hg19_v2_chr14_-_34931458_34931562	0.11126	AACAGUC	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chrY_+_14813160_14813160	0.0842394	AACAGUC	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr5_+_157170703_157170758	0.07414	AACAGUC	ENST00000286307.5|LSM11|ENSG00000155858.5|LSM11, U7 small nuclear RNA associated
hg19_v2_chr3_+_197687071_197687128	0.0695992	AACAGUC	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr5_-_98262240_98262240	0.0687782	AACAGUC	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr5_+_138678131_138678169	0.0651006	AACAGUC	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr11_-_32452357_32452363	0.0619231	AACAGUC	ENST00000379079.2|WT1|ENSG00000184937.8|Wilms tumor 1 	ENST00000530998.1|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr5_+_137801160_137801179	0.0604959	AACAGUC	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr12_-_76953284_76953341	0.0587752	AACAGUC	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr2_+_157291953_157292003	0.058316	AACAGUC	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr1_-_91487013_91487070	0.0580382	AACAGUC	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr12_+_4918342_4918475	0.0490881	AACAGUC	ENST00000280684.3|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6 	ENST00000433855.1|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6
hg19_v2_chr18_-_45456930_45456970	0.0489443	AACAGUC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr1_+_97187318_97187380	0.0480438	AACAGUC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr5_+_86564739_86564791	0.0457965	AACAGUC	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr5_+_60628074_60628100	0.045439	AACAGUC	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr6_-_111136513_111136525	0.0450051	AACAGUC	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr5_-_114880533_114880591	0.0446501	AACAGUC	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr17_+_21279509_21279697	0.0444655	AACAGUC	ENST00000583088.1|KCNJ12|ENSG00000184185.5|potassium inwardly-rectifying channel, subfamily J, member 12
hg19_v2_chrX_-_135056216_135056227	0.0419954	AACAGUC	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr2_+_48010221_48010307	0.0416011	AACAGUC	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr18_-_29264669_29264717	0.0414262	AACAGUC	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr15_+_44719394_44719579	0.0412488	AACAGUC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr10_+_5454505_5454540	0.0403534	AACAGUC	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr11_+_34073195_34073266	0.0389526	AACAGUC	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr18_-_23670546_23670605	0.0382176	AACAGUC	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr6_-_132272504_132272519	0.0374562	AACAGUC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr3_+_180630090_180630311	0.0374134	AACAGUC	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr17_+_57784826_57784883	0.0369932	AACAGUC	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr14_-_30396948_30396998	0.0366914	AACAGUC	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr11_+_18344106_18344143	0.0364188	AACAGUC	ENST00000534641.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000525831.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000265963.4|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa
hg19_v2_chr15_-_69113218_69113250	0.0359066	AACAGUC	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr2_-_39348137_39348212	0.0358969	AACAGUC	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr7_+_12250886_12250933	0.0356217	AACAGUC	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr14_-_58894332_58894380	0.0356123	AACAGUC	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr15_-_59225844_59225855	0.0353516	AACAGUC	ENST00000380516.2|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr15_+_38544476_38544574	0.0341769	AACAGUC	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr4_+_111397216_111397250	0.0331553	AACAGUC	ENST00000265162.5|ENPEP|ENSG00000138792.5|glutamyl aminopeptidase (aminopeptidase A)
hg19_v2_chr17_-_16118835_16118867	0.0329465	AACAGUC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr3_-_9291063_9291136	0.032366	AACAGUC	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr11_+_119019722_119019769	0.0323612	AACAGUC	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr13_+_48877895_48877929	0.0323267	AACAGUC	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr2_+_32288725_32288776	0.0321064	AACAGUC	ENST00000315285.3|SPAST|ENSG00000021574.7|spastin
hg19_v2_chr9_+_15553055_15553101	0.0317254	AACAGUC	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr1_-_23670817_23670829	0.0313321	AACAGUC	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr22_+_35653445_35653501	0.0308094	AACAGUC	ENST00000420166.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000444518.2|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000455359.1|HMGXB4|ENSG00000100281.9|HMG box domain containing 4 	ENST00000216106.5|HMGXB4|ENSG00000100281.9|HMG box domain containing 4
hg19_v2_chr1_-_53018654_53018777	0.0303182	AACAGUC	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr13_-_41240717_41240735	0.0302341	AACAGUC	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr8_-_119634141_119634234	0.0301834	AACAGUC	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr4_+_52709229_52709345	0.0299669	AACAGUC	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr5_+_61602055_61602083	0.0291004	AACAGUC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr9_-_88714421_88714506	0.028937	AACAGUC	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr8_-_11324273_11324289	0.0288937	AACAGUC	ENST00000284486.4|FAM167A|ENSG00000154319.10|family with sequence similarity 167, member A
hg19_v2_chr15_+_49715293_49715448	0.028591	AACAGUC	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr18_-_18691739_18691812	0.0284838	AACAGUC	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr13_-_50510434_50510490	0.0283192	AACAGUC	ENST00000361840.3|SPRYD7|ENSG00000123178.10|SPRY domain containing 7
hg19_v2_chr9_+_103204553_103204560	0.0279931	AACAGUC	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr3_+_62304712_62304732	0.0271248	AACAGUC	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr4_+_48343339_48343414	0.0270678	AACAGUC	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr5_-_139726181_139726216	0.0268799	AACAGUC	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr17_-_65362678_65362743	0.026625	AACAGUC	ENST00000357146.4|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 	ENST00000356126.3|PSMD12|ENSG00000197170.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
hg19_v2_chr10_+_88516396_88516426	0.0265217	AACAGUC	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr1_+_39456895_39456986	0.0261218	AACAGUC	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr1_+_222791417_222791455	0.0258499	AACAGUC	ENST00000344922.5|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344441.6|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3 	ENST00000344507.1|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr18_+_9913977_9914088	0.0256122	AACAGUC	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr17_-_40833858_40833861	0.0255161	AACAGUC	ENST00000332438.4|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chr16_-_47007545_47007699	0.0252556	AACAGUC	ENST00000317089.5|DNAJA2|ENSG00000069345.7|DnaJ (Hsp40) homolog, subfamily A, member 2
hg19_v2_chr1_-_235491462_235491534	0.0252339	AACAGUC	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr2_+_85198216_85198305	0.0250742	AACAGUC	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr7_-_26904317_26904362	0.0250294	AACAGUC	ENST00000345317.2|SKAP2|ENSG00000005020.8|src kinase associated phosphoprotein 2
hg19_v2_chr6_+_42749759_42749780	0.0241332	AACAGUC	ENST00000314073.5|GLTSCR1L|ENSG00000112624.8|GLTSCR1-like
hg19_v2_chr7_+_114562172_114562243	0.0240887	AACAGUC	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr20_-_60640866_60640901	0.0239335	AACAGUC	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr1_-_57889687_57889754	0.0238956	AACAGUC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr22_+_41487711_41487798	0.0238725	AACAGUC	ENST00000263253.7|EP300|ENSG00000100393.9|E1A binding protein p300
hg19_v2_chr10_-_15210666_15210707	0.0237575	AACAGUC	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr14_-_90085458_90085557	0.0235705	AACAGUC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr2_+_85360499_85360598	0.0233346	AACAGUC	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr8_-_74884511_74884546	0.0232016	AACAGUC	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr16_-_46865047_46865103	0.0223393	AACAGUC	ENST00000394806.2|C16orf87|ENSG00000155330.5|chromosome 16 open reading frame 87
hg19_v2_chr9_+_103235365_103235419	0.0218817	AACAGUC	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr10_-_32636106_32636150	0.0212307	AACAGUC	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr7_-_75988321_75988348	0.0211918	AACAGUC	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr14_-_31676964_31677017	0.0211626	AACAGUC	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr1_-_244013384_244013430	0.0208783	AACAGUC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr7_-_111846435_111846471	0.0206341	AACAGUC	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr2_-_65357225_65357267	0.0204095	AACAGUC	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr13_+_114238997_114239077	0.0203676	AACAGUC	ENST00000538138.1|TFDP1|ENSG00000198176.8|transcription factor Dp-1 	ENST00000375370.5|TFDP1|ENSG00000198176.8|transcription factor Dp-1
hg19_v2_chr9_+_129622904_129622956	0.020211	AACAGUC	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr6_+_110501344_110501412	0.020057	AACAGUC	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr2_-_151344172_151344243	0.0197373	AACAGUC	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr12_+_66217911_66218018	0.0195884	AACAGUC	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr4_+_144257915_144258009	0.0195594	AACAGUC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr5_+_14664762_14664868	0.0194335	AACAGUC	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr10_-_102027420_102027442	0.0187448	AACAGUC	ENST00000354105.4|CWF19L1|ENSG00000095485.12|CWF19-like 1, cell cycle control (S. pombe)
hg19_v2_chr5_+_153825510_153825529	0.0181926	AACAGUC	ENST00000297109.6|SAP30L|ENSG00000164576.7|SAP30-like
hg19_v2_chr1_-_169863016_169863109	0.0180783	AACAGUC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr8_-_30670384_30670394	0.0178887	AACAGUC	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr10_+_114709999_114710031	0.017403	AACAGUC	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr6_+_111195973_111195994	0.0173417	AACAGUC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr3_+_178866199_178866311	0.0173008	AACAGUC	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr6_+_87865262_87865339	0.0169143	AACAGUC	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr12_+_68042495_68042508	0.0168054	AACAGUC	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr1_+_57110972_57111062	0.0165958	AACAGUC	ENST00000371244.4|PRKAA2|ENSG00000162409.6|protein kinase, AMP-activated, alpha 2 catalytic subunit
hg19_v2_chr7_+_94139105_94139197	0.0162709	AACAGUC	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr15_+_50716576_50716624	0.0160886	AACAGUC	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr13_-_77900814_77900935	0.015903	AACAGUC	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr8_-_41909496_41909512	0.0158716	AACAGUC	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr16_+_83841448_83841560	0.0155361	AACAGUC	ENST00000433866.2|HSBP1|ENSG00000230989.2|heat shock factor binding protein 1
hg19_v2_chr3_+_169684553_169684616	0.0152863	AACAGUC	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chrX_+_12156582_12156603	0.015282	AACAGUC	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr14_+_102228123_102228237	0.0148852	AACAGUC	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr4_+_144106080_144106144	0.0148346	AACAGUC	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr11_-_12030629_12030644	0.0148056	AACAGUC	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr1_-_93645818_93645918	0.0146387	AACAGUC	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr3_+_37493610_37493651	0.0142285	AACAGUC	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr7_+_128379346_128379447	0.0135487	AACAGUC	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr17_-_48785216_48785291	0.0135327	AACAGUC	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr2_-_157189180_157189290	0.0133099	AACAGUC	ENST00000539077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000424077.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000426264.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000339562.4|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2 	ENST00000421709.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr10_+_93683519_93683594	0.0131806	AACAGUC	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr4_+_26862400_26862416	0.0130384	AACAGUC	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr12_+_69633317_69633366	0.0129942	AACAGUC	ENST00000435070.2|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr12_+_62654119_62654142	0.0129528	AACAGUC	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr22_-_37099555_37099603	0.0128964	AACAGUC	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr8_+_133787586_133787673	0.0128269	AACAGUC	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr5_-_132299313_132299334	0.0128222	AACAGUC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr10_-_131762105_131762105	0.0127895	AACAGUC	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr11_-_47198380_47198448	0.0125922	AACAGUC	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr17_-_73775839_73775868	0.0124389	AACAGUC	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr14_+_39644387_39644417	0.0122492	AACAGUC	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr6_+_163835669_163835693	0.0119363	AACAGUC	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr6_+_13615554_13615601	0.0119033	AACAGUC	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr4_+_124320665_124320702	0.0118798	AACAGUC	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr3_+_107241783_107241850	0.0118533	AACAGUC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr4_-_1714037_1714071	0.0118296	AACAGUC	ENST00000488267.1|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000429429.2|SLBP|ENSG00000163950.8|stem-loop binding protein 	ENST00000480936.1|SLBP|ENSG00000163950.8|stem-loop binding protein
hg19_v2_chr17_-_41277467_41277510	0.0116687	AACAGUC	ENST00000494123.1|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000346315.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000309486.4|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000468300.1|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000354071.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000352993.3|BRCA1|ENSG00000012048.15|breast cancer 1, early onset 	ENST00000471181.2|BRCA1|ENSG00000012048.15|breast cancer 1, early onset
hg19_v2_chr7_-_139876812_139876860	0.0115014	AACAGUC	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr12_+_70636765_70636817	0.011429	AACAGUC	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr18_-_5895954_5895954	0.0112603	AACAGUC	ENST00000581347.2|TMEM200C|ENSG00000206432.4|transmembrane protein 200C
hg19_v2_chr14_-_64010046_64010107	0.0111762	AACAGUC	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr10_+_114206956_114207040	0.010913	AACAGUC	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr15_-_31283798_31283851	0.0109112	AACAGUC	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr4_-_120550146_120550201	0.0108133	AACAGUC	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr1_+_209859510_209859550	0.0107348	AACAGUC	ENST00000367028.2|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1 	ENST00000261465.1|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v2_chr1_-_154842741_154842772	0.0105953	AACAGUC	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr7_+_107384142_107384173	0.0105201	AACAGUC	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr3_+_139654018_139654039	0.0103186	AACAGUC	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr5_-_131826457_131826514	0.0101105	AACAGUC	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr4_+_57138437_57138570	0.0100352	AACAGUC	ENST00000504228.1|KIAA1211|ENSG00000109265.8|KIAA1211 	ENST00000541073.1|KIAA1211|ENSG00000109265.8|KIAA1211
hg19_v2_chr8_+_67579807_67579887	0.00953362	AACAGUC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr12_-_72057638_72057749	0.0095077	AACAGUC	ENST00000552037.1|ZFC3H1|ENSG00000133858.11|zinc finger, C3H1-type containing 	ENST00000378743.3|ZFC3H1|ENSG00000133858.11|zinc finger, C3H1-type containing
hg19_v2_chr9_-_16870704_16870841	0.00943835	AACAGUC	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr2_+_32390925_32390941	0.00927199	AACAGUC	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chr5_+_78532003_78532017	0.00922786	AACAGUC	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr9_+_115249100_115249358	0.00906393	AACAGUC	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr9_+_128024067_128024190	0.0089402	AACAGUC	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr5_-_111093406_111093458	0.00884868	AACAGUC	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr20_+_32077880_32077951	0.00875301	AACAGUC	ENST00000342704.6|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000375279.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chrX_+_40944871_40944888	0.00848147	AACAGUC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr11_-_70507901_70507958	0.00828738	AACAGUC	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr22_+_29168652_29168770	0.00790533	AACAGUC	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr8_+_38614807_38614851	0.00768264	AACAGUC	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr14_-_61190754_61190852	0.00745509	AACAGUC	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr1_+_200708671_200708744	0.00743532	AACAGUC	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr9_-_3525968_3526016	0.00726453	AACAGUC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr3_-_119813264_119813272	0.0071945	AACAGUC	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr6_+_84569359_84569445	0.00714643	AACAGUC	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chr14_-_21905395_21905419	0.00712673	AACAGUC	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr12_+_113229737_113229821	0.00683568	AACAGUC	ENST00000551052.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000415485.3|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr15_+_79575073_79575146	0.006815	AACAGUC	ENST00000421388.2|ANKRD34C|ENSG00000235711.3|ankyrin repeat domain 34C
hg19_v2_chr10_-_13390270_13390316	0.00669947	AACAGUC	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr17_+_30677136_30677205	0.00648977	AACAGUC	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr4_+_699537_699600	0.0064499	AACAGUC	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr5_-_83680603_83680617	0.00626105	AACAGUC	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr20_+_57226284_57226345	0.00622132	AACAGUC	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr5_+_122424816_122424944	0.00618515	AACAGUC	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chr14_-_35182994_35183034	0.00616636	AACAGUC	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr1_+_215256467_215256622	0.00605955	AACAGUC	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr6_-_139695757_139695795	0.00599937	AACAGUC	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr3_+_186501336_186501386	0.00575623	AACAGUC	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr3_-_122233723_122233797	0.00563969	AACAGUC	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr1_-_115300592_115300648	0.00561672	AACAGUC	ENST00000261443.5|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000534699.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000339438.6|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000529046.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000525970.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000369530.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000530886.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
hg19_v2_chr14_-_38064198_38064239	0.00545229	AACAGUC	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr14_-_95786200_95786257	0.00528182	AACAGUC	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chr14_-_93799360_93799438	0.00515903	AACAGUC	ENST00000334746.5|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000554565.1|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000298896.3|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7
hg19_v2_chr13_+_100258907_100258953	0.00491956	AACAGUC	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr10_+_69644404_69644427	0.00489662	AACAGUC	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr1_+_244816237_244816357	0.00456401	AACAGUC	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr15_+_41709302_41709348	0.00437008	AACAGUC	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr5_-_150948414_150948505	0.00436667	AACAGUC	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr16_+_69599861_69599887	0.004188	AACAGUC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr5_+_135468516_135468621	0.00404187	AACAGUC	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr9_+_32783497_32783551	0.00399999	AACAGUC	ENST00000342743.5|TMEM215|ENSG00000188133.5|transmembrane protein 215
hg19_v2_chr7_-_42971759_42971822	0.00382149	AACAGUC	ENST00000538645.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000445517.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000223321.4|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2
hg19_v2_chr9_-_74383799_74383818	0.00368864	AACAGUC	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr11_+_64009072_64009220	0.00351553	AACAGUC	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr5_-_140998616_140998639	0.00349642	AACAGUC	ENST00000389054.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398562.2|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000389057.5|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398566.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398557.4|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000253811.6|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1
hg19_v2_chr14_-_54908043_54908149	0.00343854	AACAGUC	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr12_-_31945172_31945178	0.00340503	AACAGUC	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr5_-_146833485_146833522	0.00326301	AACAGUC	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr15_+_72766651_72766680	0.00300083	AACAGUC	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr1_-_149889382_149889434	0.0029959	AACAGUC	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr8_-_93115445_93115462	0.0029289	AACAGUC	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr3_+_43732362_43732408	0.00292517	AACAGUC	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr2_-_26101374_26101389	0.00288691	AACAGUC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr4_+_55095264_55095390	0.00288334	AACAGUC	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr9_+_133454943_133455020	0.0027485	AACAGUC	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr2_+_12857015_12857041	0.00250504	AACAGUC	ENST00000155926.4|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr1_-_38019878_38019905	0.00240245	AACAGUC	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr2_-_27632390_27632554	0.00204052	AACAGUC	ENST00000350803.4|PPM1G|ENSG00000115241.9|protein phosphatase, Mg2+/Mn2+ dependent, 1G 	ENST00000344034.4|PPM1G|ENSG00000115241.9|protein phosphatase, Mg2+/Mn2+ dependent, 1G
hg19_v2_chr22_-_22221900_22221970	0.00203094	AACAGUC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr9_+_115983808_115983880	0.0020156	AACAGUC	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr5_-_1445539_1445558	0.00200032	AACAGUC	ENST00000270349.9|SLC6A3|ENSG00000142319.14|solute carrier family 6 (neurotransmitter transporter), member 3
hg19_v2_chr2_-_99552620_99552722	0.00193177	AACAGUC	ENST00000428096.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000397899.2|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000420294.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like
hg19_v2_chr3_-_15563229_15563265	0.0017931	AACAGUC	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr12_-_117628333_117628339	0.00172918	AACAGUC	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr4_+_144434584_144434709	0.00164699	AACAGUC	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr16_-_79634595_79634620	0.00158714	AACAGUC	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr13_+_28813645_28813770	0.00156755	AACAGUC	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr4_+_7045042_7045262	0.00147486	AACAGUC	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr7_-_14029515_14029642	0.00130909	AACAGUC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr19_+_18794470_18794512	0.00113486	AACAGUC	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr6_-_116381918_116381977	0.00106318	AACAGUC	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr1_+_20208870_20209006	0.000741417	AACAGUC	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr20_-_4982132_4982164	0.000711116	AACAGUC	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr1_+_26798955_26799010	0.000689283	AACAGUC	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr18_+_49866496_49866548	0.000322032	AACAGUC	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr11_-_94964354_94964374	0.000310947	AACAGUC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr5_-_139422654_139422898	0.000171776	AACAGUC	ENST00000289409.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000358522.3|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000378238.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000289422.7|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000361474.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000545385.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000394770.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000541337.1|NRG2|ENSG00000158458.15|neuregulin 2
hg19_v2_chr8_-_122653630_122653661	5.13824e-05	AACAGUC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
