A549 cells infected with IAV Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
TFAP2A | hg19_v2_chr6_-_10413112_10413132 | 0.95 | 5.2e-02 | Click! |
ZNF711 | hg19_v2_chrX_+_84499081_84499115 | -0.41 | 5.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_121493717 Show fit | 3.76 |
ENST00000418323.1
|
GLI family zinc finger 2 |
|
chr11_-_568369 Show fit | 3.42 |
ENST00000534540.1
ENST00000528245.1 ENST00000500447.1 ENST00000533920.1 |
MIR210 host gene (non-protein coding) |
|
chr14_-_50999190 Show fit | 2.53 |
ENST00000557390.1
|
mitogen-activated protein kinase kinase kinase kinase 5 |
|
chr9_-_139981121 Show fit | 2.53 |
ENST00000596585.1
|
Uncharacterized protein |
|
chr4_+_76649753 Show fit | 2.41 |
ENST00000603759.1
|
USO1 vesicle transport factor |
|
chr16_-_28223229 Show fit | 2.39 |
ENST00000566073.1
|
exportin 6 |
|
chr11_+_43702322 Show fit | 2.30 |
ENST00000395700.4
|
hydroxysteroid (17-beta) dehydrogenase 12 |
|
chr11_+_71934962 Show fit | 2.20 |
ENST00000543234.1
|
inositol polyphosphate phosphatase-like 1 |
|
chr4_+_6784358 Show fit | 2.20 |
ENST00000508423.1
|
KIAA0232 |
|
chr5_+_149865377 Show fit | 2.11 |
ENST00000522491.1
|
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.5 | GO:0030210 | heparin metabolic process(GO:0030202) heparin biosynthetic process(GO:0030210) |
0.1 | 4.6 | GO:0000185 | activation of MAPKKK activity(GO:0000185) |
1.3 | 3.8 | GO:0021776 | smoothened signaling pathway involved in ventral spinal cord interneuron specification(GO:0021775) smoothened signaling pathway involved in spinal cord motor neuron cell fate specification(GO:0021776) |
0.6 | 3.6 | GO:0042986 | positive regulation of amyloid precursor protein biosynthetic process(GO:0042986) |
0.2 | 3.2 | GO:0045945 | positive regulation of transcription from RNA polymerase III promoter(GO:0045945) |
0.1 | 3.0 | GO:0018345 | protein palmitoylation(GO:0018345) |
0.1 | 3.0 | GO:1904659 | hexose transmembrane transport(GO:0035428) glucose transmembrane transport(GO:1904659) |
1.0 | 2.9 | GO:0060829 | regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060827) negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829) |
0.7 | 2.9 | GO:0044778 | meiotic DNA integrity checkpoint(GO:0044778) |
0.1 | 2.9 | GO:0006995 | cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.3 | GO:0000139 | Golgi membrane(GO:0000139) |
0.1 | 4.8 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
0.0 | 4.7 | GO:0035577 | azurophil granule membrane(GO:0035577) |
0.0 | 4.6 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.1 | 4.3 | GO:0097542 | ciliary tip(GO:0097542) |
0.1 | 4.2 | GO:0012507 | ER to Golgi transport vesicle membrane(GO:0012507) |
0.4 | 3.3 | GO:0030896 | checkpoint clamp complex(GO:0030896) |
0.1 | 3.0 | GO:0008074 | guanylate cyclase complex, soluble(GO:0008074) |
0.1 | 2.9 | GO:0034992 | microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993) |
0.0 | 2.9 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.6 | GO:0017091 | AU-rich element binding(GO:0017091) |
0.2 | 4.3 | GO:0008349 | MAP kinase kinase kinase kinase activity(GO:0008349) |
0.2 | 3.8 | GO:0055056 | D-glucose transmembrane transporter activity(GO:0055056) |
0.1 | 3.7 | GO:0019707 | protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707) |
0.0 | 3.5 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.5 | 3.4 | GO:0050119 | N-acetylglucosamine deacetylase activity(GO:0050119) |
0.1 | 3.0 | GO:0004383 | guanylate cyclase activity(GO:0004383) |
0.1 | 2.9 | GO:0071889 | 14-3-3 protein binding(GO:0071889) |
0.0 | 2.9 | GO:0050699 | WW domain binding(GO:0050699) |
0.2 | 2.6 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.1 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 4.3 | PID TNF PATHWAY | TNF receptor signaling pathway |
0.0 | 3.5 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.1 | 3.3 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.1 | 2.9 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 2.7 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 2.5 | PID ARF 3PATHWAY | Arf1 pathway |
0.0 | 2.5 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 2.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 2.0 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
0.2 | 4.6 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |
0.1 | 3.9 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.2 | 3.5 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.1 | 3.4 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.1 | 3.0 | REACTOME PYRIMIDINE METABOLISM | Genes involved in Pyrimidine metabolism |
0.0 | 3.0 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 2.8 | REACTOME REGULATION OF KIT SIGNALING | Genes involved in Regulation of KIT signaling |
0.1 | 2.6 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 2.6 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |