hg19_v2_chr12_+_69864129_69864222	0.0727468	AAGGUGC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr7_-_121036337_121036429	0.0700917	AAGGUGC	ENST00000426156.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000359943.3|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000412653.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C
hg19_v2_chr16_-_85722530_85722615	0.0633683	AAGGUGC	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr16_+_28996114_28996166	0.0609393	AAGGUGC	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr5_-_43313574_43313614	0.0595193	AAGGUGC	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr13_-_77601282_77601308	0.0576742	AAGGUGC	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr18_-_45456930_45456970	0.0571385	AAGGUGC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr10_+_111767720_111767752	0.0538225	AAGGUGC	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr2_-_153032484_153032537	0.0514783	AAGGUGC	ENST00000263904.4|STAM2|ENSG00000115145.5|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg19_v2_chr5_-_142065612_142065638	0.0487362	AAGGUGC	ENST00000360966.5|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic) 	ENST00000411960.1|FGF1|ENSG00000113578.13|fibroblast growth factor 1 (acidic)
hg19_v2_chrX_-_80065146_80065250	0.0487162	AAGGUGC	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr2_+_46926048_46926095	0.0478717	AAGGUGC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr11_-_72853091_72853151	0.0465531	AAGGUGC	ENST00000311172.7|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2 	ENST00000409314.1|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2
hg19_v2_chr6_-_111136513_111136525	0.0448893	AAGGUGC	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr4_+_55524085_55524110	0.0438805	AAGGUGC	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr11_-_116968987_116969166	0.0432962	AAGGUGC	ENST00000434315.2|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000292055.4|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375288.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000542607.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000445177.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375300.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000446921.2|SIK3|ENSG00000160584.11|SIK family kinase 3
hg19_v2_chr3_+_107241783_107241850	0.0422779	AAGGUGC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr5_-_180288248_180288291	0.0410647	AAGGUGC	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr1_+_173684047_173684136	0.04097	AAGGUGC	ENST00000546011.1|KLHL20|ENSG00000076321.6|kelch-like family member 20 	ENST00000209884.4|KLHL20|ENSG00000076321.6|kelch-like family member 20
hg19_v2_chr2_+_173940442_173940625	0.0407293	AAGGUGC	ENST00000409176.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000338983.3|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT  	ENST00000431503.2|MLTK|ENSG00000091436.12|Mitogen-activated protein kinase kinase kinase MLT
hg19_v2_chr21_+_38071430_38071456	0.040066	AAGGUGC	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr3_+_105085734_105085760	0.0399854	AAGGUGC	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr21_-_18985158_18985226	0.0392449	AAGGUGC	ENST00000339775.6|BTG3|ENSG00000154640.10|BTG family, member 3
hg19_v2_chr17_-_27621125_27621143	0.0388324	AAGGUGC	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr12_+_12764773_12764852	0.0387601	AAGGUGC	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr17_+_68165657_68165688	0.0367614	AAGGUGC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr16_+_71879861_71879927	0.0361293	AAGGUGC	ENST00000427980.2|ATXN1L|ENSG00000224470.3|ataxin 1-like 	ENST00000568581.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr3_+_171758344_171758358	0.0361162	AAGGUGC	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr1_-_20812690_20812763	0.036039	AAGGUGC	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr20_+_56884752_56884799	0.0347833	AAGGUGC	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr17_-_40306934_40307035	0.033724	AAGGUGC	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr3_-_123603137_123603203	0.0333025	AAGGUGC	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr5_-_171711061_171711076	0.0326587	AAGGUGC	ENST00000393792.2|UBTD2|ENSG00000168246.5|ubiquitin domain containing 2
hg19_v2_chr5_-_169407744_169407744	0.0325216	AAGGUGC	ENST00000377365.3|FAM196B|ENSG00000204767.3|family with sequence similarity 196, member B
hg19_v2_chr9_+_91003271_91003386	0.0297096	AAGGUGC	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr6_-_132272504_132272519	0.0289179	AAGGUGC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr7_-_111846435_111846471	0.0283059	AAGGUGC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr20_+_43595115_43595220	0.0275838	AAGGUGC	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr6_+_39760783_39760796	0.0263203	AAGGUGC	ENST00000398904.2|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2 	ENST00000538976.1|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2
hg19_v2_chr2_+_24714729_24714927	0.0261739	AAGGUGC	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr14_+_52456327_52456344	0.0254607	AAGGUGC	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr8_-_18871159_18871201	0.0251591	AAGGUGC	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr12_+_11802753_11802834	0.0228454	AAGGUGC	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr6_-_86352642_86352709	0.0225206	AAGGUGC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr4_-_157892498_157892546	0.0220843	AAGGUGC	ENST00000502773.1|PDGFC|ENSG00000145431.6|platelet derived growth factor C
hg19_v2_chr2_+_85198216_85198305	0.0219207	AAGGUGC	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr3_+_141205852_141205929	0.0218979	AAGGUGC	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr3_+_43328004_43328095	0.021443	AAGGUGC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr18_+_20513782_20513859	0.0210102	AAGGUGC	ENST00000399722.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399725.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399721.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000583594.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr20_+_34020827_34020827	0.0208653	AAGGUGC	ENST00000374375.1|GDF5OS|ENSG00000204183.1|growth differentiation factor 5 opposite strand
hg19_v2_chr10_-_119806085_119806114	0.0207524	AAGGUGC	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr9_+_15553055_15553101	0.0206939	AAGGUGC	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr5_+_78532003_78532017	0.0201171	AAGGUGC	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr18_-_29522989_29523104	0.0198116	AAGGUGC	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chrX_+_108780062_108780105	0.0192279	AAGGUGC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr11_+_108093839_108093850	0.0188078	AAGGUGC	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr12_-_56583332_56583369	0.0184416	AAGGUGC	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr4_+_183164574_183164586	0.0182575	AAGGUGC	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr6_-_99873145_99873207	0.0181139	AAGGUGC	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr5_+_108083517_108083576	0.0179719	AAGGUGC	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr6_+_122720681_122720713	0.0178541	AAGGUGC	ENST00000368455.4|HSF2|ENSG00000025156.8|heat shock transcription factor 2 	ENST00000452194.1|HSF2|ENSG00000025156.8|heat shock transcription factor 2
hg19_v2_chr12_-_44200052_44200136	0.0174855	AAGGUGC	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr8_+_8860314_8860388	0.0171881	AAGGUGC	ENST00000250263.7|ERI1|ENSG00000104626.10|exoribonuclease 1 	ENST00000519292.1|ERI1|ENSG00000104626.10|exoribonuclease 1
hg19_v2_chr4_+_6784401_6784510	0.0169711	AAGGUGC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr2_-_201828356_201828412	0.0162687	AAGGUGC	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr2_-_26101374_26101389	0.0162161	AAGGUGC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr1_+_26737253_26737269	0.0161841	AAGGUGC	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr8_+_28747884_28747938	0.0161313	AAGGUGC	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr6_-_11232891_11232915	0.0160748	AAGGUGC	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr11_-_130184555_130184581	0.015781	AAGGUGC	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr9_-_74383799_74383818	0.0157259	AAGGUGC	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr12_+_104458235_104458344	0.0155489	AAGGUGC	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr3_-_185542817_185542844	0.0154879	AAGGUGC	ENST00000382199.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr5_+_125935960_125935960	0.0154646	AAGGUGC	ENST00000297540.4|PHAX|ENSG00000164902.9|phosphorylated adaptor for RNA export
hg19_v2_chr14_+_103058948_103059005	0.015258	AAGGUGC	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr5_+_56111361_56111403	0.0152063	AAGGUGC	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr1_-_55680762_55680786	0.0144785	AAGGUGC	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr2_+_36582857_36583069	0.0141319	AAGGUGC	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr6_+_138188551_138188719	0.0140014	AAGGUGC	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr1_+_22379120_22379177	0.0129155	AAGGUGC	ENST00000400259.1|CDC42|ENSG00000070831.11|cell division cycle 42 	ENST00000344548.3|CDC42|ENSG00000070831.11|cell division cycle 42
hg19_v2_chrX_+_13707235_13707286	0.0126372	AAGGUGC	ENST00000464506.1|RAB9A|ENSG00000123595.5|RAB9A, member RAS oncogene family
hg19_v2_chr1_-_57889687_57889754	0.0124579	AAGGUGC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr1_-_109506036_109506129	0.0122775	AAGGUGC	ENST00000369976.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000356970.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000357393.4|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000369971.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000415331.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1
hg19_v2_chr19_-_46000251_46000319	0.0120443	AAGGUGC	ENST00000590526.1|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000344680.4|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000245923.4|RTN2|ENSG00000125744.7|reticulon 2
hg19_v2_chr4_+_79697495_79697538	0.0115879	AAGGUGC	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr3_-_169899504_169899542	0.0113093	AAGGUGC	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr20_+_60697480_60697583	0.0109636	AAGGUGC	ENST00000370915.1|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000253001.4|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000400318.2|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279068.6|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279069.7|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr1_+_62208091_62208182	0.0109222	AAGGUGC	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr16_-_57219966_57220028	0.0107627	AAGGUGC	ENST00000565760.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000309137.8|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000570184.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000562324.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A
hg19_v2_chr5_-_142783175_142783297	0.010467	AAGGUGC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr5_-_59189545_59189625	0.0102604	AAGGUGC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr7_+_129074266_129074306	0.0101933	AAGGUGC	ENST00000249344.2|STRIP2|ENSG00000128578.5|striatin interacting protein 2 	ENST00000435494.2|STRIP2|ENSG00000128578.5|striatin interacting protein 2
hg19_v2_chr9_+_125703282_125703337	0.00996733	AAGGUGC	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr1_+_162467595_162467655	0.00947964	AAGGUGC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr17_-_62340581_62340671	0.00930012	AAGGUGC	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr4_-_42659102_42659161	0.00925708	AAGGUGC	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr10_+_102222798_102222798	0.00859801	AAGGUGC	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr9_+_96338860_96338939	0.00858538	AAGGUGC	ENST00000375376.4|PHF2|ENSG00000197724.6|PHD finger protein 2
hg19_v2_chr1_-_51425902_51425976	0.00846987	AAGGUGC	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr1_+_78245303_78245351	0.00840957	AAGGUGC	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr3_+_152017181_152017229	0.00821418	AAGGUGC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chrX_-_24045303_24045303	0.00816075	AAGGUGC	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr5_-_73937244_73937274	0.00810967	AAGGUGC	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr17_+_40834580_40834633	0.00782152	AAGGUGC	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr3_-_33481835_33481905	0.00781218	AAGGUGC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr1_-_120612240_120612288	0.0074517	AAGGUGC	ENST00000256646.2|NOTCH2|ENSG00000134250.13|notch 2
hg19_v2_chr6_-_94129244_94129284	0.00735288	AAGGUGC	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr5_-_78809950_78810040	0.00733698	AAGGUGC	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr11_-_79151695_79151710	0.00691314	AAGGUGC	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr5_+_96271141_96271168	0.00665188	AAGGUGC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr10_-_735553_735683	0.00661956	AAGGUGC	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr9_+_116638562_116638606	0.00626466	AAGGUGC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chrX_-_19905703_19905724	0.00612759	AAGGUGC	ENST00000397821.3|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr12_+_54943134_54943182	0.00595666	AAGGUGC	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr12_+_50690489_50690489	0.00585422	AAGGUGC	ENST00000598429.1|AC140061.12|ENSG00000269529.1|Uncharacterized protein
hg19_v2_chr11_+_94822968_94823042	0.00535416	AAGGUGC	ENST00000278505.4|ENDOD1|ENSG00000149218.4|endonuclease domain containing 1
hg19_v2_chr16_-_74640986_74641022	0.0053025	AAGGUGC	ENST00000422840.2|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000565260.1|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000447066.2|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000205061.5|GLG1|ENSG00000090863.7|golgi glycoprotein 1
hg19_v2_chr6_-_53409890_53409927	0.00518523	AAGGUGC	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr10_-_71930222_71930280	0.00503461	AAGGUGC	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr2_-_9143786_9143942	0.00494007	AAGGUGC	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr15_+_73344791_73344900	0.00471859	AAGGUGC	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr14_-_81687197_81687280	0.00456586	AAGGUGC	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr1_+_201617450_201617465	0.00441872	AAGGUGC	ENST00000295624.6|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367297.4|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367300.3|NAV1|ENSG00000134369.11|neuron navigator 1
hg19_v2_chr4_+_166794383_166794500	0.00413213	AAGGUGC	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr10_+_72575643_72575753	0.0040215	AAGGUGC	ENST00000373202.3|SGPL1|ENSG00000166224.12|sphingosine-1-phosphate lyase 1
hg19_v2_chr1_+_40862501_40862512	0.00386796	AAGGUGC	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr7_-_44924939_44924993	0.00372335	AAGGUGC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr14_+_55518349_55518423	0.00328448	AAGGUGC	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr10_-_98273668_98273688	0.00302229	AAGGUGC	ENST00000357947.3|TLL2|ENSG00000095587.8|tolloid-like 2
hg19_v2_chr10_+_133918175_133918175	0.00297835	AAGGUGC	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr10_-_81205373_81205429	0.00264845	AAGGUGC	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr6_+_112408768_112408894	0.00216881	AAGGUGC	ENST00000368656.2|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B 	ENST00000604268.1|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B
hg19_v2_chr21_-_40685477_40685496	0.00177565	AAGGUGC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr5_-_139422654_139422898	0.00167385	AAGGUGC	ENST00000289409.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000358522.3|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000378238.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000289422.7|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000361474.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000545385.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000394770.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000541337.1|NRG2|ENSG00000158458.15|neuregulin 2
hg19_v2_chr11_+_109964087_109964123	0.00164047	AAGGUGC	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr15_-_56209306_56209344	0.00116623	AAGGUGC	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr9_+_140513438_140513483	0.0011574	AAGGUGC	ENST00000462484.1|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1 	ENST00000334856.6|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1 	ENST00000460843.1|EHMT1|ENSG00000181090.13|euchromatic histone-lysine N-methyltransferase 1
hg19_v2_chr1_+_100435315_100435345	0.0011098	AAGGUGC	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr6_-_37665751_37665781	0.000907694	AAGGUGC	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr20_+_30865429_30865480	0.000783115	AAGGUGC	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr17_-_1395954_1396106	0.000531465	AAGGUGC	ENST00000359786.5|MYO1C|ENSG00000197879.10|myosin IC
hg19_v2_chr22_+_38093005_38093067	0.000285765	AAGGUGC	ENST00000406386.3|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr5_+_122424816_122424944	9.5505e-05	AAGGUGC	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
