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A549 cells infected with IAV Analysis Results (GEO series: GSE147507)

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Results for ACUGGCC

Z-value: 0.35

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miRNA associated with seed ACUGGCC

NamemiRBASE accession
hsa-miR-193a-3p
MIMAT0000459
hsa-miR-193b-3p
MIMAT0002819

Activity profile of ACUGGCC motif

Sorted Z-values of ACUGGCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr17_+_68165657 0.23 ENST00000243457.3
KCNJ2
potassium inwardly-rectifying channel, subfamily J, member 2
chr22_+_24951436 0.09 ENST00000215829.3
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide 18kDa
chr2_+_176957619 0.08 ENST00000392539.3
HOXD13
homeobox D13
chr7_+_108210012 0.08 ENST00000249356.3
DNAJB9
DnaJ (Hsp40) homolog, subfamily B, member 9
chr1_+_218519577 0.07 ENST00000366930.4
ENST00000366929.4
TGFB2
transforming growth factor, beta 2
chr4_+_55524085 0.07 ENST00000412167.2
ENST00000288135.5
KIT
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
chr3_-_128902729 0.07 ENST00000451728.2
ENST00000446936.2
ENST00000502976.1
ENST00000500450.2
ENST00000441626.2
CNBP
CCHC-type zinc finger, nucleic acid binding protein
chr2_+_48541776 0.07 ENST00000413569.1
ENST00000340553.3
FOXN2
forkhead box N2
chr3_-_33481835 0.06 ENST00000283629.3
UBP1
upstream binding protein 1 (LBP-1a)
chr6_+_86159821 0.06 ENST00000369651.3
NT5E
5'-nucleotidase, ecto (CD73)
chr1_+_182992545 0.06 ENST00000258341.4
LAMC1
laminin, gamma 1 (formerly LAMB2)
chr7_-_26904317 0.06 ENST00000345317.2
SKAP2
src kinase associated phosphoprotein 2
chr15_+_44719394 0.05 ENST00000260327.4
ENST00000396780.1
CTDSPL2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr17_-_66287257 0.05 ENST00000327268.4
SLC16A6
solute carrier family 16, member 6
chr13_+_111365602 0.05 ENST00000333219.7
ING1
inhibitor of growth family, member 1
chr8_-_101965146 0.04 ENST00000395957.2
ENST00000395948.2
ENST00000457309.1
YWHAZ
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
chr2_+_14772810 0.04 ENST00000295092.2
ENST00000331243.4
FAM84A
family with sequence similarity 84, member A
chr10_+_70480963 0.04 ENST00000265872.6
ENST00000535016.1
ENST00000538031.1
ENST00000543719.1
ENST00000539539.1
ENST00000543225.1
ENST00000536012.1
ENST00000494903.2
CCAR1
cell division cycle and apoptosis regulator 1
chr11_+_34073195 0.04 ENST00000341394.4
CAPRIN1
cell cycle associated protein 1
chr10_-_94333784 0.04 ENST00000265986.6
IDE
insulin-degrading enzyme
chr11_-_77532050 0.04 ENST00000308488.6
RSF1
remodeling and spacing factor 1
chr12_+_79258547 0.04 ENST00000457153.2
SYT1
synaptotagmin I
chr1_-_26232951 0.03 ENST00000426559.2
ENST00000455785.2
STMN1
stathmin 1
chr17_-_65241281 0.03 ENST00000358691.5
ENST00000580168.1
HELZ
helicase with zinc finger
chr12_+_110437328 0.03 ENST00000261739.4
ANKRD13A
ankyrin repeat domain 13A
chr6_-_166075557 0.03 ENST00000539869.2
ENST00000366882.1
PDE10A
phosphodiesterase 10A
chr8_+_110552337 0.03 ENST00000337573.5
EBAG9
estrogen receptor binding site associated, antigen, 9
chr14_+_102228123 0.03 ENST00000422945.2
ENST00000554442.1
ENST00000556260.2
ENST00000328724.5
ENST00000557268.1
PPP2R5C
protein phosphatase 2, regulatory subunit B', gamma
chrX_+_151806637 0.03 ENST00000370306.2
GABRQ
gamma-aminobutyric acid (GABA) A receptor, theta
chr18_-_47013586 0.03 ENST00000318240.3
ENST00000579820.1
C18orf32
chromosome 18 open reading frame 32
chr1_+_145507587 0.03 ENST00000330165.8
ENST00000369307.3
RBM8A
RNA binding motif protein 8A
chr14_+_90863327 0.03 ENST00000356978.4
CALM1
calmodulin 1 (phosphorylase kinase, delta)
chr11_-_27494279 0.03 ENST00000379214.4
LGR4
leucine-rich repeat containing G protein-coupled receptor 4
chrX_-_24045303 0.03 ENST00000328046.8
KLHL15
kelch-like family member 15
chr14_-_50698276 0.03 ENST00000216373.5
SOS2
son of sevenless homolog 2 (Drosophila)
chr22_+_24666763 0.02 ENST00000437398.1
ENST00000421374.1
ENST00000314328.9
ENST00000541492.1
SPECC1L
sperm antigen with calponin homology and coiled-coil domains 1-like
chr5_+_172483347 0.02 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
CREBRF
CREB3 regulatory factor
chr12_-_25403737 0.02 ENST00000256078.4
ENST00000556131.1
ENST00000311936.3
ENST00000557334.1
KRAS
Kirsten rat sarcoma viral oncogene homolog
chr12_+_11802753 0.02 ENST00000396373.4
ETV6
ets variant 6
chr10_+_75670862 0.02 ENST00000446342.1
ENST00000372764.3
ENST00000372762.4
PLAU
plasminogen activator, urokinase
chr17_+_44668035 0.02 ENST00000398238.4
ENST00000225282.8
NSF
N-ethylmaleimide-sensitive factor
chr1_-_92351769 0.02 ENST00000212355.4
TGFBR3
transforming growth factor, beta receptor III
chr3_-_131221790 0.02 ENST00000512877.1
ENST00000264995.3
ENST00000511168.1
ENST00000425847.2
MRPL3
mitochondrial ribosomal protein L3
chr8_-_66546439 0.02 ENST00000276569.3
ARMC1
armadillo repeat containing 1
chr1_+_183155373 0.02 ENST00000493293.1
ENST00000264144.4
LAMC2
laminin, gamma 2
chr1_+_203764742 0.02 ENST00000432282.1
ENST00000453771.1
ENST00000367214.1
ENST00000367212.3
ENST00000332127.4
ZC3H11A
zinc finger CCCH-type containing 11A
chr2_+_204192942 0.02 ENST00000295851.5
ENST00000261017.5
ABI2
abl-interactor 2
chr10_-_38146510 0.02 ENST00000395867.3
ZNF248
zinc finger protein 248
chr8_-_30585439 0.02 ENST00000221130.5
GSR
glutathione reductase
chr5_-_133512683 0.02 ENST00000353411.6
SKP1
S-phase kinase-associated protein 1
chr2_+_242641442 0.02 ENST00000313552.6
ENST00000406941.1
ING5
inhibitor of growth family, member 5
chr13_-_99404875 0.02 ENST00000376503.5
SLC15A1
solute carrier family 15 (oligopeptide transporter), member 1
chr20_-_14318248 0.02 ENST00000378053.3
ENST00000341420.4
FLRT3
fibronectin leucine rich transmembrane protein 3
chr7_+_104654623 0.02 ENST00000311117.3
ENST00000334877.4
ENST00000257745.4
ENST00000334914.7
ENST00000478990.1
ENST00000495267.1
ENST00000476671.1
KMT2E
lysine (K)-specific methyltransferase 2E
chr3_+_132136331 0.02 ENST00000260818.6
DNAJC13
DnaJ (Hsp40) homolog, subfamily C, member 13
chr1_-_169863016 0.02 ENST00000367772.4
ENST00000367771.6
SCYL3
SCY1-like 3 (S. cerevisiae)
chr3_-_123603137 0.02 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
MYLK
myosin light chain kinase
chr6_-_75994536 0.02 ENST00000475111.2
ENST00000230461.6
TMEM30A
transmembrane protein 30A
chr2_+_139259324 0.02 ENST00000280098.4
SPOPL
speckle-type POZ protein-like
chr12_-_56236711 0.02 ENST00000409200.3
MMP19
matrix metallopeptidase 19
chr12_+_56623827 0.02 ENST00000424625.1
ENST00000419753.1
ENST00000454355.2
ENST00000417965.1
ENST00000436633.1
SLC39A5
solute carrier family 39 (zinc transporter), member 5
chr11_+_120207787 0.02 ENST00000397843.2
ENST00000356641.3
ARHGEF12
Rho guanine nucleotide exchange factor (GEF) 12
chr5_+_38846101 0.02 ENST00000274276.3
OSMR
oncostatin M receptor
chrX_-_40594755 0.02 ENST00000324817.1
MED14
mediator complex subunit 14
chr11_+_33563821 0.02 ENST00000321505.4
ENST00000265654.5
ENST00000389726.3
KIAA1549L
KIAA1549-like
chr20_+_42086525 0.01 ENST00000244020.3
SRSF6
serine/arginine-rich splicing factor 6
chr11_-_128392085 0.01 ENST00000526145.2
ENST00000531611.1
ENST00000319397.6
ENST00000345075.4
ENST00000535549.1
ETS1
v-ets avian erythroblastosis virus E26 oncogene homolog 1
chr9_-_95527079 0.01 ENST00000356884.6
ENST00000375512.3
BICD2
bicaudal D homolog 2 (Drosophila)
chr1_+_76540386 0.01 ENST00000328299.3
ST6GALNAC3
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr22_+_40390930 0.01 ENST00000333407.6
FAM83F
family with sequence similarity 83, member F
chr19_+_33166313 0.01 ENST00000334176.3
RGS9BP
regulator of G protein signaling 9 binding protein
chr6_+_39760783 0.01 ENST00000398904.2
ENST00000538976.1
DAAM2
dishevelled associated activator of morphogenesis 2
chr17_+_30677136 0.01 ENST00000394670.4
ENST00000321233.6
ENST00000394673.2
ENST00000341711.6
ENST00000579634.1
ENST00000580759.1
ENST00000342555.6
ENST00000577908.1
ENST00000394679.5
ENST00000582165.1
ZNF207
zinc finger protein 207
chr21_-_16437255 0.01 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr8_-_57123815 0.01 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
PLAG1
pleiomorphic adenoma gene 1
chr11_-_17035943 0.01 ENST00000355661.3
ENST00000532079.1
ENST00000448080.2
ENST00000531066.1
PLEKHA7
pleckstrin homology domain containing, family A member 7
chr9_-_135819987 0.01 ENST00000298552.3
ENST00000403810.1
TSC1
tuberous sclerosis 1
chr5_+_179921430 0.01 ENST00000393356.1
CNOT6
CCR4-NOT transcription complex, subunit 6
chr12_-_104234966 0.01 ENST00000392876.3
NT5DC3
5'-nucleotidase domain containing 3
chr17_-_38020392 0.01 ENST00000346872.3
ENST00000439167.2
ENST00000377945.3
ENST00000394189.2
ENST00000377944.3
ENST00000377958.2
ENST00000535189.1
ENST00000377952.2
IKZF3
IKAROS family zinc finger 3 (Aiolos)
chr9_-_3525968 0.01 ENST00000382004.3
ENST00000302303.1
ENST00000449190.1
RFX3
regulatory factor X, 3 (influences HLA class II expression)
chr14_-_27066636 0.01 ENST00000267422.7
ENST00000344429.5
ENST00000574031.1
ENST00000465357.2
ENST00000547619.1
NOVA1
neuro-oncological ventral antigen 1
chr1_+_15853308 0.01 ENST00000375838.1
ENST00000375847.3
ENST00000375849.1
DNAJC16
DnaJ (Hsp40) homolog, subfamily C, member 16
chrX_-_80065146 0.01 ENST00000373275.4
BRWD3
bromodomain and WD repeat domain containing 3
chr12_-_31744031 0.01 ENST00000389082.5
DENND5B
DENN/MADD domain containing 5B
chr22_-_32146106 0.01 ENST00000327423.6
ENST00000397493.2
ENST00000434485.1
ENST00000412743.1
PRR14L
proline rich 14-like
chr10_-_99052382 0.01 ENST00000453547.2
ENST00000316676.8
ENST00000358308.3
ENST00000466484.1
ENST00000358531.4
ARHGAP19-SLIT1
ARHGAP19
ARHGAP19-SLIT1 readthrough (NMD candidate)
Rho GTPase activating protein 19
chr3_-_57199397 0.01 ENST00000296318.7
IL17RD
interleukin 17 receptor D
chr14_+_57046500 0.01 ENST00000261556.6
TMEM260
transmembrane protein 260
chr13_+_98794810 0.01 ENST00000595437.1
FARP1
FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
chr7_-_14029515 0.01 ENST00000430479.1
ENST00000405218.2
ENST00000343495.5
ETV1
ets variant 1
chr2_+_12857015 0.01 ENST00000155926.4
TRIB2
tribbles pseudokinase 2
chr5_+_78532003 0.01 ENST00000396137.4
JMY
junction mediating and regulatory protein, p53 cofactor
chr4_+_41992489 0.01 ENST00000264451.7
SLC30A9
solute carrier family 30 (zinc transporter), member 9
chr10_+_97515409 0.01 ENST00000371207.3
ENST00000543964.1
ENTPD1
ectonucleoside triphosphate diphosphohydrolase 1
chr2_+_29204161 0.01 ENST00000379558.4
ENST00000403861.2
FAM179A
family with sequence similarity 179, member A
chr3_+_9773409 0.01 ENST00000433861.2
ENST00000424362.1
ENST00000383829.2
ENST00000302054.3
ENST00000420291.1
BRPF1
bromodomain and PHD finger containing, 1
chr1_+_111991474 0.01 ENST00000369722.3
ATP5F1
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
chr17_-_33416231 0.01 ENST00000584655.1
ENST00000447669.2
ENST00000315249.7
RFFL
ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
chr7_+_155250824 0.01 ENST00000297375.4
EN2
engrailed homeobox 2
chr2_+_113931513 0.01 ENST00000245796.6
ENST00000441564.3
PSD4
pleckstrin and Sec7 domain containing 4
chr1_-_67519782 0.01 ENST00000235345.5
SLC35D1
solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
chr9_-_37465396 0.01 ENST00000307750.4
ZBTB5
zinc finger and BTB domain containing 5
chr8_-_91095099 0.01 ENST00000265431.3
CALB1
calbindin 1, 28kDa
chr2_-_217560248 0.01 ENST00000233813.4
IGFBP5
insulin-like growth factor binding protein 5
chr8_-_93115445 0.01 ENST00000523629.1
RUNX1T1
runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr12_-_96794143 0.01 ENST00000543119.2
CDK17
cyclin-dependent kinase 17
chr11_-_71823796 0.00 ENST00000545680.1
ENST00000543587.1
ENST00000538393.1
ENST00000535234.1
ENST00000227618.4
ENST00000535503.1
ANAPC15
anaphase promoting complex subunit 15
chr15_+_84322827 0.00 ENST00000286744.5
ENST00000567476.1
ADAMTSL3
ADAMTS-like 3
chr9_+_131644388 0.00 ENST00000372600.4
LRRC8A
leucine rich repeat containing 8 family, member A
chr5_+_177540444 0.00 ENST00000274605.5
N4BP3
NEDD4 binding protein 3
chr16_-_28074822 0.00 ENST00000395724.3
ENST00000380898.2
ENST00000447459.2
GSG1L
GSG1-like
chr18_+_67068228 0.00 ENST00000382713.5
DOK6
docking protein 6
chr2_-_69870835 0.00 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr15_+_64443905 0.00 ENST00000325881.4
SNX22
sorting nexin 22
chr2_-_206950781 0.00 ENST00000403263.1
INO80D
INO80 complex subunit D
chr17_+_61627814 0.00 ENST00000310827.4
ENST00000431926.1
ENST00000415273.2
DCAF7
DDB1 and CUL4 associated factor 7
chr6_-_29527702 0.00 ENST00000377050.4
UBD
ubiquitin D
chr17_+_48796905 0.00 ENST00000505658.1
ENST00000393227.2
ENST00000240304.1
ENST00000311571.3
ENST00000505619.1
ENST00000544170.1
ENST00000510984.1
LUC7L3
LUC7-like 3 (S. cerevisiae)
chr12_-_111021110 0.00 ENST00000354300.3
PPTC7
PTC7 protein phosphatase homolog (S. cerevisiae)
chr20_+_57226284 0.00 ENST00000458280.1
ENST00000355957.5
ENST00000361770.5
ENST00000312283.8
ENST00000412911.1
ENST00000359617.4
ENST00000371141.4
STX16
syntaxin 16
chr7_-_143059845 0.00 ENST00000443739.2
FAM131B
family with sequence similarity 131, member B
chr2_-_161350305 0.00 ENST00000348849.3
RBMS1
RNA binding motif, single stranded interacting protein 1
chr10_-_100027943 0.00 ENST00000260702.3
LOXL4
lysyl oxidase-like 4
chr6_-_47277634 0.00 ENST00000296861.2
TNFRSF21
tumor necrosis factor receptor superfamily, member 21
chr2_-_38978492 0.00 ENST00000409276.1
ENST00000446327.2
ENST00000313117.6
SRSF7
serine/arginine-rich splicing factor 7
chr1_-_166028709 0.00 ENST00000595430.1
AL626787.1
AL626787.1
chrX_-_47479246 0.00 ENST00000295987.7
ENST00000340666.4
SYN1
synapsin I

Network of associatons between targets according to the STRING database.

First level regulatory network of ACUGGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.0 0.1 GO:0051795 apoptotic process involved in outflow tract morphogenesis(GO:0003275) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.0 0.1 GO:0038162 response to stem cell factor(GO:0036215) cellular response to stem cell factor stimulus(GO:0036216) Kit signaling pathway(GO:0038109) erythropoietin-mediated signaling pathway(GO:0038162)
0.0 0.1 GO:0046086 adenosine biosynthetic process(GO:0046086)
0.0 0.1 GO:0048619 embryonic hindgut morphogenesis(GO:0048619)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0005607 laminin-2 complex(GO:0005607)
0.0 0.1 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.0 0.1 GO:0005606 laminin-1 complex(GO:0005606) laminin-11 complex(GO:0043260)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0071209 U7 snRNA binding(GO:0071209)
0.0 0.1 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.0 0.2 GO:0086008 voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization(GO:0086008)
0.0 0.0 GO:0031626 beta-endorphin binding(GO:0031626)