hg19_v2_chr17_+_68165657_68165688	0.23029	ACUGGCC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr22_+_24951436_24951471	0.0909801	ACUGGCC	ENST00000215829.3|SNRPD3|ENSG00000100028.7|small nuclear ribonucleoprotein D3 polypeptide 18kDa
hg19_v2_chr2_+_176957619_176957619	0.0787713	ACUGGCC	ENST00000392539.3|HOXD13|ENSG00000128714.5|homeobox D13
hg19_v2_chr7_+_108210012_108210012	0.0753926	ACUGGCC	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr1_+_218519577_218519594	0.0743281	ACUGGCC	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr4_+_55524085_55524110	0.0686944	ACUGGCC	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr3_-_128902729_128902753	0.0677014	ACUGGCC	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr2_+_48541776_48541874	0.067024	ACUGGCC	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr3_-_33481835_33481905	0.0611671	ACUGGCC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr6_+_86159821_86159839	0.0611357	ACUGGCC	ENST00000369651.3|NT5E|ENSG00000135318.7|5'-nucleotidase, ecto (CD73)
hg19_v2_chr1_+_182992545_182992630	0.0558181	ACUGGCC	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr7_-_26904317_26904362	0.0557289	ACUGGCC	ENST00000345317.2|SKAP2|ENSG00000005020.8|src kinase associated phosphoprotein 2
hg19_v2_chr15_+_44719394_44719579	0.0523433	ACUGGCC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr17_-_66287257_66287276	0.0471939	ACUGGCC	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr13_+_111365602_111365625	0.0458006	ACUGGCC	ENST00000333219.7|ING1|ENSG00000153487.11|inhibitor of growth family, member 1
hg19_v2_chr8_-_101965146_101965236	0.0440699	ACUGGCC	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr2_+_14772810_14772853	0.0410075	ACUGGCC	ENST00000295092.2|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A 	ENST00000331243.4|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A
hg19_v2_chr10_+_70480963_70481010	0.0400773	ACUGGCC	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr11_+_34073195_34073266	0.0399672	ACUGGCC	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr10_-_94333784_94333860	0.0381449	ACUGGCC	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr11_-_77532050_77532066	0.0372103	ACUGGCC	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr12_+_79258547_79258607	0.0369683	ACUGGCC	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr1_-_26232951_26232959	0.0335662	ACUGGCC	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr17_-_65241281_65241326	0.032297	ACUGGCC	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr12_+_110437328_110437358	0.0299871	ACUGGCC	ENST00000261739.4|ANKRD13A|ENSG00000076513.12|ankyrin repeat domain 13A
hg19_v2_chr6_-_166075557_166075588	0.0292262	ACUGGCC	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr8_+_110552337_110552423	0.0289355	ACUGGCC	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr14_+_102228123_102228237	0.0285055	ACUGGCC	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chrX_+_151806637_151806637	0.0280072	ACUGGCC	ENST00000370306.2|GABRQ|ENSG00000147402.7|gamma-aminobutyric acid (GABA) A receptor, theta
hg19_v2_chr18_-_47013586_47013633	0.0264447	ACUGGCC	ENST00000318240.3|C18orf32|ENSG00000177576.6|chromosome 18 open reading frame 32 	ENST00000579820.1|C18orf32|ENSG00000177576.6|chromosome 18 open reading frame 32
hg19_v2_chr1_+_145507587_145507633	0.0261438	ACUGGCC	ENST00000330165.8|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A 	ENST00000369307.3|RBM8A|ENSG00000131795.8|RNA binding motif protein 8A
hg19_v2_chr14_+_90863327_90863356	0.0258361	ACUGGCC	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr11_-_27494279_27494308	0.0256109	ACUGGCC	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chrX_-_24045303_24045303	0.0253947	ACUGGCC	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr14_-_50698276_50698304	0.025384	ACUGGCC	ENST00000216373.5|SOS2|ENSG00000100485.7|son of sevenless homolog 2 (Drosophila)
hg19_v2_chr22_+_24666763_24666876	0.0249718	ACUGGCC	ENST00000437398.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000421374.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000314328.9|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000541492.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like
hg19_v2_chr5_+_172483347_172483407	0.0238467	ACUGGCC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr12_-_25403737_25403881	0.0231083	ACUGGCC	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr12_+_11802753_11802834	0.0226342	ACUGGCC	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr10_+_75670862_75670916	0.0221506	ACUGGCC	ENST00000446342.1|PLAU|ENSG00000122861.11|plasminogen activator, urokinase 	ENST00000372764.3|PLAU|ENSG00000122861.11|plasminogen activator, urokinase 	ENST00000372762.4|PLAU|ENSG00000122861.11|plasminogen activator, urokinase
hg19_v2_chr17_+_44668035_44668100	0.0218505	ACUGGCC	ENST00000398238.4|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor 	ENST00000225282.8|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr1_-_92351769_92351787	0.021557	ACUGGCC	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr3_-_131221790_131221835	0.0214358	ACUGGCC	ENST00000512877.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000264995.3|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000511168.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000425847.2|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3
hg19_v2_chr8_-_66546439_66546451	0.0210282	ACUGGCC	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr1_+_183155373_183155423	0.0209815	ACUGGCC	ENST00000493293.1|LAMC2|ENSG00000058085.10|laminin, gamma 2 	ENST00000264144.4|LAMC2|ENSG00000058085.10|laminin, gamma 2
hg19_v2_chr1_+_203764742_203764834	0.0208747	ACUGGCC	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr2_+_204192942_204193038	0.0199383	ACUGGCC	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr10_-_38146510_38146576	0.019855	ACUGGCC	ENST00000395867.3|ZNF248|ENSG00000198105.7|zinc finger protein 248
hg19_v2_chr8_-_30585439_30585494	0.0197379	ACUGGCC	ENST00000221130.5|GSR|ENSG00000104687.8|glutathione reductase
hg19_v2_chr5_-_133512683_133512729	0.0194816	ACUGGCC	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr2_+_242641442_242641478	0.0191196	ACUGGCC	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr13_-_99404875_99404942	0.0189504	ACUGGCC	ENST00000376503.5|SLC15A1|ENSG00000088386.11|solute carrier family 15 (oligopeptide transporter), member 1
hg19_v2_chr20_-_14318248_14318264	0.0188605	ACUGGCC	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr7_+_104654623_104654669	0.0184737	ACUGGCC	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr3_+_132136331_132136378	0.0184413	ACUGGCC	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr1_-_169863016_169863109	0.0180456	ACUGGCC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr3_-_123603137_123603203	0.0176891	ACUGGCC	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr6_-_75994536_75994684	0.0171036	ACUGGCC	ENST00000475111.2|TMEM30A|ENSG00000112697.11|transmembrane protein 30A 	ENST00000230461.6|TMEM30A|ENSG00000112697.11|transmembrane protein 30A
hg19_v2_chr2_+_139259324_139259389	0.0169246	ACUGGCC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr12_-_56236711_56236730	0.0163477	ACUGGCC	ENST00000409200.3|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chr12_+_56623827_56623867	0.016281	ACUGGCC	ENST00000424625.1|SLC39A5|ENSG00000139540.7|solute carrier family 39 (zinc transporter), member 5 	ENST00000419753.1|SLC39A5|ENSG00000139540.7|solute carrier family 39 (zinc transporter), member 5 	ENST00000454355.2|SLC39A5|ENSG00000139540.7|solute carrier family 39 (zinc transporter), member 5 	ENST00000417965.1|SLC39A5|ENSG00000139540.7|solute carrier family 39 (zinc transporter), member 5 	ENST00000436633.1|SLC39A5|ENSG00000139540.7|solute carrier family 39 (zinc transporter), member 5
hg19_v2_chr11_+_120207787_120207962	0.0162545	ACUGGCC	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr5_+_38846101_38846174	0.0162149	ACUGGCC	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chrX_-_40594755_40594809	0.0157514	ACUGGCC	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr11_+_33563821_33563877	0.0154455	ACUGGCC	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr20_+_42086525_42086568	0.0144907	ACUGGCC	ENST00000244020.3|SRSF6|ENSG00000124193.10|serine/arginine-rich splicing factor 6
hg19_v2_chr11_-_128392085_128392232	0.0138481	ACUGGCC	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr9_-_95527079_95527148	0.0130801	ACUGGCC	ENST00000356884.6|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila) 	ENST00000375512.3|BICD2|ENSG00000185963.9|bicaudal D homolog 2 (Drosophila)
hg19_v2_chr1_+_76540386_76540445	0.0129224	ACUGGCC	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr22_+_40390930_40390994	0.0129052	ACUGGCC	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr19_+_33166313_33166313	0.0127719	ACUGGCC	ENST00000334176.3|RGS9BP|ENSG00000186326.3|regulator of G protein signaling 9 binding protein
hg19_v2_chr6_+_39760783_39760796	0.0124249	ACUGGCC	ENST00000398904.2|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2 	ENST00000538976.1|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2
hg19_v2_chr17_+_30677136_30677205	0.0121424	ACUGGCC	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr21_-_16437255_16437340	0.012117	ACUGGCC	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr8_-_57123815_57123867	0.0112879	ACUGGCC	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr11_-_17035943_17035990	0.0112185	ACUGGCC	ENST00000355661.3|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000532079.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000448080.2|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000531066.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7
hg19_v2_chr9_-_135819987_135820020	0.010872	ACUGGCC	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr5_+_179921430_179921461	0.0106728	ACUGGCC	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr12_-_104234966_104234984	0.0105881	ACUGGCC	ENST00000392876.3|NT5DC3|ENSG00000111696.7|5'-nucleotidase domain containing 3
hg19_v2_chr17_-_38020392_38020477	0.0105304	ACUGGCC	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr9_-_3525968_3526016	0.0103098	ACUGGCC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr14_-_27066636_27066701	0.0101087	ACUGGCC	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr1_+_15853308_15853413	0.00987189	ACUGGCC	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chrX_-_80065146_80065250	0.0098412	ACUGGCC	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr12_-_31744031_31744059	0.00973261	ACUGGCC	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr22_-_32146106_32146141	0.00971367	ACUGGCC	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chr10_-_99052382_99052413	0.00879226	ACUGGCC	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr3_-_57199397_57199432	0.00878649	ACUGGCC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr14_+_57046500_57046529	0.00874031	ACUGGCC	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr13_+_98794810_98794826	0.00870239	ACUGGCC	ENST00000595437.1|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr7_-_14029515_14029642	0.0086915	ACUGGCC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr2_+_12857015_12857041	0.00847339	ACUGGCC	ENST00000155926.4|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr5_+_78532003_78532017	0.0083525	ACUGGCC	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr4_+_41992489_41992561	0.008172	ACUGGCC	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr10_+_97515409_97515442	0.00803168	ACUGGCC	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr2_+_29204161_29204178	0.00790906	ACUGGCC	ENST00000379558.4|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A 	ENST00000403861.2|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A
hg19_v2_chr3_+_9773409_9773479	0.00769301	ACUGGCC	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr1_+_111991474_111991558	0.00741117	ACUGGCC	ENST00000369722.3|ATP5F1|ENSG00000116459.6|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v2_chr17_-_33416231_33416338	0.00739133	ACUGGCC	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr7_+_155250824_155250824	0.00671035	ACUGGCC	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr2_+_113931513_113931583	0.00659424	ACUGGCC	ENST00000245796.6|PSD4|ENSG00000125637.11|pleckstrin and Sec7 domain containing 4 	ENST00000441564.3|PSD4|ENSG00000125637.11|pleckstrin and Sec7 domain containing 4
hg19_v2_chr1_-_67519782_67519810	0.00655242	ACUGGCC	ENST00000235345.5|SLC35D1|ENSG00000116704.6|solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
hg19_v2_chr9_-_37465396_37465454	0.00645816	ACUGGCC	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr8_-_91095099_91095113	0.00617146	ACUGGCC	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr2_-_217560248_217560278	0.00549265	ACUGGCC	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr8_-_93115445_93115462	0.00513422	ACUGGCC	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr12_-_96794143_96794264	0.00506583	ACUGGCC	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr11_-_71823796_71823826	0.0043248	ACUGGCC	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr15_+_84322827_84322861	0.00423533	ACUGGCC	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr9_+_131644388_131644393	0.00413489	ACUGGCC	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr5_+_177540444_177540506	0.00401586	ACUGGCC	ENST00000274605.5|N4BP3|ENSG00000145911.5|NEDD4 binding protein 3
hg19_v2_chr16_-_28074822_28074830	0.00386487	ACUGGCC	ENST00000395724.3|GSG1L|ENSG00000169181.8|GSG1-like 	ENST00000380898.2|GSG1L|ENSG00000169181.8|GSG1-like 	ENST00000447459.2|GSG1L|ENSG00000169181.8|GSG1-like
hg19_v2_chr18_+_67068228_67068291	0.00375435	ACUGGCC	ENST00000382713.5|DOK6|ENSG00000206052.6|docking protein 6
hg19_v2_chr2_-_69870835_69870853	0.00366087	ACUGGCC	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr15_+_64443905_64443943	0.00335448	ACUGGCC	ENST00000325881.4|SNX22|ENSG00000157734.9|sorting nexin 22
hg19_v2_chr2_-_206950781_206950947	0.0027119	ACUGGCC	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr17_+_61627814_61627871	0.00257167	ACUGGCC	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr6_-_29527702_29527702	0.00255431	ACUGGCC	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr17_+_48796905_48797008	0.00232463	ACUGGCC	ENST00000505658.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000393227.2|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000240304.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000311571.3|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000505619.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000544170.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000510984.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr12_-_111021110_111021142	0.00208969	ACUGGCC	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr20_+_57226284_57226345	0.00191373	ACUGGCC	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr7_-_143059845_143059866	0.00173053	ACUGGCC	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr2_-_161350305_161350391	0.00156405	ACUGGCC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr10_-_100027943_100028007	0.00153525	ACUGGCC	ENST00000260702.3|LOXL4|ENSG00000138131.3|lysyl oxidase-like 4
hg19_v2_chr6_-_47277634_47277651	0.00118078	ACUGGCC	ENST00000296861.2|TNFRSF21|ENSG00000146072.6|tumor necrosis factor receptor superfamily, member 21
hg19_v2_chr2_-_38978492_38978636	0.000818474	ACUGGCC	ENST00000409276.1|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7 	ENST00000446327.2|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7 	ENST00000313117.6|SRSF7|ENSG00000115875.14|serine/arginine-rich splicing factor 7
hg19_v2_chr1_-_166028709_166028709	0.000805288	ACUGGCC	ENST00000595430.1|AL626787.1|ENSG00000267884.1|AL626787.1
hg19_v2_chrX_-_47479246_47479272	0.00040039	ACUGGCC	ENST00000295987.7|SYN1|ENSG00000008056.8|synapsin I 	ENST00000340666.4|SYN1|ENSG00000008056.8|synapsin I
