hg19_v2_chr7_+_36429409_36429420	0.110189	ACUGCAU	ENST00000265748.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr12_-_93323013_93323112	0.0883675	ACUGCAU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr3_-_101232019_101232085	0.0864452	ACUGCAU	ENST00000394095.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394091.1|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394094.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000358203.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000348610.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000314261.7|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7
hg19_v2_chr5_-_56247935_56247959	0.0849648	ACUGCAU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr18_-_19180681_19180711	0.0848508	ACUGCAU	ENST00000269214.5|ESCO1|ENSG00000141446.6|establishment of sister chromatid cohesion N-acetyltransferase 1
hg19_v2_chr9_+_112542572_112542590	0.080333	ACUGCAU	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr12_-_110939870_110939937	0.0779718	ACUGCAU	ENST00000447578.2|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000546588.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000360579.7|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000549970.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000549578.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v2_chr1_-_225840747_225840860	0.0724715	ACUGCAU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr16_+_81069433_81069462	0.0687674	ACUGCAU	ENST00000299575.4|ATMIN|ENSG00000166454.5|ATM interactor
hg19_v2_chr12_-_109125285_109125372	0.0683112	ACUGCAU	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr5_+_137801160_137801179	0.0658577	ACUGCAU	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr3_+_40351169_40351206	0.0651666	ACUGCAU	ENST00000232905.3|EIF1B|ENSG00000114784.3|eukaryotic translation initiation factor 1B
hg19_v2_chr11_-_85780086_85780161	0.0637178	ACUGCAU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr3_-_167813672_167813763	0.0633585	ACUGCAU	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr17_+_29421900_29421951	0.0615369	ACUGCAU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr8_-_74884511_74884546	0.0614585	ACUGCAU	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr16_+_56965960_56966072	0.0586264	ACUGCAU	ENST00000439977.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000344114.4|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000300302.5|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000379792.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr2_+_109335929_109336002	0.0585109	ACUGCAU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr20_+_10199468_10199516	0.0559604	ACUGCAU	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr15_-_83621435_83621495	0.0539289	ACUGCAU	ENST00000450735.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000426485.1|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000399166.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000304231.8|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila)
hg19_v2_chr16_+_12995468_12995497	0.0519856	ACUGCAU	ENST00000424107.3|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558583.1|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558318.1|SHISA9|ENSG00000237515.6|shisa family member 9
hg19_v2_chr10_-_5855350_5855512	0.0519284	ACUGCAU	ENST00000456041.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380181.3|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000418688.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380132.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000609712.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380191.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2
hg19_v2_chr18_-_18691739_18691812	0.0519057	ACUGCAU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr3_-_71774516_71774587	0.0517079	ACUGCAU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chrX_-_131352152_131352204	0.051231	ACUGCAU	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr10_-_75910789_75910821	0.0505067	ACUGCAU	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr12_+_69004619_69004699	0.0497369	ACUGCAU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr4_+_77870856_77870919	0.0491254	ACUGCAU	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chrX_-_135056216_135056227	0.0488995	ACUGCAU	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr9_+_112810878_112810985	0.046923	ACUGCAU	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr10_+_63422695_63422755	0.0460415	ACUGCAU	ENST00000330194.2|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107 	ENST00000389639.3|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107
hg19_v2_chr11_+_33278811_33279133	0.0443998	ACUGCAU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr10_-_32636106_32636150	0.042911	ACUGCAU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr5_-_137911049_137911133	0.0427159	ACUGCAU	ENST00000297185.3|HSPA9|ENSG00000113013.8|heat shock 70kDa protein 9 (mortalin)
hg19_v2_chr4_+_57774042_57774114	0.0414897	ACUGCAU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr2_+_118846008_118846100	0.0411479	ACUGCAU	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr11_+_107461948_107462009	0.0401369	ACUGCAU	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr7_-_111846435_111846471	0.0397384	ACUGCAU	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr1_-_244615425_244615441	0.039568	ACUGCAU	ENST00000366535.3|ADSS|ENSG00000035687.9|adenylosuccinate synthase
hg19_v2_chr17_+_30813576_30813637	0.039275	ACUGCAU	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chr2_-_37193606_37193633	0.0388689	ACUGCAU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr4_+_172734548_172734654	0.0379396	ACUGCAU	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr10_+_43633914_43633935	0.037678	ACUGCAU	ENST00000374466.3|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2 	ENST00000374464.1|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2
hg19_v2_chr1_+_25071848_25071944	0.0371644	ACUGCAU	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr1_-_70671216_70671303	0.0368382	ACUGCAU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr6_+_126112001_126112062	0.0364269	ACUGCAU	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr3_-_120461378_120461389	0.0360674	ACUGCAU	ENST00000273375.3|RABL3|ENSG00000144840.4|RAB, member of RAS oncogene family-like 3
hg19_v2_chr5_+_134181625_134181713	0.0359002	ACUGCAU	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr5_-_133304473_133304489	0.0357997	ACUGCAU	ENST00000231512.3|C5orf15|ENSG00000113583.6|chromosome 5 open reading frame 15
hg19_v2_chr9_+_108210279_108210435	0.0341617	ACUGCAU	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr4_-_76598296_76598318	0.0340391	ACUGCAU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr2_-_219433014_219433100	0.0337554	ACUGCAU	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr13_-_21476900_21476949	0.0335077	ACUGCAU	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr10_+_111967345_111967442	0.0333744	ACUGCAU	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr6_+_64281906_64281922	0.0332768	ACUGCAU	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr3_+_155588300_155588369	0.0327862	ACUGCAU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr2_-_157189180_157189290	0.0323762	ACUGCAU	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr5_+_60628074_60628100	0.0318325	ACUGCAU	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr6_+_26199737_26199754	0.0310576	ACUGCAU	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr15_-_44486632_44486664	0.0308058	ACUGCAU	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr17_+_30264014_30264086	0.0303406	ACUGCAU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr15_+_44829255_44829331	0.0302967	ACUGCAU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr9_-_86432547_86432699	0.03025	ACUGCAU	ENST00000376365.3|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1 	ENST00000376371.2|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1
hg19_v2_chr1_-_244013384_244013430	0.0302282	ACUGCAU	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr17_+_60536002_60536040	0.0301406	ACUGCAU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr14_+_100705322_100705360	0.0296588	ACUGCAU	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr17_+_58677539_58677610	0.0293933	ACUGCAU	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr10_-_88281494_88281572	0.026968	ACUGCAU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr15_+_41709302_41709348	0.0264368	ACUGCAU	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr15_+_57210818_57210930	0.0263364	ACUGCAU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr7_-_83824169_83824217	0.0260045	ACUGCAU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr1_+_229406847_229406935	0.025538	ACUGCAU	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr21_-_43430440_43430496	0.0255369	ACUGCAU	ENST00000398505.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000310826.5|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000449949.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398499.1|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398497.2|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21 	ENST00000398511.3|ZBTB21|ENSG00000173276.9|zinc finger and BTB domain containing 21
hg19_v2_chr5_-_78809950_78810040	0.0254698	ACUGCAU	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr7_-_75988321_75988348	0.0253054	ACUGCAU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr2_+_9346892_9346948	0.0252458	ACUGCAU	ENST00000281419.3|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENST00000315273.4|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
hg19_v2_chr16_-_80838195_80838228	0.0247583	ACUGCAU	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr4_+_144257915_144258009	0.0240275	ACUGCAU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr10_+_23728198_23728231	0.0237012	ACUGCAU	ENST00000376495.3|OTUD1|ENSG00000165312.5|OTU domain containing 1
hg19_v2_chr9_+_33025209_33025279	0.0226271	ACUGCAU	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr2_+_196521458_196521491	0.0221645	ACUGCAU	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr17_-_60005365_60005377	0.022045	ACUGCAU	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr12_+_62654119_62654142	0.0219283	ACUGCAU	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr3_+_113465866_113465925	0.0218477	ACUGCAU	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr5_+_36876833_36876894	0.0217274	ACUGCAU	ENST00000282516.8|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila) 	ENST00000448238.2|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila)
hg19_v2_chr5_+_61602055_61602083	0.0215117	ACUGCAU	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr2_+_139259324_139259389	0.0213616	ACUGCAU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr3_-_171178157_171178225	0.0212173	ACUGCAU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr2_-_24149977_24150007	0.0209572	ACUGCAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr2_+_235860616_235860645	0.0208277	ACUGCAU	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chrX_-_73834449_73834481	0.0206992	ACUGCAU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr2_+_105471969_105471969	0.0201816	ACUGCAU	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr17_+_30677136_30677205	0.0196594	ACUGCAU	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr3_+_180630090_180630311	0.019515	ACUGCAU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr9_-_15510989_15511017	0.019411	ACUGCAU	ENST00000380715.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380716.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380738.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380733.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr6_+_163835669_163835693	0.0192835	ACUGCAU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr20_+_43514315_43514319	0.0190069	ACUGCAU	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr6_-_45345597_45345721	0.0187974	ACUGCAU	ENST00000371460.1|SUPT3H|ENSG00000196284.9|suppressor of Ty 3 homolog (S. cerevisiae) 	ENST00000371459.1|SUPT3H|ENSG00000196284.9|suppressor of Ty 3 homolog (S. cerevisiae)
hg19_v2_chr13_+_27131887_27131899	0.0187209	ACUGCAU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr13_+_33160553_33160564	0.0182247	ACUGCAU	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr10_-_121356007_121356147	0.0181277	ACUGCAU	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr10_+_98592009_98592061	0.0180066	ACUGCAU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr2_+_28974668_28974729	0.0179487	ACUGCAU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr12_-_76478686_76478813	0.0177921	ACUGCAU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr6_+_111195973_111195994	0.0177387	ACUGCAU	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr1_-_169455169_169455241	0.017727	ACUGCAU	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr16_-_53737795_53737850	0.0173482	ACUGCAU	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr12_-_42632016_42632089	0.0172011	ACUGCAU	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr1_-_34630820_34630875	0.0169542	ACUGCAU	ENST00000373381.4|CSMD2|ENSG00000121904.13|CUB and Sushi multiple domains 2
hg19_v2_chr4_+_144106080_144106144	0.0166019	ACUGCAU	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr12_-_25403737_25403881	0.0164434	ACUGCAU	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr12_-_124018252_124018279	0.0161129	ACUGCAU	ENST00000376874.4|RILPL1|ENSG00000188026.7|Rab interacting lysosomal protein-like 1
hg19_v2_chr6_-_166796461_166796496	0.0160379	ACUGCAU	ENST00000360961.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1 	ENST00000341756.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1
hg19_v2_chr2_+_208576355_208576475	0.0159801	ACUGCAU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr1_-_57889687_57889754	0.0155399	ACUGCAU	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr12_+_72233487_72233563	0.0153598	ACUGCAU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr2_+_148602058_148602185	0.0151833	ACUGCAU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr10_-_27443155_27443288	0.0151173	ACUGCAU	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr15_+_44719394_44719579	0.0147164	ACUGCAU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr3_-_79068594_79068627	0.0146067	ACUGCAU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr5_-_82373260_82373315	0.0140576	ACUGCAU	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr10_+_114709999_114710031	0.0138849	ACUGCAU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr11_-_67980744_67980882	0.0135496	ACUGCAU	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr19_+_41768401_41768437	0.0128314	ACUGCAU	ENST00000352456.3|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000595018.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000597725.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v2_chr13_+_39261224_39261266	0.0126759	ACUGCAU	ENST00000280481.7|FREM2|ENSG00000150893.9|FRAS1 related extracellular matrix protein 2
hg19_v2_chr5_+_151151471_151151496	0.0120996	ACUGCAU	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr2_+_23608064_23608088	0.0120889	ACUGCAU	ENST00000486442.1|KLHL29|ENSG00000119771.10|kelch-like family member 29
hg19_v2_chr8_-_29940628_29940723	0.0116091	ACUGCAU	ENST00000545648.1|TMEM66|ENSG00000133872.9|transmembrane protein 66 	ENST00000256255.6|TMEM66|ENSG00000133872.9|transmembrane protein 66
hg19_v2_chr14_-_82000140_82000229	0.0115923	ACUGCAU	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr7_-_122526799_122526818	0.0115564	ACUGCAU	ENST00000334010.7|CADPS2|ENSG00000081803.11|Ca++-dependent secretion activator 2 	ENST00000313070.7|CADPS2|ENSG00000081803.11|Ca++-dependent secretion activator 2
hg19_v2_chr18_+_43753974_43754019	0.011556	ACUGCAU	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr6_+_35182176_35182196	0.0114131	ACUGCAU	ENST00000394681.1|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3 	ENST00000274938.7|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3
hg19_v2_chr17_-_38020392_38020477	0.0112748	ACUGCAU	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr3_-_160283348_160283376	0.011043	ACUGCAU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr5_-_168006591_168006638	0.0105201	ACUGCAU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr12_+_104359576_104359601	0.0104136	ACUGCAU	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr9_-_6007787_6007957	0.0103026	ACUGCAU	ENST00000399933.3|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000381461.2|KIAA2026|ENSG00000183354.7|KIAA2026 	ENST00000513355.2|KIAA2026|ENSG00000183354.7|KIAA2026
hg19_v2_chr21_-_36260980_36261011	0.00996678	ACUGCAU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr12_+_123868320_123868320	0.00967237	ACUGCAU	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chr17_-_58603568_58603610	0.00952963	ACUGCAU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr1_+_244816237_244816357	0.0095188	ACUGCAU	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr4_-_42659102_42659161	0.00947603	ACUGCAU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chrX_-_134049262_134049297	0.00924312	ACUGCAU	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr8_+_98656336_98656535	0.00893324	ACUGCAU	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr5_+_175875349_175875361	0.00863478	ACUGCAU	ENST00000261942.6|FAF2|ENSG00000113194.8|Fas associated factor family member 2
hg19_v2_chr15_-_101792137_101792159	0.00811522	ACUGCAU	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chr12_+_67663056_67663067	0.00771968	ACUGCAU	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr14_+_29234870_29235050	0.00766456	ACUGCAU	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr6_-_52926539_52926668	0.0069105	ACUGCAU	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr13_+_42622781_42622889	0.00683436	ACUGCAU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr2_+_39893043_39893118	0.00665987	ACUGCAU	ENST00000281961.2|TMEM178A|ENSG00000152154.6|transmembrane protein 178A
hg19_v2_chr7_+_29234028_29234043	0.00665647	ACUGCAU	ENST00000222792.6|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr4_-_142053952_142053996	0.00565168	ACUGCAU	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr12_-_31479045_31479074	0.00542227	ACUGCAU	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr9_-_126030817_126030906	0.00529718	ACUGCAU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chrX_-_112084043_112084071	0.00528344	ACUGCAU	ENST00000304758.1|AMOT|ENSG00000126016.9|angiomotin
hg19_v2_chr1_+_109234907_109234996	0.00518427	ACUGCAU	ENST00000370025.4|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370022.5|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370021.1|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B
hg19_v2_chr6_+_45389893_45389914	0.00491192	ACUGCAU	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr20_+_62496596_62496655	0.00487841	ACUGCAU	ENST00000369927.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000346249.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000348257.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000352482.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000351424.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000217121.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000358548.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2
hg19_v2_chr16_+_22019404_22019604	0.00456427	ACUGCAU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr9_-_127703333_127703398	0.00456132	ACUGCAU	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr4_-_125633876_125633897	0.00442126	ACUGCAU	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr7_+_30174426_30174441	0.0040862	ACUGCAU	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr10_+_69644404_69644427	0.00408501	ACUGCAU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chrX_-_129402857_129402880	0.00388444	ACUGCAU	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr2_-_74570520_74570547	0.00360124	ACUGCAU	ENST00000394019.2|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000346834.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000359484.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000423644.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000377634.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000436454.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5
hg19_v2_chr6_-_94129244_94129284	0.00353474	ACUGCAU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr4_+_72204755_72204778	0.00348315	ACUGCAU	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr17_-_60142609_60142657	0.00347937	ACUGCAU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chrX_-_110038990_110038997	0.00332793	ACUGCAU	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr2_+_5832799_5832799	0.00331908	ACUGCAU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr17_+_56833184_56833249	0.00323453	ACUGCAU	ENST00000308249.2|PPM1E|ENSG00000175175.4|protein phosphatase, Mg2+/Mn2+ dependent, 1E
hg19_v2_chr2_+_26568965_26569025	0.00321202	ACUGCAU	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr1_+_93544791_93544807	0.00320718	ACUGCAU	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr2_-_69870835_69870853	0.00317478	ACUGCAU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr4_-_66536057_66536071	0.00308158	ACUGCAU	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_+_42846443_42846502	0.00299736	ACUGCAU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr9_-_95055956_95056004	0.00263188	ACUGCAU	ENST00000375629.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000447699.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000375643.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000395554.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr12_+_123237321_123237407	0.00263114	ACUGCAU	ENST00000280557.6|DENR|ENSG00000139726.6|density-regulated protein 	ENST00000455982.2|DENR|ENSG00000139726.6|density-regulated protein
hg19_v2_chr3_-_53925863_53926015	0.00249372	ACUGCAU	ENST00000541726.1|SELK|ENSG00000113811.6|Selenoprotein K  	ENST00000495461.1|SELK|ENSG00000113811.6|Selenoprotein K
hg19_v2_chr16_+_68771128_68771255	0.00244263	ACUGCAU	ENST00000261769.5|CDH1|ENSG00000039068.14|cadherin 1, type 1, E-cadherin (epithelial) 	ENST00000422392.2|CDH1|ENSG00000039068.14|cadherin 1, type 1, E-cadherin (epithelial)
hg19_v2_chr7_-_26240357_26240377	0.00238924	ACUGCAU	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr11_+_125462690_125462768	0.00224746	ACUGCAU	ENST00000392708.4|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000529196.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000531491.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr2_+_178077477_178077525	0.0017602	ACUGCAU	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr2_+_99953816_99953894	0.0017217	ACUGCAU	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr10_+_104678032_104678094	0.00157777	ACUGCAU	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr9_+_129677039_129677119	0.0015141	ACUGCAU	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr5_-_131132658_131132719	0.00139888	ACUGCAU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr3_-_164913777_164913790	0.00118431	ACUGCAU	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr8_+_38614807_38614851	0.00106124	ACUGCAU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr14_+_57857262_57857334	0.000332588	ACUGCAU	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
