin 2
hg19_v2_chr2_+_64751433_64751472	0.00375427	AGUGGUU	ENST00000238856.4|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000422803.1|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000238855.7|AFTPH|ENSG00000119844.10|aftiphilin
hg19_v2_chr1_+_64239657_64239724	0.00368673	AGUGGUU	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chrX_-_63425561_63425624	0.00361158	AGUGGUU	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr13_+_22245522_22245676	0.00355441	AGUGGUU	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr5_-_168006591_168006638	0.00351049	AGUGGUU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr12_+_67663056_67663067	0.00333906	AGUGGUU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr17_+_38219063_38219154	0.00333626	AGUGGUU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chrX_+_133507327_133507386	0.00330721	AGUGGUU	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr1_-_202858227_202858283	0.00318613	AGUGGUU	ENST00000367262.3|RABIF|ENSG00000183155.4|RAB interacting factor
hg19_v2_chr1_+_87380299_87380475	0.00285668	AGUGGUU	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr4_-_85887503_85887544	0.00278813	AGUGGUU	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr6_+_43737939_43737956	0.00263252	AGUGGUU	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr15_-_23086394_23086457	0.00263199	AGUGGUU	ENST00000337435.4|NIPA1|ENSG00000170113.11|non imprinted in Prader-Willi/Angelman syndrome 1
hg19_v2_chr5_-_89825328_89825422	0.00253267	AGUGGUU	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr13_+_42622781_42622889	0.00218397	AGUGGUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr7_-_117513540_117513587	0.00208345	AGUGGUU	ENST00000160373.3|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr7_-_42276612_42276782	0.00199749	AGUGGUU	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr2_+_202316392_202316519	0.00198821	AGUGGUU	ENST00000194530.3|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta 	ENST00000392249.2|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta
hg19_v2_chr15_-_56535464_56535521	0.00187302	AGUGGUU	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr4_-_146859623_146859669	0.00186665	AGUGGUU	ENST00000379448.4|ZNF827|ENSG00000151612.11|zinc finger protein 827 	ENST00000513320.1|ZNF827|ENSG00000151612.11|zinc finger protein 827
hg19_v2_chr4_+_78978724_78978764	0.00177347	AGUGGUU	ENST00000325942.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1 	ENST00000264895.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1 	ENST00000264899.6|FRAS1|ENSG00000138759.13|Fraser syndrome 1
hg19_v2_chr9_-_115095883_115095947	0.00163299	AGUGGUU	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr5_+_138629417_138629467	0.00158999	AGUGGUU	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr15_-_52970820_52970960	0.00149068	AGUGGUU	ENST00000261844.7|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000399202.4|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000562135.1|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr15_+_81071684_81071719	0.00142003	AGUGGUU	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr9_+_132815985_132816018	0.00137806	AGUGGUU	ENST00000372410.3|GPR107|ENSG00000148358.15|G protein-coupled receptor 107
hg19_v2_chr13_-_25746416_25746433	0.00130164	AGUGGUU	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr17_-_60142609_60142657	0.00121939	AGUGGUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr20_-_46415297_46415334	0.00105724	AGUGGUU	ENST00000467815.1|SULF2|ENSG00000196562.10|sulfatase 2 	ENST00000359930.4|SULF2|ENSG00000196562.10|sulfatase 2
hg19_v2_chr8_-_95961578_95961639	0.00104194	AGUGGUU	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr1_+_25664408_25664408	0.00102975	AGUGGUU	ENST00000374358.4|TMEM50A|ENSG00000183726.6|transmembrane protein 50A
hg19_v2_chr7_-_139876812_139876860	0.000972687	AGUGGUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr3_-_46037299_46037337	0.000941563	AGUGGUU	ENST00000296137.2|FYCO1|ENSG00000163820.10|FYVE and coiled-coil domain containing 1
hg19_v2_chr15_+_38544476_38544574	0.00059419	AGUGGUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr22_-_22221900_22221970	0.00048916	AGUGGUU	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr4_+_174292058_174292130	0.000458967	AGUGGUU	ENST00000296504.3|SAP30|ENSG00000164105.3|Sin3A-associated protein, 30kDa
hg19_v2_chr3_+_57741957_57742045	0.000444646	AGUGGUU	ENST00000295951.3|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr5_-_131347306_131347371	0.000287651	AGUGGUU	ENST00000296869.4|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379249.3|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379272.2|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379264.2|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr3_-_124774802_124774852	0.000245438	AGUGGUU	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr15_+_91073111_91073191	0.000164261	AGUGGUU	ENST00000420329.2|CRTC3|ENSG00000140577.11|CREB regulated transcription coactivator 3
hg19_v2_chr17_+_40932610_40932696	5.94934e-05	AGUGGUU	ENST00000246914.5|WNK4|ENSG00000126562.12|WNK lysine deficient protein kinase 4
