ISMARA results: ARID3A

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A549 cells infected with IAV Analysis Results (GEO series: GSE147507)

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Results for ARID3A

Z-value: 0.97

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Transcription factors associated with ARID3A

Gene Symbol	Gene ID	Gene Info
ARID3A Ensembl NCBI GeneCards UniProt	ENSG00000116017.6	AT-rich interaction domain 3A

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
ARID3A	hg19_v2_chr19_+_926000_926046	-0.80	2.0e-01	Click!

Activity profile of ARID3A motif

Sorted Z-values of ARID3A motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_+_159656437 Show fit	0.44	ENST00000402432.3	FABP6 Ensembl NCBI GeneCards UniProt Show fit	fatty acid binding protein 6, ileal
chr12_-_12714006 Show fit	0.42	ENST00000541207.1	DUSP16 Ensembl NCBI GeneCards UniProt Show fit	dual specificity phosphatase 16
chr2_-_191115229 Show fit	0.39	ENST00000409820.2 ENST00000410045.1	HIBCH Ensembl NCBI GeneCards UniProt Show fit	3-hydroxyisobutyryl-CoA hydrolase
chr7_+_65552756 Show fit	0.38	ENST00000450043.1	AC068533.7 Ensembl NCBI GeneCards UniProt Show fit	AC068533.7
chr17_-_15466742 Show fit	0.35	ENST00000584811.1 ENST00000419890.2	TVP23C Ensembl NCBI GeneCards UniProt Show fit	trans-golgi network vesicle protein 23 homolog C (S. cerevisiae)
chr19_+_11670245 Show fit	0.35	ENST00000585493.1	ZNF627 Ensembl NCBI GeneCards UniProt Show fit	zinc finger protein 627
chr4_-_170948361 Show fit	0.34	ENST00000393702.3	MFAP3L Ensembl NCBI GeneCards UniProt Show fit	microfibrillar-associated protein 3-like
chr1_-_235098935 Show fit	0.32	ENST00000423175.1	RP11-443B7.1 Ensembl NCBI GeneCards UniProt Show fit	RP11-443B7.1
chr1_+_207943667 Show fit	0.31	ENST00000462968.2	CD46 Ensembl NCBI GeneCards UniProt Show fit	CD46 molecule, complement regulatory protein
chr5_+_179135246 Show fit	0.31	ENST00000508787.1	CANX Ensembl NCBI GeneCards UniProt Show fit	calnexin

Showing 1 to 10 of 200 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of ARID3A

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.7	GO:0045209	MAPK phosphatase export from nucleus(GO:0045208) MAPK phosphatase export from nucleus, leptomycin B sensitive(GO:0045209)
0.0	0.6	GO:0036149	phosphatidylinositol acyl-chain remodeling(GO:0036149)
0.1	0.5	GO:0021840	directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842)
0.0	0.5	GO:0002291	T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291)
0.1	0.4	GO:1902283	negative regulation of primary amine oxidase activity(GO:1902283)
0.1	0.4	GO:0006574	valine catabolic process(GO:0006574)
0.0	0.4	GO:1901409	positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.0	0.4	GO:0034975	protein folding in endoplasmic reticulum(GO:0034975)
0.0	0.4	GO:0019433	triglyceride catabolic process(GO:0019433)
0.1	0.3	GO:2000302	synaptic vesicle recycling via endosome(GO:0036466) positive regulation of synaptic vesicle endocytosis(GO:1900244) positive regulation of synaptic vesicle recycling(GO:1903423) positive regulation of synaptic vesicle exocytosis(GO:2000302)

Showing 1 to 10 of 76 entries

Gene overrepresentation in cellular_component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	GO:0030673	axolemma(GO:0030673)
0.0	0.4	GO:0005916	fascia adherens(GO:0005916)
0.0	0.4	GO:0042101	T cell receptor complex(GO:0042101)
0.1	0.3	GO:0002079	inner acrosomal membrane(GO:0002079)
0.0	0.3	GO:0005947	mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.0	0.3	GO:0032389	MutLalpha complex(GO:0032389)
0.0	0.3	GO:0046696	lipopolysaccharide receptor complex(GO:0046696)
0.0	0.3	GO:0032777	Piccolo NuA4 histone acetyltransferase complex(GO:0032777)
0.0	0.3	GO:0044233	ER-mitochondrion membrane contact site(GO:0044233)
0.0	0.3	GO:0008091	spectrin(GO:0008091)

Showing 1 to 10 of 21 entries

Gene overrepresentation in molecular_function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.7	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0	0.6	GO:0047499	calcium-independent phospholipase A2 activity(GO:0047499)
0.0	0.5	GO:0005176	ErbB-2 class receptor binding(GO:0005176)
0.1	0.4	GO:0052595	tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.0	0.4	GO:0032052	bile acid binding(GO:0032052)
0.0	0.4	GO:0016289	CoA hydrolase activity(GO:0016289)
0.0	0.3	GO:0050692	DBD domain binding(GO:0050692)
0.0	0.3	GO:0032138	single base insertion or deletion binding(GO:0032138)
0.0	0.3	GO:0001875	lipopolysaccharide receptor activity(GO:0001875)
0.0	0.3	GO:0042731	PH domain binding(GO:0042731)

Showing 1 to 10 of 50 entries

Gene overrepresentation in C2:CP category:

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Total log-likelihood	Term	Description
0.7	PID P38 ALPHA BETA PATHWAY	Regulation of p38-alpha and p38-beta
0.5	PID ERBB NETWORK PATHWAY	ErbB receptor signaling network
0.4	PID TOLL ENDOGENOUS PATHWAY	Endogenous TLR signaling
0.3	PID SYNDECAN 3 PATHWAY	Syndecan-3-mediated signaling events

Showing 1 to 4 of 4 entries

Gene overrepresentation in C2:CP:REACTOME category:

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Total log-likelihood	Term	Description
0.6	REACTOME ACYL CHAIN REMODELLING OF PI	Genes involved in Acyl chain remodelling of PI
0.5	REACTOME SHC1 EVENTS IN ERBB4 SIGNALING	Genes involved in SHC1 events in ERBB4 signaling
0.5	REACTOME GRB2 SOS PROVIDES LINKAGE TO MAPK SIGNALING FOR INTERGRINS	Genes involved in GRB2:SOS provides linkage to MAPK signaling for Intergrins
0.4	REACTOME RECYCLING OF BILE ACIDS AND SALTS	Genes involved in Recycling of bile acids and salts
0.4	REACTOME IKK COMPLEX RECRUITMENT MEDIATED BY RIP1	Genes involved in IKK complex recruitment mediated by RIP1
0.4	REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM	Genes involved in Branched-chain amino acid catabolism
0.4	REACTOME TRAF6 MEDIATED IRF7 ACTIVATION	Genes involved in TRAF6 mediated IRF7 activation
0.1	REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1	Genes involved in Signaling by activated point mutants of FGFR1

Showing 1 to 8 of 8 entries

Results for ARID3A

Z-value: 0.97

Motif logo

Transcription factors associated with ARID3A

Activity-expression correlation:

Activity profile of ARID3A motif

Sorted Z-values of ARID3A motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of ARID3A

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category:

Gene overrepresentation in C2:CP category:

Gene overrepresentation in C2:CP:REACTOME category: