hg19_v2_chr17_+_68165657_68165688	0.403991	AGGUAGU	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr4_+_113066552_113066563	0.279721	AGGUAGU	ENST00000309733.5|C4orf32|ENSG00000174749.5|chromosome 4 open reading frame 32
hg19_v2_chr12_-_93323013_93323112	0.244823	AGGUAGU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr14_-_34931458_34931562	0.229516	AGGUAGU	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr12_-_69326940_69326993	0.179518	AGGUAGU	ENST00000549781.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000548262.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000551568.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000548954.1|CPM|ENSG00000135678.7|carboxypeptidase M
hg19_v2_chr10_+_180987_181009	0.168181	AGGUAGU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr3_+_159557637_159557650	0.165996	AGGUAGU	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr1_+_193091080_193091222	0.165852	AGGUAGU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr1_+_60280458_60280546	0.162898	AGGUAGU	ENST00000455990.1|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1 	ENST00000371208.3|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1
hg19_v2_chr3_-_120003941_120004083	0.161315	AGGUAGU	ENST00000464295.1|GPR156|ENSG00000175697.6|G protein-coupled receptor 156
hg19_v2_chr15_+_52043758_52043809	0.150955	AGGUAGU	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr8_-_82754427_82754539	0.141567	AGGUAGU	ENST00000353788.4|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000520618.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000518183.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000396330.2|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000519119.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000345957.4|SNX16|ENSG00000104497.9|sorting nexin 16
hg19_v2_chr20_-_32700075_32700138	0.137895	AGGUAGU	ENST00000374980.2|EIF2S2|ENSG00000125977.6|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg19_v2_chr12_+_54402790_54402832	0.132608	AGGUAGU	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr8_+_37594130_37594169	0.131805	AGGUAGU	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr2_+_109335929_109336002	0.129614	AGGUAGU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr3_+_110790590_110790603	0.129246	AGGUAGU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr1_-_115259337_115259515	0.127874	AGGUAGU	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr3_-_28390581_28390618	0.127748	AGGUAGU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr12_+_66217911_66218018	0.1257	AGGUAGU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr19_+_32836499_32836625	0.117188	AGGUAGU	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr12_+_12870055_12870119	0.11569	AGGUAGU	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr9_-_125693757_125693818	0.114578	AGGUAGU	ENST00000373656.3|ZBTB26|ENSG00000171448.8|zinc finger and BTB domain containing 26
hg19_v2_chrX_+_95939711_95939786	0.113746	AGGUAGU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr17_+_30771279_30771536	0.111305	AGGUAGU	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chr7_-_27205136_27205164	0.10949	AGGUAGU	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr2_-_39664405_39664453	0.107928	AGGUAGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr5_-_131132614_131132648	0.104869	AGGUAGU	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr1_-_207224307_207224422	0.102349	AGGUAGU	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr13_+_97874574_97874609	0.101009	AGGUAGU	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr12_-_29534074_29534127	0.100888	AGGUAGU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr3_+_196295482_196295559	0.0972267	AGGUAGU	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chr9_-_16870704_16870841	0.0971519	AGGUAGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr18_-_18691739_18691812	0.0969273	AGGUAGU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr8_+_22102626_22102748	0.0954331	AGGUAGU	ENST00000519237.1|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa 	ENST00000397802.4|POLR3D|ENSG00000168495.8|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
hg19_v2_chr20_+_49348081_49348096	0.0946421	AGGUAGU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr21_+_30671189_30671207	0.0928245	AGGUAGU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr3_+_184097836_184097861	0.0896596	AGGUAGU	ENST00000204604.1|CHRD|ENSG00000090539.11|chordin 	ENST00000310236.3|CHRD|ENSG00000090539.11|chordin
hg19_v2_chr14_+_55493920_55494013	0.0893236	AGGUAGU	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr9_+_19408999_19409057	0.0888375	AGGUAGU	ENST00000340967.2|ACER2|ENSG00000177076.4|alkaline ceramidase 2
hg19_v2_chr9_+_99212403_99212536	0.0886176	AGGUAGU	ENST00000375251.3|HABP4|ENSG00000130956.9|hyaluronan binding protein 4 	ENST00000375249.4|HABP4|ENSG00000130956.9|hyaluronan binding protein 4
hg19_v2_chr1_-_51984908_51984952	0.0860597	AGGUAGU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr9_+_125026882_125026952	0.0831596	AGGUAGU	ENST00000297908.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000373730.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000546115.1|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor 	ENST00000344641.3|MRRF|ENSG00000148187.13|mitochondrial ribosome recycling factor
hg19_v2_chr14_+_90863327_90863356	0.0816521	AGGUAGU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr1_+_26737253_26737269	0.0815955	AGGUAGU	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr2_+_170590321_170590408	0.0807092	AGGUAGU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr18_+_21032781_21032795	0.0785842	AGGUAGU	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr12_-_76478686_76478813	0.0779735	AGGUAGU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr8_+_92082424_92082597	0.0769811	AGGUAGU	ENST00000285420.4|OTUD6B|ENSG00000155100.6|OTU domain containing 6B 	ENST00000404789.3|OTUD6B|ENSG00000155100.6|OTU domain containing 6B
hg19_v2_chr7_-_75368248_75368265	0.0762309	AGGUAGU	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr14_-_88459503_88459615	0.0751077	AGGUAGU	ENST00000393568.4|GALC|ENSG00000054983.12|galactosylceramidase 	ENST00000261304.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr1_+_113615794_113615884	0.0731253	AGGUAGU	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr15_+_45879321_45879438	0.0708181	AGGUAGU	ENST00000220531.3|BLOC1S6|ENSG00000104164.6|biogenesis of lysosomal organelles complex-1, subunit 6, pallidin 	ENST00000567461.1|BLOC1S6|ENSG00000104164.6|biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
hg19_v2_chr7_+_94023873_94023873	0.0703068	AGGUAGU	ENST00000297268.6|COL1A2|ENSG00000164692.13|collagen, type I, alpha 2
hg19_v2_chr6_-_86352642_86352709	0.0659001	AGGUAGU	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr15_+_38544476_38544574	0.06538	AGGUAGU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr7_+_94285637_94285689	0.0652025	AGGUAGU	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr15_-_38856836_38857029	0.0650781	AGGUAGU	ENST00000450598.2|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000559830.1|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000558164.1|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated) 	ENST00000310803.5|RASGRP1|ENSG00000172575.7|RAS guanyl releasing protein 1 (calcium and DAG-regulated)
hg19_v2_chr4_-_18023350_18023499	0.0637312	AGGUAGU	ENST00000539056.1|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like 	ENST00000382226.5|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like 	ENST00000326877.4|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like
hg19_v2_chr3_-_69435224_69435280	0.0633478	AGGUAGU	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr1_-_86622421_86622460	0.0630178	AGGUAGU	ENST00000370571.2|COL24A1|ENSG00000171502.10|collagen, type XXIV, alpha 1
hg19_v2_chr14_-_57735528_57735726	0.0625014	AGGUAGU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_+_56111361_56111403	0.0622814	AGGUAGU	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr1_+_65210772_65210840	0.0614622	AGGUAGU	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr14_+_58666824_58666902	0.0606762	AGGUAGU	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr7_+_89841000_89841023	0.0604921	AGGUAGU	ENST00000287908.3|STEAP2|ENSG00000157214.9|STEAP family member 2, metalloreductase
hg19_v2_chr10_+_98592009_98592061	0.0602245	AGGUAGU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr8_+_59465728_59465826	0.0599274	AGGUAGU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr14_+_100705322_100705360	0.0584767	AGGUAGU	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr15_+_36887069_36887101	0.0575003	AGGUAGU	ENST00000566807.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000567389.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000562877.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41
hg19_v2_chr1_-_205601064_205601090	0.0553768	AGGUAGU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr1_+_164528866_164528877	0.0553613	AGGUAGU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr14_+_19553365_19553365	0.0549117	AGGUAGU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr2_-_128615681_128615737	0.0545903	AGGUAGU	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr3_+_158991025_158991083	0.0544545	AGGUAGU	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr5_-_37371278_37371289	0.0538799	AGGUAGU	ENST00000231498.3|NUP155|ENSG00000113569.11|nucleoporin 155kDa
hg19_v2_chr2_+_32390925_32390941	0.0536396	AGGUAGU	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chr5_-_74326724_74326724	0.0533307	AGGUAGU	ENST00000322348.4|GCNT4|ENSG00000176928.4|glucosaminyl (N-acetyl) transferase 4, core 2
hg19_v2_chr3_-_48229846_48229918	0.0528776	AGGUAGU	ENST00000302506.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000351231.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000437972.1|CDC25A|ENSG00000164045.7|cell division cycle 25A
hg19_v2_chrX_-_41782249_41782287	0.0523454	AGGUAGU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr11_-_110167352_110167447	0.0502123	AGGUAGU	ENST00000533991.1|RDX|ENSG00000137710.10|radixin 	ENST00000528498.1|RDX|ENSG00000137710.10|radixin 	ENST00000405097.1|RDX|ENSG00000137710.10|radixin 	ENST00000528900.1|RDX|ENSG00000137710.10|radixin 	ENST00000530301.1|RDX|ENSG00000137710.10|radixin 	ENST00000343115.4|RDX|ENSG00000137710.10|radixin
hg19_v2_chr14_+_51706886_51707006	0.0500058	AGGUAGU	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr5_+_38846101_38846174	0.0494711	AGGUAGU	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chr2_+_149402553_149402568	0.0494231	AGGUAGU	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr12_-_42877764_42877803	0.048226	AGGUAGU	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr9_-_135819987_135820020	0.0475846	AGGUAGU	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr7_+_35840542_35840671	0.0462058	AGGUAGU	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chrX_-_83757399_83757487	0.0460469	AGGUAGU	ENST00000373177.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000297977.5|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000506585.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000449553.2|HDX|ENSG00000165259.9|highly divergent homeobox
hg19_v2_chr2_+_242641442_242641478	0.045957	AGGUAGU	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr12_+_62654119_62654142	0.0457579	AGGUAGU	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr2_+_204192942_204193038	0.0445313	AGGUAGU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr9_+_128509624_128509658	0.0444903	AGGUAGU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr1_-_92351769_92351787	0.0426504	AGGUAGU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr2_+_32582086_32582106	0.0414234	AGGUAGU	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chr10_+_97803151_97803348	0.0395358	AGGUAGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr11_+_63870660_63870660	0.0379256	AGGUAGU	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr12_+_65004292_65004306	0.0374351	AGGUAGU	ENST00000542104.1|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3 	ENST00000336061.2|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3
hg19_v2_chr4_+_71587669_71587752	0.0373824	AGGUAGU	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chrX_+_135067576_135067634	0.0355467	AGGUAGU	ENST00000370701.1|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370698.3|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370695.4|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
hg19_v2_chr9_-_14693417_14693469	0.0344911	AGGUAGU	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr14_-_20020272_20020272	0.0343072	AGGUAGU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr2_+_189839046_189839105	0.034141	AGGUAGU	ENST00000304636.3|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1 	ENST00000317840.5|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1
hg19_v2_chr3_+_133293278_133293492	0.0334493	AGGUAGU	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr17_+_28705921_28706000	0.0333464	AGGUAGU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr10_-_38146510_38146576	0.0330972	AGGUAGU	ENST00000395867.3|ZNF248|ENSG00000198105.7|zinc finger protein 248
hg19_v2_chr7_-_120498357_120498456	0.0327111	AGGUAGU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr7_+_77325738_77325789	0.0324017	AGGUAGU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr5_+_148724993_148725102	0.0315183	AGGUAGU	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr20_+_3869423_3869486	0.0307045	AGGUAGU	ENST00000497424.1|PANK2|ENSG00000125779.17|pantothenate kinase 2
hg19_v2_chr16_+_70332956_70333130	0.0306807	AGGUAGU	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr22_+_50781723_50781784	0.0300746	AGGUAGU	ENST00000359139.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395741.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395744.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2
hg19_v2_chr14_-_81687197_81687280	0.0288608	AGGUAGU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr5_-_39074479_39074515	0.0287388	AGGUAGU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr20_+_37434329_37434371	0.0287081	AGGUAGU	ENST00000299824.1|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B 	ENST00000373331.2|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B
hg19_v2_chr2_+_113239710_113239753	0.028541	AGGUAGU	ENST00000233336.6|TTL|ENSG00000114999.7|tubulin tyrosine ligase
hg19_v2_chr15_-_44486632_44486664	0.0283483	AGGUAGU	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr8_-_110988070_110988087	0.0279639	AGGUAGU	ENST00000524391.1|KCNV1|ENSG00000164794.4|potassium channel, subfamily V, member 1
hg19_v2_chr7_-_83824169_83824217	0.0268262	AGGUAGU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr12_-_110318263_110318320	0.0267284	AGGUAGU	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr7_-_23510086_23510118	0.0266094	AGGUAGU	ENST00000258729.3|IGF2BP3|ENSG00000136231.9|insulin-like growth factor 2 mRNA binding protein 3
hg19_v2_chr10_+_1095416_1095482	0.0254724	AGGUAGU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr8_+_121137333_121137352	0.0242013	AGGUAGU	ENST00000309791.4|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000297848.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000247781.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1
hg19_v2_chr2_+_232260254_232260274	0.0241652	AGGUAGU	ENST00000287590.5|B3GNT7|ENSG00000156966.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
hg19_v2_chr7_+_30067973_30068063	0.0239647	AGGUAGU	ENST00000258679.7|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000449726.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396257.2|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396259.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg19_v2_chr12_-_112123726_112123809	0.0239636	AGGUAGU	ENST00000419234.4|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr19_-_47975417_47975441	0.022803	AGGUAGU	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr6_+_107349392_107349461	0.0224132	AGGUAGU	ENST00000443043.1|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203 	ENST00000405204.2|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203 	ENST00000311381.5|C6orf203|ENSG00000130349.5|chromosome 6 open reading frame 203
hg19_v2_chr7_+_104654623_104654669	0.0223569	AGGUAGU	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr4_-_42154895_42154895	0.0220154	AGGUAGU	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr21_-_30365136_30365270	0.0217297	AGGUAGU	ENST00000361371.5|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1 	ENST00000389194.2|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1 	ENST00000389195.2|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1
hg19_v2_chr18_+_9475668_9475698	0.020168	AGGUAGU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chr6_+_24403144_24403224	0.019733	AGGUAGU	ENST00000274747.7|MRS2|ENSG00000124532.10|MRS2 magnesium transporter 	ENST00000543597.1|MRS2|ENSG00000124532.10|MRS2 magnesium transporter 	ENST00000535061.1|MRS2|ENSG00000124532.10|MRS2 magnesium transporter 	ENST00000378353.1|MRS2|ENSG00000124532.10|MRS2 magnesium transporter 	ENST00000378386.3|MRS2|ENSG00000124532.10|MRS2 magnesium transporter 	ENST00000443868.2|MRS2|ENSG00000124532.10|MRS2 magnesium transporter
hg19_v2_chr16_-_12009735_12009793	0.019146	AGGUAGU	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr6_+_133562472_133562556	0.0191246	AGGUAGU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chrX_-_24045303_24045303	0.0188854	AGGUAGU	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr18_+_19749386_19749404	0.0182002	AGGUAGU	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr11_+_7273181_7273223	0.0180876	AGGUAGU	ENST00000318881.6|SYT9|ENSG00000170743.12|synaptotagmin IX
hg19_v2_chr12_+_118814344_118814369	0.0179801	AGGUAGU	ENST00000397564.2|SUDS3|ENSG00000111707.7|suppressor of defective silencing 3 homolog (S. cerevisiae)
hg19_v2_chr8_-_23315190_23315235	0.0178402	AGGUAGU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr2_+_60983361_60983418	0.0177855	AGGUAGU	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr7_-_98741642_98741713	0.0176922	AGGUAGU	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr6_-_94129244_94129284	0.0173538	AGGUAGU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr18_+_67068228_67068291	0.0172228	AGGUAGU	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr17_-_61850894_61851135	0.0171146	AGGUAGU	ENST00000403162.3|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000582252.1|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000225726.5|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47
hg19_v2_chr4_+_20702059_20702104	0.0162732	AGGUAGU	ENST00000444671.2|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000510700.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000506745.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514663.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509469.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000515339.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513861.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502374.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000538990.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000504630.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513590.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514292.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502938.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509625.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000505160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000507634.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513459.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511089.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chr6_-_7313381_7313458	0.0160112	AGGUAGU	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chr1_-_231473578_231473619	0.0159876	AGGUAGU	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr20_-_656823_656902	0.015825	AGGUAGU	ENST00000246104.6|SCRT2|ENSG00000215397.3|scratch family zinc finger 2
hg19_v2_chr2_+_179345173_179345221	0.0143931	AGGUAGU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr17_-_71228357_71228533	0.0133562	AGGUAGU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr12_+_12764773_12764852	0.0130595	AGGUAGU	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr15_-_34502278_34502318	0.0129784	AGGUAGU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr12_+_123868320_123868320	0.0122794	AGGUAGU	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chr5_+_153825510_153825529	0.0122061	AGGUAGU	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr12_-_58240470_58240522	0.0117496	AGGUAGU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr2_+_160568978_160569064	0.0116878	AGGUAGU	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr12_-_77459306_77459365	0.0112968	AGGUAGU	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr16_-_89007491_89007608	0.010404	AGGUAGU	ENST00000327483.5|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000564416.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr9_+_6413317_6413418	0.00990759	AGGUAGU	ENST00000276893.5|UHRF2|ENSG00000147854.12|ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 	ENST00000381373.3|UHRF2|ENSG00000147854.12|ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
hg19_v2_chr21_+_42539701_42539728	0.0092501	AGGUAGU	ENST00000330333.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000328735.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000347667.5|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2
hg19_v2_chr7_+_88388628_88388682	0.00823103	AGGUAGU	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr17_-_46688334_46688385	0.00801903	AGGUAGU	ENST00000239165.7|HOXB7|ENSG00000260027.3|homeobox B7
hg19_v2_chr4_+_56212270_56212298	0.00744935	AGGUAGU	ENST00000264228.4|SRD5A3|ENSG00000128039.6|steroid 5 alpha-reductase 3
hg19_v2_chr11_+_111945011_111945069	0.00744049	AGGUAGU	ENST00000532163.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000280352.9|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000530104.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000526879.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000393047.3|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57 	ENST00000525785.1|C11orf57|ENSG00000150776.13|chromosome 11 open reading frame 57
hg19_v2_chr9_-_111882195_111882255	0.00731008	AGGUAGU	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr2_-_50574856_50574892	0.00697991	AGGUAGU	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr20_-_5591626_5591677	0.00675444	AGGUAGU	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr15_-_50411412_50411437	0.00626837	AGGUAGU	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr22_-_17602200_17602265	0.00601186	AGGUAGU	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr1_-_200379180_200379191	0.00587471	AGGUAGU	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr2_-_69870835_69870853	0.00521096	AGGUAGU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr3_+_50712672_50712703	0.00496069	AGGUAGU	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr2_+_5832799_5832799	0.00332262	AGGUAGU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr13_-_103053946_103054124	0.00300629	AGGUAGU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr8_+_56014949_56015048	0.00282961	AGGUAGU	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr9_-_111929560_111929571	0.00280117	AGGUAGU	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr4_+_55095264_55095390	0.000437913	AGGUAGU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr17_-_9929581_9929626	6.78348e-05	AGGUAGU	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
