hg19_v1_chr7_+_102553343_102553521	2.31174	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg19_v1_chr10_+_11207053_11207140	2.11384	SOX2.p2	AK297313|CELF2|10659|CUGBP, Elav-like family member 2	AK299992|CELF2|10659|CUGBP, Elav-like family member 2	AF036956|CELF2|10659|CUGBP, Elav-like family member 2	AK293164|CELF2|10659|CUGBP, Elav-like family member 2	AF432906|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr2_+_33359607_33359804	1.99099	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg19_v1_chr18_-_53177999_53177999	1.88949	SOX2.p2	AK096862|TCF4|6925|transcription factor 4	NM_001243231|TCF4|6925|transcription factor 4
hg19_v1_chr10_+_70847817_70847855	1.75383	SOX2.p2	NM_002727|SRGN|5552|serglycin
hg19_v1_chr10_+_11206928_11207010	1.67707	SOX2.p2	AK299983|CELF2|10659|CUGBP, Elav-like family member 2	NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2	NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr5_-_39424930_39424973	1.63981	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr1_+_84647342_84647342	1.61801	SOX2.p2	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr1_-_32801606_32801856	1.57588	SOX2.p2	AM393505|MARCKSL1|65108|MARCKS-like 1	DQ893237|MARCKSL1|65108|MARCKS-like 1	DQ896567|MARCKSL1|65108|MARCKS-like 1	X70326|MARCKSL1|65108|MARCKS-like 1	AL713653|MARCKSL1|65108|MARCKS-like 1	AY007131|MARCKSL1|65108|MARCKS-like 1	BC007904|MARCKSL1|65108|MARCKS-like 1	BC066915|MARCKSL1|65108|MARCKS-like 1	NM_023009|MARCKSL1|65108|MARCKS-like 1
hg19_v1_chrX_+_15518899_15519039	1.57375	SOX2.p2	NM_203281|BMX|660|BMX non-receptor tyrosine kinase	AK291824|BMX|660|BMX non-receptor tyrosine kinase	AK313568|BMX|660|BMX non-receptor tyrosine kinase	X83107|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr10_+_70847857_70847912	1.5618	SOX2.p2	D28395|SRGN|5552|serglycin	BC022313|SRGN|5552|serglycin	AK311873|SRGN|5552|serglycin	BC015516|SRGN|5552|serglycin	J03223|SRGN|5552|serglycin	X17042|SRGN|5552|serglycin
hg19_v1_chr4_-_101439071_101439249	1.54615	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg19_v1_chr10_+_11047274_11047297	1.46452	SOX2.p2	AF090693|CELF2|10659|CUGBP, Elav-like family member 2	AK297380|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr4_+_41258941_41259010	1.40049	SOX2.p2	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr2_-_188312872_188313020	1.38434	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg19_v1_chr5_+_15500288_15500310	1.38125	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg19_v1_chr18_-_52988916_52989089	1.37019	SOX2.p2	M74718|TCF4|6925|transcription factor 4	FR748220|TCF4|6925|transcription factor 4	FR748221|TCF4|6925|transcription factor 4	AK300038|TCF4|6925|transcription factor 4	NM_001243234|TCF4|6925|transcription factor 4	NM_001243235|TCF4|6925|transcription factor 4
hg19_v1_chr10_+_11047253_11047262	1.22394	SOX2.p2	NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2
hg19_v1_chr1_-_173174611_173174696	1.1905	SOX2.p2	AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg19_v1_chr1_+_86046434_86046668	1.16128	SOX2.p2	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61	NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61	Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61	U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61	BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61	AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61	DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61	CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61
hg19_v1_chr12_-_6233684_6233835	1.15693	SOX2.p2	X04385|VWF|7450|von Willebrand factor	AK301216|VWF|7450|von Willebrand factor	AK292122|VWF|7450|von Willebrand factor	M17588|VWF|7450|von Willebrand factor	X04146|VWF|7450|von Willebrand factor	AK298097|VWF|7450|von Willebrand factor	BC022258|VWF|7450|von Willebrand factor	NM_000552|VWF|7450|von Willebrand factor
hg19_v1_chr18_+_72922725_72922765	1.15082	SOX2.p2	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1
hg19_v1_chr12_-_91573264_91573358	1.14285	SOX2.p2	AK291309|DCN|1634|decorin	BX571756|DCN|1634|decorin	NM_133503|DCN|1634|decorin
hg19_v1_chr7_-_111846384_111846540	1.11327	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg19_v1_chr22_-_19512859_19512859	1.10565	SOX2.p2	AK092561|CLDN5|7122|claudin 5	NM_001130861|CLDN5|7122|claudin 5	NM_003277|CLDN5|7122|claudin 5
hg19_v1_chr8_-_6420454_6420929	1.09793	SOX2.p2	HQ258258|ANGPT2|285|angiopoietin 2	AF187858|ANGPT2|285|angiopoietin 2	AB009865|ANGPT2|285|angiopoietin 2	BC126200|ANGPT2|285|angiopoietin 2	BC126202|ANGPT2|285|angiopoietin 2	BC143902|ANGPT2|285|angiopoietin 2	AF218015|ANGPT2|285|angiopoietin 2	BC022490|ANGPT2|285|angiopoietin 2	AK075219|ANGPT2|285|angiopoietin 2	AK225698|ANGPT2|285|angiopoietin 2	AK290070|ANGPT2|285|angiopoietin 2	AK310171|ANGPT2|285|angiopoietin 2	AK312541|ANGPT2|285|angiopoietin 2	NM_001118887|ANGPT2|285|angiopoietin 2	NM_001118888|ANGPT2|285|angiopoietin 2	NM_001147|ANGPT2|285|angiopoietin 2	AJ289781|ANGPT2|285|angiopoietin 2
hg19_v1_chr6_+_12290528_12290658	1.0727	SOX2.p2	NM_001168319|EDN1|1906|endothelin 1	NM_001955|EDN1|1906|endothelin 1	S56805|EDN1|1906|endothelin 1	AK291838|EDN1|1906|endothelin 1	AK307089|EDN1|1906|endothelin 1	AK313914|EDN1|1906|endothelin 1	Y00749|EDN1|1906|endothelin 1	AK226096|EDN1|1906|endothelin 1	BC009720|EDN1|1906|endothelin 1
hg19_v1_chr4_+_41258909_41258928	1.07019	SOX2.p2	BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_-_111091947_111091947	1.0688	SOX2.p2	NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr7_+_93551015_93551098	1.06155	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg19_v1_chr4_+_41258895_41258897	1.05364	SOX2.p2	NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v1_chr5_-_39425297_39425338	1.03953	SOX2.p2	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr2_+_189839132_189839215	1.01839	SOX2.p2	X07240|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr6_+_121756744_121756906	1.00686	SOX2.p2	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa	AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa	M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa	X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa	BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa
hg19_v1_chr8_-_108510094_108510282	1.00243	SOX2.p2	U83508|ANGPT1|284|angiopoietin 1	BC152411|ANGPT1|284|angiopoietin 1	BC152419|ANGPT1|284|angiopoietin 1	D13628|ANGPT1|284|angiopoietin 1	AY055342|ANGPT1|284|angiopoietin 1	NM_001146|ANGPT1|284|angiopoietin 1	NM_001199859|ANGPT1|284|angiopoietin 1	BX648814|ANGPT1|284|angiopoietin 1
hg19_v1_chr3_+_151986731_151986754	0.998899	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg19_v1_chrX_+_100333835_100333871	0.987534	SOX2.p2	NM_021637|TMEM35|59353|transmembrane protein 35	AK024146|TMEM35|59353|transmembrane protein 35	AK223240|TMEM35|59353|transmembrane protein 35	AK297745|TMEM35|59353|transmembrane protein 35	BC050273|TMEM35|59353|transmembrane protein 35	BC078658|TMEM35|59353|transmembrane protein 35
hg19_v1_chr5_-_39425030_39425098	0.97384	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr5_-_88199868_88199921	0.932245	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr13_-_110959441_110959577	0.929368	SOX2.p2	BC142626|COL4A1|1282|collagen, type IV, alpha 1	BC151220|COL4A1|1282|collagen, type IV, alpha 1	AB209646|COL4A1|1282|collagen, type IV, alpha 1	NM_001845|COL4A1|1282|collagen, type IV, alpha 1	X05561|COL4A1|1282|collagen, type IV, alpha 1
hg19_v1_chr18_-_52969714_52969851	0.91082	SOX2.p2	FR748222|TCF4|6925|transcription factor 4	NM_001243236|TCF4|6925|transcription factor 4
hg19_v1_chr1_+_171154387_171154457	0.89938	SOX2.p2	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)
hg19_v1_chr7_-_131241321_131241405	0.895595	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg19_v1_chrX_+_100805415_100805588	0.889642	SOX2.p2	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1	NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1	CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1	AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1	BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1	AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1
hg19_v1_chr15_-_23932410_23932455	0.882787	SOX2.p2	U35139|NDN|4692|necdin homolog (mouse)	BC008750|NDN|4692|necdin homolog (mouse)	AK312779|NDN|4692|necdin homolog (mouse)	AK129654|NDN|4692|necdin homolog (mouse)	NM_002487|NDN|4692|necdin homolog (mouse)
hg19_v1_chr7_-_27205148_27205160	0.879722	SOX2.p2	NM_152739|HOXA9|3205|homeobox A9
hg19_v1_chr1_-_68697997_68698317	0.878683	SOX2.p2	BC137109|WLS|79971|wntless homolog (Drosophila)	BC137113|WLS|79971|wntless homolog (Drosophila)	BC110826|WLS|79971|wntless homolog (Drosophila)	AB097018|WLS|79971|wntless homolog (Drosophila)	AK074984|WLS|79971|wntless homolog (Drosophila)	AK301613|WLS|79971|wntless homolog (Drosophila)	BX648748|WLS|79971|wntless homolog (Drosophila)	BX538320|WLS|79971|wntless homolog (Drosophila)	NM_001002292|WLS|79971|wntless homolog (Drosophila)	NM_001193334|WLS|79971|wntless homolog (Drosophila)	AK074583|WLS|79971|wntless homolog (Drosophila)	AK309779|WLS|79971|wntless homolog (Drosophila)	DQ323735|WLS|79971|wntless homolog (Drosophila)	AY359035|WLS|79971|wntless homolog (Drosophila)	NM_024911|WLS|79971|wntless homolog (Drosophila)
hg19_v1_chr2_-_190044330_190044604	0.861715	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	M31365|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg19_v1_chr1_+_183605207_183605477	0.857699	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr16_+_66400524_66400542	0.851568	SOX2.p2	NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)
hg19_v1_chr1_+_81771844_81772011	0.837996	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg19_v1_chr18_-_53257033_53257044	0.834728	SOX2.p2	AK315074|TCF4|6925|transcription factor 4	AK299169|TCF4|6925|transcription factor 4	NM_001243227|TCF4|6925|transcription factor 4	NM_001243228|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_34687663_34687663	0.831091	SOX2.p2	AY354204|RAI14|26064|retinoic acid induced 14	NM_001145523|RAI14|26064|retinoic acid induced 14
hg19_v1_chr10_+_17270469_17270604	0.828177	SOX2.p2	BC066956|VIM|7431|vimentin
hg19_v1_chr10_+_17271302_17271316	0.822522	SOX2.p2	Z19554|VIM|7431|vimentin
hg19_v1_chr1_+_66797775_66797932	0.817866	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr10_+_17271276_17271276	0.816289	SOX2.p2	AK056766|VIM|7431|vimentin	AK091813|VIM|7431|vimentin	AK097336|VIM|7431|vimentin	AK098444|VIM|7431|vimentin	AK222507|VIM|7431|vimentin	AK222602|VIM|7431|vimentin
hg19_v1_chr10_+_17271277_17271297	0.815796	SOX2.p2	X16478|VIM|7431|vimentin	AK222482|VIM|7431|vimentin	AF328728|VIM|7431|vimentin	BC000163|VIM|7431|vimentin	BC030573|VIM|7431|vimentin
hg19_v1_chr6_-_32163890_32163924	0.815411	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg19_v1_chr18_-_53089722_53089722	0.814118	SOX2.p2	AK300612|TCF4|6925|transcription factor 4	NM_001243233|TCF4|6925|transcription factor 4
hg19_v1_chr9_+_36036900_36036994	0.807877	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v1_chrX_+_12994286_12994400	0.785845	SOX2.p2	BC104464|TMSB4X|7114|thymosin beta 4, X-linked	BC104465|TMSB4X|7114|thymosin beta 4, X-linked	BT007090|TMSB4X|7114|thymosin beta 4, X-linked	X02493|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chrX_+_80457302_80457504	0.785286	SOX2.p2	NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr6_-_139695739_139695783	0.777895	SOX2.p2	BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chrX_+_15525430_15525430	0.768378	SOX2.p2	NM_001721|BMX|660|BMX non-receptor tyrosine kinase
hg19_v1_chr9_-_16727887_16727908	0.765719	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg19_v1_chrX_+_135251454_135251454	0.755337	SOX2.p2	AK122708|FHL1|2273|four and a half LIM domains 1	NM_001159704|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr4_+_146403955_146403962	0.75333	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg19_v1_chrX_+_135251795_135251795	0.749181	SOX2.p2	NM_001167819|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr1_+_100111430_100111704	0.745021	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin
hg19_v1_chr1_+_151032866_151032873	0.740553	SOX2.p2	BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr1_+_151032880_151032893	0.73292	SOX2.p2	AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chrX_+_12993224_12993256	0.730133	SOX2.p2	BC107789|TMSB4X|7114|thymosin beta 4, X-linked	NM_021109|TMSB4X|7114|thymosin beta 4, X-linked	M17733|TMSB4X|7114|thymosin beta 4, X-linked	AK055976|TMSB4X|7114|thymosin beta 4, X-linked	AK057827|TMSB4X|7114|thymosin beta 4, X-linked	AK311747|TMSB4X|7114|thymosin beta 4, X-linked	BC016732|TMSB4X|7114|thymosin beta 4, X-linked	BC022857|TMSB4X|7114|thymosin beta 4, X-linked	BC062436|TMSB4X|7114|thymosin beta 4, X-linked	BC070248|TMSB4X|7114|thymosin beta 4, X-linked	BC070249|TMSB4X|7114|thymosin beta 4, X-linked	BC083509|TMSB4X|7114|thymosin beta 4, X-linked	BC092437|TMSB4X|7114|thymosin beta 4, X-linked	BC104666|TMSB4X|7114|thymosin beta 4, X-linked	BC061586|TMSB4X|7114|thymosin beta 4, X-linked	BC151215|TMSB4X|7114|thymosin beta 4, X-linked	BC139925|TMSB4X|7114|thymosin beta 4, X-linked	BC101790|TMSB4X|7114|thymosin beta 4, X-linked	BC101792|TMSB4X|7114|thymosin beta 4, X-linked	BC001631|TMSB4X|7114|thymosin beta 4, X-linked	BC064954|TMSB4X|7114|thymosin beta 4, X-linked	BC128103|TMSB4X|7114|thymosin beta 4, X-linked	BC141975|TMSB4X|7114|thymosin beta 4, X-linked	BC141976|TMSB4X|7114|thymosin beta 4, X-linked	BC128102|TMSB4X|7114|thymosin beta 4, X-linked
hg19_v1_chr15_-_83876769_83876824	0.728889	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr11_+_5710926_5711111	0.72676	SOX2.p2	AK308221|TRIM22|10346|tripartite motif containing 22	AK310098|TRIM22|10346|tripartite motif containing 22	BC022281|TRIM22|10346|tripartite motif containing 22	AK298715|TRIM22|10346|tripartite motif containing 22	BC035582|TRIM22|10346|tripartite motif containing 22	AK290434|TRIM22|10346|tripartite motif containing 22	X82200|TRIM22|10346|tripartite motif containing 22	AK308796|TRIM22|10346|tripartite motif containing 22	AK301192|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr6_+_153019029_153019181	0.722108	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg19_v1_chr6_-_112575880_112575911	0.715843	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg19_v1_chrX_+_80457597_80457699	0.709375	SOX2.p2	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr3_-_168864325_168864399	0.705986	SOX2.p2	AK292865|MECOM|2122|MDS1 and EVI1 complex locus	AF487422|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr1_-_26233367_26233367	0.703334	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg19_v1_chrX_+_80457559_80457593	0.697411	SOX2.p2	AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like
hg19_v1_chr1_+_66458389_66458417	0.695391	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr11_+_46402333_46402617	0.694798	SOX2.p2	AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)	AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)	AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)	NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)
hg19_v1_chr7_-_107643330_107643880	0.690314	SOX2.p2	BC113455|LAMB1|3912|laminin, beta 1	M61916|LAMB1|3912|laminin, beta 1	BX648251|LAMB1|3912|laminin, beta 1	AK303501|LAMB1|3912|laminin, beta 1	AK309921|LAMB1|3912|laminin, beta 1	AK307611|LAMB1|3912|laminin, beta 1	BC044633|LAMB1|3912|laminin, beta 1	BC052598|LAMB1|3912|laminin, beta 1	NM_002291|LAMB1|3912|laminin, beta 1
hg19_v1_chr5_+_95066628_95067109	0.686366	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg19_v1_chr9_+_101705710_101706256	0.685466	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg19_v1_chr12_+_49212253_49212314	0.68305	SOX2.p2	NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit
hg19_v1_chr1_+_151032683_151032861	0.679241	SOX2.p2	U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
hg19_v1_chr2_-_151344145_151344183	0.67552	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg19_v1_chr8_-_93029864_93029907	0.673897	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr1_+_155853546_155853601	0.668751	SOX2.p2	AK026178|SYT11|23208|synaptotagmin XI
hg19_v1_chr2_-_217540722_217540847	0.666934	SOX2.p2	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5	AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5
hg19_v1_chr15_+_67358194_67358609	0.664849	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg19_v1_chrX_-_11284094_11284123	0.649754	SOX2.p2	AF177663|ARHGAP6|395|Rho GTPase activating protein 6	NM_013423|ARHGAP6|395|Rho GTPase activating protein 6	AK297713|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr1_+_163038564_163038763	0.646149	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr1_-_85930610_85930640	0.644215	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chr6_-_27440459_27440944	0.641943	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg19_v1_chr12_-_91576579_91576582	0.641871	SOX2.p2	AL355731|DCN|1634|decorin
hg19_v1_chr9_+_116342939_116342939	0.62159	SOX2.p2	AF006609|RGS3|5998|regulator of G-protein signaling 3	NM_021106|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr9_+_116343169_116343207	0.610982	SOX2.p2	U27655|RGS3|5998|regulator of G-protein signaling 3	AK125094|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr12_+_14538232_14538312	0.610151	SOX2.p2	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein	BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein
hg19_v1_chr1_+_163038934_163039274	0.609798	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg19_v1_chr6_-_139695784_139695784	0.606817	SOX2.p2	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chr3_-_120169493_120170182	0.606109	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg19_v1_chr14_+_105941061_105941199	0.604569	SOX2.p2	BC034151|CRIP2|1397|cysteine-rich protein 2	NM_001312|CRIP2|1397|cysteine-rich protein 2	AK315757|CRIP2|1397|cysteine-rich protein 2	U36190|CRIP2|1397|cysteine-rich protein 2	BC034386|CRIP2|1397|cysteine-rich protein 2	BC128101|CRIP2|1397|cysteine-rich protein 2	D42123|CRIP2|1397|cysteine-rich protein 2	BC000434|CRIP2|1397|cysteine-rich protein 2	BC001931|CRIP2|1397|cysteine-rich protein 2	DQ891382|CRIP2|1397|cysteine-rich protein 2	DQ894559|CRIP2|1397|cysteine-rich protein 2	AK223251|CRIP2|1397|cysteine-rich protein 2	BT019911|CRIP2|1397|cysteine-rich protein 2
hg19_v1_chr9_+_116263706_116263856	0.604131	SOX2.p2	AF463495|RGS3|5998|regulator of G-protein signaling 3	NM_130795|RGS3|5998|regulator of G-protein signaling 3	AK096840|RGS3|5998|regulator of G-protein signaling 3	BC042555|RGS3|5998|regulator of G-protein signaling 3	AF490840|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr18_-_53255361_53255479	0.599425	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg19_v1_chr5_+_102465256_102465293	0.593664	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg19_v1_chr14_-_92414004_92414045	0.590926	SOX2.p2	AY358898|FBLN5|10516|fibulin 5	NM_006329|FBLN5|10516|fibulin 5
hg19_v1_chr1_-_226926875_226927002	0.589338	SOX2.p2	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B
hg19_v1_chr8_-_82395401_82395475	0.588258	SOX2.p2	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte	CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte	J02874|FABP4|2167|fatty acid binding protein 4, adipocyte	BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte	NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte
hg19_v1_chrX_+_135229536_135229731	0.587168	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg19_v1_chr8_-_119964059_119964382	0.586912	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg19_v1_chr15_+_96869156_96869166	0.58683	SOX2.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr1_-_47695442_47695442	0.580385	SOX2.p2	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1	NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1
hg19_v1_chr5_+_71502700_71502827	0.578845	SOX2.p2	AK125194|MAP1B|4131|microtubule-associated protein 1B
hg19_v1_chr4_+_90816002_90816122	0.566726	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1	HQ258009|MMRN1|22915|multimerin 1
hg19_v1_chr1_-_95392501_95392780	0.55894	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg19_v1_chr1_+_43766565_43766742	0.547338	SOX2.p2	NM_001253357|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1	EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1
hg19_v1_chr4_+_86851425_86851425	0.541107	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr5_-_111092918_111092954	0.540262	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr1_+_196621007_196621247	0.53512	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg19_v1_chr14_-_92413738_92413810	0.53278	SOX2.p2	AF112152|FBLN5|10516|fibulin 5	AF093118|FBLN5|10516|fibulin 5	BX248290|FBLN5|10516|fibulin 5	BC022280|FBLN5|10516|fibulin 5	AK075147|FBLN5|10516|fibulin 5
hg19_v1_chr8_+_79428335_79428335	0.532599	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v1_chr7_+_134464417_134464428	0.528646	SOX2.p2	BC040354|CALD1|800|caldesmon 1
hg19_v1_chr8_-_93115453_93115457	0.528488	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr8_-_93107442_93107489	0.525486	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr10_-_88717319_88717424	0.525334	SOX2.p2	BC072456|MMRN2|79812|multimerin 2	AK304727|MMRN2|79812|multimerin 2	AK023527|MMRN2|79812|multimerin 2	AK293822|MMRN2|79812|multimerin 2	BC094744|MMRN2|79812|multimerin 2	BC064415|MMRN2|79812|multimerin 2	AK308401|MMRN2|79812|multimerin 2	NM_024756|MMRN2|79812|multimerin 2
hg19_v1_chr14_+_77228132_77228779	0.523929	SOX2.p2	NM_014909|VASH1|22846|vasohibin 1	AL832588|VASH1|22846|vasohibin 1	BC009031|VASH1|22846|vasohibin 1	AB028959|VASH1|22846|vasohibin 1
hg19_v1_chr13_-_24007822_24007859	0.522011	SOX2.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v1_chr10_+_45496272_45496382	0.520658	SOX2.p2	NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)	AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)	BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)
hg19_v1_chr19_-_11305186_11305265	0.514786	SOX2.p2	AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2	NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2
hg19_v1_chr1_-_110283659_110283659	0.513033	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg19_v1_chr11_-_6676851_6677075	0.512189	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg19_v1_chr13_+_111137249_111137279	0.510619	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg19_v1_chr12_+_112204690_112204694	0.509648	SOX2.p2	NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr2_-_175869910_175870116	0.505753	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1
hg19_v1_chr12_-_10251520_10251663	0.50574	SOX2.p2	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg19_v1_chr5_-_150521200_150521215	0.494173	SOX2.p2	AK303078|ANXA6|309|annexin A6	NM_001193544|ANXA6|309|annexin A6
hg19_v1_chr3_-_69037498_69037515	0.490713	SOX2.p2	AK123213|C3orf64|285203|chromosome 3 open reading frame 64
hg19_v1_chr21_+_35190586_35190755	0.490594	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr8_-_17579729_17579729	0.48927	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr3_+_173116243_173116243	0.488593	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg19_v1_chr18_-_53255734_53255861	0.488418	SOX2.p2	FR748216|TCF4|6925|transcription factor 4	AK122765|TCF4|6925|transcription factor 4	NM_001083962|TCF4|6925|transcription factor 4	NM_001243230|TCF4|6925|transcription factor 4	NM_003199|TCF4|6925|transcription factor 4
hg19_v1_chr13_-_99630243_99630337	0.4878	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg19_v1_chr6_-_167040700_167040736	0.479515	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr9_+_103235489_103235519	0.478991	SOX2.p2	NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr6_-_139695349_139695498	0.475953	SOX2.p2	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v1_chrX_+_86772714_86772896	0.475585	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg19_v1_chr3_-_114790221_114790260	0.473432	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr15_-_23932364_23932396	0.473246	SOX2.p2	
hg19_v1_chr17_-_33759518_33759542	0.470806	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg19_v1_chr5_-_176900653_176900693	0.468605	SOX2.p2	NM_004395|DBN1|1627|drebrin 1
hg19_v1_chr12_+_93963597_93963597	0.466911	SOX2.p2	NM_003877|SOCS2|8835|suppressor of cytokine signaling 2
hg19_v1_chr2_-_218843541_218843551	0.461614	SOX2.p2	AK001785|TNS1|7145|tensin 1
hg19_v1_chr9_+_103204187_103204220	0.460787	SOX2.p2	NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough	AY598327|C9orf30|91283|chromosome 9 open reading frame 30
hg19_v1_chr2_+_74120132_74120143	0.460329	SOX2.p2	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric	AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric	BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric	X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr5_-_111092865_111092908	0.460263	SOX2.p2	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr9_-_14313899_14313907	0.456706	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg19_v1_chr16_-_4896197_4896210	0.451348	SOX2.p2	BC003693|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v1_chr6_-_46293404_46293410	0.450659	SOX2.p2	D83407|RCAN2|10231|regulator of calcineurin 2	BC038509|RCAN2|10231|regulator of calcineurin 2
hg19_v1_chr7_-_27205123_27205130	0.450584	SOX2.p2	BC006537|HOXA9|3205|homeobox A9	BC010023|HOXA9|3205|homeobox A9
hg19_v1_chr9_-_14398981_14398981	0.449752	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg19_v1_chr1_-_86043932_86044049	0.449186	SOX2.p2	BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg19_v1_chrX_+_99899162_99899303	0.448755	SOX2.p2	NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2	AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chrX_+_99899388_99899402	0.448171	SOX2.p2	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2
hg19_v1_chr16_+_58534045_58534152	0.446676	SOX2.p2	AK055038|NDRG4|65009|NDRG family member 4	AB044944|NDRG4|65009|NDRG family member 4	AB044945|NDRG4|65009|NDRG family member 4	AK131248|NDRG4|65009|NDRG family member 4	AK296415|NDRG4|65009|NDRG family member 4	AK299949|NDRG4|65009|NDRG family member 4	AK316089|NDRG4|65009|NDRG family member 4	NM_001242833|NDRG4|65009|NDRG family member 4	NM_001242834|NDRG4|65009|NDRG family member 4	NM_001242835|NDRG4|65009|NDRG family member 4	NM_001242836|NDRG4|65009|NDRG family member 4	BC011795|NDRG4|65009|NDRG family member 4	AB033006|NDRG4|65009|NDRG family member 4	AL136584|NDRG4|65009|NDRG family member 4	BC001527|NDRG4|65009|NDRG family member 4	AM393094|NDRG4|65009|NDRG family member 4	AM393323|NDRG4|65009|NDRG family member 4
hg19_v1_chr9_+_4490193_4490681	0.446542	SOX2.p2	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v1_chr5_-_176900591_176900650	0.446297	SOX2.p2	U00802|DBN1|1627|drebrin 1	D17530|DBN1|1627|drebrin 1	BC000283|DBN1|1627|drebrin 1	BC007281|DBN1|1627|drebrin 1	BC007567|DBN1|1627|drebrin 1	AK094125|DBN1|1627|drebrin 1	AK225523|DBN1|1627|drebrin 1	AK314645|DBN1|1627|drebrin 1
hg19_v1_chr5_-_39394423_39394520	0.446001	SOX2.p2	DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg19_v1_chr21_+_37507209_37507490	0.445657	SOX2.p2	AB041012|CBR3|874|carbonyl reductase 3	NM_001236|CBR3|874|carbonyl reductase 3	AB124847|CBR3|874|carbonyl reductase 3	AK223429|CBR3|874|carbonyl reductase 3	BC002812|CBR3|874|carbonyl reductase 3	AB004854|CBR3|874|carbonyl reductase 3	CR541709|CBR3|874|carbonyl reductase 3
hg19_v1_chr1_-_159895258_159895272	0.444262	SOX2.p2	BC009357|TAGLN2|8407|transgelin 2
hg19_v1_chr15_-_90347534_90347606	0.434467	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg19_v1_chr8_+_70405027_70405051	0.432901	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg19_v1_chr2_-_70475563_70475875	0.432553	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v1_chrX_+_51927918_51928036	0.429666	SOX2.p2	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	BC063838|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr18_+_32073343_32073384	0.42638	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr2_+_74120092_74120111	0.425414	SOX2.p2	NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric	NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric
hg19_v1_chr4_-_186732047_186732047	0.425171	SOX2.p2	AK293400|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145672|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr2_+_110656008_110656008	0.424727	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr1_-_201476218_201476240	0.422438	SOX2.p2	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr8_+_70405080_70405098	0.420019	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg19_v1_chr2_+_189157551_189157612	0.419602	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg19_v1_chr7_+_22767101_22767136	0.417486	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr7_-_11871735_11871844	0.416224	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg19_v1_chrX_-_100872926_100872990	0.415568	SOX2.p2	BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6	NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6
hg19_v1_chr8_-_93075190_93075190	0.410824	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr2_-_111230651_111230651	0.410808	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough	NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr7_+_22766765_22766881	0.408986	SOX2.p2	AK298077|IL6|3569|interleukin 6 (interferon, beta 2)	AK301141|IL6|3569|interleukin 6 (interferon, beta 2)	NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)	X04430|IL6|3569|interleukin 6 (interferon, beta 2)	AK298013|IL6|3569|interleukin 6 (interferon, beta 2)	M14584|IL6|3569|interleukin 6 (interferon, beta 2)	M18403|IL6|3569|interleukin 6 (interferon, beta 2)	BC015511|IL6|3569|interleukin 6 (interferon, beta 2)	M54894|IL6|3569|interleukin 6 (interferon, beta 2)	M29150|IL6|3569|interleukin 6 (interferon, beta 2)	X04602|IL6|3569|interleukin 6 (interferon, beta 2)	S56892|IL6|3569|interleukin 6 (interferon, beta 2)	BT019748|IL6|3569|interleukin 6 (interferon, beta 2)	BT019749|IL6|3569|interleukin 6 (interferon, beta 2)	CR450296|IL6|3569|interleukin 6 (interferon, beta 2)	DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)	DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)
hg19_v1_chr12_+_112204711_112204786	0.407797	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v1_chr16_+_58497628_58497648	0.407166	SOX2.p2	AB021172|NDRG4|65009|NDRG family member 4
hg19_v1_chr15_-_83876165_83876664	0.407012	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg19_v1_chr16_+_58497548_58497612	0.406229	SOX2.p2	NM_020465|NDRG4|65009|NDRG family member 4
hg19_v1_chr3_+_113616317_113616402	0.404784	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg19_v1_chr3_-_15373807_15374076	0.400853	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg19_v1_chr9_-_14086901_14087003	0.398881	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg19_v1_chr10_+_105005643_105005704	0.398365	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg19_v1_chr14_+_100259445_100259963	0.395698	SOX2.p2	AK126980|EML1|2009|echinoderm microtubule associated protein like 1	BX247979|EML1|2009|echinoderm microtubule associated protein like 1	NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1	NM_004434|EML1|2009|echinoderm microtubule associated protein like 1	BC033043|EML1|2009|echinoderm microtubule associated protein like 1	U97018|EML1|2009|echinoderm microtubule associated protein like 1	BC032541|EML1|2009|echinoderm microtubule associated protein like 1	DQ891556|EML1|2009|echinoderm microtubule associated protein like 1	DQ894743|EML1|2009|echinoderm microtubule associated protein like 1
hg19_v1_chr18_+_32556891_32557027	0.394725	SOX2.p2	NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2
hg19_v1_chrX_+_149613719_149613846	0.394107	SOX2.p2	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1	NM_005491|MAMLD1|10046|mastermind-like domain containing 1	U46023|MAMLD1|10046|mastermind-like domain containing 1	BC136324|MAMLD1|10046|mastermind-like domain containing 1	AK315217|MAMLD1|10046|mastermind-like domain containing 1
hg19_v1_chrX_-_51812249_51812367	0.393231	SOX2.p2	BC063838|MAGED4B|81557|melanoma antigen family D, 4B	BC081566|MAGED4B|81557|melanoma antigen family D, 4B	AL136582|MAGED4B|81557|melanoma antigen family D, 4B	AB040527|MAGED4B|81557|melanoma antigen family D, 4B	AB040528|MAGED4B|81557|melanoma antigen family D, 4B	AB040529|MAGED4B|81557|melanoma antigen family D, 4B	NM_001098800|MAGED4|728239|melanoma antigen family D, 4	AK098830|MAGED4B|81557|melanoma antigen family D, 4B	AK289458|MAGED4B|81557|melanoma antigen family D, 4B	AK308365|MAGED4B|81557|melanoma antigen family D, 4B	BC001207|MAGED4B|81557|melanoma antigen family D, 4B	AB058762|MAGED4B|81557|melanoma antigen family D, 4B	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B	NM_030801|MAGED4B|81557|melanoma antigen family D, 4B	NM_177535|MAGED4B|81557|melanoma antigen family D, 4B	NM_177537|MAGED4B|81557|melanoma antigen family D, 4B
hg19_v1_chr4_+_55523906_55524362	0.391762	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v1_chr7_-_137028275_137028331	0.391419	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg19_v1_chr5_+_140739589_140739702	0.389632	SOX2.p2	BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2	AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2	NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2
hg19_v1_chr2_-_192711651_192711826	0.38942	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg19_v1_chr7_+_143058794_143058809	0.389021	SOX2.p2	AK316227|ZYX|7791|zyxin
hg19_v1_chr2_+_109271267_109271267	0.387882	SOX2.p2	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr4_-_186732208_186732224	0.385955	SOX2.p2	BC011883|SORBS2|8470|sorbin and SH3 domain containing 2	NM_001145671|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr19_-_36247917_36247945	0.385546	SOX2.p2	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg19_v1_chr4_+_146402704_146403061	0.385503	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg19_v1_chr10_-_735522_735861	0.384392	SOX2.p2	AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v1_chr11_-_72380107_72380107	0.383156	SOX2.p2	AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr18_-_53303129_53303187	0.382999	SOX2.p2	BC031056|TCF4|6925|transcription factor 4	NM_001243226|TCF4|6925|transcription factor 4
hg19_v1_chr1_-_159895279_159895296	0.381467	SOX2.p2	BC002616|TAGLN2|8407|transgelin 2	D21261|TAGLN2|8407|transgelin 2	GU727636|TAGLN2|8407|transgelin 2	NM_003564|TAGLN2|8407|transgelin 2	AK291562|TAGLN2|8407|transgelin 2	AK298654|TAGLN2|8407|transgelin 2
hg19_v1_chr12_-_49582800_49582865	0.380366	SOX2.p2	BC006468|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr21_+_30517897_30517923	0.377519	SOX2.p2	AK309998|C21orf7|56911|chromosome 21 open reading frame 7	EF219160|C21orf7|56911|chromosome 21 open reading frame 7
hg19_v1_chr3_-_58563070_58563149	0.377513	SOX2.p2	AB023811|FAM107A|11170|family with sequence similarity 107, member A	BC010561|FAM107A|11170|family with sequence similarity 107, member A	AL050264|FAM107A|11170|family with sequence similarity 107, member A	AK055443|FAM107A|11170|family with sequence similarity 107, member A	AK128791|FAM107A|11170|family with sequence similarity 107, member A	BC093012|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr21_-_39870303_39870427	0.374178	SOX2.p2	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)
hg19_v1_chr3_+_159557745_159557973	0.3733	SOX2.p2	BC005947|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr7_-_137028433_137028449	0.371164	SOX2.p2	X52946|PTN|5764|pleiotrophin	AK313424|PTN|5764|pleiotrophin
hg19_v1_chr3_-_99833348_99833356	0.370109	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like	AX776292|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chr7_-_83824216_83824429	0.369991	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v1_chr1_-_243418675_243418707	0.367942	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg19_v1_chr9_-_88715024_88715145	0.366707	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg19_v1_chr6_+_119215240_119215577	0.366301	SOX2.p2	NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)
hg19_v1_chr1_-_95392449_95392498	0.362976	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg19_v1_chr9_+_91003987_91004010	0.361877	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg19_v1_chr1_-_17308072_17308080	0.359856	SOX2.p2	AK301655|MFAP2|4237|microfibrillar-associated protein 2	NM_001135247|MFAP2|4237|microfibrillar-associated protein 2	NM_017459|MFAP2|4237|microfibrillar-associated protein 2
hg19_v1_chr2_-_192711923_192712020	0.357896	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg19_v1_chr11_-_27681195_27681195	0.355227	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr5_-_95158465_95158576	0.353602	SOX2.p2	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)	NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)	NM_002064|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr9_-_14313509_14313718	0.352995	SOX2.p2	BT007266|NFIB|4781|nuclear factor I/B	DQ891097|NFIB|4781|nuclear factor I/B	DQ894279|NFIB|4781|nuclear factor I/B	EU832141|NFIB|4781|nuclear factor I/B	EU832234|NFIB|4781|nuclear factor I/B	AK290603|NFIB|4781|nuclear factor I/B	BC001283|NFIB|4781|nuclear factor I/B	U85193|NFIB|4781|nuclear factor I/B
hg19_v1_chr15_-_37393364_37393521	0.352582	SOX2.p2	BC050431|MEIS2|4212|Meis homeobox 2	NM_001220482|MEIS2|4212|Meis homeobox 2	NM_002399|MEIS2|4212|Meis homeobox 2	BC001516|MEIS2|4212|Meis homeobox 2	BC001844|MEIS2|4212|Meis homeobox 2	BC007202|MEIS2|4212|Meis homeobox 2	AK300247|MEIS2|4212|Meis homeobox 2
hg19_v1_chr2_+_36583369_36583435	0.352381	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v1_chr5_+_95067511_95067562	0.351507	SOX2.p2	
hg19_v1_chrX_-_10645726_10645787	0.350377	SOX2.p2	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)	AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chrX_-_134185978_134186280	0.350223	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg19_v1_chr2_-_56151273_56151297	0.349056	SOX2.p2	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1	NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg19_v1_chr7_-_137028370_137028376	0.347626	SOX2.p2	AK290488|PTN|5764|pleiotrophin
hg19_v1_chr3_+_159557649_159557738	0.347317	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg19_v1_chr18_-_25757351_25757444	0.347299	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr11_+_65339819_65340044	0.345967	SOX2.p2	BC032373|FAM89B|23625|family with sequence similarity 89, member B	NM_001098784|FAM89B|23625|family with sequence similarity 89, member B	NM_001098785|FAM89B|23625|family with sequence similarity 89, member B	NM_152832|FAM89B|23625|family with sequence similarity 89, member B	AF052151|FAM89B|23625|family with sequence similarity 89, member B
hg19_v1_chr1_-_23886284_23886284	0.345963	SOX2.p2	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr9_+_103235634_103235825	0.343528	SOX2.p2	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v1_chr11_-_117166247_117166385	0.342897	SOX2.p2	AB177847|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296015|BACE1|23621|beta-site APP-cleaving enzyme 1	AK296535|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207048|BACE1|23621|beta-site APP-cleaving enzyme 1	NM_001207049|BACE1|23621|beta-site APP-cleaving enzyme 1
hg19_v1_chr12_-_71003622_71003623	0.341684	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg19_v1_chr11_-_89224413_89224732	0.339764	SOX2.p2	AF261943|NOX4|50507|NADPH oxidase 4	AJ704725|NOX4|50507|NADPH oxidase 4	AJ704726|NOX4|50507|NADPH oxidase 4	AJ704727|NOX4|50507|NADPH oxidase 4	AJ704728|NOX4|50507|NADPH oxidase 4	AJ704729|NOX4|50507|NADPH oxidase 4	AY288918|NOX4|50507|NADPH oxidase 4	AK311389|NOX4|50507|NADPH oxidase 4	BC040105|NOX4|50507|NADPH oxidase 4	AK291830|NOX4|50507|NADPH oxidase 4	AK298376|NOX4|50507|NADPH oxidase 4	AF254621|NOX4|50507|NADPH oxidase 4	AB041035|NOX4|50507|NADPH oxidase 4	NM_001143836|NOX4|50507|NADPH oxidase 4	NM_016931|NOX4|50507|NADPH oxidase 4	BC051371|NOX4|50507|NADPH oxidase 4
hg19_v1_chr22_+_38092994_38093010	0.339098	SOX2.p2	NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein	AK096634|TRIOBP|11078|TRIO and F-actin binding protein
hg19_v1_chr11_-_10830034_10830078	0.338907	SOX2.p2	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr11_+_111807857_111807960	0.338843	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg19_v1_chrX_-_138287180_138287215	0.337528	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr9_+_27109138_27109146	0.333955	SOX2.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg19_v1_chr17_-_48262900_48262939	0.333756	SOX2.p2	J00113|COL1A1|1277|collagen, type I, alpha 1	M32798|COL1A1|1277|collagen, type I, alpha 1
hg19_v1_chr5_-_168271852_168271866	0.332959	SOX2.p2	
hg19_v1_chr3_+_154797644_154797704	0.331483	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg19_v1_chr7_-_137028533_137028577	0.331295	SOX2.p2	BC005916|PTN|5764|pleiotrophin	NM_002825|PTN|5764|pleiotrophin	M57399|PTN|5764|pleiotrophin
hg19_v1_chr8_-_38326115_38326188	0.330561	SOX2.p2	BC018128|FGFR1|2260|fibroblast growth factor receptor 1	M60485|FGFR1|2260|fibroblast growth factor receptor 1	X66945|FGFR1|2260|fibroblast growth factor receptor 1	AB208919|FGFR1|2260|fibroblast growth factor receptor 1	BC015035|FGFR1|2260|fibroblast growth factor receptor 1	AK222718|FGFR1|2260|fibroblast growth factor receptor 1	AK223126|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr3_+_69812620_69812706	0.326396	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr5_+_34656482_34656543	0.325546	SOX2.p2	BC052988|RAI14|26064|retinoic acid induced 14	AF155135|RAI14|26064|retinoic acid induced 14	AK314379|RAI14|26064|retinoic acid induced 14
hg19_v1_chr14_+_85996454_85996493	0.323388	SOX2.p2	AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr8_-_93111915_93111915	0.321604	SOX2.p2	NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr20_+_11898536_11898579	0.32121	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg19_v1_chr3_+_154797435_154797463	0.321156	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg19_v1_chr6_-_75965845_75965927	0.320755	SOX2.p2	AJ420517|TMEM30A|55754|transmembrane protein 30A
hg19_v1_chr2_+_189839113_189839123	0.318514	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr18_+_56530677_56531034	0.315885	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg19_v1_chr8_+_17433941_17433941	0.315209	SOX2.p2	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like	NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like
hg19_v1_chr7_+_16793320_16793592	0.315044	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg19_v1_chrX_-_100914816_100914862	0.31405	SOX2.p2	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2	AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2	BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2	BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2	AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2	NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2
hg19_v1_chr8_-_93107881_93107881	0.312433	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr2_+_109271484_109271492	0.312411	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg19_v1_chr5_-_95158365_95158435	0.310522	SOX2.p2	AF162769|GLRX|2745|glutaredoxin (thioltransferase)	BT006689|GLRX|2745|glutaredoxin (thioltransferase)	CR450312|GLRX|2745|glutaredoxin (thioltransferase)	CR542165|GLRX|2745|glutaredoxin (thioltransferase)	DQ892497|GLRX|2745|glutaredoxin (thioltransferase)	DQ895709|GLRX|2745|glutaredoxin (thioltransferase)	D21238|GLRX|2745|glutaredoxin (thioltransferase)	AF069668|GLRX|2745|glutaredoxin (thioltransferase)	BC106075|GLRX|2745|glutaredoxin (thioltransferase)	X76648|GLRX|2745|glutaredoxin (thioltransferase)	AK311868|GLRX|2745|glutaredoxin (thioltransferase)	BC005304|GLRX|2745|glutaredoxin (thioltransferase)	BC010965|GLRX|2745|glutaredoxin (thioltransferase)
hg19_v1_chr1_-_79472360_79472494	0.308771	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v1_chr2_+_198669316_198669425	0.306573	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg19_v1_chr17_+_74864427_74864905	0.30637	SOX2.p2	AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B	BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
hg19_v1_chr3_+_69985750_69985873	0.304547	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr11_+_46299554_46299567	0.303088	SOX2.p2	BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1
hg19_v1_chr2_-_158731622_158731622	0.302667	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg19_v1_chr11_-_78052925_78052925	0.300601	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg19_v1_chr17_-_3571819_3571878	0.300507	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr2_-_128421965_128422166	0.298666	SOX2.p2	AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2	AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2	NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr2_-_188419185_188419218	0.297428	SOX2.p2	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v1_chr7_-_47621635_47621692	0.296721	SOX2.p2	CR749644|TNS3|64759|tensin 3
hg19_v1_chr2_+_189839078_189839111	0.295587	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg19_v1_chr3_+_138066489_138066538	0.294459	SOX2.p2	NM_001252091|MRAS|22808|muscle RAS oncogene homolog	NM_012219|MRAS|22808|muscle RAS oncogene homolog	AK124954|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr1_+_84630575_84630648	0.292868	SOX2.p2	AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr7_-_47621741_47621825	0.290459	SOX2.p2	AK092864|TNS3|64759|tensin 3	NM_022748|TNS3|64759|tensin 3
hg19_v1_chrX_+_11777734_11777760	0.290091	SOX2.p2	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)
hg19_v1_chr3_-_99594915_99595067	0.289636	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg19_v1_chrX_-_38079980_38080271	0.289041	SOX2.p2	U61374|SRPX|8406|sushi-repeat containing protein, X-linked	U78093|SRPX|8406|sushi-repeat containing protein, X-linked	AK298802|SRPX|8406|sushi-repeat containing protein, X-linked	AK289430|SRPX|8406|sushi-repeat containing protein, X-linked	BC020684|SRPX|8406|sushi-repeat containing protein, X-linked	AK293127|SRPX|8406|sushi-repeat containing protein, X-linked	AK125542|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked	NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked	NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked
hg19_v1_chr7_-_27213873_27213954	0.287666	SOX2.p2	DQ891906|HOXA10|3206|homeobox A10	DQ895092|HOXA10|3206|homeobox A10	DQ896836|HOXA10|3206|homeobox A10	BC007600|HOXA10|3206|homeobox A10	BC013971|HOXA10|3206|homeobox A10	NM_018951|HOXA10|3206|homeobox A10
hg19_v1_chr18_+_66465316_66465369	0.287652	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg19_v1_chr17_-_46682333_46682356	0.287011	SOX2.p2	BC014651|HOXB6|3216|homeobox B6	NM_018952|HOXB6|3216|homeobox B6	AK292200|HOXB6|3216|homeobox B6
hg19_v1_chr9_+_116356199_116356222	0.286794	SOX2.p2	AF490838|RGS3|5998|regulator of G-protein signaling 3	NM_144489|RGS3|5998|regulator of G-protein signaling 3	AK054584|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr8_+_40010986_40011051	0.285461	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4
hg19_v1_chrY_+_15016018_15016018	0.285111	SOX2.p2	BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
hg19_v1_chr17_-_46671322_46671412	0.284693	SOX2.p2	M92299|HOXB5|3215|homeobox B5
hg19_v1_chr11_-_10830581_10830672	0.284527	SOX2.p2	NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr7_+_94024201_94024342	0.283552	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg19_v1_chr5_+_35856990_35857077	0.282509	SOX2.p2	BC020717|IL7R|3575|interleukin 7 receptor	FJ529208|IL7R|3575|interleukin 7 receptor	NM_002185|IL7R|3575|interleukin 7 receptor	AK301220|IL7R|3575|interleukin 7 receptor	BC067537|IL7R|3575|interleukin 7 receptor	BC067538|IL7R|3575|interleukin 7 receptor	BC067539|IL7R|3575|interleukin 7 receptor	BC067540|IL7R|3575|interleukin 7 receptor	BC069999|IL7R|3575|interleukin 7 receptor	M29696|IL7R|3575|interleukin 7 receptor	AK315251|IL7R|3575|interleukin 7 receptor
hg19_v1_chr3_-_123339178_123339390	0.280749	SOX2.p2	BC113458|MYLK|4638|myosin light chain kinase	BC113456|MYLK|4638|myosin light chain kinase	BC100761|MYLK|4638|myosin light chain kinase	BC100762|MYLK|4638|myosin light chain kinase	BC100763|MYLK|4638|myosin light chain kinase	AF096773|MYLK|4638|myosin light chain kinase	AF096774|MYLK|4638|myosin light chain kinase	AF096775|MYLK|4638|myosin light chain kinase	AK314412|MYLK|4638|myosin light chain kinase	BC017811|MYLK|4638|myosin light chain kinase	BC107783|MYLK|4638|myosin light chain kinase	Y09530|MYLK|4638|myosin light chain kinase	BC064420|MYLK|4638|myosin light chain kinase	AK314443|MYLK|4638|myosin light chain kinase
hg19_v1_chr11_-_10830452_10830503	0.280323	SOX2.p2	AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr5_-_141338626_141338626	0.279872	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg19_v1_chr17_-_56065596_56065640	0.279548	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr4_+_77953942_77954068	0.278128	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg19_v1_chr15_-_64995346_64995374	0.278103	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr11_+_5710816_5710877	0.277938	SOX2.p2	AK298934|TRIM22|10346|tripartite motif containing 22	NM_001199573|TRIM22|10346|tripartite motif containing 22	NM_006074|TRIM22|10346|tripartite motif containing 22
hg19_v1_chr3_-_123339423_123339529	0.277099	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg19_v1_chr12_+_53443834_53443966	0.276394	SOX2.p2	AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr5_+_147774274_147774339	0.276088	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg19_v1_chr14_+_91580967_91581087	0.274072	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chrX_+_65384078_65384206	0.273955	SOX2.p2	NM_001130860|HEPH|9843|hephaestin	AK311043|HEPH|9843|hephaestin	AB014598|HEPH|9843|hephaestin	NM_014799|HEPH|9843|hephaestin	AY358990|HEPH|9843|hephaestin	AK307761|HEPH|9843|hephaestin
hg19_v1_chr5_-_88119604_88119743	0.273375	SOX2.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chr4_-_70626429_70626429	0.271921	SOX2.p2	BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1	NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1
hg19_v1_chr11_+_17332454_17332513	0.269575	SOX2.p2	
hg19_v1_chr3_-_114343791_114343798	0.268422	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr4_+_156680125_156680283	0.267657	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg19_v1_chr5_-_38595506_38595506	0.266711	SOX2.p2	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha	AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha	NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha
hg19_v1_chr15_+_57210972_57211029	0.266079	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg19_v1_chr5_-_16936371_16936400	0.265515	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg19_v1_chr13_+_58205788_58205788	0.26505	SOX2.p2	NM_001040429|PCDH17|27253|protocadherin 17
hg19_v1_chr12_+_60083125_60083154	0.263403	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg19_v1_chr15_-_64995388_64995416	0.262167	SOX2.p2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr6_+_114178516_114178953	0.260686	SOX2.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg19_v1_chr4_-_7941092_7941684	0.260082	SOX2.p2	AK297631|AFAP1|60312|actin filament associated protein 1	AK290807|AFAP1|60312|actin filament associated protein 1	NM_001134647|AFAP1|60312|actin filament associated protein 1	NM_198595|AFAP1|60312|actin filament associated protein 1
hg19_v1_chr15_-_64995459_64995479	0.258065	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg19_v1_chr11_-_10830299_10830450	0.257966	SOX2.p2	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2
hg19_v1_chr8_-_74659082_74659235	0.257194	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr4_-_186877413_186877531	0.256838	SOX2.p2	AK295742|SORBS2|8470|sorbin and SH3 domain containing 2	AK056628|SORBS2|8470|sorbin and SH3 domain containing 2	BC035329|SORBS2|8470|sorbin and SH3 domain containing 2	AB018320|SORBS2|8470|sorbin and SH3 domain containing 2
hg19_v1_chr10_+_104535887_104536023	0.256119	SOX2.p2	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26	AY656171|C10orf26|54838|chromosome 10 open reading frame 26	AK056285|C10orf26|54838|chromosome 10 open reading frame 26	BC113857|C10orf26|54838|chromosome 10 open reading frame 26	BC114465|C10orf26|54838|chromosome 10 open reading frame 26
hg19_v1_chr7_+_44788453_44788529	0.255941	SOX2.p2	AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2	NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr2_-_136873740_136873857	0.254432	SOX2.p2	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4
hg19_v1_chr8_-_74659056_74659079	0.253097	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|uncharacterized LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg19_v1_chr5_-_111093792_111093914	0.252252	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr11_-_72385411_72385496	0.250579	SOX2.p2	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated
hg19_v1_chr19_+_11649578_11649740	0.249434	SOX2.p2	BC022015|CNN1|1264|calponin 1, basic, smooth muscle	NM_001299|CNN1|1264|calponin 1, basic, smooth muscle	AK316406|CNN1|1264|calponin 1, basic, smooth muscle	BC036307|CNN1|1264|calponin 1, basic, smooth muscle	D17408|CNN1|1264|calponin 1, basic, smooth muscle	U37019|CNN1|1264|calponin 1, basic, smooth muscle	AK223234|CNN1|1264|calponin 1, basic, smooth muscle	AK301888|CNN1|1264|calponin 1, basic, smooth muscle	AK313255|CNN1|1264|calponin 1, basic, smooth muscle	S80560|CNN1|1264|calponin 1, basic, smooth muscle
hg19_v1_chr2_+_207406815_207406857	0.249347	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg19_v1_chr2_-_55199894_55199922	0.248252	SOX2.p2	
hg19_v1_chr6_-_90062439_90062441	0.246847	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr1_+_164528914_164529059	0.246743	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg19_v1_chr5_+_121647773_121647943	0.246513	SOX2.p2	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein	NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein	NM_005460|SNCAIP|9627|synuclein, alpha interacting protein	BC094759|SNCAIP|9627|synuclein, alpha interacting protein	BC040552|SNCAIP|9627|synuclein, alpha interacting protein	AK304646|SNCAIP|9627|synuclein, alpha interacting protein	AK310835|SNCAIP|9627|synuclein, alpha interacting protein	AF076929|SNCAIP|9627|synuclein, alpha interacting protein	BC033743|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr11_+_128563973_128563988	0.245327	SOX2.p2	M93255|FLI1|2313|Friend leukemia virus integration 1	AK300153|FLI1|2313|Friend leukemia virus integration 1	M98833|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr5_+_140797243_140797259	0.244728	SOX2.p2	NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr15_-_58306185_58306294	0.244528	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg19_v1_chr1_+_84630374_84630386	0.244462	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr17_-_3571905_3571972	0.244434	SOX2.p2	AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v1_chr13_-_33760215_33760215	0.244143	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr17_+_16945766_16946162	0.242936	SOX2.p2	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein	NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein	BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein	AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein	AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein	AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein
hg19_v1_chr3_-_168864066_168864092	0.242923	SOX2.p2	BC130520|MECOM|2122|MDS1 and EVI1 complex locus	BC143951|MECOM|2122|MDS1 and EVI1 complex locus	BC143952|MECOM|2122|MDS1 and EVI1 complex locus	AF164154|MECOM|2122|MDS1 and EVI1 complex locus	AF164155|MECOM|2122|MDS1 and EVI1 complex locus	AF164156|MECOM|2122|MDS1 and EVI1 complex locus	AF164157|MECOM|2122|MDS1 and EVI1 complex locus	NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus	NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus	NM_005241|MECOM|2122|MDS1 and EVI1 complex locus	X54989|MECOM|2122|MDS1 and EVI1 complex locus
hg19_v1_chr6_+_148664124_148664259	0.242214	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr7_+_134464372_134464407	0.24138	SOX2.p2	AK298524|CALD1|800|caldesmon 1	AK304729|CALD1|800|caldesmon 1	AF247820|CALD1|800|caldesmon 1	M83216|CALD1|800|caldesmon 1
hg19_v1_chr4_+_86699846_86699850	0.240994	SOX2.p2	NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24
hg19_v1_chr15_+_67430358_67430358	0.240656	SOX2.p2	AK298139|SMAD3|4088|SMAD family member 3	NM_001145103|SMAD3|4088|SMAD family member 3
hg19_v1_chr11_-_10879365_10879672	0.240535	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg19_v1_chr10_+_225932_225961	0.240478	SOX2.p2	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11	X86098|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11	DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11	AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr4_-_24586015_24586137	0.240373	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr9_+_91003238_91003428	0.240036	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg19_v1_chr22_+_38864015_38864237	0.238467	SOX2.p2	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v1_chr1_-_193155723_193155742	0.237026	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg19_v1_chr10_-_65028825_65029005	0.236662	SOX2.p2	BC126403|JMJD1C|221037|jumonji domain containing 1C	BC143722|JMJD1C|221037|jumonji domain containing 1C	BX537954|JMJD1C|221037|jumonji domain containing 1C	NM_004241|JMJD1C|221037|jumonji domain containing 1C	BC108649|JMJD1C|221037|jumonji domain containing 1C
hg19_v1_chr13_-_41593491_41593507	0.236623	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr2_-_133429069_133429151	0.236353	SOX2.p2	NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1	AK309668|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr5_+_140729723_140729827	0.235791	SOX2.p2	AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1	AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1	BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1	NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1
hg19_v1_chr1_-_201476241_201476245	0.234996	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr17_-_76921076_76921155	0.234534	SOX2.p2	X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr9_+_116356407_116356556	0.233558	SOX2.p2	BC018072|RGS3|5998|regulator of G-protein signaling 3	BC019039|RGS3|5998|regulator of G-protein signaling 3
hg19_v1_chr3_-_58563490_58563490	0.233411	SOX2.p2	AF035283|FAM107A|11170|family with sequence similarity 107, member A	NM_001076778|FAM107A|11170|family with sequence similarity 107, member A	NM_007177|FAM107A|11170|family with sequence similarity 107, member A
hg19_v1_chr17_-_7297826_7297888	0.233338	SOX2.p2	AK124006|PLSCR3|57048|phospholipid scramblase 3	AF289602|PLSCR3|57048|phospholipid scramblase 3	BC028080|PLSCR3|57048|phospholipid scramblase 3	AK098229|PLSCR3|57048|phospholipid scramblase 3	AK075188|PLSCR3|57048|phospholipid scramblase 3	AK314643|PLSCR3|57048|phospholipid scramblase 3	BC093026|PLSCR3|57048|phospholipid scramblase 3	AF159442|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr1_+_150039341_150039438	0.232573	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr5_-_121414011_121414059	0.230069	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg19_v1_chr21_-_35014013_35014159	0.22961	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg19_v1_chr1_+_145883867_145883867	0.229539	SOX2.p2	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C
hg19_v1_chr13_-_72440143_72440375	0.229194	SOX2.p2	AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)	BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)	AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)
hg19_v1_chr8_-_38325241_38325362	0.228325	SOX2.p2	AK291754|FGFR1|2260|fibroblast growth factor receptor 1	AK309947|FGFR1|2260|fibroblast growth factor receptor 1	AK292470|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1	NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr15_+_80364902_80364950	0.228191	SOX2.p2	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6	NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6	AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6	AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr11_+_128563772_128563824	0.227987	SOX2.p2	NM_001167681|FLI1|2313|Friend leukemia virus integration 1	NM_002017|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr11_-_63536112_63536281	0.227228	SOX2.p2	NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95
hg19_v1_chr14_+_103592663_103592873	0.225932	SOX2.p2	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2
hg19_v1_chr14_+_91580467_91580558	0.22533	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr1_-_43855473_43855484	0.225118	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg19_v1_chr2_+_66662516_66662531	0.225031	SOX2.p2	AL832770|MEIS1|4211|Meis homeobox 1	BC043503|MEIS1|4211|Meis homeobox 1	NM_002398|MEIS1|4211|Meis homeobox 1
hg19_v1_chr1_-_201476248_201476386	0.223901	SOX2.p2	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr5_+_140864626_140864743	0.223503	SOX2.p2	BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4	AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4	NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4	BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4
hg19_v1_chr15_-_49338496_49338777	0.223046	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg19_v1_chr14_+_91580713_91580785	0.22285	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr1_-_155177685_155177771	0.222028	SOX2.p2	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3	NM_001252607|THBS3|7059|thrombospondin 3	NM_001252608|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3
hg19_v1_chr21_-_28339405_28339473	0.219725	SOX2.p2	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v1_chr6_-_152958533_152958533	0.219003	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chr2_+_237478379_237478477	0.218998	SOX2.p2	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7	AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7
hg19_v1_chr20_-_20036685_20036689	0.217735	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg19_v1_chr6_-_90062349_90062437	0.217671	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chrX_+_100878101_100878182	0.217456	SOX2.p2	AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3	NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3	BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3	AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3	AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3	BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3	CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3
hg19_v1_chr14_+_91580356_91580455	0.217341	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg19_v1_chr2_+_66662692_66662988	0.217317	SOX2.p2	BC036511|MEIS1|4211|Meis homeobox 1	AK314949|MEIS1|4211|Meis homeobox 1	U85707|MEIS1|4211|Meis homeobox 1
hg19_v1_chr1_+_84630014_84630064	0.217189	SOX2.p2	AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg19_v1_chr11_-_102714240_102714353	0.216963	SOX2.p2	DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v1_chr19_+_48972464_48972572	0.216864	SOX2.p2	NM_004228|CYTH2|9266|cytohesin 2	NM_017457|CYTH2|9266|cytohesin 2
hg19_v1_chr12_-_71148383_71148538	0.216349	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr12_+_53442732_53442789	0.214788	SOX2.p2	AF518728|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	NM_015319|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)	BC131503|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg19_v1_chr17_+_3377346_3377403	0.214482	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg19_v1_chr12_+_48516428_48516562	0.213959	SOX2.p2	D21861|PFKM|5213|phosphofructokinase, muscle	NM_001166687|PFKM|5213|phosphofructokinase, muscle	NM_001166688|PFKM|5213|phosphofructokinase, muscle	Y00698|PFKM|5213|phosphofructokinase, muscle	BC000534|PFKM|5213|phosphofructokinase, muscle	BC012799|PFKM|5213|phosphofructokinase, muscle	BC013298|PFKM|5213|phosphofructokinase, muscle	BC007798|PFKM|5213|phosphofructokinase, muscle
hg19_v1_chr5_-_111093251_111093465	0.21288	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr10_+_71562275_71562307	0.212458	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg19_v1_chr5_+_162930230_162930347	0.210721	SOX2.p2	DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta	DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta	NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta	AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta	AK291919|MAT2B|27430|methionine adenosyltransferase II, beta	BC005218|MAT2B|27430|methionine adenosyltransferase II, beta	AY358695|MAT2B|27430|methionine adenosyltransferase II, beta
hg19_v1_chr17_-_1412995_1413071	0.210427	SOX2.p2	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K
hg19_v1_chr6_+_122720685_122720706	0.210249	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_001243094|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg19_v1_chr1_-_225840660_225840915	0.209948	SOX2.p2	AF519769|ENAH|55740|enabled homolog (Drosophila)	AY345143|ENAH|55740|enabled homolog (Drosophila)	AK290179|ENAH|55740|enabled homolog (Drosophila)	BC095481|ENAH|55740|enabled homolog (Drosophila)	NM_001008493|ENAH|55740|enabled homolog (Drosophila)	NM_018212|ENAH|55740|enabled homolog (Drosophila)
hg19_v1_chr8_-_38325524_38325691	0.208616	SOX2.p2	X51803|FGFR1|2260|fibroblast growth factor receptor 1	X57119|FGFR1|2260|fibroblast growth factor receptor 1	X57120|FGFR1|2260|fibroblast growth factor receptor 1	X57121|FGFR1|2260|fibroblast growth factor receptor 1	X57122|FGFR1|2260|fibroblast growth factor receptor 1	M37722|FGFR1|2260|fibroblast growth factor receptor 1	M34185|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr1_-_36097137_36097137	0.208538	SOX2.p2	AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2
hg19_v1_chr5_+_112073555_112073591	0.207774	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg19_v1_chr3_+_25469833_25469901	0.206513	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr7_+_149570004_149570080	0.20621	SOX2.p2	AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2
hg19_v1_chr12_-_56615484_56615661	0.203028	SOX2.p2	NM_001242826|RNF41|10193|ring finger protein 41	BC011626|RNF41|10193|ring finger protein 41	BC095418|RNF41|10193|ring finger protein 41	BC036267|RNF41|10193|ring finger protein 41
hg19_v1_chr1_-_153606567_153606567	0.202114	SOX2.p2	NM_001024210|S100A13|6284|S100 calcium binding protein A13
hg19_v1_chr12_-_56615679_56615772	0.20196	SOX2.p2	BC024284|RNF41|10193|ring finger protein 41	AK300752|RNF41|10193|ring finger protein 41	NM_005785|RNF41|10193|ring finger protein 41	NM_194358|RNF41|10193|ring finger protein 41	AK314811|RNF41|10193|ring finger protein 41	AK304576|RNF41|10193|ring finger protein 41	NM_194359|RNF41|10193|ring finger protein 41
hg19_v1_chr20_-_50384899_50384957	0.201783	SOX2.p2	NM_006045|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr11_+_128563993_128564117	0.201164	SOX2.p2	X67001|FLI1|2313|Friend leukemia virus integration 1	S45205|FLI1|2313|Friend leukemia virus integration 1	BC010115|FLI1|2313|Friend leukemia virus integration 1	BC001670|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr22_-_36236264_36236318	0.19957	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr5_+_140797270_140797426	0.199473	SOX2.p2	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7	AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7
hg19_v1_chr2_+_12857885_12857947	0.198334	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chr1_-_43855448_43855454	0.198325	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg19_v1_chrY_+_15815446_15815446	0.198263	SOX2.p2	AF000989|TMSB4Y|9087|thymosin beta 4, Y-linked	NM_004202|TMSB4Y|9087|thymosin beta 4, Y-linked
hg19_v1_chr17_-_56065474_56065594	0.198087	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg19_v1_chr6_+_44187241_44187471	0.197842	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg19_v1_chr19_-_44831907_44832079	0.197291	SOX2.p2	AL122078|ZFP112|7771|zinc finger protein 112 homolog (mouse)	AK026230|ZFP112|7771|zinc finger protein 112 homolog (mouse)
hg19_v1_chr1_+_177140062_177140095	0.196808	SOX2.p2	AK296524|FAM5B|57795|family with sequence similarity 5, member B
hg19_v1_chr22_-_36236330_36236351	0.196662	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr12_-_106532447_106532918	0.195108	SOX2.p2	AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1	AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1
hg19_v1_chr3_+_148583042_148583094	0.195088	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg19_v1_chrX_-_153599581_153599650	0.19499	SOX2.p2	AB191259|FLNA|2316|filamin A, alpha	AB371575|FLNA|2316|filamin A, alpha	AB371577|FLNA|2316|filamin A, alpha	AB371578|FLNA|2316|filamin A, alpha	AB371579|FLNA|2316|filamin A, alpha	AB191260|FLNA|2316|filamin A, alpha	AB371574|FLNA|2316|filamin A, alpha	AB371576|FLNA|2316|filamin A, alpha	AK090427|FLNA|2316|filamin A, alpha
hg19_v1_chr8_+_38585703_38585703	0.194789	SOX2.p2	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1	NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1
hg19_v1_chr8_+_79578258_79578383	0.194283	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg19_v1_chr3_+_132318980_132318980	0.194257	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg19_v1_chr17_-_55980749_55980749	0.194219	SOX2.p2	AK000746|CUEDC1|404093|CUE domain containing 1	NM_017949|CUEDC1|404093|CUE domain containing 1
hg19_v1_chr20_+_19870209_19870245	0.19322	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg19_v1_chr20_-_50384861_50384895	0.192047	SOX2.p2	AB014511|ATP9A|10079|ATPase, class II, type 9A	AK299064|ATP9A|10079|ATPase, class II, type 9A
hg19_v1_chr5_-_39364562_39364654	0.191828	SOX2.p2	K02766|C9|735|complement component 9	DQ891410|C9|735|complement component 9	X02176|C9|735|complement component 9	AK308045|C9|735|complement component 9	BC020721|C9|735|complement component 9	NM_001737|C9|735|complement component 9
hg19_v1_chr2_+_210444364_210444424	0.191759	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr1_+_10459084_10459174	0.191688	SOX2.p2	NM_002631|PGD|5226|phosphogluconate dehydrogenase	AK300952|PGD|5226|phosphogluconate dehydrogenase	AK290404|PGD|5226|phosphogluconate dehydrogenase	AK296889|PGD|5226|phosphogluconate dehydrogenase	AK303898|PGD|5226|phosphogluconate dehydrogenase	AK304423|PGD|5226|phosphogluconate dehydrogenase	BC000368|PGD|5226|phosphogluconate dehydrogenase	U30255|PGD|5226|phosphogluconate dehydrogenase	AK298830|PGD|5226|phosphogluconate dehydrogenase
hg19_v1_chr9_-_34620460_34620482	0.19133	SOX2.p2	CR541889|DCTN3|11258|dynactin 3 (p22)	DQ891980|DCTN3|11258|dynactin 3 (p22)	EU176665|DCTN3|11258|dynactin 3 (p22)	BC000319|DCTN3|11258|dynactin 3 (p22)	BC003004|DCTN3|11258|dynactin 3 (p22)	AF082513|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr10_-_98336445_98336573	0.191326	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr9_-_19786886_19787016	0.190872	SOX2.p2	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v1_chr6_-_90062450_90062581	0.190845	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr9_-_34620483_34620488	0.189973	SOX2.p2	BC107697|DCTN3|11258|dynactin 3 (p22)	AK314730|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr13_-_41593405_41593482	0.189627	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg19_v1_chr5_+_140749830_140749961	0.189594	SOX2.p2	BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3	AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3	NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3
hg19_v1_chr10_-_92681025_92681031	0.189408	SOX2.p2	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr5_+_43602738_43602941	0.187632	SOX2.p2	AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase	NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase	AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase	BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase
hg19_v1_chr8_-_17580024_17580083	0.18752	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg19_v1_chr7_+_150690838_150690891	0.186181	SOX2.p2	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr20_-_39317875_39317880	0.186148	SOX2.p2	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)
hg19_v1_chr1_-_201475966_201475966	0.185115	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg19_v1_chr9_-_95298251_95298373	0.184901	SOX2.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v1_chr4_+_71587674_71587767	0.184487	SOX2.p2	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3	NM_014961|RUFY3|22902|RUN and FYVE domain containing 3	BC051716|RUFY3|22902|RUN and FYVE domain containing 3	BC053837|RUFY3|22902|RUN and FYVE domain containing 3	BC098433|RUFY3|22902|RUN and FYVE domain containing 3	AB020678|RUFY3|22902|RUN and FYVE domain containing 3	BC071988|RUFY3|22902|RUN and FYVE domain containing 3
hg19_v1_chr17_-_7145645_7145740	0.184211	SOX2.p2	CR457043|GABARAP|11337|GABA(A) receptor-associated protein	CR542235|GABARAP|11337|GABA(A) receptor-associated protein	BC106748|GABARAP|11337|GABA(A) receptor-associated protein	BC106749|GABARAP|11337|GABA(A) receptor-associated protein	AF161586|GABARAP|11337|GABA(A) receptor-associated protein	AF044671|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr1_+_66798095_66798096	0.18376	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg19_v1_chr3_+_69812961_69812961	0.183615	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg19_v1_chr9_-_34620489_34620497	0.182615	SOX2.p2	NM_007234|DCTN3|11258|dynactin 3 (p22)	NM_024348|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr9_-_34620499_34620533	0.182051	SOX2.p2	AK091661|DCTN3|11258|dynactin 3 (p22)
hg19_v1_chr22_+_31003069_31003317	0.181354	SOX2.p2	NM_000355|TCN2|6948|transcobalamin II	NM_001184726|TCN2|6948|transcobalamin II	AK313711|TCN2|6948|transcobalamin II	BC011239|TCN2|6948|transcobalamin II	BC001176|TCN2|6948|transcobalamin II	L02647|TCN2|6948|transcobalamin II	L02648|TCN2|6948|transcobalamin II	AK225445|TCN2|6948|transcobalamin II	CR456591|TCN2|6948|transcobalamin II	M60396|TCN2|6948|transcobalamin II	CU013191|TCN2|6948|transcobalamin II	CU013479|TCN2|6948|transcobalamin II	DQ892811|TCN2|6948|transcobalamin II	DQ896057|TCN2|6948|transcobalamin II
hg19_v1_chr1_+_221052845_221052984	0.180994	SOX2.p2	AK127923|HLX|3142|H2.0-like homeobox	AK313298|HLX|3142|H2.0-like homeobox	BC033808|HLX|3142|H2.0-like homeobox
hg19_v1_chr16_+_15528324_15528477	0.180989	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45
hg19_v1_chr3_+_20081523_20081523	0.180936	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg19_v1_chr11_+_129991582_129991674	0.180007	SOX2.p2	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr12_-_49504337_49504513	0.179357	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg19_v1_chrX_-_15872938_15872938	0.1793	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr17_-_76921205_76921452	0.17918	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr17_-_7298160_7298161	0.178996	SOX2.p2	NM_001201576|PLSCR3|57048|phospholipid scramblase 3	NM_020360|PLSCR3|57048|phospholipid scramblase 3
hg19_v1_chr6_+_122720750_122720882	0.178837	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg19_v1_chrX_-_15872921_15872937	0.17873	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr4_+_41614911_41614927	0.177649	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr19_+_48972574_48972764	0.177647	SOX2.p2	AB209573|CYTH2|9266|cytohesin 2	BC038713|CYTH2|9266|cytohesin 2	AK292405|CYTH2|9266|cytohesin 2	U70728|CYTH2|9266|cytohesin 2	AK299590|CYTH2|9266|cytohesin 2	BC004361|CYTH2|9266|cytohesin 2	DQ892565|CYTH2|9266|cytohesin 2	DQ896856|CYTH2|9266|cytohesin 2	X99753|CYTH2|9266|cytohesin 2
hg19_v1_chr1_+_183774214_183774368	0.17708	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg19_v1_chr9_-_123476578_123476857	0.176994	SOX2.p2	AY358370|MEGF9|1955|multiple EGF-like-domains 9	AK295380|MEGF9|1955|multiple EGF-like-domains 9	NM_001080497|MEGF9|1955|multiple EGF-like-domains 9
hg19_v1_chrX_+_118714297_118714297	0.176903	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A
hg19_v1_chr9_-_74979625_74979825	0.176211	SOX2.p2	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5	BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr1_-_108786663_108786702	0.176208	SOX2.p2	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6	BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4	AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4	NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4
hg19_v1_chr4_-_139163222_139163506	0.175908	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v1_chr6_-_32191779_32191843	0.174054	SOX2.p2	U95299|NOTCH4|4855|notch 4	BC140782|NOTCH4|4855|notch 4	BC144540|NOTCH4|4855|notch 4	BC144541|NOTCH4|4855|notch 4	BC063815|NOTCH4|4855|notch 4	AK290785|NOTCH4|4855|notch 4	NM_004557|NOTCH4|4855|notch 4
hg19_v1_chr18_-_25756946_25757128	0.173405	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v1_chr6_+_139456240_139456272	0.173221	SOX2.p2	BC070068|HECA|51696|headcase homolog (Drosophila)	AB033492|HECA|51696|headcase homolog (Drosophila)	NM_016217|HECA|51696|headcase homolog (Drosophila)
hg19_v1_chr5_-_16742336_16742338	0.173213	SOX2.p2	AK316138|MYO10|4651|myosin X
hg19_v1_chr14_-_23288912_23289019	0.173212	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v1_chr17_-_7145742_7145784	0.171636	SOX2.p2	AK312205|GABARAP|11337|GABA(A) receptor-associated protein	AB030711|GABARAP|11337|GABA(A) receptor-associated protein	AF183425|GABARAP|11337|GABA(A) receptor-associated protein	AF067171|GABARAP|11337|GABA(A) receptor-associated protein	NM_007278|GABARAP|11337|GABA(A) receptor-associated protein	AK098634|GABARAP|11337|GABA(A) receptor-associated protein
hg19_v1_chr19_-_12780448_12780464	0.170987	SOX2.p2	AF078861|WDR83OS|51398|WD repeat domain 83 opposite strand	AF151898|WDR83OS|51398|WD repeat domain 83 opposite strand	NM_016145|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr7_+_55433140_55433140	0.170816	SOX2.p2	AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr11_-_14386051_14386051	0.170741	SOX2.p2	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr11_-_73693883_73693888	0.169335	SOX2.p2	AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)
hg19_v1_chr1_-_31345361_31345435	0.169076	SOX2.p2	AL049426|SDC3|9672|syndecan 3
hg19_v1_chr7_-_150924220_150924330	0.168994	SOX2.p2	BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v1_chr10_-_29754478_29754624	0.168827	SOX2.p2	BX648589|SVIL|6840|supervillin
hg19_v1_chr9_+_132934685_132934942	0.168709	SOX2.p2	BC004856|NCS1|23413|neuronal calcium sensor 1	NM_014286|NCS1|23413|neuronal calcium sensor 1	AF134479|NCS1|23413|neuronal calcium sensor 1	AF186409|NCS1|23413|neuronal calcium sensor 1	X84048|NCS1|23413|neuronal calcium sensor 1
hg19_v1_chr1_+_36387788_36387930	0.168277	SOX2.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr11_-_66445218_66445305	0.167849	SOX2.p2	AK095158|RBM4B|83759|RNA binding motif protein 4B	BC004951|RBM4B|83759|RNA binding motif protein 4B	NM_031492|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr14_-_105444693_105444723	0.167816	SOX2.p2	NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2
hg19_v1_chr1_-_153643456_153643471	0.16776	SOX2.p2	AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr13_+_36050885_36050965	0.167724	SOX2.p2	AK294737|NBEA|26960|neurobeachin	NM_001204197|NBEA|26960|neurobeachin	AK315939|NBEA|26960|neurobeachin
hg19_v1_chr2_+_210444154_210444187	0.166933	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg19_v1_chr16_+_89989686_89989830	0.166602	SOX2.p2	NM_006086|TUBB3|10381|tubulin, beta 3 class III	AK314616|TUBB3|10381|tubulin, beta 3 class III	AK058140|TUBB3|10381|tubulin, beta 3 class III	AK223039|TUBB3|10381|tubulin, beta 3 class III	AK307201|TUBB3|10381|tubulin, beta 3 class III	BC000748|TUBB3|10381|tubulin, beta 3 class III	BC003021|TUBB3|10381|tubulin, beta 3 class III	BC064975|TUBB3|10381|tubulin, beta 3 class III	AF427491|TUBB3|10381|tubulin, beta 3 class III	U47634|TUBB3|10381|tubulin, beta 3 class III	S62643|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr18_+_32073245_32073284	0.166288	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg19_v1_chr12_-_9913415_9913496	0.166104	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg19_v1_chr5_-_121413967_121413979	0.165981	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg19_v1_chr10_+_22605300_22605351	0.165673	SOX2.p2	NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough	AY542159|COMMD3|23412|COMM domain containing 3
hg19_v1_chr19_+_19303732_19303772	0.165336	SOX2.p2	AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein
hg19_v1_chr12_-_71148063_71148236	0.16498	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr15_-_42186274_42186274	0.164669	SOX2.p2	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5
hg19_v1_chr11_-_85780899_85780922	0.164204	SOX2.p2	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein
hg19_v1_chr6_-_167275657_167275800	0.163848	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr4_-_76598611_76598693	0.163721	SOX2.p2	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr7_-_115608366_115608366	0.163389	SOX2.p2	AJ608795|TFEC|22797|transcription factor EC	NM_001244583|TFEC|22797|transcription factor EC
hg19_v1_chr12_-_108154908_108154913	0.163221	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg19_v1_chr5_-_111093030_111093133	0.162348	SOX2.p2	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg19_v1_chr17_-_67138013_67138137	0.162294	SOX2.p2	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v1_chr5_-_121413906_121413961	0.161287	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg19_v1_chr11_+_69455837_69455875	0.161076	SOX2.p2	NM_053056|CCND1|595|cyclin D1
hg19_v1_chr19_-_1567875_1568056	0.160454	SOX2.p2	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)	DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)	AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)	NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)
hg19_v1_chr15_-_89089792_89089911	0.159898	SOX2.p2	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)	NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)
hg19_v1_chr7_+_23286420_23286476	0.159527	SOX2.p2	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb	BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb	BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb	BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr6_+_21593963_21594781	0.159067	SOX2.p2	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4	AF070669|SOX4|6659|SRY (sex determining region Y)-box 4	AF124147|SOX4|6659|SRY (sex determining region Y)-box 4	BC072668|SOX4|6659|SRY (sex determining region Y)-box 4	X70683|SOX4|6659|SRY (sex determining region Y)-box 4	EU446655|SOX4|6659|SRY (sex determining region Y)-box 4
hg19_v1_chr19_+_1269244_1269366	0.157066	SOX2.p2	NM_001280|CIRBP|1153|cold inducible RNA binding protein	AK095781|CIRBP|1153|cold inducible RNA binding protein	AK304185|CIRBP|1153|cold inducible RNA binding protein	AK304470|CIRBP|1153|cold inducible RNA binding protein	AK311601|CIRBP|1153|cold inducible RNA binding protein	AK128423|CIRBP|1153|cold inducible RNA binding protein	AF021336|CIRBP|1153|cold inducible RNA binding protein	AK094781|CIRBP|1153|cold inducible RNA binding protein	D78134|CIRBP|1153|cold inducible RNA binding protein	BC000901|CIRBP|1153|cold inducible RNA binding protein	BC000403|CIRBP|1153|cold inducible RNA binding protein
hg19_v1_chr6_-_83903632_83903693	0.157007	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3	NM_001199917|PGM3|5238|phosphoglucomutase 3
hg19_v1_chr2_+_46926323_46926479	0.156455	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr2_+_201997687_201997758	0.156359	SOX2.p2	NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator
hg19_v1_chr3_-_87040246_87040256	0.156244	SOX2.p2	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg19_v1_chr19_+_44100543_44100543	0.156188	SOX2.p2	AK026353|ZNF576|79177|zinc finger protein 576	NM_024327|ZNF576|79177|zinc finger protein 576
hg19_v1_chr2_-_26205327_26205367	0.156132	SOX2.p2	BC092406|KIF3C|3797|kinesin family member 3C	AK293738|KIF3C|3797|kinesin family member 3C	AK315324|KIF3C|3797|kinesin family member 3C	BC042486|KIF3C|3797|kinesin family member 3C	BX571741|KIF3C|3797|kinesin family member 3C
hg19_v1_chr22_-_36236421_36236629	0.155693	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v1_chr1_-_153643433_153643454	0.155443	SOX2.p2	U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa	AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr18_-_21852189_21852195	0.155381	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr22_+_35777051_35777086	0.155071	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr5_-_140700339_140700365	0.15506	SOX2.p2	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr12_-_71148331_71148370	0.154667	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg19_v1_chr1_-_153643417_153643427	0.154485	SOX2.p2	AK223326|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr7_-_47622127_47622246	0.153789	SOX2.p2	AB208995|TNS3|64759|tensin 3
hg19_v1_chr2_-_55277421_55277441	0.153326	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg19_v1_chr11_+_113931228_113931287	0.15317	SOX2.p2	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16	NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16
hg19_v1_chr16_-_75529278_75529281	0.152716	SOX2.p2	
hg19_v1_chr15_+_80696569_80696899	0.152548	SOX2.p2	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2	DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v1_chr5_+_72112417_72112564	0.1525	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg19_v1_chr12_-_10022457_10022457	0.152079	SOX2.p2	NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B
hg19_v1_chr11_+_118478305_118478450	0.151727	SOX2.p2	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1
hg19_v1_chr17_-_76921453_76921501	0.151526	SOX2.p2	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2	NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg19_v1_chr10_-_92680784_92680848	0.150118	SOX2.p2	DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)
hg19_v1_chr1_-_153643428_153643432	0.149893	SOX2.p2	BC000382|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr4_-_76598563_76598596	0.149717	SOX2.p2	BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr22_+_19711065_19711070	0.149701	SOX2.p2	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide	J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide
hg19_v1_chr4_-_24586145_24586175	0.149651	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr22_+_39052628_39052669	0.148741	SOX2.p2	AK307265|CBY1|25776|chibby homolog 1 (Drosophila)	AK311928|CBY1|25776|chibby homolog 1 (Drosophila)	NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)	NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr6_-_11232901_11232920	0.148635	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr1_+_6685209_6685278	0.148376	SOX2.p2	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3	AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3	BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3	DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr11_-_61584228_61584375	0.148095	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg19_v1_chr15_-_90347173_90347178	0.148036	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg19_v1_chr10_+_35415768_35415957	0.147945	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg19_v1_chr20_+_36149606_36149733	0.147924	SOX2.p2	NM_005386|NNAT|4826|neuronatin	NM_181689|NNAT|4826|neuronatin	AK312069|NNAT|4826|neuronatin	U25034|NNAT|4826|neuronatin	BC001768|NNAT|4826|neuronatin	U25033|NNAT|4826|neuronatin	AB002392|NNAT|4826|neuronatin	BT019426|NNAT|4826|neuronatin
hg19_v1_chr2_-_133427624_133427783	0.147904	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg19_v1_chr7_-_41742666_41742705	0.147737	SOX2.p2	AF218018|INHBA|3624|inhibin, beta A	AK290584|INHBA|3624|inhibin, beta A	BC007858|INHBA|3624|inhibin, beta A	D49743|INHBA|3624|inhibin, beta A	NM_002192|INHBA|3624|inhibin, beta A
hg19_v1_chr1_+_211519705_211519705	0.147094	SOX2.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg19_v1_chr4_-_2263808_2263839	0.145303	SOX2.p2	BC002713|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr1_-_149889362_149889446	0.145289	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg19_v1_chr6_-_167275997_167276020	0.14515	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v1_chr3_-_50360109_50360280	0.144782	SOX2.p2	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2	AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2	U09577|HYAL2|8692|hyaluronoglucosaminidase 2	AK092449|HYAL2|8692|hyaluronoglucosaminidase 2	AK310963|HYAL2|8692|hyaluronoglucosaminidase 2	AK127945|HYAL2|8692|hyaluronoglucosaminidase 2	NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2	NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2
hg19_v1_chr15_+_57210852_57210885	0.144243	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg19_v1_chr7_+_5632453_5632567	0.14392	SOX2.p2	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr9_+_133710746_133710830	0.143552	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr4_-_104020964_104021036	0.143379	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg19_v1_chr1_-_203155827_203155835	0.141846	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr1_-_153643474_153643506	0.141208	SOX2.p2	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa
hg19_v1_chr3_-_114478117_114478123	0.141081	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr5_-_140700286_140700333	0.140845	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg19_v1_chr2_+_201170603_201170615	0.14065	SOX2.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr7_+_23286390_23286399	0.140354	SOX2.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr1_-_240775448_240775461	0.140134	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg19_v1_chr13_-_50367027_50367220	0.140065	SOX2.p2	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)
hg19_v1_chr22_+_39052671_39052721	0.139696	SOX2.p2	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)	AL050345|CBY1|25776|chibby homolog 1 (Drosophila)	BC016139|CBY1|25776|chibby homolog 1 (Drosophila)	AF331041|CBY1|25776|chibby homolog 1 (Drosophila)
hg19_v1_chr4_+_54243822_54243828	0.139574	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr12_-_117742856_117742856	0.139339	SOX2.p2	NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)
hg19_v1_chr16_-_67970734_67970779	0.138829	SOX2.p2	AK312208|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	Y13640|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	AK225658|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	AK298012|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	NM_002801|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10
hg19_v1_chr10_+_134000335_134000544	0.138414	SOX2.p2	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4	NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4	BC142974|DPYSL4|10570|dihydropyrimidinase-like 4	BC029280|DPYSL4|10570|dihydropyrimidinase-like 4	Y10976|DPYSL4|10570|dihydropyrimidinase-like 4	BC136329|DPYSL4|10570|dihydropyrimidinase-like 4	BC136330|DPYSL4|10570|dihydropyrimidinase-like 4
hg19_v1_chr7_+_23145916_23145916	0.138053	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg19_v1_chr8_+_110346549_110346637	0.137007	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg19_v1_chr1_+_82266081_82266081	0.136611	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg19_v1_chr13_-_31040035_31040081	0.136369	SOX2.p2	AK057120|HMGB1|3146|high mobility group box 1	AK310975|HMGB1|3146|high mobility group box 1	AK291494|HMGB1|3146|high mobility group box 1	AK304506|HMGB1|3146|high mobility group box 1	NM_002128|HMGB1|3146|high mobility group box 1
hg19_v1_chr3_+_19988861_19988941	0.136212	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr3_+_187943192_187943276	0.136211	SOX2.p2	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma	BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr7_-_148581297_148581358	0.135765	SOX2.p2	X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr3_+_183353355_183353445	0.135178	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg19_v1_chr2_-_157189040_157189286	0.135092	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg19_v1_chr6_-_131291480_131291622	0.133945	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr2_+_85360373_85360946	0.132951	SOX2.p2	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v1_chr2_+_37571752_37571874	0.13275	SOX2.p2	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase	AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase	BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase	BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase	BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase	X71125|QPCT|25797|glutaminyl-peptide cyclotransferase	BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase
hg19_v1_chr8_+_9911797_9911961	0.132447	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg19_v1_chr1_+_221052735_221052788	0.132435	SOX2.p2	AK056326|HLX|3142|H2.0-like homeobox	NM_021958|HLX|3142|H2.0-like homeobox	BC007294|HLX|3142|H2.0-like homeobox	AB208812|HLX|3142|H2.0-like homeobox	M60721|HLX|3142|H2.0-like homeobox
hg19_v1_chr17_+_59477169_59477304	0.132356	SOX2.p2	BC052566|TBX2|6909|T-box 2	NM_005994|TBX2|6909|T-box 2	BC070054|TBX2|6909|T-box 2
hg19_v1_chr15_+_57511616_57511718	0.132353	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg19_v1_chr20_-_4804067_4804321	0.132303	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg19_v1_chr3_+_193310997_193311138	0.132275	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr3_+_44690216_44690276	0.131578	SOX2.p2	NM_003420|ZNF35|7584|zinc finger protein 35	AK300581|ZNF35|7584|zinc finger protein 35	AK314821|ZNF35|7584|zinc finger protein 35	BC013597|ZNF35|7584|zinc finger protein 35	BC015892|ZNF35|7584|zinc finger protein 35	X07289|ZNF35|7584|zinc finger protein 35
hg19_v1_chr13_-_38443859_38443938	0.131404	SOX2.p2	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4
hg19_v1_chr6_-_112080284_112080333	0.13113	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg19_v1_chr1_-_203155867_203155909	0.130814	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr10_-_30024594_30024934	0.13071	SOX2.p2	AF051850|SVIL|6840|supervillin	NM_003174|SVIL|6840|supervillin
hg19_v1_chrX_+_102611379_102611462	0.130539	SOX2.p2	NM_001006612|WBP5|51186|WW domain binding protein 5	NM_001006613|WBP5|51186|WW domain binding protein 5	NM_001006614|WBP5|51186|WW domain binding protein 5	NM_016303|WBP5|51186|WW domain binding protein 5	AF125535|WBP5|51186|WW domain binding protein 5	BC023544|WBP5|51186|WW domain binding protein 5	AK312190|WBP5|51186|WW domain binding protein 5	AL833152|WBP5|51186|WW domain binding protein 5
hg19_v1_chr4_+_54243731_54243808	0.130375	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr19_+_49468587_49468620	0.130361	SOX2.p2	Y09188|FTL|2512|ferritin, light polypeptide	BC018990|FTL|2512|ferritin, light polypeptide	BC002991|FTL|2512|ferritin, light polypeptide	M11147|FTL|2512|ferritin, light polypeptide
hg19_v1_chr11_-_104034685_104034903	0.130321	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg19_v1_chr2_-_26205437_26205444	0.129526	SOX2.p2	NM_002254|KIF3C|3797|kinesin family member 3C
hg19_v1_chr21_+_43710190_43710237	0.129472	SOX2.p2	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1
hg19_v1_chr2_-_37898768_37898790	0.129381	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr11_-_66445318_66445397	0.129084	SOX2.p2	BC003503|RBM4B|83759|RNA binding motif protein 4B
hg19_v1_chr21_+_35014624_35015086	0.128899	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg19_v1_chr5_-_137475076_137475131	0.128139	SOX2.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chrX_-_77041678_77041774	0.12797	SOX2.p2	AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr15_-_48937795_48938064	0.127739	SOX2.p2	BC146854|FBN1|2200|fibrillin 1	AK304737|FBN1|2200|fibrillin 1	BC094721|FBN1|2200|fibrillin 1	NM_000138|FBN1|2200|fibrillin 1	X63556|FBN1|2200|fibrillin 1
hg19_v1_chr4_-_76598289_76598344	0.12753	SOX2.p2	AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr2_-_55277653_55277671	0.12733	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg19_v1_chr5_+_31193761_31193832	0.126373	SOX2.p2	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v1_chrX_-_10535476_10535642	0.126343	SOX2.p2	AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)	AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)	EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg19_v1_chr12_+_12938540_12938614	0.125853	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg19_v1_chr20_+_34995443_34995443	0.125512	SOX2.p2	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4
hg19_v1_chr17_+_80416606_80416679	0.125246	SOX2.p2	BC016440|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr18_+_56530060_56530179	0.124733	SOX2.p2	NM_018181|ZNF532|55205|zinc finger protein 532	AF295077|ZNF532|55205|zinc finger protein 532	BC130618|ZNF532|55205|zinc finger protein 532	BC130620|ZNF532|55205|zinc finger protein 532
hg19_v1_chr6_+_16143281_16143339	0.12435	SOX2.p2	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein
hg19_v1_chr13_-_33780142_33780186	0.124095	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg19_v1_chr14_+_58906398_58906455	0.123921	SOX2.p2	AK302579|KIAA0586|9786|KIAA0586	NM_001244193|KIAA0586|9786|KIAA0586	AK310356|KIAA0586|9786|KIAA0586	AK302718|KIAA0586|9786|KIAA0586
hg19_v1_chr9_-_74979829_74980371	0.123468	SOX2.p2	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5	BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5	BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5	NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5
hg19_v1_chr12_-_51477299_51477453	0.123403	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg19_v1_chr12_-_25055228_25055321	0.123255	SOX2.p2	CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic
hg19_v1_chr2_-_55277620_55277634	0.12312	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg19_v1_chr2_-_55277698_55277733	0.122456	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg19_v1_chr2_+_48757292_48757358	0.122026	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg19_v1_chr4_+_54243810_54243821	0.12195	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr10_-_90712510_90712579	0.121348	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chr15_+_66994669_66994680	0.121255	SOX2.p2	AF035528|SMAD6|4091|SMAD family member 6	NM_005585|SMAD6|4091|SMAD family member 6
hg19_v1_chr11_+_65408387_65408419	0.120496	SOX2.p2	
hg19_v1_chrX_-_15872905_15872913	0.120111	SOX2.p2	
hg19_v1_chr7_+_23286386_23286387	0.119669	SOX2.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr14_+_85996512_85996571	0.119339	SOX2.p2	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2
hg19_v1_chr5_-_147162251_147162257	0.119079	SOX2.p2	AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr11_-_27742224_27742325	0.119063	SOX2.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr5_-_150537335_150537442	0.118724	SOX2.p2	NM_001155|ANXA6|309|annexin A6
hg19_v1_chr10_+_63661012_63661012	0.118423	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg19_v1_chr7_-_44887663_44887675	0.118388	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg19_v1_chr3_+_138067678_138067758	0.117844	SOX2.p2	AK295640|MRAS|22808|muscle RAS oncogene homolog	NM_001252092|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chrX_+_30233674_30233692	0.117134	SOX2.p2	NM_002364|MAGEB2|4113|melanoma antigen family B, 2	AF015766|MAGEB2|4113|melanoma antigen family B, 2	AK313347|MAGEB2|4113|melanoma antigen family B, 2	BC026071|MAGEB2|4113|melanoma antigen family B, 2	AK223081|MAGEB2|4113|melanoma antigen family B, 2
hg19_v1_chr12_+_70759974_70760559	0.117109	SOX2.p2	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v1_chr17_-_62657997_62658138	0.116891	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr12_+_52056547_52056601	0.116742	SOX2.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v1_chr7_+_23286384_23286385	0.116677	SOX2.p2	AK297051|GPNMB|10457|glycoprotein (transmembrane) nmb	X76534|GPNMB|10457|glycoprotein (transmembrane) nmb
hg19_v1_chr5_-_147162175_147162231	0.116579	SOX2.p2	BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr4_+_2820540_2820540	0.116291	SOX2.p2	AB000462|SH3BP2|6452|SH3-domain binding protein 2	AB000463|SH3BP2|6452|SH3-domain binding protein 2	NM_003023|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr4_-_76598558_76598562	0.115488	SOX2.p2	AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2
hg19_v1_chr3_-_149375584_149375887	0.115037	SOX2.p2	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1	BC014052|WWTR1|25937|WW domain containing transcription regulator 1	NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1	NM_015472|WWTR1|25937|WW domain containing transcription regulator 1
hg19_v1_chr1_+_39547088_39547088	0.11477	SOX2.p2	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1	NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1
hg19_v1_chr12_-_121785652_121785683	0.114671	SOX2.p2	BC034243|ANAPC5|51433|anaphase promoting complex subunit 5
hg19_v1_chr7_-_32110979_32111044	0.114306	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v1_chr1_-_203155910_203155942	0.114188	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chrX_+_51636608_51636798	0.114025	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg19_v1_chr10_+_118350470_118350641	0.114007	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg19_v1_chr17_+_80416530_80416597	0.113989	SOX2.p2	AK297875|NARF|26502|nuclear prelamin A recognition factor	NM_001083608|NARF|26502|nuclear prelamin A recognition factor	NM_012336|NARF|26502|nuclear prelamin A recognition factor	NM_031968|NARF|26502|nuclear prelamin A recognition factor	BC000438|NARF|26502|nuclear prelamin A recognition factor	AK000929|NARF|26502|nuclear prelamin A recognition factor	AK303155|NARF|26502|nuclear prelamin A recognition factor	AF128406|NARF|26502|nuclear prelamin A recognition factor
hg19_v1_chr13_+_52598678_52598826	0.113769	SOX2.p2	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v1_chr12_-_106641675_106642020	0.113738	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg19_v1_chr5_+_61601944_61602002	0.113485	SOX2.p2	NM_001098511|KIF2A|3796|kinesin heavy chain member 2A	NM_001243952|KIF2A|3796|kinesin heavy chain member 2A	NM_001243953|KIF2A|3796|kinesin heavy chain member 2A	NM_004520|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr2_+_46926049_46926098	0.113277	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg19_v1_chr2_+_12856813_12857693	0.113265	SOX2.p2	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)	AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)	AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)	D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg19_v1_chr2_+_109204904_109205034	0.113204	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr9_-_36375965_36376036	0.113178	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg19_v1_chr11_-_117747331_117747447	0.113135	SOX2.p2	AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6	AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6	BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6	AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6	AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6
hg19_v1_chr2_+_208394756_208394806	0.112788	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr7_-_44887697_44887756	0.112605	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg19_v1_chr17_+_7487125_7487139	0.112119	SOX2.p2	AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr2_-_55277672_55277693	0.112038	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg19_v1_chr14_-_91884138_91884159	0.111896	SOX2.p2	AF070587|CCDC88C|440193|coiled-coil domain containing 88C
hg19_v1_chr5_-_146833150_146833380	0.111694	SOX2.p2	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3	EU832273|DPYSL3|1809|dihydropyrimidinase-like 3	BC039006|DPYSL3|1809|dihydropyrimidinase-like 3	D78014|DPYSL3|1809|dihydropyrimidinase-like 3	AK297223|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3	Y07818|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr3_+_129158949_129159071	0.111017	SOX2.p2	AK022525|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_018262|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052985|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052989|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	NM_052990|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244930|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AF244931|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK315103|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK001759|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK223095|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr1_+_97187174_97187394	0.110899	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg19_v1_chr1_-_168105902_168105938	0.110868	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr3_+_135741576_135741660	0.110819	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg19_v1_chr3_-_165555167_165555220	0.110522	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg19_v1_chrX_-_15872871_15872881	0.110461	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr4_+_26322627_26322646	0.110446	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr11_-_5291372_5291372	0.110362	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg19_v1_chr5_+_61602236_61602304	0.11033	SOX2.p2	AK297347|KIF2A|3796|kinesin heavy chain member 2A	AK307880|KIF2A|3796|kinesin heavy chain member 2A	EF560716|KIF2A|3796|kinesin heavy chain member 2A	EF560728|KIF2A|3796|kinesin heavy chain member 2A	EU832810|KIF2A|3796|kinesin heavy chain member 2A	GQ129246|KIF2A|3796|kinesin heavy chain member 2A	AK315866|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr2_+_208394692_208394750	0.110139	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr9_+_123850573_123850604	0.109993	SOX2.p2	NM_007018|CNTRL|11064|centriolin	BC137284|CNTRL|11064|centriolin	BC137286|CNTRL|11064|centriolin	AF513978|CNTRL|11064|centriolin
hg19_v1_chr5_+_53751430_53751619	0.109731	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	HQ258075|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg19_v1_chr3_-_69129502_69129544	0.109725	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg19_v1_chrX_-_112066353_112066353	0.109663	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg19_v1_chr4_-_87028805_87028805	0.109459	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg19_v1_chr10_-_69752385_69752431	0.109421	SOX2.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg19_v1_chr15_+_96875793_96875793	0.109186	SOX2.p2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg19_v1_chr19_+_44100734_44100787	0.108188	SOX2.p2	NM_001145347|ZNF576|79177|zinc finger protein 576	BC002981|ZNF576|79177|zinc finger protein 576
hg19_v1_chr5_+_61602065_61602100	0.108055	SOX2.p2	BC047544|KIF2A|3796|kinesin heavy chain member 2A
hg19_v1_chr11_-_62475060_62475178	0.10787	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr5_+_140810181_140810205	0.107808	SOX2.p2	AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr7_-_8302141_8302205	0.106561	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr10_+_97803064_97803699	0.106425	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg19_v1_chr1_+_161736033_161736107	0.106282	SOX2.p2	NM_007348|ATF6|22926|activating transcription factor 6	AB015856|ATF6|22926|activating transcription factor 6
hg19_v1_chr7_-_148581359_148581376	0.106169	SOX2.p2	BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr19_+_40872709_40872857	0.106108	SOX2.p2	BC000553|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr2_+_181845605_181845681	0.105772	SOX2.p2	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr2_+_24807345_24807409	0.105635	SOX2.p2	NM_003743|NCOA1|8648|nuclear receptor coactivator 1	NM_147223|NCOA1|8648|nuclear receptor coactivator 1	NM_147233|NCOA1|8648|nuclear receptor coactivator 1	AJ000881|NCOA1|8648|nuclear receptor coactivator 1	AJ000882|NCOA1|8648|nuclear receptor coactivator 1	U59302|NCOA1|8648|nuclear receptor coactivator 1
hg19_v1_chr11_-_62472901_62472984	0.105452	SOX2.p2	
hg19_v1_chr1_-_235491494_235491531	0.105273	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr9_-_129870311_129870393	0.104452	SOX2.p2	AK075026|ANGPTL2|23452|angiopoietin-like 2
hg19_v1_chr17_-_46671043_46671158	0.104278	SOX2.p2	BC117247|HOXB5|3215|homeobox B5	NM_002147|HOXB5|3215|homeobox B5	AK314964|HOXB5|3215|homeobox B5
hg19_v1_chr12_+_5603297_5603380	0.103812	SOX2.p2	BC069773|NTF3|4908|neurotrophin 3	NM_002527|NTF3|4908|neurotrophin 3	BC107075|NTF3|4908|neurotrophin 3	CR541906|NTF3|4908|neurotrophin 3
hg19_v1_chr7_+_39663257_39663359	0.103691	SOX2.p2	AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr12_-_16759430_16759432	0.103546	SOX2.p2	BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr1_-_246580710_246580713	0.103362	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg19_v1_chr4_-_83350829_83351248	0.102996	SOX2.p2	BC007392|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	CR407623|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ892871|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	DQ896119|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC071944|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC011714|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	BC018961|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr1_-_201915715_201915717	0.102801	SOX2.p2	NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr10_+_52750904_52750911	0.102589	SOX2.p2	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg19_v1_chrX_+_21958714_21958938	0.102359	SOX2.p2	NM_004595|SMS|6611|spermine synthase	AD001528|SMS|6611|spermine synthase	AK293455|SMS|6611|spermine synthase	AK313834|SMS|6611|spermine synthase	BC009898|SMS|6611|spermine synthase	BC085621|SMS|6611|spermine synthase	EU176347|SMS|6611|spermine synthase
hg19_v1_chrX_-_114252132_114252216	0.101431	SOX2.p2	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2	GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2	U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2	NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2	Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2	AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2
hg19_v1_chr2_+_208394615_208394671	0.101243	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr2_-_55277592_55277614	0.101237	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg19_v1_chr9_+_133710641_133710694	0.101154	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v1_chr15_+_22892683_22892695	0.101045	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr15_-_37390372_37390561	0.101021	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg19_v1_chr19_+_7580987_7581103	0.100678	SOX2.p2	NM_018083|ZNF358|140467|zinc finger protein 358
hg19_v1_chr3_-_114343052_114343052	0.100669	SOX2.p2	BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20
hg19_v1_chr16_-_1832576_1832608	0.100574	SOX2.p2	NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr6_+_39760772_39760865	0.100347	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg19_v1_chr20_+_44044706_44044803	0.100295	SOX2.p2	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T	AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T
hg19_v1_chr1_-_70671160_70671261	0.0997338	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg19_v1_chr10_+_180404_180423	0.099708	SOX2.p2	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg19_v1_chr22_+_23522551_23522690	0.0994284	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg19_v1_chr7_+_39663199_39663224	0.0991012	SOX2.p2	BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr2_-_24307179_24307212	0.0988925	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3
hg19_v1_chr14_+_54976545_54976677	0.0988276	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg19_v1_chr4_+_54243829_54243899	0.0985563	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr12_-_54653317_54653332	0.0977967	SOX2.p2	BC006821|CBX5|23468|chromobox homolog 5	NM_001127322|CBX5|23468|chromobox homolog 5
hg19_v1_chr7_-_14031049_14031049	0.097785	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg19_v1_chr7_-_115670774_115670798	0.0975974	SOX2.p2	D43945|TFEC|22797|transcription factor EC	BC029891|TFEC|22797|transcription factor EC
hg19_v1_chr5_+_140771482_140771482	0.0970285	SOX2.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg19_v1_chr11_+_747424_747427	0.0965874	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg19_v1_chr3_-_165555252_165555283	0.0964632	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg19_v1_chr10_-_14372807_14372894	0.0963769	SOX2.p2	AK289693|FRMD4A|55691|FERM domain containing 4A	NM_018027|FRMD4A|55691|FERM domain containing 4A	AB037715|FRMD4A|55691|FERM domain containing 4A	BC151244|FRMD4A|55691|FERM domain containing 4A
hg19_v1_chr15_-_93277303_93277475	0.0963584	SOX2.p2	BC110328|FAM174B|400451|family with sequence similarity 174, member B
hg19_v1_chr3_+_138067969_138067969	0.0961257	SOX2.p2	NM_001252090|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr13_-_36944289_36944316	0.0959914	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr5_-_150537306_150537333	0.0958438	SOX2.p2	AK126836|ANXA6|309|annexin A6	AK290672|ANXA6|309|annexin A6	AK130077|ANXA6|309|annexin A6	Y00097|ANXA6|309|annexin A6	AK298582|ANXA6|309|annexin A6
hg19_v1_chr16_-_1832571_1832575	0.0957674	SOX2.p2	AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr2_-_44586854_44586887	0.0957664	SOX2.p2	BC143061|PREPL|9581|prolyl endopeptidase-like	BC143062|PREPL|9581|prolyl endopeptidase-like	DQ023506|PREPL|9581|prolyl endopeptidase-like	DQ023507|PREPL|9581|prolyl endopeptidase-like	NM_001042385|PREPL|9581|prolyl endopeptidase-like	NM_001042386|PREPL|9581|prolyl endopeptidase-like
hg19_v1_chr2_-_55276288_55276333	0.0957272	SOX2.p2	AK302741|RTN4|57142|reticulon 4	AF333336|RTN4|57142|reticulon 4	NM_207521|RTN4|57142|reticulon 4	AY123248|RTN4|57142|reticulon 4
hg19_v1_chr20_+_42086468_42086516	0.0956426	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg19_v1_chr1_+_6684924_6684924	0.0954398	SOX2.p2	BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3	NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3
hg19_v1_chr14_+_55168831_55168947	0.0953515	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg19_v1_chr1_-_173020011_173020102	0.0950281	SOX2.p2	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18	NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18
hg19_v1_chr7_-_148581403_148581449	0.0948663	SOX2.p2	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr4_-_57522469_57522687	0.0947498	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg19_v1_chr15_-_99789585_99789827	0.0946742	SOX2.p2	BC015728|TTC23|64927|tetratricopeptide repeat domain 23	AF411456|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23	NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23	NM_022905|TTC23|64927|tetratricopeptide repeat domain 23
hg19_v1_chr2_+_54785453_54785678	0.0945033	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg19_v1_chr8_+_21777165_21777214	0.0944246	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg19_v1_chr6_-_152957985_152958100	0.0943318	SOX2.p2	AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg19_v1_chr7_+_44788175_44788190	0.0943189	SOX2.p2	BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr11_+_71791376_71791376	0.0940899	SOX2.p2	NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing	NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing
hg19_v1_chr6_-_31981049_31981049	0.0940035	SOX2.p2	NM_032470|TNXB|7148|tenascin XB	U24488|TNXB|7148|tenascin XB
hg19_v1_chr2_-_55277459_55277586	0.0938292	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg19_v1_chr7_+_55433396_55433748	0.0937416	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v1_chr5_+_140810126_140810168	0.0931491	SOX2.p2	NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12	NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12
hg19_v1_chr15_+_22892714_22892719	0.0928932	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr15_+_22892723_22892751	0.0928449	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr17_-_62658175_62658190	0.0926438	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr16_-_19533285_19533468	0.0922818	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg19_v1_chr17_-_47755340_47755524	0.0922322	SOX2.p2	BC003385|SPOP|8405|speckle-type POZ protein	AK222589|SPOP|8405|speckle-type POZ protein	AK312691|SPOP|8405|speckle-type POZ protein	AJ000644|SPOP|8405|speckle-type POZ protein	AK303268|SPOP|8405|speckle-type POZ protein	AK316366|SPOP|8405|speckle-type POZ protein	BC001269|SPOP|8405|speckle-type POZ protein	AK293587|SPOP|8405|speckle-type POZ protein	AK300616|SPOP|8405|speckle-type POZ protein	NM_001007226|SPOP|8405|speckle-type POZ protein	NM_001007227|SPOP|8405|speckle-type POZ protein	NM_001007228|SPOP|8405|speckle-type POZ protein	NM_001007229|SPOP|8405|speckle-type POZ protein	NM_001007230|SPOP|8405|speckle-type POZ protein	NM_003563|SPOP|8405|speckle-type POZ protein
hg19_v1_chrX_+_10124984_10125125	0.0919681	SOX2.p2	NM_001830|CLCN4|1183|chloride channel 4	AK225287|CLCN4|1183|chloride channel 4	X77197|CLCN4|1183|chloride channel 4	AK289564|CLCN4|1183|chloride channel 4	BC130278|CLCN4|1183|chloride channel 4
hg19_v1_chr10_+_99079017_99079097	0.0918828	SOX2.p2	NM_005479|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AK307245|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	U58975|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	BC034476|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas	AB074890|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas
hg19_v1_chr14_-_73925214_73925251	0.0918776	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr3_+_136537860_136537979	0.0911996	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22
hg19_v1_chr3_-_167191808_167191833	0.0911626	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v1_chr15_-_56209305_56209328	0.0911001	SOX2.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg19_v1_chr13_+_111855406_111855439	0.0910177	SOX2.p2	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v1_chr7_-_27183225_27183286	0.0904738	SOX2.p2	BT009744|HOXA5|3202|homeobox A5	CR542256|HOXA5|3202|homeobox A5	CR542277|HOXA5|3202|homeobox A5	DQ890593|HOXA5|3202|homeobox A5	DQ893761|HOXA5|3202|homeobox A5	BC013682|HOXA5|3202|homeobox A5	NM_019102|HOXA5|3202|homeobox A5
hg19_v1_chr10_-_98325100_98325183	0.0899686	SOX2.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg19_v1_chr1_-_168698412_168698447	0.0899363	SOX2.p2	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg19_v1_chr7_+_39663140_39663193	0.0896533	SOX2.p2	NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)
hg19_v1_chr2_+_109204745_109204767	0.0896092	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr1_-_154164551_154164608	0.0892792	SOX2.p2	X04201|TPM3|7170|tropomyosin 3	BC062740|TPM3|7170|tropomyosin 3	AK092690|TPM3|7170|tropomyosin 3	BC008407|TPM3|7170|tropomyosin 3	BC008425|TPM3|7170|tropomyosin 3	AK056997|TPM3|7170|tropomyosin 3	NM_152263|TPM3|7170|tropomyosin 3
hg19_v1_chr11_+_747428_747440	0.089112	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg19_v1_chr4_+_170581212_170581298	0.089111	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3	NM_001243374|CLCN3|1182|chloride channel 3
hg19_v1_chr5_-_136834887_136835074	0.0888393	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v1_chr11_-_111782447_111782539	0.0887259	SOX2.p2	BT006770|CRYAB|1410|crystallin, alpha B	FJ876064|CRYAB|1410|crystallin, alpha B	AM392549|CRYAB|1410|crystallin, alpha B	AM393027|CRYAB|1410|crystallin, alpha B	DQ892517|CRYAB|1410|crystallin, alpha B	DQ895729|CRYAB|1410|crystallin, alpha B	AF007162|CRYAB|1410|crystallin, alpha B	NM_001885|CRYAB|1410|crystallin, alpha B	S45630|CRYAB|1410|crystallin, alpha B	AK314029|CRYAB|1410|crystallin, alpha B	BC007008|CRYAB|1410|crystallin, alpha B	AK295498|CRYAB|1410|crystallin, alpha B
hg19_v1_chr1_-_203155813_203155825	0.0885881	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr7_+_150688143_150688191	0.0881069	SOX2.p2	NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)
hg19_v1_chr2_+_109384601_109384766	0.0880584	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg19_v1_chr10_+_123923104_123923358	0.0876983	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr10_-_17171789_17171878	0.0875986	SOX2.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg19_v1_chr10_-_13749622_13749756	0.0875805	SOX2.p2	AK057828|FRMD4A|55691|FERM domain containing 4A
hg19_v1_chr6_-_79944324_79944392	0.0874432	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr14_+_23340955_23341087	0.0874163	SOX2.p2	NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10	AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10	BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10
hg19_v1_chr13_-_53422773_53422778	0.0873464	SOX2.p2	AF061573|PCDH8|5100|protocadherin 8	AK293747|PCDH8|5100|protocadherin 8	AK297652|PCDH8|5100|protocadherin 8	BC036025|PCDH8|5100|protocadherin 8	NM_002590|PCDH8|5100|protocadherin 8	NM_032949|PCDH8|5100|protocadherin 8
hg19_v1_chrX_+_70521627_70521654	0.087231	SOX2.p2	AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2	AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2
hg19_v1_chr11_-_5706186_5706341	0.0868329	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg19_v1_chr7_-_76829109_76829164	0.0866147	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg19_v1_chr10_+_70748476_70748594	0.0860215	SOX2.p2	NM_015634|KIAA1279|26128|KIAA1279	AB033105|KIAA1279|26128|KIAA1279	BC006427|KIAA1279|26128|KIAA1279	AK291343|KIAA1279|26128|KIAA1279	BC012180|KIAA1279|26128|KIAA1279
hg19_v1_chr19_+_18496966_18496999	0.0857803	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg19_v1_chr7_-_99698278_99698385	0.0857692	SOX2.p2	AK055379|MCM7|4176|minichromosome maintenance complex component 7	NM_182776|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr1_+_185014449_185014558	0.0857576	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2
hg19_v1_chr20_+_6748744_6748744	0.0856896	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg19_v1_chr3_+_184033936_184033978	0.0852329	SOX2.p2	AF002816|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF104913|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK294567|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr3_-_55521330_55521334	0.0849901	SOX2.p2	BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A	NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A	AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr20_+_31823801_31823824	0.084945	SOX2.p2	AF417256|BPIFA1|51297|BPI fold containing family A, member 1	AF417257|BPIFA1|51297|BPI fold containing family A, member 1	BC012549|BPIFA1|51297|BPI fold containing family A, member 1	NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1	NM_016583|BPIFA1|51297|BPI fold containing family A, member 1	NM_130852|BPIFA1|51297|BPI fold containing family A, member 1	AK292778|BPIFA1|51297|BPI fold containing family A, member 1	AY359020|BPIFA1|51297|BPI fold containing family A, member 1	AB024937|BPIFA1|51297|BPI fold containing family A, member 1	AF158745|BPIFA1|51297|BPI fold containing family A, member 1	AF439448|BPIFA1|51297|BPI fold containing family A, member 1	AF172993|BPIFA1|51297|BPI fold containing family A, member 1
hg19_v1_chr7_-_107880492_107880613	0.0845996	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg19_v1_chr5_-_100238870_100238987	0.0841498	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v1_chr17_-_38978824_38978870	0.084084	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg19_v1_chr15_-_83240499_83240572	0.0839955	SOX2.p2	BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1
hg19_v1_chr9_+_90112754_90112983	0.0839741	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr6_-_131321868_131321906	0.0836361	SOX2.p2	CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg19_v1_chr12_-_16759531_16759536	0.0834195	SOX2.p2	NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr12_-_21810754_21810766	0.0829922	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr4_-_2263706_2263798	0.0827473	SOX2.p2	BT019969|MXD4|10608|MAX dimerization protein 4	BT019970|MXD4|10608|MAX dimerization protein 4	AF040963|MXD4|10608|MAX dimerization protein 4	AF082740|MXD4|10608|MAX dimerization protein 4	NM_006454|MXD4|10608|MAX dimerization protein 4	BC068060|MXD4|10608|MAX dimerization protein 4
hg19_v1_chr15_-_37392358_37392755	0.0827132	SOX2.p2	AK056216|MEIS2|4212|Meis homeobox 2	NM_170674|MEIS2|4212|Meis homeobox 2	NM_170675|MEIS2|4212|Meis homeobox 2	NM_170676|MEIS2|4212|Meis homeobox 2	NM_170677|MEIS2|4212|Meis homeobox 2
hg19_v1_chr17_+_8213555_8213600	0.0825423	SOX2.p2	NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15	BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15
hg19_v1_chr1_+_156052330_156052417	0.0824638	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg19_v1_chr17_+_7486964_7486964	0.082382	SOX2.p2	NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr5_+_113698015_113698084	0.0822132	SOX2.p2	AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
hg19_v1_chr3_+_136649316_136649358	0.0821348	SOX2.p2	NM_001190796|NCK1|4690|NCK adaptor protein 1	AK301460|NCK1|4690|NCK adaptor protein 1
hg19_v1_chr3_+_129159138_129159138	0.0819611	SOX2.p2	BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr22_+_23522699_23522728	0.0814549	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg19_v1_chr9_-_124989755_124989864	0.0813244	SOX2.p2	AM392697|LHX6|26468|LIM homeobox 6	AM393362|LHX6|26468|LIM homeobox 6	EU446700|LHX6|26468|LIM homeobox 6	AB031041|LHX6|26468|LIM homeobox 6	AB031042|LHX6|26468|LIM homeobox 6	AK313808|LHX6|26468|LIM homeobox 6	AK289827|LHX6|26468|LIM homeobox 6	NM_001242334|LHX6|26468|LIM homeobox 6
hg19_v1_chr4_-_165304406_165304406	0.0810182	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg19_v1_chr3_-_25705719_25706231	0.0808962	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg19_v1_chrX_+_119737743_119737834	0.0807846	SOX2.p2	NM_014060|MCTS1|28985|malignant T cell amplified sequence 1	AK311993|MCTS1|28985|malignant T cell amplified sequence 1	AB034206|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr4_+_113970784_113970884	0.0805528	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg19_v1_chr1_-_151118932_151119163	0.0804295	SOX2.p2	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v1_chr1_-_179833581_179833588	0.0801597	SOX2.p2	
hg19_v1_chr3_+_129159150_129159175	0.0799537	SOX2.p2	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr4_-_40936640_40936716	0.0799116	SOX2.p2	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr12_-_10588543_10588615	0.0796744	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg19_v1_chr1_+_33116748_33116958	0.0796248	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg19_v1_chr5_+_176562084_176562141	0.0795252	SOX2.p2	AF322907|NSD1|64324|nuclear receptor binding SET domain protein 1	AY049721|NSD1|64324|nuclear receptor binding SET domain protein 1	BC144629|NSD1|64324|nuclear receptor binding SET domain protein 1	BC150628|NSD1|64324|nuclear receptor binding SET domain protein 1	BC139789|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr7_-_14029641_14029641	0.0794907	SOX2.p2	NM_001163147|ETV1|2115|ets variant 1	NM_004956|ETV1|2115|ets variant 1
hg19_v1_chr6_-_11232883_11232899	0.079322	SOX2.p2	U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr15_+_22892699_22892708	0.0792963	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chr15_+_84115979_84116141	0.0792941	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chr13_-_31039966_31040021	0.0792801	SOX2.p2	X12597|HMGB1|3146|high mobility group box 1	D63874|HMGB1|3146|high mobility group box 1	AB208998|HMGB1|3146|high mobility group box 1	BC141844|HMGB1|3146|high mobility group box 1	BC003378|HMGB1|3146|high mobility group box 1	BC066889|HMGB1|3146|high mobility group box 1	BC030981|HMGB1|3146|high mobility group box 1	BC067732|HMGB1|3146|high mobility group box 1
hg19_v1_chr11_-_64647136_64647186	0.0792493	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg19_v1_chr11_-_102401430_102401489	0.0791851	SOX2.p2	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)	AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v1_chr12_-_21810720_21810732	0.0791802	SOX2.p2	BC071860|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr3_+_129159075_129159087	0.0791723	SOX2.p2	AK124140|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK293852|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	AK023000|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC003045|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)	BC004238|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr10_+_69644708_69644876	0.0791097	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg19_v1_chr11_+_16760147_16760173	0.0790332	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg19_v1_chr22_-_31688329_31688519	0.0788711	SOX2.p2	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1
hg19_v1_chr11_+_77532159_77532248	0.0787456	SOX2.p2	AF092136|C11orf67|28971|chromosome 11 open reading frame 67	AK024688|C11orf67|28971|chromosome 11 open reading frame 67	BC002752|C11orf67|28971|chromosome 11 open reading frame 67	NM_024684|C11orf67|28971|chromosome 11 open reading frame 67
hg19_v1_chr4_-_100242487_100242571	0.0785884	SOX2.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide	NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v1_chr4_-_83350548_83350618	0.0785495	SOX2.p2	AK294683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	D89092|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr3_+_123813527_123813684	0.0785397	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg19_v1_chrX_-_77041486_77041576	0.078497	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg19_v1_chr4_-_24586178_24586200	0.0783221	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr19_+_13134782_13134827	0.0782632	SOX2.p2	AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr5_-_150537261_150537302	0.0782211	SOX2.p2	J03578|ANXA6|309|annexin A6	BC017046|ANXA6|309|annexin A6
hg19_v1_chr11_+_118215058_118215111	0.0779745	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg19_v1_chr6_-_79944397_79944454	0.0779512	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg19_v1_chr12_-_69357019_69357020	0.0778395	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg19_v1_chr5_+_170846659_170846666	0.0778173	SOX2.p2	AY358811|FGF18|8817|fibroblast growth factor 18	AF075292|FGF18|8817|fibroblast growth factor 18	NM_003862|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr19_+_13135368_13135427	0.0777876	SOX2.p2	BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr11_+_114271372_114271432	0.0775524	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7
hg19_v1_chrX_-_64196268_64196430	0.077547	SOX2.p2	AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing	AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing	AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing	AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing	AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing	AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing	BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing	AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing	NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing
hg19_v1_chr7_+_142960502_142960586	0.0773887	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr3_-_55521567_55521669	0.0772857	SOX2.p2	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A
hg19_v1_chr4_+_72102249_72102324	0.0770847	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr4_+_175839508_175839558	0.0770834	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg19_v1_chr21_-_40721010_40721050	0.0770679	SOX2.p2	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1	BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr11_-_71823737_71823825	0.0768571	SOX2.p2	AK311146|C11orf51|25906|chromosome 11 open reading frame 51	AK222622|C11orf51|25906|chromosome 11 open reading frame 51	BC005156|C11orf51|25906|chromosome 11 open reading frame 51	BC005393|C11orf51|25906|chromosome 11 open reading frame 51	AF077206|C11orf51|25906|chromosome 11 open reading frame 51	NM_014042|C11orf51|25906|chromosome 11 open reading frame 51	AL080071|C11orf51|25906|chromosome 11 open reading frame 51
hg19_v1_chr12_+_100661203_100661548	0.0766611	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg19_v1_chr1_-_169336999_169337185	0.0766577	SOX2.p2	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg19_v1_chr3_-_15839674_15839690	0.076443	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg19_v1_chr17_+_77030471_77030574	0.0763123	SOX2.p2	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1
hg19_v1_chr7_+_116502529_116502585	0.0762885	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chrX_+_135579670_135579843	0.076272	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr12_-_21810733_21810752	0.0762605	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr7_+_99699129_99699488	0.0757677	SOX2.p2	NM_004722|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF020796|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	Y08387|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC018705|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AF155158|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK304489|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BC012023|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK315782|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK296651|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	AK293590|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit	BX640759|AP4M1|9179|adaptor-related protein complex 4, mu 1 subunit
hg19_v1_chr3_+_129159089_129159136	0.0753955	SOX2.p2	AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v1_chr5_+_92918924_92919042	0.0753024	SOX2.p2	BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr2_+_208394823_208394828	0.0752673	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg19_v1_chr7_+_116502597_116502668	0.0752135	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v1_chr1_-_235490801_235490801	0.0748884	SOX2.p2	AB210032|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_001206794|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg19_v1_chr1_-_54871681_54871895	0.074888	SOX2.p2	AK289474|SSBP3|23648|single stranded DNA binding protein 3	BC003605|SSBP3|23648|single stranded DNA binding protein 3	BC066365|SSBP3|23648|single stranded DNA binding protein 3	AF500116|SSBP3|23648|single stranded DNA binding protein 3
hg19_v1_chr14_-_75600111_75600130	0.0747415	SOX2.p2	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v1_chr2_+_217498082_217498190	0.0746062	SOX2.p2	NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa	M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa
hg19_v1_chr14_+_90863302_90863345	0.074482	SOX2.p2	NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr7_-_14029286_14029323	0.0744405	SOX2.p2	AB209202|ETV1|2115|ets variant 1	BC098403|ETV1|2115|ets variant 1	AK312863|ETV1|2115|ets variant 1
hg19_v1_chr4_+_54243909_54244009	0.0743583	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr17_+_57642885_57643089	0.0743315	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v1_chr1_-_208417635_208417664	0.0741451	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg19_v1_chr1_+_78444922_78445023	0.0740907	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v1_chr12_+_57943843_57944051	0.0740297	SOX2.p2	BC146670|KIF5A|3798|kinesin family member 5A	BC150208|KIF5A|3798|kinesin family member 5A	NM_004984|KIF5A|3798|kinesin family member 5A	U06698|KIF5A|3798|kinesin family member 5A	AB210045|KIF5A|3798|kinesin family member 5A
hg19_v1_chr4_+_72204769_72204965	0.0739813	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg19_v1_chr6_+_148663728_148663798	0.0736234	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chr19_+_3572903_3572949	0.0734703	SOX2.p2	NM_006339|HMG20B|10362|high mobility group 20B
hg19_v1_chr1_+_151129104_151129157	0.0734407	SOX2.p2	NM_001204848|TNFAIP8L2-SCNM1|100534012|TNFAIP8L2-SCNM1 readthrough	NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2	BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2
hg19_v1_chr14_-_105531764_105531783	0.0733612	SOX2.p2	AB465599|GPR132|29933|G protein-coupled receptor 132	AB465600|GPR132|29933|G protein-coupled receptor 132	AK292142|GPR132|29933|G protein-coupled receptor 132	AK303654|GPR132|29933|G protein-coupled receptor 132	AX775935|GPR132|29933|G protein-coupled receptor 132	AX775841|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr7_+_44795786_44795848	0.0733049	SOX2.p2	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2	BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2	AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2
hg19_v1_chr1_+_173684061_173684131	0.0733018	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr9_+_15422875_15422949	0.0731664	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr12_-_54653369_54653373	0.073156	SOX2.p2	NM_001127321|CBX5|23468|chromobox homolog 5
hg19_v1_chr8_-_42698447_42698475	0.0729398	SOX2.p2	AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1	BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1	AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1	NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1
hg19_v1_chr5_-_147162264_147162347	0.0729305	SOX2.p2	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg19_v1_chr17_+_61678218_61678247	0.0727343	SOX2.p2	AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I	BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr6_-_33771756_33771792	0.0725774	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg19_v1_chr7_-_8301767_8301815	0.0724616	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr3_+_19988530_19988849	0.0724417	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg19_v1_chr19_-_12780206_12780249	0.0723399	SOX2.p2	BC001192|WDR83OS|51398|WD repeat domain 83 opposite strand	AK311944|WDR83OS|51398|WD repeat domain 83 opposite strand	AF059620|WDR83OS|51398|WD repeat domain 83 opposite strand	BC042919|WDR83OS|51398|WD repeat domain 83 opposite strand	BC061912|WDR83OS|51398|WD repeat domain 83 opposite strand
hg19_v1_chr17_+_67498391_67498569	0.0723361	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr15_+_71433787_71433833	0.0722687	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg19_v1_chr19_+_3572950_3572957	0.0720738	SOX2.p2	BC002552|HMG20B|10362|high mobility group 20B	AK289500|HMG20B|10362|high mobility group 20B	BC003505|HMG20B|10362|high mobility group 20B
hg19_v1_chr12_+_6898705_6898790	0.0720349	SOX2.p2	AK300052|CD4|920|CD4 molecule	AK308344|CD4|920|CD4 molecule	BC025782|CD4|920|CD4 molecule
hg19_v1_chr10_+_122610853_122610937	0.0720168	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg19_v1_chr10_-_75410778_75410799	0.0720063	SOX2.p2	BC142635|SYNPO2L|79933|synaptopodin 2-like	BC131776|SYNPO2L|79933|synaptopodin 2-like	AK022983|SYNPO2L|79933|synaptopodin 2-like	NM_024875|SYNPO2L|79933|synaptopodin 2-like
hg19_v1_chr9_-_77503009_77503009	0.0718078	SOX2.p2	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chrX_+_101854095_101854275	0.0717059	SOX2.p2	AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5	BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5	NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough
hg19_v1_chr3_+_35721115_35721278	0.0716459	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg19_v1_chr6_+_43597278_43597278	0.0716105	SOX2.p2	NM_001003690|MAD2L1BP|9587|MAD2L1 binding protein
hg19_v1_chr2_-_128439359_128439359	0.0715962	SOX2.p2	NM_001161404|LIMS2|55679|LIM and senescent cell antigen-like domains 2
hg19_v1_chr5_+_137673223_137673286	0.0713506	SOX2.p2	NM_001135647|FAM53C|51307|family with sequence similarity 53, member C	BC052993|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr1_+_153606550_153606574	0.0711913	SOX2.p2	AF318362|CHTOP|26097|chromatin target of PRMT1	AK095230|CHTOP|26097|chromatin target of PRMT1	AK308713|CHTOP|26097|chromatin target of PRMT1	AK309844|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr4_-_75719686_75719881	0.0711878	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg19_v1_chr10_+_69644938_69644960	0.0710262	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg19_v1_chr10_+_35416089_35416182	0.0709534	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg19_v1_chr7_-_148581377_148581378	0.0708104	SOX2.p2	AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr8_+_18027970_18027970	0.0706459	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg19_v1_chr11_+_89392464_89392464	0.070634	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg19_v1_chr13_+_32605436_32605446	0.0705102	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg19_v1_chr4_-_157892054_157892380	0.0703075	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg19_v1_chr6_+_26251826_26251878	0.0701629	SOX2.p2	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh	BC096116|HIST1H2BH|8345|histone cluster 1, H2bh	BC096117|HIST1H2BH|8345|histone cluster 1, H2bh	BC096118|HIST1H2BH|8345|histone cluster 1, H2bh	BC096119|HIST1H2BH|8345|histone cluster 1, H2bh	NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh
hg19_v1_chr17_-_62658311_62658419	0.0699862	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg19_v1_chr1_-_203155745_203155810	0.0699722	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v1_chr13_+_98795710_98795727	0.0699131	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr6_+_148663953_148664027	0.0698016	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg19_v1_chrX_-_137821514_137821514	0.0697306	SOX2.p2	AF100144|FGF13|2258|fibroblast growth factor 13	NM_033642|FGF13|2258|fibroblast growth factor 13
hg19_v1_chr18_+_43304091_43304117	0.0696174	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v1_chr4_+_26322647_26322717	0.0695415	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg19_v1_chr4_-_57547845_57547871	0.069496	SOX2.p2	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg19_v1_chr4_-_24586176_24586177	0.0694714	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg19_v1_chr21_-_47705235_47705275	0.0694279	SOX2.p2	AJ010089|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	NM_003906|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104958|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein	BC104960|MCM3AP|8888|minichromosome maintenance complex component 3 associated protein
hg19_v1_chr12_+_69004684_69004706	0.0692856	SOX2.p2	AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family	BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family	AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family	AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family	AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family	AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family
hg19_v1_chr6_+_129204285_129204341	0.0690682	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg19_v1_chr13_+_98795468_98795504	0.069031	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v1_chr3_+_187871473_187871797	0.0689866	SOX2.p2	NM_001167672|LPP|4026|LIM domain containing preferred translocation partner in lipoma	AK304035|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr5_-_16738346_16738495	0.0688758	SOX2.p2	AK295736|MYO10|4651|myosin X
hg19_v1_chr1_-_40367539_40367686	0.0684358	SOX2.p2	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)
hg19_v1_chr2_-_152590983_152591000	0.0682992	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg19_v1_chr7_+_28452143_28452143	0.0682973	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr6_+_28092386_28092412	0.06829	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg19_v1_chr1_-_21503352_21503388	0.0682674	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr12_+_94071150_94071217	0.0681707	SOX2.p2	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain	U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v1_chr1_-_115269672_115269687	0.0681335	SOX2.p2	AK130392|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr14_-_88459469_88459650	0.0679501	SOX2.p2	D25283|GALC|2581|galactosylceramidase	D25284|GALC|2581|galactosylceramidase	AK296530|GALC|2581|galactosylceramidase	L23116|GALC|2581|galactosylceramidase	AK294040|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001201401|GALC|2581|galactosylceramidase
hg19_v1_chr6_-_84140854_84140954	0.0678383	SOX2.p2	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr1_+_203096835_203096860	0.067799	SOX2.p2	AK289928|ADORA1|134|adenosine A1 receptor	NM_000674|ADORA1|134|adenosine A1 receptor	NM_001048230|ADORA1|134|adenosine A1 receptor	AK095060|ADORA1|134|adenosine A1 receptor	BC026340|ADORA1|134|adenosine A1 receptor
hg19_v1_chr7_+_80267922_80267965	0.0677181	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr2_+_102927961_102928022	0.0673805	SOX2.p2	AB012701|IL1RL1|9173|interleukin 1 receptor-like 1	NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1	AK313967|IL18R1|8809|interleukin 18 receptor 1	AK303389|IL1RL1|9173|interleukin 1 receptor-like 1
hg19_v1_chr8_+_21777216_21777281	0.0673613	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg19_v1_chrX_+_9432980_9433489	0.066992	SOX2.p2	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked	BC052304|TBL1X|6907|transducin (beta)-like 1X-linked	NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked
hg19_v1_chr1_-_43919547_43919659	0.0668974	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg19_v1_chr14_-_55650348_55650465	0.0668522	SOX2.p2	BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5
hg19_v1_chr18_+_657461_657632	0.066852	SOX2.p2	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg19_v1_chr17_+_7487153_7487180	0.0668288	SOX2.p2	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1	AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1	AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1	DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1
hg19_v1_chr13_+_97794050_97794115	0.0667796	SOX2.p2	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)
hg19_v1_chr3_-_116164321_116164341	0.0666652	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr7_+_143412938_143412962	0.0666438	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg19_v1_chr4_-_85887543_85887543	0.0663754	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg19_v1_chr2_+_44502596_44502674	0.0661558	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg19_v1_chr19_+_3572958_3572999	0.0661082	SOX2.p2	AK314201|HMG20B|10362|high mobility group 20B	AK090733|HMG20B|10362|high mobility group 20B	AK310601|HMG20B|10362|high mobility group 20B	AF318366|HMG20B|10362|high mobility group 20B
hg19_v1_chr4_+_123747815_123747873	0.0660754	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg19_v1_chr6_+_97010423_97010516	0.0658133	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg19_v1_chr1_+_25664785_25664884	0.0656675	SOX2.p2	NM_014313|TMEM50A|23585|transmembrane protein 50A	AK311092|TMEM50A|23585|transmembrane protein 50A	AF087880|TMEM50A|23585|transmembrane protein 50A	AL136627|TMEM50A|23585|transmembrane protein 50A	AK299180|TMEM50A|23585|transmembrane protein 50A	AK311355|TMEM50A|23585|transmembrane protein 50A	AK312588|TMEM50A|23585|transmembrane protein 50A	AY358650|TMEM50A|23585|transmembrane protein 50A	AY071927|TMEM50A|23585|transmembrane protein 50A	BC007341|TMEM50A|23585|transmembrane protein 50A	BC066908|TMEM50A|23585|transmembrane protein 50A	AF081282|TMEM50A|23585|transmembrane protein 50A
hg19_v1_chr14_-_89020888_89021498	0.0653087	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg19_v1_chr22_+_38599026_38599026	0.064836	SOX2.p2	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr16_+_127017_127017	0.0647388	SOX2.p2	NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase
hg19_v1_chr22_+_31366662_31366813	0.0647001	SOX2.p2	
hg19_v1_chr2_+_109204777_109204794	0.0644409	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg19_v1_chr4_-_149363498_149363671	0.0643621	SOX2.p2	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2
hg19_v1_chr16_-_46782104_46782220	0.0639923	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg19_v1_chr2_+_191273012_191273115	0.0639842	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chr8_-_121824268_121824272	0.0637611	SOX2.p2	BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v1_chr1_+_215256559_215256661	0.0636818	SOX2.p2	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr14_+_67656109_67656177	0.0636581	SOX2.p2	NM_173526|FAM71D|161142|family with sequence similarity 71, member D	AK093449|FAM71D|161142|family with sequence similarity 71, member D	AK302154|FAM71D|161142|family with sequence similarity 71, member D	BC037380|FAM71D|161142|family with sequence similarity 71, member D	BC050401|FAM71D|161142|family with sequence similarity 71, member D
hg19_v1_chr16_+_89988416_89988416	0.06363	SOX2.p2	AK292219|TUBB3|10381|tubulin, beta 3 class III	NM_001197181|TUBB3|10381|tubulin, beta 3 class III
hg19_v1_chr20_-_17511973_17512012	0.0635083	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg19_v1_chr4_-_120549115_120549238	0.0634789	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr13_+_42712177_42712244	0.0633327	SOX2.p2	AK302727|DGKH|160851|diacylglycerol kinase, eta	NM_001204505|DGKH|160851|diacylglycerol kinase, eta	NM_001204506|DGKH|160851|diacylglycerol kinase, eta	AK122909|DGKH|160851|diacylglycerol kinase, eta	AK302631|DGKH|160851|diacylglycerol kinase, eta	BC043292|DGKH|160851|diacylglycerol kinase, eta	BC044822|DGKH|160851|diacylglycerol kinase, eta
hg19_v1_chr12_+_20724797_20724797	0.0631951	SOX2.p2	AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited	NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited
hg19_v1_chr12_+_69633316_69633351	0.0631914	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr12_+_104458235_104458338	0.0630702	SOX2.p2	NM_013320|HCFC2|29915|host cell factor C2	AK313466|HCFC2|29915|host cell factor C2	AK223342|HCFC2|29915|host cell factor C2	BC006558|HCFC2|29915|host cell factor C2	AF117210|HCFC2|29915|host cell factor C2	BC033799|HCFC2|29915|host cell factor C2	EU446491|HCFC2|29915|host cell factor C2
hg19_v1_chr12_+_6898605_6898642	0.0630507	SOX2.p2	NM_000616|CD4|920|CD4 molecule	NM_001195014|CD4|920|CD4 molecule	NM_001195015|CD4|920|CD4 molecule	NM_001195016|CD4|920|CD4 molecule	NM_001195017|CD4|920|CD4 molecule
hg19_v1_chr13_+_53602829_53602995	0.0630051	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	HQ258281|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg19_v1_chr5_-_127873734_127873949	0.0629371	SOX2.p2	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2
hg19_v1_chr3_-_185641596_185641735	0.0629141	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr6_+_34204928_34204935	0.0629129	SOX2.p2	M23614|HMGA1|3159|high mobility group AT-hook 1	M23615|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr1_+_161129229_161129287	0.0627017	SOX2.p2	NM_001014443|USP21|27005|ubiquitin specific peptidase 21	NM_012475|USP21|27005|ubiquitin specific peptidase 21	AB208899|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr20_+_31367637_31367657	0.0626853	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v1_chr8_-_93107643_93107711	0.0626833	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v1_chr22_-_22089975_22090122	0.0624897	SOX2.p2	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)	BC074501|YPEL1|29799|yippee-like 1 (Drosophila)	BC048303|YPEL1|29799|yippee-like 1 (Drosophila)	NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)	AB098734|YPEL1|29799|yippee-like 1 (Drosophila)	AB098735|YPEL1|29799|yippee-like 1 (Drosophila)
hg19_v1_chr6_+_134274247_134274443	0.0622597	SOX2.p2	NM_004865|TBPL1|9519|TBP-like 1	AK313645|TBPL1|9519|TBP-like 1	BC000381|TBPL1|9519|TBP-like 1	AF136570|TBPL1|9519|TBP-like 1	AF130312|TBPL1|9519|TBP-like 1	AB020881|TBPL1|9519|TBP-like 1	BC017559|TBPL1|9519|TBP-like 1
hg19_v1_chr22_+_18632704_18632764	0.0622109	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr14_-_50999178_50999442	0.0617353	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v1_chr12_-_123706393_123706440	0.0615074	SOX2.p2	BC130440|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144016|MPHOSPH9|10198|M-phase phosphoprotein 9	BC144017|MPHOSPH9|10198|M-phase phosphoprotein 9	AK091181|MPHOSPH9|10198|M-phase phosphoprotein 9	NM_022782|MPHOSPH9|10198|M-phase phosphoprotein 9
hg19_v1_chr10_+_35484054_35484117	0.0614221	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg19_v1_chr10_-_13390189_13390345	0.0613436	SOX2.p2	U34044|SEPHS1|22929|selenophosphate synthetase 1	BC063816|SEPHS1|22929|selenophosphate synthetase 1	GU954545|SEPHS1|22929|selenophosphate synthetase 1	GU954546|SEPHS1|22929|selenophosphate synthetase 1	GU954547|SEPHS1|22929|selenophosphate synthetase 1	GU954548|SEPHS1|22929|selenophosphate synthetase 1	GU954549|SEPHS1|22929|selenophosphate synthetase 1	NM_001195602|SEPHS1|22929|selenophosphate synthetase 1	NM_001195604|SEPHS1|22929|selenophosphate synthetase 1	NM_012247|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr9_+_15422630_15422786	0.0613039	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr14_-_69354900_69354979	0.0612037	SOX2.p2	BX641076|ACTN1|87|actinin, alpha 1
hg19_v1_chr4_+_160188997_160188997	0.0610837	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v1_chr5_-_32388687_32388762	0.0608017	SOX2.p2	AK025481|ZFR|51663|zinc finger RNA binding protein
hg19_v1_chr11_+_114271294_114271368	0.0607453	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg19_v1_chr4_-_72649734_72650078	0.0607333	SOX2.p2	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)
hg19_v1_chr8_+_26435590_26435770	0.0607327	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2	AB370194|DPYSL2|1808|dihydropyrimidinase-like 2
hg19_v1_chr1_+_161129288_161129402	0.0606874	SOX2.p2	BC090946|USP21|27005|ubiquitin specific peptidase 21	AK292319|USP21|27005|ubiquitin specific peptidase 21	AK310326|USP21|27005|ubiquitin specific peptidase 21	AF233442|USP21|27005|ubiquitin specific peptidase 21	AF217979|USP21|27005|ubiquitin specific peptidase 21	AF177758|USP21|27005|ubiquitin specific peptidase 21
hg19_v1_chr1_-_115300615_115300670	0.0605432	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242891|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242892|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001242893|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg19_v1_chr15_+_72766689_72766744	0.0605366	SOX2.p2	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)	BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)
hg19_v1_chr5_+_177631534_177631610	0.0604538	SOX2.p2	AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B
hg19_v1_chr2_+_71295685_71295813	0.0603522	SOX2.p2	BC001029|NAGK|55577|N-acetylglucosamine kinase	BC005371|NAGK|55577|N-acetylglucosamine kinase	AK001812|NAGK|55577|N-acetylglucosamine kinase	AK097223|NAGK|55577|N-acetylglucosamine kinase	AK222645|NAGK|55577|N-acetylglucosamine kinase	BC036843|NAGK|55577|N-acetylglucosamine kinase	AJ242910|NAGK|55577|N-acetylglucosamine kinase	DQ892674|NAGK|55577|N-acetylglucosamine kinase	DQ895916|NAGK|55577|N-acetylglucosamine kinase	CR457271|NAGK|55577|N-acetylglucosamine kinase
hg19_v1_chr22_-_37172113_37172198	0.0602181	SOX2.p2	AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)
hg19_v1_chr4_-_120549827_120549980	0.0601889	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg19_v1_chr12_-_56679729_56679874	0.0601114	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg19_v1_chr4_+_55095433_55095495	0.06008	SOX2.p2	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide	BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide
hg19_v1_chr16_+_29086269_29086342	0.0598855	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg19_v1_chr3_+_187930720_187930720	0.0597258	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg19_v1_chr7_+_116593354_116593417	0.0596249	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg19_v1_chr17_-_10325266_10325266	0.0594958	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg19_v1_chr6_+_30688085_30688141	0.0594817	SOX2.p2	AK303227|TUBB|203068|tubulin, beta class I	BC020946|TUBB|203068|tubulin, beta class I	AK297638|TUBB|203068|tubulin, beta class I	AK098772|TUBB|203068|tubulin, beta class I	AK316265|TUBB|203068|tubulin, beta class I	BC103746|TUBB|203068|tubulin, beta class I	AF070600|TUBB|203068|tubulin, beta class I	AF141349|TUBB|203068|tubulin, beta class I	BC070326|TUBB|203068|tubulin, beta class I
hg19_v1_chr15_+_65822842_65823005	0.0594219	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr14_-_105531739_105531758	0.0593289	SOX2.p2	AF083955|GPR132|29933|G protein-coupled receptor 132	NM_013345|GPR132|29933|G protein-coupled receptor 132	EU543705|GPR132|29933|G protein-coupled receptor 132
hg19_v1_chr5_+_140767402_140767451	0.0592149	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg19_v1_chr1_-_201915467_201915680	0.0592085	SOX2.p2	AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)	BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)	X54162|LMOD1|25802|leiomodin 1 (smooth muscle)	AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)	BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)	AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)
hg19_v1_chr7_-_143599163_143599367	0.0591848	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A	NM_001206938|FAM115A|9747|family with sequence similarity 115, member A
hg19_v1_chr22_+_23522743_23522858	0.0591478	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg19_v1_chr1_-_224621714_224621807	0.0591347	SOX2.p2	AK307909|WDR26|80232|WD repeat domain 26	BC034498|WDR26|80232|WD repeat domain 26
hg19_v1_chr12_+_69004614_69004678	0.0586173	SOX2.p2	NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family	NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family
hg19_v1_chr3_+_43328001_43328137	0.0585581	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg19_v1_chr7_+_28725597_28725769	0.0585272	SOX2.p2	L05912|CREB5|9586|cAMP responsive element binding protein 5	AK300455|CREB5|9586|cAMP responsive element binding protein 5	BC059400|CREB5|9586|cAMP responsive element binding protein 5	NM_001011666|CREB5|9586|cAMP responsive element binding protein 5	AK316187|CREB5|9586|cAMP responsive element binding protein 5	AB209262|CREB5|9586|cAMP responsive element binding protein 5
hg19_v1_chr5_+_121647385_121647440	0.0585207	SOX2.p2	AK299687|SNCAIP|9627|synuclein, alpha interacting protein
hg19_v1_chr14_+_104029278_104029344	0.0585019	SOX2.p2	NM_032374|APOPT1|84334|apoptogenic 1	AK223092|APOPT1|84334|apoptogenic 1	AK223103|APOPT1|84334|apoptogenic 1	BC007412|APOPT1|84334|apoptogenic 1
hg19_v1_chr22_+_18632841_18632964	0.0583995	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg19_v1_chr2_-_37899227_37899552	0.0582182	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg19_v1_chr7_-_115670828_115670876	0.0581665	SOX2.p2	CR933605|TFEC|22797|transcription factor EC	NM_001018058|TFEC|22797|transcription factor EC	NM_012252|TFEC|22797|transcription factor EC
hg19_v1_chr2_-_110874142_110874142	0.0578216	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr17_+_26699093_26699125	0.0577813	SOX2.p2	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1	AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1	BC122860|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr19_+_11466173_11466218	0.0577133	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr1_-_21503304_21503344	0.0576867	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr17_-_34344933_34345004	0.0572807	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg19_v1_chr12_+_120933911_120933915	0.0572683	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr12_-_121734474_121734541	0.0570026	SOX2.p2	BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr17_+_28705922_28705957	0.056976	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg19_v1_chr7_-_148581379_148581383	0.0569623	SOX2.p2	AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr14_-_27066959_27067018	0.0565367	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg19_v1_chr7_+_120628722_120628808	0.0565088	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr8_-_86253863_86253942	0.0564231	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg19_v1_chr12_-_21810769_21810778	0.0562571	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg19_v1_chr19_+_11466061_11466170	0.0561828	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg19_v1_chr3_-_160283311_160283329	0.056182	SOX2.p2	BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr9_-_74525846_74526005	0.0561358	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg19_v1_chr4_-_55991746_55991763	0.0559495	SOX2.p2	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)	NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v1_chr2_-_39664291_39664311	0.0559074	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr21_-_35288027_35288157	0.0556856	SOX2.p2	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
hg19_v1_chr11_+_66278076_66278157	0.0555288	SOX2.p2	AK095638|BBS1|582|Bardet-Biedl syndrome 1	BX647612|BBS1|582|Bardet-Biedl syndrome 1	AK294962|BBS1|582|Bardet-Biedl syndrome 1	AK302657|BBS1|582|Bardet-Biedl syndrome 1	AK296311|BBS1|582|Bardet-Biedl syndrome 1	BC047642|BBS1|582|Bardet-Biedl syndrome 1	AF503941|BBS1|582|Bardet-Biedl syndrome 1	NM_024649|BBS1|582|Bardet-Biedl syndrome 1	BC109064|BBS1|582|Bardet-Biedl syndrome 1	BC109065|BBS1|582|Bardet-Biedl syndrome 1
hg19_v1_chr9_-_36400212_36400295	0.0554674	SOX2.p2	AL136817|RNF38|152006|ring finger protein 38	BC033786|RNF38|152006|ring finger protein 38	NM_022781|RNF38|152006|ring finger protein 38	NM_194329|RNF38|152006|ring finger protein 38
hg19_v1_chr12_-_7818467_7818501	0.0552823	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg19_v1_chr21_+_17102286_17102364	0.0552154	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr14_-_73925279_73925303	0.0551812	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg19_v1_chr17_-_1083008_1083130	0.0551455	SOX2.p2	AK302682|ABR|29|active BCR-related gene	NM_021962|ABR|29|active BCR-related gene	U01147|ABR|29|active BCR-related gene
hg19_v1_chr5_-_137514299_137514368	0.0545105	SOX2.p2	BC008039|BRD8|10902|bromodomain containing 8	BC008076|BRD8|10902|bromodomain containing 8	AB209079|BRD8|10902|bromodomain containing 8	AK310380|BRD8|10902|bromodomain containing 8	AK289951|BRD8|10902|bromodomain containing 8	AK293621|BRD8|10902|bromodomain containing 8	AK297756|BRD8|10902|bromodomain containing 8	AK312333|BRD8|10902|bromodomain containing 8	AK225928|BRD8|10902|bromodomain containing 8	AL136823|BRD8|10902|bromodomain containing 8	NM_001164326|BRD8|10902|bromodomain containing 8	NM_006696|BRD8|10902|bromodomain containing 8	NM_139199|BRD8|10902|bromodomain containing 8
hg19_v1_chr1_+_36348795_36348812	0.0544286	SOX2.p2	AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg19_v1_chr16_+_67906924_67906967	0.0543413	SOX2.p2	NM_014329|EDC4|23644|enhancer of mRNA decapping 4	AK128582|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr2_-_50574891_50574953	0.0542363	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg19_v1_chr5_+_138211084_138211099	0.0541647	SOX2.p2	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr21_-_46293598_46293608	0.0541392	SOX2.p2	BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein
hg19_v1_chr1_-_200377488_200377589	0.0540896	SOX2.p2	AK022921|ZNF281|23528|zinc finger protein 281
hg19_v1_chr6_-_132834165_132834336	0.0539406	SOX2.p2	U77942|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg19_v1_chr6_-_52860076_52860179	0.0538713	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg19_v1_chr15_-_50647604_50647604	0.0530695	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr7_-_44887567_44887589	0.0530457	SOX2.p2	AF081192|H2AFV|94239|H2A histone family, member V
hg19_v1_chr12_+_12869818_12870435	0.0530322	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v1_chr11_+_118889427_118889482	0.0529759	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr2_+_181845088_181845363	0.0528504	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr1_-_51787881_51787937	0.0527743	SOX2.p2	BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A	NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A
hg19_v1_chr2_-_178753464_178753465	0.0527531	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg19_v1_chr7_+_107301079_107301079	0.0526575	SOX2.p2	AF030880|SLC26A4|5172|solute carrier family 26, member 4	NM_000441|SLC26A4|5172|solute carrier family 26, member 4
hg19_v1_chr8_-_38325825_38326072	0.0525732	SOX2.p2	M34187|FGFR1|2260|fibroblast growth factor receptor 1	M34188|FGFR1|2260|fibroblast growth factor receptor 1	M34186|FGFR1|2260|fibroblast growth factor receptor 1
hg19_v1_chr17_+_68071386_68071475	0.0525082	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v1_chr12_-_50595303_50595315	0.052489	SOX2.p2	AK023649|LIMA1|51474|LIM domain and actin binding 1	AF157325|LIMA1|51474|LIM domain and actin binding 1	NM_001243775|LIMA1|51474|LIM domain and actin binding 1
hg19_v1_chr19_-_1111972_1112003	0.0524644	SOX2.p2	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)
hg19_v1_chr6_-_132939208_132939231	0.0523693	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg19_v1_chr15_+_84116172_84116285	0.0521751	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg19_v1_chrX_+_100354797_100354797	0.0520126	SOX2.p2	NM_006733|CENPI|2491|centromere protein I	X97249|CENPI|2491|centromere protein I
hg19_v1_chr21_+_47269874_47269903	0.0518885	SOX2.p2	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg19_v1_chr14_+_23305792_23305808	0.0515809	SOX2.p2	NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr7_-_128415843_128415843	0.0514542	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg19_v1_chr17_+_58677603_58677775	0.0514404	SOX2.p2	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v1_chr6_+_52285804_52285804	0.0513985	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg19_v1_chr3_-_149095458_149095486	0.0513697	SOX2.p2	AK130073|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr3_+_9773769_9773804	0.0513453	SOX2.p2	M91585|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr3_-_149095413_149095452	0.0511401	SOX2.p2	BC008442|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr4_+_124317884_124318029	0.0509169	SOX2.p2	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)	NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v1_chrX_-_15872882_15872891	0.0508898	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg19_v1_chr11_+_9596233_9596233	0.0508365	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg19_v1_chr5_-_134734915_134734927	0.0508082	SOX2.p2	AK023409|H2AFY|9555|H2A histone family, member Y	AK296014|H2AFY|9555|H2A histone family, member Y	NM_001040158|H2AFY|9555|H2A histone family, member Y	NM_138609|H2AFY|9555|H2A histone family, member Y	NM_138610|H2AFY|9555|H2A histone family, member Y
hg19_v1_chr18_-_21891469_21891469	0.0507525	SOX2.p2	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A
hg19_v1_chr14_+_23305816_23305857	0.0505324	SOX2.p2	BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr4_-_83347222_83347249	0.0504837	SOX2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr6_+_30688144_30688304	0.0504736	SOX2.p2	BC002347|TUBB|203068|tubulin, beta class I	BC007605|TUBB|203068|tubulin, beta class I	AB062393|TUBB|203068|tubulin, beta class I	BC001938|TUBB|203068|tubulin, beta class I	BC005838|TUBB|203068|tubulin, beta class I	AF070561|TUBB|203068|tubulin, beta class I	AF070593|TUBB|203068|tubulin, beta class I	BC013374|TUBB|203068|tubulin, beta class I	NM_178014|TUBB|203068|tubulin, beta class I	BC021909|TUBB|203068|tubulin, beta class I	BC019924|TUBB|203068|tubulin, beta class I	BC062532|TUBB|203068|tubulin, beta class I	AK297489|TUBB|203068|tubulin, beta class I	DQ891742|TUBB|203068|tubulin, beta class I	DQ891828|TUBB|203068|tubulin, beta class I	DQ894920|TUBB|203068|tubulin, beta class I	V00599|TUBB|203068|tubulin, beta class I
hg19_v1_chr7_+_80267972_80268035	0.0504422	SOX2.p2	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg19_v1_chr3_+_25469749_25469769	0.0503206	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta
hg19_v1_chr17_-_10372875_10372875	0.0501983	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg19_v1_chr7_-_124405680_124405913	0.0501876	SOX2.p2	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)	NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v1_chr12_-_111358353_111358403	0.0501409	SOX2.p2	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow
hg19_v1_chr18_+_657674_657748	0.0500646	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg19_v1_chr1_+_22303417_22303542	0.0500616	SOX2.p2	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B	M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B	AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A	M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B
hg19_v1_chr11_+_125496123_125496336	0.0499593	SOX2.p2	AK292549|CHEK1|1111|checkpoint kinase 1	NM_001274|CHEK1|1111|checkpoint kinase 1	BC017575|CHEK1|1111|checkpoint kinase 1
hg19_v1_chr1_-_168105620_168105623	0.0499474	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg19_v1_chr5_-_77844975_77845071	0.0497834	SOX2.p2	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr2_+_160569027_160569054	0.0496093	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr1_+_53480573_53480613	0.0495582	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg19_v1_chr11_-_65326129_65326252	0.0494728	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg19_v1_chr4_-_121993568_121993693	0.0494572	SOX2.p2	BC019351|NDNF|79625|neuron-derived neurotrophic factor	AK289615|NDNF|79625|neuron-derived neurotrophic factor	NM_024574|NDNF|79625|neuron-derived neurotrophic factor
hg19_v1_chr1_+_22328148_22328166	0.0494369	SOX2.p2	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A	D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A	NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A	AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A	BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A	DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A
hg19_v1_chr2_-_110873638_110873650	0.0494142	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr20_-_37063914_37064031	0.0493966	SOX2.p2	BC012894|LOC388796|388796|uncharacterized LOC388796	BC052370|LOC388796|388796|uncharacterized LOC388796	BC032119|LOC388796|388796|uncharacterized LOC388796	BX640887|LOC388796|388796|uncharacterized LOC388796
hg19_v1_chr1_+_182808481_182808540	0.0493836	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr1_-_224622000_224622000	0.0492231	SOX2.p2	AB209887|WDR26|80232|WD repeat domain 26	NM_001115113|WDR26|80232|WD repeat domain 26	NM_025160|WDR26|80232|WD repeat domain 26
hg19_v1_chr5_+_169010637_169010806	0.049042	SOX2.p2	NM_017785|CCDC99|54908|coiled-coil domain containing 99	AK304623|CCDC99|54908|coiled-coil domain containing 99	AF269167|CCDC99|54908|coiled-coil domain containing 99	AK310442|CCDC99|54908|coiled-coil domain containing 99	AK308835|CCDC99|54908|coiled-coil domain containing 99	BC012568|CCDC99|54908|coiled-coil domain containing 99	AY517557|CCDC99|54908|coiled-coil domain containing 99
hg19_v1_chr11_+_118889140_118889240	0.04904	SOX2.p2	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg19_v1_chr5_+_138089073_138089116	0.0490253	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr15_+_74218794_74218809	0.0490142	SOX2.p2	BC068542|LOXL1|4016|lysyl oxidase-like 1	AK303982|LOXL1|4016|lysyl oxidase-like 1	AK314222|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr3_+_169492051_169492289	0.0489571	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg19_v1_chr17_-_30669133_30669281	0.04894	SOX2.p2	AF052093|C17orf75|64149|chromosome 17 open reading frame 75	BC054035|C17orf75|64149|chromosome 17 open reading frame 75	BC047325|C17orf75|64149|chromosome 17 open reading frame 75	BC026017|C17orf75|64149|chromosome 17 open reading frame 75	BC035715|C17orf75|64149|chromosome 17 open reading frame 75	AF305686|C17orf75|64149|chromosome 17 open reading frame 75	NM_022344|C17orf75|64149|chromosome 17 open reading frame 75
hg19_v1_chr20_-_44006876_44007032	0.0488992	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg19_v1_chr12_+_56435685_56435721	0.0488609	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg19_v1_chr17_+_26698986_26699029	0.0488404	SOX2.p2	NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1
hg19_v1_chr21_-_27107959_27107983	0.0487929	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v1_chr6_+_3077031_3077098	0.0482978	SOX2.p2	BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1
hg19_v1_chr14_+_90863365_90863489	0.0481984	SOX2.p2	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)
hg19_v1_chr20_+_2844688_2844879	0.0481815	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v1_chr4_-_157892545_157892573	0.0480789	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg19_v1_chr18_+_77253324_77253436	0.0478316	SOX2.p2	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
hg19_v1_chr15_+_57210889_57210915	0.0477201	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg19_v1_chr17_+_65822206_65822229	0.0474992	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr1_-_225616556_225616556	0.0473855	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg19_v1_chr6_+_123109970_123109970	0.0473532	SOX2.p2	NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr9_-_32550818_32550908	0.0473077	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v1_chr1_+_153232178_153232178	0.0471376	SOX2.p2	BC108290|LOR|4014|loricrin	NM_000427|LOR|4014|loricrin
hg19_v1_chr14_-_88459459_88459468	0.0469733	SOX2.p2	DQ891232|GALC|2581|galactosylceramidase	DQ894416|GALC|2581|galactosylceramidase	BC036518|GALC|2581|galactosylceramidase
hg19_v1_chr9_-_132586440_132586534	0.0466962	SOX2.p2	NM_000113|TOR1A|1861|torsin family 1, member A (torsin A)	AK294677|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr7_-_44887620_44887654	0.0465545	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg19_v1_chr5_+_34656367_34656459	0.0464811	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg19_v1_chr1_-_101360405_101360417	0.0464311	SOX2.p2	NM_001033025|EXTL2|2135|exostoses (multiple)-like 2	NM_001439|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr19_+_41594367_41594376	0.046242	SOX2.p2	NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13	AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13
hg19_v1_chr3_-_125820390_125820399	0.0462336	SOX2.p2	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3	AK298070|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chrX_+_28605558_28605680	0.0462312	SOX2.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg19_v1_chr5_+_138089118_138089145	0.0460702	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v1_chr11_-_27723061_27723179	0.046034	SOX2.p2	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg19_v1_chr3_-_160283166_160283219	0.0460111	SOX2.p2	U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr12_-_80307690_80307690	0.0459879	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A
hg19_v1_chr5_+_137673956_137674010	0.0459622	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr15_+_80390757_80390757	0.0458892	SOX2.p2	NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr11_+_747449_747483	0.0457604	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg19_v1_chr9_+_15422862_15422874	0.0456347	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg19_v1_chr6_+_34857021_34857179	0.0456206	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v1_chr10_-_124605690_124605690	0.0455414	SOX2.p2	AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1	AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1	NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1
hg19_v1_chr11_+_57365577_57365767	0.0455174	SOX2.p2	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr15_+_74218786_74218792	0.0453177	SOX2.p2	NM_005576|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr16_-_22385596_22385995	0.0450546	SOX2.p2	DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa
hg19_v1_chr6_+_25963398_25963419	0.0450423	SOX2.p2	CR936707|TRIM38|10475|tripartite motif containing 38
hg19_v1_chrX_-_55057408_55057496	0.0449788	SOX2.p2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg19_v1_chr17_-_10421858_10421858	0.0449508	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg19_v1_chr9_-_132586363_132586397	0.0448751	SOX2.p2	BT006931|TOR1A|1861|torsin family 1, member A (torsin A)	DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)	DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)	BC014484|TOR1A|1861|torsin family 1, member A (torsin A)	AK314505|TOR1A|1861|torsin family 1, member A (torsin A)	AK075343|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr7_+_120628867_120628925	0.0448133	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg19_v1_chr14_+_37131064_37131105	0.0447427	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg19_v1_chr21_+_34398210_34398292	0.0446226	SOX2.p2	NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2	BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2	AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2
hg19_v1_chr17_-_20946088_20946457	0.0445048	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg19_v1_chr1_+_25757381_25757589	0.0444051	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg19_v1_chr18_+_657633_657663	0.0443601	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase
hg19_v1_chr16_-_3930685_3930711	0.0443545	SOX2.p2	U47741|CREBBP|1387|CREB binding protein
hg19_v1_chr17_+_25958192_25958215	0.0441998	SOX2.p2	AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg19_v1_chr2_+_181845368_181845372	0.0441001	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr1_-_49242406_49242589	0.0438623	SOX2.p2	BC011804|BEND5|79656|BEN domain containing 5	AK021650|BEND5|79656|BEN domain containing 5	NM_024603|BEND5|79656|BEN domain containing 5	BC007932|BEND5|79656|BEN domain containing 5
hg19_v1_chr1_+_209859524_209859524	0.0438292	SOX2.p2	NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1	NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v1_chr12_+_120933832_120933903	0.0437904	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr10_+_105727469_105727505	0.0437542	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg19_v1_chr15_+_65822738_65822840	0.0437212	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg19_v1_chr8_+_133787611_133787673	0.0436876	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg19_v1_chr11_-_1629614_1629692	0.0435687	SOX2.p2	AY597812|KRTAP5-3|387266|keratin associated protein 5-3	AB126072|KRTAP5-3|387266|keratin associated protein 5-3	NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3
hg19_v1_chr5_+_137673953_137673955	0.0434944	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr11_-_119234628_119234857	0.0434129	SOX2.p2	AF079564|USP2|9099|ubiquitin specific peptidase 2	AK301805|USP2|9099|ubiquitin specific peptidase 2	AK292255|USP2|9099|ubiquitin specific peptidase 2
hg19_v1_chr11_+_57365026_57365209	0.043384	SOX2.p2	NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg19_v1_chr17_-_4046244_4046261	0.043319	SOX2.p2	AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1
hg19_v1_chr20_-_43150592_43150672	0.0432942	SOX2.p2	DQ896714|SERINC3|10955|serine incorporator 3	DQ893392|SERINC3|10955|serine incorporator 3	AK300618|SERINC3|10955|serine incorporator 3	AF112227|SERINC3|10955|serine incorporator 3	BC006088|SERINC3|10955|serine incorporator 3
hg19_v1_chr2_+_185463437_185463548	0.043287	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg19_v1_chr5_+_170288863_170288999	0.0432241	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	NM_022897|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg19_v1_chr8_+_61429390_61429491	0.0431966	SOX2.p2	NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr14_+_50234783_50234891	0.0431179	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr2_+_10183630_10183955	0.043051	SOX2.p2	BC063286|KLF11|8462|Kruppel-like factor 11	NM_003597|KLF11|8462|Kruppel-like factor 11	AK315345|KLF11|8462|Kruppel-like factor 11	AF272830|KLF11|8462|Kruppel-like factor 11	AK289816|KLF11|8462|Kruppel-like factor 11	BC069383|KLF11|8462|Kruppel-like factor 11	BC074922|KLF11|8462|Kruppel-like factor 11	AF028008|KLF11|8462|Kruppel-like factor 11	AJ275989|KLF11|8462|Kruppel-like factor 11	AK316439|KLF11|8462|Kruppel-like factor 11	NM_001177716|KLF11|8462|Kruppel-like factor 11
hg19_v1_chr1_-_179112178_179112223	0.0430408	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg19_v1_chr16_+_71496180_71496197	0.0430279	SOX2.p2	
hg19_v1_chr6_+_25962978_25963089	0.0428539	SOX2.p2	BX640949|TRIM38|10475|tripartite motif containing 38	AK313248|TRIM38|10475|tripartite motif containing 38	BC026930|TRIM38|10475|tripartite motif containing 38	NM_006355|TRIM38|10475|tripartite motif containing 38	AB209906|TRIM38|10475|tripartite motif containing 38
hg19_v1_chr4_+_41614933_41615091	0.0428084	SOX2.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr7_-_148725500_148725610	0.0427423	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg19_v1_chr7_+_5632435_5632441	0.0424996	SOX2.p2	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)	AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v1_chr15_+_51973549_51973713	0.0423698	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg19_v1_chr8_-_27115935_27115980	0.0423592	SOX2.p2	AK297415|STMN4|81551|stathmin-like 4
hg19_v1_chr5_-_83680590_83680738	0.0422754	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr10_+_111765725_111765838	0.042264	SOX2.p2	NM_019903|ADD3|120|adducin 3 (gamma)	AB209810|ADD3|120|adducin 3 (gamma)	BC057285|ADD3|120|adducin 3 (gamma)
hg19_v1_chr4_-_110624550_110624632	0.0422188	SOX2.p2	DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase	U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase
hg19_v1_chr2_+_201170795_201171404	0.0422152	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg19_v1_chr2_+_201676774_201677130	0.0421254	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1	NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1	AK297227|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr12_+_27397077_27397171	0.0418839	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg19_v1_chr9_-_8733893_8733945	0.041877	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg19_v1_chr7_+_26191732_26192135	0.0417998	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg19_v1_chr1_+_182808436_182808478	0.0417865	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg19_v1_chr12_+_32260084_32260263	0.0417709	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg19_v1_chr1_+_43148359_43148810	0.0417316	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg19_v1_chr5_-_88178964_88179049	0.0417225	SOX2.p2	AK312472|MEF2C|4208|myocyte enhancer factor 2C	L08895|MEF2C|4208|myocyte enhancer factor 2C	AK307883|MEF2C|4208|myocyte enhancer factor 2C	BC026341|MEF2C|4208|myocyte enhancer factor 2C
hg19_v1_chrX_+_119737905_119737982	0.0416558	SOX2.p2	BC095461|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr5_+_42548314_42548314	0.041631	SOX2.p2	NM_001242403|GHR|2690|growth hormone receptor	Z11802|GHR|2690|growth hormone receptor
hg19_v1_chr5_+_176560056_176560079	0.0415192	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg19_v1_chr15_-_59225766_59225798	0.0414725	SOX2.p2	AK000867|SLTM|79811|SAFB-like, transcription modulator	AK055195|SLTM|79811|SAFB-like, transcription modulator	BC108656|SLTM|79811|SAFB-like, transcription modulator	AK291423|SLTM|79811|SAFB-like, transcription modulator	AK131242|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr7_-_99699030_99699045	0.0414704	SOX2.p2	D55716|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr3_+_179322572_179322615	0.0414054	SOX2.p2	NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa	BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v1_chr3_-_160283071_160283118	0.0413897	SOX2.p2	AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)
hg19_v1_chr5_+_155753755_155753766	0.0413748	SOX2.p2	BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg19_v1_chr1_-_205325915_205326165	0.0413256	SOX2.p2	AK299227|KLHDC8A|55220|kelch domain containing 8A	AK001610|KLHDC8A|55220|kelch domain containing 8A	NM_018203|KLHDC8A|55220|kelch domain containing 8A	AK096590|KLHDC8A|55220|kelch domain containing 8A
hg19_v1_chr15_-_40331316_40331388	0.0413097	SOX2.p2	AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)	NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)
hg19_v1_chr11_+_129979330_129979349	0.0412043	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr15_-_89764809_89765003	0.0411435	SOX2.p2	AK312457|RLBP1|6017|retinaldehyde binding protein 1	BC004199|RLBP1|6017|retinaldehyde binding protein 1	NM_000326|RLBP1|6017|retinaldehyde binding protein 1	DQ980611|RLBP1|6017|retinaldehyde binding protein 1
hg19_v1_chr1_+_245133067_245133170	0.0411247	SOX2.p2	NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2
hg19_v1_chr3_-_38992051_38992051	0.0410416	SOX2.p2	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v1_chr8_+_136470108_136470294	0.0408862	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg19_v1_chr7_+_142560512_142560518	0.0408333	SOX2.p2	BC110606|EPHB6|2051|EPH receptor B6	BC110607|EPHB6|2051|EPH receptor B6
hg19_v1_chr16_+_67907018_67907035	0.0407576	SOX2.p2	BC043616|EDC4|23644|enhancer of mRNA decapping 4	BC064567|EDC4|23644|enhancer of mRNA decapping 4	L26339|EDC4|23644|enhancer of mRNA decapping 4
hg19_v1_chr3_+_154797910_154797952	0.0407211	SOX2.p2	NM_007288|MME|4311|membrane metallo-endopeptidase
hg19_v1_chr7_-_99774821_99775034	0.040714	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg19_v1_chr12_-_16759733_16759733	0.0406215	SOX2.p2	BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr8_-_23261675_23261721	0.0405492	SOX2.p2	NM_002318|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr8_+_98656329_98656426	0.0405212	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg19_v1_chr7_-_8301681_8301752	0.0405172	SOX2.p2	NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa	U26591|ICA1|3382|islet cell autoantigen 1, 69kDa
hg19_v1_chr9_+_97521930_97522065	0.0403287	SOX2.p2	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg19_v1_chr5_-_98262217_98262239	0.0402627	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg19_v1_chr13_-_107220444_107220527	0.0402399	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg19_v1_chr4_+_41540320_41540334	0.0401264	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr1_+_153606457_153606546	0.0400556	SOX2.p2	NM_001206612|CHTOP|26097|chromatin target of PRMT1	NM_001244664|CHTOP|26097|chromatin target of PRMT1	NM_015607|CHTOP|26097|chromatin target of PRMT1	AF261137|CHTOP|26097|chromatin target of PRMT1
hg19_v1_chr19_-_50316360_50316607	0.0399361	SOX2.p2	BC010092|FUZ|80199|fuzzy homolog (Drosophila)	AK057964|FUZ|80199|fuzzy homolog (Drosophila)	BC004445|FUZ|80199|fuzzy homolog (Drosophila)	BC016793|FUZ|80199|fuzzy homolog (Drosophila)	AK026341|FUZ|80199|fuzzy homolog (Drosophila)	AK315445|FUZ|80199|fuzzy homolog (Drosophila)	AK295072|FUZ|80199|fuzzy homolog (Drosophila)	NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)	NM_025129|FUZ|80199|fuzzy homolog (Drosophila)
hg19_v1_chr14_+_75229995_75230069	0.0399031	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg19_v1_chr9_-_132586398_132586415	0.0398647	SOX2.p2	BC000674|TOR1A|1861|torsin family 1, member A (torsin A)	AF007871|TOR1A|1861|torsin family 1, member A (torsin A)	AK056062|TOR1A|1861|torsin family 1, member A (torsin A)
hg19_v1_chr15_+_74218811_74218819	0.0397945	SOX2.p2	BC015090|LOXL1|4016|lysyl oxidase-like 1	L21186|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr16_-_1464634_1464722	0.0397524	SOX2.p2	AM944365|UNKL|64718|unkempt homolog (Drosophila)-like	BC011924|UNKL|64718|unkempt homolog (Drosophila)-like	AK124977|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like	NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like
hg19_v1_chr7_-_99698993_99699029	0.0395725	SOX2.p2	BC013375|MCM7|4176|minichromosome maintenance complex component 7	D86748|MCM7|4176|minichromosome maintenance complex component 7	AK096959|MCM7|4176|minichromosome maintenance complex component 7	AK314575|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr17_-_42908178_42908178	0.0395586	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg19_v1_chr3_-_125775609_125775617	0.039387	SOX2.p2	AK093380|SLC41A3|54946|solute carrier family 41, member 3	NM_001008487|SLC41A3|54946|solute carrier family 41, member 3
hg19_v1_chr1_-_26232890_26232992	0.0393826	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg19_v1_chr22_-_17640076_17640152	0.0393194	SOX2.p2	AK001034|CECR5|27440|cat eye syndrome chromosome region, candidate 5	BC042540|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr19_-_44143943_44144031	0.0390285	SOX2.p2	BC068457|CADM4|199731|cell adhesion molecule 4	AK313028|CADM4|199731|cell adhesion molecule 4	AF363368|CADM4|199731|cell adhesion molecule 4	BC113963|CADM4|199731|cell adhesion molecule 4	NM_145296|CADM4|199731|cell adhesion molecule 4
hg19_v1_chr12_-_6772252_6772360	0.0389891	SOX2.p2	BC013038|ING4|51147|inhibitor of growth family, member 4	AB197695|ING4|51147|inhibitor of growth family, member 4	AB197696|ING4|51147|inhibitor of growth family, member 4	AB197697|ING4|51147|inhibitor of growth family, member 4	EF152349|ING4|51147|inhibitor of growth family, member 4	EF152350|ING4|51147|inhibitor of growth family, member 4	EF152351|ING4|51147|inhibitor of growth family, member 4	EF152352|ING4|51147|inhibitor of growth family, member 4	BC007781|ING4|51147|inhibitor of growth family, member 4	BC095434|ING4|51147|inhibitor of growth family, member 4	AK313621|ING4|51147|inhibitor of growth family, member 4	AF110645|ING4|51147|inhibitor of growth family, member 4	AF156552|ING4|51147|inhibitor of growth family, member 4	AF063594|ING4|51147|inhibitor of growth family, member 4	AK293169|ING4|51147|inhibitor of growth family, member 4	AK303354|ING4|51147|inhibitor of growth family, member 4	NM_001127582|ING4|51147|inhibitor of growth family, member 4	NM_001127583|ING4|51147|inhibitor of growth family, member 4	NM_001127584|ING4|51147|inhibitor of growth family, member 4	NM_001127585|ING4|51147|inhibitor of growth family, member 4	NM_001127586|ING4|51147|inhibitor of growth family, member 4	NM_016162|ING4|51147|inhibitor of growth family, member 4
hg19_v1_chrX_+_71364033_71364033	0.0389476	SOX2.p2	AK126598|FLJ44635|392490|TPT1-like protein	AY572224|FLJ44635|392490|TPT1-like protein	NM_207422|FLJ44635|392490|TPT1-like protein
hg19_v1_chr5_+_42548144_42548144	0.0387981	SOX2.p2	NM_001242402|GHR|2690|growth hormone receptor
hg19_v1_chr12_-_16758839_16758903	0.0387378	SOX2.p2	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr3_-_25683825_25683851	0.0384554	SOX2.p2	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg19_v1_chr20_-_43150673_43150683	0.0382677	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg19_v1_chr22_-_17640153_17640167	0.0382517	SOX2.p2	AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5	AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr15_-_42749710_42749764	0.0382258	SOX2.p2	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)	BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)	NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)	AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)
hg19_v1_chr20_-_44175995_44176064	0.037922	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg19_v1_chr17_+_65822242_65822257	0.0378935	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg19_v1_chr8_-_17270800_17270859	0.0378488	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	HQ258354|MTMR7|9108|myotubularin related protein 7	HQ258491|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg19_v1_chr9_-_91793681_91793739	0.0378028	SOX2.p2	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr17_+_28804420_28804447	0.0375216	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg19_v1_chr3_-_185655833_185655923	0.0375001	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr8_+_23101149_23101168	0.0374483	SOX2.p2	AK097202|CHMP7|91782|charged multivesicular body protein 7	NM_152272|CHMP7|91782|charged multivesicular body protein 7	BC042050|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr11_+_63706433_63706535	0.0374447	SOX2.p2	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)
hg19_v1_chr6_-_155777036_155777036	0.037339	SOX2.p2	AF190122|NOX3|50508|NADPH oxidase 3	NM_015718|NOX3|50508|NADPH oxidase 3
hg19_v1_chr3_-_45267804_45267846	0.0373208	SOX2.p2	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr1_+_35851101_35851133	0.0372827	SOX2.p2	BX648067|ZMYM4|9202|zinc finger, MYM-type 4
hg19_v1_chr2_+_216986817_216986917	0.0371745	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v1_chr1_+_151227209_151227234	0.0370987	SOX2.p2	BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr7_-_23509972_23510024	0.0370356	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg19_v1_chr14_+_62164339_62164339	0.0369783	SOX2.p2	FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr10_-_33623978_33624019	0.0368923	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg19_v1_chr17_+_28705960_28705972	0.0368707	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg19_v1_chr17_+_28705981_28705998	0.0367571	SOX2.p2	U65090|CPD|1362|carboxypeptidase D
hg19_v1_chr12_+_7045437_7045476	0.0366499	SOX2.p2	
hg19_v1_chr14_+_39703119_39703318	0.0365505	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	HQ258350|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg19_v1_chr9_-_95166827_95166980	0.0365061	SOX2.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg19_v1_chr10_-_33224485_33224485	0.0363352	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chrX_+_54947228_54947287	0.0361987	SOX2.p2	AK299568|TRO|7216|trophinin	AF349719|TRO|7216|trophinin	AF349720|TRO|7216|trophinin	AF349721|TRO|7216|trophinin	AF349722|TRO|7216|trophinin	NM_001039705|TRO|7216|trophinin	NM_016157|TRO|7216|trophinin	NM_177556|TRO|7216|trophinin	AK027489|TRO|7216|trophinin	AK296329|TRO|7216|trophinin	BC026914|TRO|7216|trophinin	AB029037|TRO|7216|trophinin	AK225841|TRO|7216|trophinin
hg19_v1_chr5_+_156607847_156607987	0.0361956	SOX2.p2	AB209622|ITK|3702|IL2-inducible T-cell kinase	D13720|ITK|3702|IL2-inducible T-cell kinase	NM_005546|ITK|3702|IL2-inducible T-cell kinase	BC109077|ITK|3702|IL2-inducible T-cell kinase	BC109078|ITK|3702|IL2-inducible T-cell kinase	AK312846|ITK|3702|IL2-inducible T-cell kinase	AK303609|ITK|3702|IL2-inducible T-cell kinase
hg19_v1_chr2_-_39664129_39664290	0.0361584	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v1_chr8_-_23261626_23261631	0.0361528	SOX2.p2	U89942|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr3_-_149086884_149086954	0.0360401	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr4_+_47487230_47487431	0.0359091	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg19_v1_chr14_+_37131116_37131134	0.0358846	SOX2.p2	AK313627|PAX9|5083|paired box 9	AB248958|PAX9|5083|paired box 9
hg19_v1_chr12_-_16759939_16760083	0.0357898	SOX2.p2	AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr6_-_108582307_108582463	0.0357713	SOX2.p2	NM_003795|SNX3|8724|sorting nexin 3	NM_152827|SNX3|8724|sorting nexin 3
hg19_v1_chr9_-_77502635_77502834	0.035728	SOX2.p2	AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6
hg19_v1_chr1_+_87170222_87170280	0.0355519	SOX2.p2	NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr19_-_42463437_42463499	0.0355441	SOX2.p2	AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)	BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)	CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)	CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)	AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)	AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)	BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr12_-_111893857_111893989	0.0355133	SOX2.p2	
hg19_v1_chr19_-_42569921_42569956	0.0354333	SOX2.p2	S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5
hg19_v1_chr8_+_81398416_81398552	0.0353597	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg19_v1_chrX_+_119737984_119738091	0.0353307	SOX2.p2	BC001013|MCTS1|28985|malignant T cell amplified sequence 1	AY364258|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr2_+_127413739_127413845	0.0352425	SOX2.p2	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg19_v1_chr5_+_102201526_102201535	0.0352413	SOX2.p2	BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase	NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase
hg19_v1_chr12_+_120907599_120907691	0.0351865	SOX2.p2	NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr6_+_34204690_34204721	0.035062	SOX2.p2	BC063434|HMGA1|3159|high mobility group AT-hook 1	BC004924|HMGA1|3159|high mobility group AT-hook 1	BC008832|HMGA1|3159|high mobility group AT-hook 1	BC008963|HMGA1|3159|high mobility group AT-hook 1	BC071864|HMGA1|3159|high mobility group AT-hook 1	BC071863|HMGA1|3159|high mobility group AT-hook 1	BC067083|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr15_+_57210823_57210832	0.0349191	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg19_v1_chr4_-_83351294_83351413	0.0348432	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_001207000|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr3_-_195310985_195311075	0.0347663	SOX2.p2	NM_001647|APOD|347|apolipoprotein D
hg19_v1_chr19_-_42463500_42463541	0.0346201	SOX2.p2	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)
hg19_v1_chr5_+_140529619_140529838	0.034566	SOX2.p2	AK299661|PCDHB6|56130|protocadherin beta 6	AK313482|PCDHB6|56130|protocadherin beta 6	AF152499|PCDHB6|56130|protocadherin beta 6	AF217752|PCDHB6|56130|protocadherin beta 6	NM_018939|PCDHB6|56130|protocadherin beta 6
hg19_v1_chr4_+_154125589_154125621	0.0345166	SOX2.p2	AK308731|TRIM2|23321|tripartite motif containing 2	NM_015271|TRIM2|23321|tripartite motif containing 2	AB011089|TRIM2|23321|tripartite motif containing 2	AF220018|TRIM2|23321|tripartite motif containing 2
hg19_v1_chr19_+_20011700_20011869	0.0344885	SOX2.p2	NM_031218|ZNF93|81931|zinc finger protein 93	BC020837|ZNF93|81931|zinc finger protein 93	BC070372|ZNF93|81931|zinc finger protein 93	BC107581|ZNF93|81931|zinc finger protein 93	AK096342|ZNF93|81931|zinc finger protein 93	BC058821|ZNF93|81931|zinc finger protein 93	BC038096|ZNF93|81931|zinc finger protein 93	BC136718|ZNF93|81931|zinc finger protein 93	BC136719|ZNF93|81931|zinc finger protein 93
hg19_v1_chr19_-_58609606_58609729	0.0344706	SOX2.p2	AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18	NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr6_-_28304151_28304151	0.0344248	SOX2.p2	NM_001243241|ZNF323|64288|zinc finger protein 323	NM_001243242|ZNF323|64288|zinc finger protein 323	NM_001243244|ZNF323|64288|zinc finger protein 323	NM_030899|ZNF323|64288|zinc finger protein 323
hg19_v1_chr6_+_17600504_17600695	0.0344222	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg19_v1_chr14_+_64971226_64971291	0.0343822	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr8_-_105601234_105601261	0.0342529	SOX2.p2	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr2_+_231921562_231921592	0.0342062	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr3_-_164796275_164796282	0.0341723	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg19_v1_chr8_+_64081187_64081213	0.0341037	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr2_+_219082119_219082193	0.0340807	SOX2.p2	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v1_chr15_-_59225800_59225863	0.0340204	SOX2.p2	BC140851|SLTM|79811|SAFB-like, transcription modulator	NM_001013843|SLTM|79811|SAFB-like, transcription modulator	NM_024755|SLTM|79811|SAFB-like, transcription modulator
hg19_v1_chr11_-_62783281_62783316	0.0340136	SOX2.p2	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8	NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8
hg19_v1_chr7_+_141811508_141811570	0.0339824	SOX2.p2	AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene	BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene	BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene
hg19_v1_chr22_-_41682169_41682183	0.0338245	SOX2.p2	BC014044|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chr5_+_34656595_34656599	0.0338003	SOX2.p2	AB037755|RAI14|26064|retinoic acid induced 14	NM_001145520|RAI14|26064|retinoic acid induced 14
hg19_v1_chr9_-_21305311_21305311	0.0337613	SOX2.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg19_v1_chr1_+_150039815_150039913	0.033541	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v1_chr9_-_140083010_140083021	0.0334966	SOX2.p2	AK294601|ANAPC2|29882|anaphase promoting complex subunit 2
hg19_v1_chr19_-_47735858_47736022	0.0334848	SOX2.p2	AK298837|BBC3|27113|BCL2 binding component 3	AF354654|BBC3|27113|BCL2 binding component 3	AF354655|BBC3|27113|BCL2 binding component 3	AF354656|BBC3|27113|BCL2 binding component 3	NM_001127240|BBC3|27113|BCL2 binding component 3	NM_001127241|BBC3|27113|BCL2 binding component 3	NM_001127242|BBC3|27113|BCL2 binding component 3
hg19_v1_chr1_-_200377262_200377276	0.0334218	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg19_v1_chr22_+_19701968_19702117	0.0334182	SOX2.p2	NM_002688|SEPT5|5413|septin 5	BC025261|SEPT5|5413|septin 5	U74628|SEPT5|5413|septin 5	U85431|SEPT5|5413|septin 5	Y11593|SEPT5|5413|septin 5	CR456545|SEPT5|5413|septin 5	CU013145|SEPT5|5413|septin 5	CU013433|SEPT5|5413|septin 5	AK295940|SEPT5|5413|septin 5
hg19_v1_chr10_-_119805673_119806415	0.0332197	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg19_v1_chr3_-_185655806_185655824	0.0332088	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr8_-_29940487_29940658	0.0332088	SOX2.p2	Z70223|TMEM66|51669|transmembrane protein 66	BC015012|TMEM66|51669|transmembrane protein 66	AF078855|TMEM66|51669|transmembrane protein 66	AB028926|TMEM66|51669|transmembrane protein 66	AK295360|TMEM66|51669|transmembrane protein 66	AK075340|TMEM66|51669|transmembrane protein 66	AK314659|TMEM66|51669|transmembrane protein 66	AK025927|TMEM66|51669|transmembrane protein 66	AY359104|TMEM66|51669|transmembrane protein 66	NM_016127|TMEM66|51669|transmembrane protein 66	AK094386|TMEM66|51669|transmembrane protein 66
hg19_v1_chr2_-_225370687_225370770	0.0331814	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg19_v1_chr3_+_184032849_184033283	0.0331047	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr2_+_231921595_231921607	0.0330508	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr16_-_1832304_1832566	0.0330477	SOX2.p2	BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3
hg19_v1_chr12_+_56137063_56137182	0.0329226	SOX2.p2	NM_005811|GDF11|10220|growth differentiation factor 11	AF100907|GDF11|10220|growth differentiation factor 11	AF028333|GDF11|10220|growth differentiation factor 11
hg19_v1_chr3_-_18466759_18466836	0.0328941	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg19_v1_chr9_-_132597561_132597598	0.0328163	SOX2.p2	NM_016520|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr19_+_50016490_50016498	0.0328075	SOX2.p2	BC008734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha
hg19_v1_chr4_+_699529_699731	0.0328036	SOX2.p2	AK225892|PCGF3|10336|polycomb group ring finger 3	NM_006315|PCGF3|10336|polycomb group ring finger 3	AK057124|PCGF3|10336|polycomb group ring finger 3	AK300290|PCGF3|10336|polycomb group ring finger 3	AK125801|PCGF3|10336|polycomb group ring finger 3
hg19_v1_chr4_+_88343702_88344056	0.032773	SOX2.p2	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg19_v1_chr1_-_1167358_1167371	0.0327375	SOX2.p2	AK223079|SDF4|51150|stromal cell derived factor 4	AK222521|SDF4|51150|stromal cell derived factor 4	AK315517|SDF4|51150|stromal cell derived factor 4	AF132749|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr8_+_98656428_98656491	0.0326863	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg19_v1_chr1_-_1623942_1623988	0.0325581	SOX2.p2	CR936618|SLC35E2B|728661|solute carrier family 35, member E2B	BC062371|SLC35E2|9906|solute carrier family 35, member E2
hg19_v1_chrX_+_52780279_52780345	0.0325415	SOX2.p2	BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B	NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2	NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2	Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2	X86175|SSX2|6757|synovial sarcoma, X breakpoint 2	BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2	BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2	BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2	BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2
hg19_v1_chr3_-_186857188_186857324	0.0325052	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like
hg19_v1_chr8_-_29940464_29940485	0.0324812	SOX2.p2	AF490252|TMEM66|51669|transmembrane protein 66	DQ892451|TMEM66|51669|transmembrane protein 66	DQ895663|TMEM66|51669|transmembrane protein 66	AF100748|TMEM66|51669|transmembrane protein 66	AK222632|TMEM66|51669|transmembrane protein 66	AK315956|TMEM66|51669|transmembrane protein 66
hg19_v1_chr8_-_121824287_121824726	0.0324637	SOX2.p2	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v1_chr2_-_211018294_211018388	0.0324461	SOX2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chr1_+_151227188_151227206	0.0324314	SOX2.p2	NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr19_-_58067724_58067724	0.0323773	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg19_v1_chr2_+_90077732_90077776	0.0321174	SOX2.p2	
hg19_v1_chr12_+_120933916_120933953	0.0319458	SOX2.p2	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1
hg19_v1_chr15_+_91447419_91447419	0.0317553	SOX2.p2	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2
hg19_v1_chrX_+_48114796_48114809	0.0317502	SOX2.p2	NM_005635|SSX1|6756|synovial sarcoma, X breakpoint 1	X86174|SSX1|6756|synovial sarcoma, X breakpoint 1	BC150487|SSX1|6756|synovial sarcoma, X breakpoint 1	BC001003|SSX1|6756|synovial sarcoma, X breakpoint 1	BC125151|SSX1|6756|synovial sarcoma, X breakpoint 1	BC133693|SSX1|6756|synovial sarcoma, X breakpoint 1	BC128611|SSX1|6756|synovial sarcoma, X breakpoint 1
hg19_v1_chr17_+_42264573_42264581	0.0317461	SOX2.p2	AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr10_+_101088794_101088855	0.0317353	SOX2.p2	NM_020348|CNNM1|26507|cyclin M1
hg19_v1_chr19_-_40324747_40324849	0.031719	SOX2.p2	AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v1_chr14_-_50583194_50583347	0.0316001	SOX2.p2	AK129564|METTL21D|79609|methyltransferase like 21D	BX247997|METTL21D|79609|methyltransferase like 21D	BC027585|METTL21D|79609|methyltransferase like 21D	AK023982|METTL21D|79609|methyltransferase like 21D	NM_001040662|METTL21D|79609|methyltransferase like 21D	NM_024558|METTL21D|79609|methyltransferase like 21D	BC105118|METTL21D|79609|methyltransferase like 21D	BC143673|METTL21D|79609|methyltransferase like 21D	BC143674|METTL21D|79609|methyltransferase like 21D
hg19_v1_chrX_+_84498993_84499002	0.0315945	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg19_v1_chr4_-_120550142_120550183	0.0315729	SOX2.p2	
hg19_v1_chr3_-_122134881_122134954	0.031564	SOX2.p2	BC025762|WDR5B|54554|WD repeat domain 5B	NM_019069|WDR5B|54554|WD repeat domain 5B
hg19_v1_chr17_+_67410825_67410927	0.0315285	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg19_v1_chr11_+_129940462_129940462	0.0314563	SOX2.p2	AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2	NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg19_v1_chr6_-_24877453_24877582	0.0314345	SOX2.p2	U49187|FAM65B|9750|family with sequence similarity 65, member B	AK300138|FAM65B|9750|family with sequence similarity 65, member B	BC001232|FAM65B|9750|family with sequence similarity 65, member B	NM_015864|FAM65B|9750|family with sequence similarity 65, member B
hg19_v1_chr14_+_103800534_103800546	0.0313892	SOX2.p2	AL080102|EIF5|1983|eukaryotic translation initiation factor 5	AK026933|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr17_+_42264300_42264417	0.031135	SOX2.p2	AK294198|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AK096631|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_001076674|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	NM_024107|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	AY358780|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC063489|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2	BC004306|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr16_+_70333096_70333200	0.0311111	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg19_v1_chr10_-_13390018_13390061	0.031053	SOX2.p2	AK301568|SEPHS1|22929|selenophosphate synthetase 1	AK309829|SEPHS1|22929|selenophosphate synthetase 1
hg19_v1_chr10_+_127408225_127408399	0.0310305	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr16_-_46865039_46865137	0.0310251	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg19_v1_chr13_-_36920777_36920939	0.0308689	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr12_-_58146108_58146108	0.0308462	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr22_+_50312333_50312417	0.0308041	SOX2.p2	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2	AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2	BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2	DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2	AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr18_-_31802433_31802433	0.0307346	SOX2.p2	NM_001198547|NOL4|8715|nucleolar protein 4
hg19_v1_chr4_-_106629803_106629880	0.0306693	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg19_v1_chr5_-_54603401_54603522	0.0306465	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg19_v1_chr2_+_231921608_231921624	0.0305964	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr5_-_146889618_146889635	0.0305898	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg19_v1_chr3_-_167813058_167813173	0.0305242	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg19_v1_chr9_-_36400817_36400977	0.0305065	SOX2.p2	AK093480|RNF38|152006|ring finger protein 38	AX748155|RNF38|152006|ring finger protein 38	AF394047|RNF38|152006|ring finger protein 38	NM_194328|RNF38|152006|ring finger protein 38	NM_194332|RNF38|152006|ring finger protein 38
hg19_v1_chr17_-_79829237_79829260	0.0305055	SOX2.p2	BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr17_+_25958217_25958240	0.0304634	SOX2.p2	AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9	BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9	AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg19_v1_chrX_+_128674181_128674416	0.0304221	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg19_v1_chr12_-_58146025_58146107	0.0303781	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr3_-_185655648_185655774	0.030322	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg19_v1_chr4_-_54930706_54930764	0.0302642	SOX2.p2	AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2	BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr4_-_69434215_69434244	0.030258	SOX2.p2	AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17	U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v1_chr8_+_85095501_85095585	0.0302341	SOX2.p2	AK095560|RALYL|138046|RALY RNA binding protein-like	AK094543|RALYL|138046|RALY RNA binding protein-like	AF495529|RALYL|138046|RALY RNA binding protein-like	AF495530|RALYL|138046|RALY RNA binding protein-like	NM_173848|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr17_+_25958151_25958185	0.0302057	SOX2.p2	NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9	NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9
hg19_v1_chr1_-_24239758_24239851	0.0301843	SOX2.p2	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)	NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)	X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)
hg19_v1_chr10_+_123754141_123754147	0.0300114	SOX2.p2	AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr19_+_13135745_13135776	0.0299229	SOX2.p2	L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr16_+_524843_524856	0.0298982	SOX2.p2	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)
hg19_v1_chr1_-_25747276_25747404	0.0296573	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295498|RHCE|6006|Rh blood group, CcEe antigens	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	FR691748|RHCE|6006|Rh blood group, CcEe antigens	FR691750|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	GU810838|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg19_v1_chr17_-_56032494_56032858	0.0296398	SOX2.p2	BC056882|CUEDC1|404093|CUE domain containing 1
hg19_v1_chr22_+_35777087_35777166	0.0294004	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1	JF323038|HMOX1|3162|heme oxygenase (decycling) 1
hg19_v1_chr12_-_58146118_58146229	0.0292846	SOX2.p2	BC005864|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr12_-_54582588_54582785	0.0292178	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v1_chr2_+_201676659_201676662	0.0291928	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr22_-_17640168_17640190	0.0291417	SOX2.p2	NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5
hg19_v1_chr16_-_31085503_31085640	0.0291068	SOX2.p2	BC021997|ZNF668|79759|zinc finger protein 668	NM_024706|ZNF668|79759|zinc finger protein 668
hg19_v1_chr13_-_36050758_36050835	0.0290695	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg19_v1_chr2_-_27545901_27545984	0.0290603	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg19_v1_chr5_+_175792444_175792534	0.0289472	SOX2.p2	BC059361|ARL10|285598|ADP-ribosylation factor-like 10	NM_173664|ARL10|285598|ADP-ribosylation factor-like 10
hg19_v1_chr1_-_216978708_216978708	0.0288641	SOX2.p2	AY388461|ESRRG|2104|estrogen-related receptor gamma	NM_001243514|ESRRG|2104|estrogen-related receptor gamma
hg19_v1_chr1_-_161102457_161102477	0.0288511	SOX2.p2	BC013910|DEDD|9191|death effector domain containing	NM_001039711|DEDD|9191|death effector domain containing	NM_032998|DEDD|9191|death effector domain containing
hg19_v1_chr5_+_137673702_137673814	0.0288461	SOX2.p2	NM_016605|FAM53C|51307|family with sequence similarity 53, member C
hg19_v1_chr1_-_201390845_201390873	0.0288053	SOX2.p2	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)	J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)	AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)	AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)	BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)	BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)	NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)
hg19_v1_chr17_-_79828691_79828789	0.0288025	SOX2.p2	NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr8_+_64081108_64081181	0.0287713	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg19_v1_chr16_-_75590107_75590225	0.0287513	SOX2.p2	AK096650|TMEM231|79583|transmembrane protein 231	NM_001077416|TMEM231|79583|transmembrane protein 231	BC010609|TMEM231|79583|transmembrane protein 231	AK307263|TMEM231|79583|transmembrane protein 231	AK025820|TMEM231|79583|transmembrane protein 231	BC063677|TMEM231|79583|transmembrane protein 231	AY358612|TMEM231|79583|transmembrane protein 231	AK290483|TMEM231|79583|transmembrane protein 231	NM_001077418|TMEM231|79583|transmembrane protein 231	NM_001077419|TMEM231|79583|transmembrane protein 231
hg19_v1_chr3_+_185303961_185304206	0.0287203	SOX2.p2	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v1_chr2_-_211035913_211036187	0.0286798	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg19_v1_chr14_-_76447445_76447497	0.0286259	SOX2.p2	AK313564|TGFB3|7043|transforming growth factor, beta 3	X14149|TGFB3|7043|transforming growth factor, beta 3	J03241|TGFB3|7043|transforming growth factor, beta 3
hg19_v1_chr20_+_42086533_42086673	0.0285016	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg19_v1_chr1_-_27998719_27998759	0.0284622	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg19_v1_chr20_-_5100443_5100668	0.0284181	SOX2.p2	CR536501|PCNA|5111|proliferating cell nuclear antigen	CR541799|PCNA|5111|proliferating cell nuclear antigen	DQ891403|PCNA|5111|proliferating cell nuclear antigen	DQ894581|PCNA|5111|proliferating cell nuclear antigen	M15796|PCNA|5111|proliferating cell nuclear antigen	BC000491|PCNA|5111|proliferating cell nuclear antigen	BC062439|PCNA|5111|proliferating cell nuclear antigen	D28458|PCNA|5111|proliferating cell nuclear antigen	AK313286|PCNA|5111|proliferating cell nuclear antigen	NM_182649|PCNA|5111|proliferating cell nuclear antigen
hg19_v1_chr4_-_95263986_95264026	0.028377	SOX2.p2	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg19_v1_chr19_-_45996470_45996517	0.0278146	SOX2.p2	AF004224|RTN2|6253|reticulon 2	NM_206901|RTN2|6253|reticulon 2
hg19_v1_chr2_+_231921625_231921736	0.0277154	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v1_chr7_-_99698916_99698992	0.0276998	SOX2.p2	DQ895947|MCM7|4176|minichromosome maintenance complex component 7	EU176445|MCM7|4176|minichromosome maintenance complex component 7	BC009398|MCM7|4176|minichromosome maintenance complex component 7	AK293172|MCM7|4176|minichromosome maintenance complex component 7	AK226175|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chrX_+_18709044_18709045	0.0276952	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg19_v1_chr8_-_17271015_17271039	0.0276857	SOX2.p2	NM_004686|MTMR7|9108|myotubularin related protein 7
hg19_v1_chr17_+_42634598_42635055	0.0276677	SOX2.p2	NM_001466|FZD2|2535|frizzled family receptor 2	BC052266|FZD2|2535|frizzled family receptor 2	L37882|FZD2|2535|frizzled family receptor 2	BC113402|FZD2|2535|frizzled family receptor 2	BC113404|FZD2|2535|frizzled family receptor 2	AB017364|FZD2|2535|frizzled family receptor 2
hg19_v1_chr2_+_198380294_198380319	0.0276596	SOX2.p2	NM_199482|MOB4|25843|MOB family member 4, phocein	AK289377|MOB4|25843|MOB family member 4, phocein	AF250319|MOB4|25843|MOB family member 4, phocein
hg19_v1_chr10_+_96698409_96698476	0.0276587	SOX2.p2	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v1_chr1_+_119911395_119911493	0.0276545	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg19_v1_chr17_-_61819120_61819163	0.0275932	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr11_+_63754300_63754327	0.027547	SOX2.p2	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1
hg19_v1_chr16_-_3068161_3068187	0.0275144	SOX2.p2	BC008934|CLDN6|9074|claudin 6	AK075329|CLDN6|9074|claudin 6	NM_021195|CLDN6|9074|claudin 6
hg19_v1_chr12_-_49582296_49582473	0.0274519	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg19_v1_chr13_-_75901897_75901948	0.0274423	SOX2.p2	CR749622|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr1_-_224033603_224033644	0.027412	SOX2.p2	BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2	AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2	U58334|TP53BP2|7159|tumor protein p53 binding protein, 2	BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2
hg19_v1_chr9_-_91793375_91793554	0.0273781	SOX2.p2	DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v1_chr19_+_13135809_13135860	0.0273434	SOX2.p2	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v1_chr15_+_48010685_48010685	0.0272927	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v1_chr11_-_66206260_66206313	0.0272544	SOX2.p2	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11	AB049638|MRPL11|65003|mitochondrial ribosomal protein L11	AK290084|MRPL11|65003|mitochondrial ribosomal protein L11	AK223112|MRPL11|65003|mitochondrial ribosomal protein L11	BC005002|MRPL11|65003|mitochondrial ribosomal protein L11	AF151871|MRPL11|65003|mitochondrial ribosomal protein L11	NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11	NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11
hg19_v1_chr3_-_149095333_149095399	0.0272346	SOX2.p2	CR456953|TM4SF1|4071|transmembrane 4 L six family member 1	BC010166|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr19_+_52074530_52074564	0.0271929	SOX2.p2	NM_007147|ZNF175|7728|zinc finger protein 175	BC007778|ZNF175|7728|zinc finger protein 175	AK292687|ZNF175|7728|zinc finger protein 175	BC052997|ZNF175|7728|zinc finger protein 175	D50419|ZNF175|7728|zinc finger protein 175
hg19_v1_chr9_-_138798957_138799366	0.0271249	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg19_v1_chr11_-_10590078_10590364	0.0270401	SOX2.p2	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1	NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1
hg19_v1_chr22_+_50312278_50312330	0.0270282	SOX2.p2	DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2	NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2	AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2
hg19_v1_chr17_-_73775822_73775861	0.0270231	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg19_v1_chr22_+_24115035_24115056	0.0269125	SOX2.p2	AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)	BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)
hg19_v1_chr14_+_23305913_23306026	0.0268738	SOX2.p2	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)
hg19_v1_chr6_+_12717036_12717051	0.026813	SOX2.p2	AK290017|PHACTR1|221692|phosphatase and actin regulator 1	NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1
hg19_v1_chr5_+_134209909_134210195	0.0267146	SOX2.p2	BC001615|TXNDC15|79770|thioredoxin domain containing 15	AK026278|TXNDC15|79770|thioredoxin domain containing 15	AK225454|TXNDC15|79770|thioredoxin domain containing 15	AK225462|TXNDC15|79770|thioredoxin domain containing 15	BC032568|TXNDC15|79770|thioredoxin domain containing 15	AK307529|TXNDC15|79770|thioredoxin domain containing 15	BX538131|TXNDC15|79770|thioredoxin domain containing 15	EU832512|TXNDC15|79770|thioredoxin domain containing 15	EU832593|TXNDC15|79770|thioredoxin domain containing 15
hg19_v1_chr2_-_99279935_99279935	0.0266968	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr7_-_148580600_148580626	0.0266783	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg19_v1_chr11_+_128563955_128563968	0.0266503	SOX2.p2	AK313370|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr9_-_132597540_132597559	0.026537	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr2_-_211179765_211179913	0.0265122	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg19_v1_chr15_-_55700456_55700707	0.0265059	SOX2.p2	AK292795|CCPG1|9236|cell cycle progression 1	BC039871|CCPG1|9236|cell cycle progression 1	BC027621|CCPG1|9236|cell cycle progression 1	AB033080|CCPG1|9236|cell cycle progression 1	AK022459|CCPG1|9236|cell cycle progression 1	BC015203|CCPG1|9236|cell cycle progression 1	NM_004748|CCPG1|9236|cell cycle progression 1	NM_001204450|CCPG1|9236|cell cycle progression 1	NM_001204451|CCPG1|9236|cell cycle progression 1	NM_020739|CCPG1|9236|cell cycle progression 1
hg19_v1_chr3_-_156878481_156878548	0.0264488	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg19_v1_chr10_+_81073763_81073916	0.0264116	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg19_v1_chr14_+_72398816_72398816	0.0263923	SOX2.p2	AK294895|RGS6|9628|regulator of G-protein signaling 6	NM_001204423|RGS6|9628|regulator of G-protein signaling 6
hg19_v1_chr1_-_23885916_23886053	0.0262929	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v1_chr1_+_151739130_151739191	0.0262458	SOX2.p2	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3	NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3	BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3	AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3
hg19_v1_chr11_+_5009420_5009439	0.026138	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg19_v1_chr19_-_52490050_52490102	0.0260631	SOX2.p2	AK021864|ZNF350|59348|zinc finger protein 350	AF309561|ZNF350|59348|zinc finger protein 350	AK023467|ZNF350|59348|zinc finger protein 350	NM_021632|ZNF350|59348|zinc finger protein 350
hg19_v1_chr1_+_24286300_24286310	0.0260344	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg19_v1_chr12_-_56709777_56709824	0.0260033	SOX2.p2	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)	AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr4_-_100273831_100273916	0.0259381	SOX2.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg19_v1_chr14_-_45603658_45603667	0.0259021	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa
hg19_v1_chrX_+_135579237_135579398	0.0258764	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg19_v1_chr7_+_77469446_77469572	0.0258591	SOX2.p2	BC022419|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2	NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2	NM_020432|PHTF2|57157|putative homeodomain transcription factor 2	AL831969|PHTF2|57157|putative homeodomain transcription factor 2	BC127093|PHTF2|57157|putative homeodomain transcription factor 2	BC127094|PHTF2|57157|putative homeodomain transcription factor 2	AM392983|PHTF2|57157|putative homeodomain transcription factor 2	AM393200|PHTF2|57157|putative homeodomain transcription factor 2
hg19_v1_chr3_+_9773494_9773603	0.0258332	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr18_-_44497307_44497520	0.0257045	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2
hg19_v1_chr6_-_84140758_84140825	0.0256746	SOX2.p2	AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr12_+_95611514_95611874	0.025645	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg19_v1_chr6_-_89927495_89927495	0.0255846	SOX2.p2	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1	NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1
hg19_v1_chr5_+_92920592_92920744	0.0255769	SOX2.p2	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1
hg19_v1_chr6_+_26365397_26365508	0.0254365	SOX2.p2	NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2	U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2	NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2	BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2	AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2
hg19_v1_chr1_+_63833324_63833337	0.0254024	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg19_v1_chr1_-_101360337_101360403	0.0253952	SOX2.p2	AK312895|EXTL2|2135|exostoses (multiple)-like 2	AB009284|EXTL2|2135|exostoses (multiple)-like 2	AF000416|EXTL2|2135|exostoses (multiple)-like 2	AK096914|EXTL2|2135|exostoses (multiple)-like 2	BC036015|EXTL2|2135|exostoses (multiple)-like 2	AK298124|EXTL2|2135|exostoses (multiple)-like 2
hg19_v1_chr3_-_45267620_45267797	0.0253485	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg19_v1_chr10_-_90750955_90751146	0.02533	SOX2.p2	AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg19_v1_chr4_-_145061787_145061903	0.0253261	SOX2.p2	AY950614|GYPA|2993|glycophorin A (MNS blood group)	DQ893046|GYPA|2993|glycophorin A (MNS blood group)	L07251|GYPA|2993|glycophorin A (MNS blood group)	L07253|GYPA|2993|glycophorin A (MNS blood group)	U00177|GYPA|2993|glycophorin A (MNS blood group)	U00178|GYPA|2993|glycophorin A (MNS blood group)	U00179|GYPA|2993|glycophorin A (MNS blood group)	X57023|GYPA|2993|glycophorin A (MNS blood group)	M12857|GYPA|2993|glycophorin A (MNS blood group)	M36281|GYPA|2993|glycophorin A (MNS blood group)	X51798|GYPA|2993|glycophorin A (MNS blood group)	BC013328|GYPA|2993|glycophorin A (MNS blood group)	EU338231|GYPA|2993|glycophorin A (MNS blood group)	EU338232|GYPA|2993|glycophorin A (MNS blood group)	EU338233|GYPA|2993|glycophorin A (MNS blood group)	EU338234|GYPA|2993|glycophorin A (MNS blood group)	L31860|GYPA|2993|glycophorin A (MNS blood group)	X08054|GYPA|2993|glycophorin A (MNS blood group)	BC005319|GYPA|2993|glycophorin A (MNS blood group)	AK290561|GYPA|2993|glycophorin A (MNS blood group)	NM_002099|GYPA|2993|glycophorin A (MNS blood group)
hg19_v1_chr1_-_115259381_115259388	0.0252476	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v1_chr3_-_182880463_182880666	0.0250801	SOX2.p2	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3	AK313172|LAMP3|27074|lysosomal-associated membrane protein 3	BC032940|LAMP3|27074|lysosomal-associated membrane protein 3	NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3
hg19_v1_chrX_-_99891690_99891847	0.0250126	SOX2.p2	BT006977|TSPAN6|7105|tetraspanin 6	CR457115|TSPAN6|7105|tetraspanin 6	DQ890668|TSPAN6|7105|tetraspanin 6	DQ893849|TSPAN6|7105|tetraspanin 6	AF053453|TSPAN6|7105|tetraspanin 6	AK299176|TSPAN6|7105|tetraspanin 6	AF133426|TSPAN6|7105|tetraspanin 6	AK309581|TSPAN6|7105|tetraspanin 6	AY358825|TSPAN6|7105|tetraspanin 6	AB097016|TSPAN6|7105|tetraspanin 6	AF043906|TSPAN6|7105|tetraspanin 6	U84895|TSPAN6|7105|tetraspanin 6	BC012389|TSPAN6|7105|tetraspanin 6	NM_003270|TSPAN6|7105|tetraspanin 6	AK075072|TSPAN6|7105|tetraspanin 6	AB209876|TSPAN6|7105|tetraspanin 6	AK315773|TSPAN6|7105|tetraspanin 6	AK300852|TSPAN6|7105|tetraspanin 6
hg19_v1_chr9_-_140082983_140083009	0.0249348	SOX2.p2	AF191337|ANAPC2|29882|anaphase promoting complex subunit 2	DQ890852|ANAPC2|29882|anaphase promoting complex subunit 2	DQ894007|ANAPC2|29882|anaphase promoting complex subunit 2	BC032503|ANAPC2|29882|anaphase promoting complex subunit 2	AK296204|ANAPC2|29882|anaphase promoting complex subunit 2
hg19_v1_chr5_-_140053126_140053170	0.024901	SOX2.p2	AY321065|DND1|373863|dead end homolog 1 (zebrafish)	DQ892455|DND1|373863|dead end homolog 1 (zebrafish)	DQ895667|DND1|373863|dead end homolog 1 (zebrafish)	EU176217|DND1|373863|dead end homolog 1 (zebrafish)	BC033496|DND1|373863|dead end homolog 1 (zebrafish)	NM_194249|DND1|373863|dead end homolog 1 (zebrafish)
hg19_v1_chr19_+_50354417_50354643	0.0248931	SOX2.p2	AJ617480|PTOV1|53635|prostate tumor overexpressed 1	BC042921|PTOV1|53635|prostate tumor overexpressed 1	U79287|PTOV1|53635|prostate tumor overexpressed 1
hg19_v1_chr17_-_73258441_73258443	0.0247413	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg19_v1_chr7_+_44836273_44836301	0.024646	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr17_-_79478236_79478585	0.0246205	SOX2.p2	BC009544|ACTG1|71|actin, gamma 1	BC010417|ACTG1|71|actin, gamma 1	BC018861|ACTG1|71|actin, gamma 1	M16247|ACTG1|71|actin, gamma 1
hg19_v1_chr17_+_32683470_32683593	0.0246002	SOX2.p2	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13	U59808|CCL13|6357|chemokine (C-C motif) ligand 13	AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13	BC008621|CCL13|6357|chemokine (C-C motif) ligand 13	U46767|CCL13|6357|chemokine (C-C motif) ligand 13	X98306|CCL13|6357|chemokine (C-C motif) ligand 13	DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13	DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13	BT007385|CCL13|6357|chemokine (C-C motif) ligand 13	CR450337|CCL13|6357|chemokine (C-C motif) ligand 13	Z77650|CCL13|6357|chemokine (C-C motif) ligand 13
hg19_v1_chr9_-_134955056_134955242	0.0245999	SOX2.p2	Z36848|MED27|9442|mediator complex subunit 27	AF104252|MED27|9442|mediator complex subunit 27	AF230382|MED27|9442|mediator complex subunit 27	DQ099387|MED27|9442|mediator complex subunit 27	EU446747|MED27|9442|mediator complex subunit 27	BC064608|MED27|9442|mediator complex subunit 27	BC070331|MED27|9442|mediator complex subunit 27
hg19_v1_chr5_-_83680191_83680301	0.0245822	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg19_v1_chr1_-_153514096_153514240	0.0244166	SOX2.p2	BC093955|S100A5|6276|S100 calcium binding protein A5	BC093957|S100A5|6276|S100 calcium binding protein A5	NM_002962|S100A5|6276|S100 calcium binding protein A5	Z18954|S100A5|6276|S100 calcium binding protein A5
hg19_v1_chr12_+_69633352_69633426	0.0243334	SOX2.p2	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v1_chr5_+_1801493_1801531	0.0243108	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg19_v1_chr1_-_13610486_13610554	0.0242873	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg19_v1_chr2_+_31456879_31456964	0.0242061	SOX2.p2	AK316006|EHD3|30845|EH-domain containing 3	NM_014600|EHD3|30845|EH-domain containing 3
hg19_v1_chr10_-_74114655_74114701	0.0241237	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg19_v1_chr14_+_65878579_65878661	0.0239867	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v1_chr12_+_110562139_110562303	0.023968	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg19_v1_chr1_-_1624180_1624254	0.0239219	SOX2.p2	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B	NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr6_+_139094656_139094925	0.023876	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A
hg19_v1_chr14_+_76071804_76071804	0.0238235	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg19_v1_chr8_+_90770201_90770368	0.0237912	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg19_v1_chr8_-_23261591_23261612	0.0236912	SOX2.p2	BC000594|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr9_-_127269689_127269719	0.0236517	SOX2.p2	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1	NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1
hg19_v1_chr14_-_88737160_88737273	0.0236175	SOX2.p2	EU978940|KCNK10|54207|potassium channel, subfamily K, member 10	EU978941|KCNK10|54207|potassium channel, subfamily K, member 10	BC075022|KCNK10|54207|potassium channel, subfamily K, member 10	BC075021|KCNK10|54207|potassium channel, subfamily K, member 10	AF385399|KCNK10|54207|potassium channel, subfamily K, member 10	NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10
hg19_v1_chr15_+_78730568_78730679	0.0236124	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	HQ258663|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg19_v1_chr6_+_131571298_131571298	0.0236045	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg19_v1_chr1_+_32479401_32479596	0.0235403	SOX2.p2	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1	U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1
hg19_v1_chr11_-_76091866_76092151	0.0235318	SOX2.p2	AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v1_chr14_-_24020766_24020874	0.0235221	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg19_v1_chr2_+_70142236_70142265	0.0234666	SOX2.p2	AK301088|MXD1|4084|MAX dimerization protein 1	AK312734|MXD1|4084|MAX dimerization protein 1
hg19_v1_chr2_+_191301020_191301120	0.0234524	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg19_v1_chrX_-_43832920_43832920	0.0234251	SOX2.p2	NM_000266|NDP|4693|Norrie disease (pseudoglioma)
hg19_v1_chr11_-_111750144_111750180	0.023366	SOX2.p2	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg19_v1_chr3_+_141457035_141457103	0.0233417	SOX2.p2	NM_001201370|RNF7|9616|ring finger protein 7	NM_014245|RNF7|9616|ring finger protein 7	NM_183237|RNF7|9616|ring finger protein 7
hg19_v1_chr7_-_102283237_102283315	0.0232719	SOX2.p2	EU341824|UPK3BL|100134938|uroplakin 3B-like	NM_001114403|UPK3BL|100134938|uroplakin 3B-like
hg19_v1_chr16_-_57481270_57481439	0.0232513	SOX2.p2	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg19_v1_chr5_-_77805930_77806179	0.0232437	SOX2.p2	D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2
hg19_v1_chr14_+_64971417_64971470	0.0231887	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr14_-_70826393_70826447	0.0231824	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v1_chr17_-_79829272_79829284	0.0231529	SOX2.p2	NM_001185078|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	NM_004309|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr12_-_56709831_56710127	0.0231409	SOX2.p2	AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)	AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)	NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr3_+_179280686_179280733	0.0230879	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg19_v1_chr13_-_36920603_36920645	0.0230417	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg19_v1_chr15_-_50647349_50647361	0.023006	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr11_+_10482677_10482686	0.0229683	SOX2.p2	NM_001172430|AMPD3|272|adenosine monophosphate deaminase 3	AK302970|AMPD3|272|adenosine monophosphate deaminase 3
hg19_v1_chr1_+_155036201_155036299	0.0229641	SOX2.p2	NM_005227|EFNA4|1945|ephrin-A4	NM_182689|EFNA4|1945|ephrin-A4	NM_182690|EFNA4|1945|ephrin-A4	BC107483|EFNA4|1945|ephrin-A4	AJ006352|EFNA4|1945|ephrin-A4	AJ006353|EFNA4|1945|ephrin-A4	U14188|EFNA4|1945|ephrin-A4	CR533569|EFNA4|1945|ephrin-A4
hg19_v1_chr15_-_35087748_35087926	0.0229615	SOX2.p2	AK129892|ACTC1|70|actin, alpha, cardiac muscle 1	AK056592|ACTC1|70|actin, alpha, cardiac muscle 1	AK129902|ACTC1|70|actin, alpha, cardiac muscle 1	AK290616|ACTC1|70|actin, alpha, cardiac muscle 1	BC009978|ACTC1|70|actin, alpha, cardiac muscle 1	NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1
hg19_v1_chr4_-_54930466_54930587	0.0229431	SOX2.p2	DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2	DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr1_+_84864214_84864259	0.0229374	SOX2.p2	AF274571|DNASE2B|58511|deoxyribonuclease II beta	NM_021233|DNASE2B|58511|deoxyribonuclease II beta	BC126136|DNASE2B|58511|deoxyribonuclease II beta	BC126138|DNASE2B|58511|deoxyribonuclease II beta	HQ258219|DNASE2B|58511|deoxyribonuclease II beta
hg19_v1_chr3_-_17741511_17741511	0.0229031	SOX2.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg19_v1_chr19_-_49401937_49401995	0.0228669	SOX2.p2	U82469|TULP2|7288|tubby like protein 2	BC026070|TULP2|7288|tubby like protein 2	NM_003323|TULP2|7288|tubby like protein 2
hg19_v1_chr12_-_56709656_56709772	0.0228263	SOX2.p2	AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)	AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)	BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)
hg19_v1_chr6_-_157745183_157745252	0.0226885	SOX2.p2	NM_018452|TMEM242|729515|transmembrane protein 242
hg19_v1_chr1_+_172502291_172502471	0.0226752	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg19_v1_chr3_-_48936227_48936436	0.0226408	SOX2.p2	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20	NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
hg19_v1_chr9_-_136344182_136344275	0.0226327	SOX2.p2	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6	NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6
hg19_v1_chr1_-_84464728_84464865	0.0226239	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg19_v1_chr10_+_118305427_118305604	0.0226098	SOX2.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg19_v1_chr1_+_161169104_161169104	0.0225795	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg19_v1_chr4_-_10118500_10118572	0.0225654	SOX2.p2	NM_005112|WDR1|9948|WD repeat domain 1	NM_017491|WDR1|9948|WD repeat domain 1
hg19_v1_chr6_-_108582167_108582221	0.0225416	SOX2.p2	BC008444|SNX3|8724|sorting nexin 3
hg19_v1_chr1_-_23857711_23857711	0.0224212	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg19_v1_chr17_+_42148097_42148302	0.0223693	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg19_v1_chr11_+_120973374_120973374	0.0223672	SOX2.p2	NM_005422|TECTA|7007|tectorin alpha
hg19_v1_chr11_+_128564130_128564154	0.0223408	SOX2.p2	AY029368|FLI1|2313|Friend leukemia virus integration 1	DQ892582|FLI1|2313|Friend leukemia virus integration 1	DQ896858|FLI1|2313|Friend leukemia virus integration 1
hg19_v1_chr1_+_215178884_215178884	0.0223289	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg19_v1_chr12_+_56360547_56360632	0.0223273	SOX2.p2	NM_001798|CDK2|1017|cyclin-dependent kinase 2	NM_052827|CDK2|1017|cyclin-dependent kinase 2	M68520|CDK2|1017|cyclin-dependent kinase 2	AK293246|CDK2|1017|cyclin-dependent kinase 2	AK291941|CDK2|1017|cyclin-dependent kinase 2	X62071|CDK2|1017|cyclin-dependent kinase 2	BC003065|CDK2|1017|cyclin-dependent kinase 2
hg19_v1_chr6_-_86351156_86351168	0.0221785	SOX2.p2	AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v1_chr1_-_204165542_204165620	0.0221383	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor
hg19_v1_chr1_+_29063132_29063435	0.0221339	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr9_-_134955243_134955257	0.0221015	SOX2.p2	BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene	BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene	AK298436|MED27|9442|mediator complex subunit 27	AK316345|MED27|9442|mediator complex subunit 27	BC002878|MED27|9442|mediator complex subunit 27	NM_004269|MED27|9442|mediator complex subunit 27
hg19_v1_chr17_+_42264582_42264653	0.0219909	SOX2.p2	AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2
hg19_v1_chr8_+_23145621_23145736	0.0219539	SOX2.p2	AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1	BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1
hg19_v1_chr9_+_35538628_35538628	0.0219009	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr5_+_140174443_140174549	0.0218464	SOX2.p2	BC003126|PCDHA2|56146|protocadherin alpha 2	NM_018905|PCDHA2|56146|protocadherin alpha 2	NM_031495|PCDHA2|56146|protocadherin alpha 2	AF152310|PCDHA2|56146|protocadherin alpha 2	AF152480|PCDHA2|56146|protocadherin alpha 2
hg19_v1_chr8_-_27115897_27115927	0.0218252	SOX2.p2	BC011520|STMN4|81551|stathmin-like 4	NM_030795|STMN4|81551|stathmin-like 4	BC111001|STMN4|81551|stathmin-like 4	AK295329|STMN4|81551|stathmin-like 4	AK225142|STMN4|81551|stathmin-like 4	AK294023|STMN4|81551|stathmin-like 4	AK309207|STMN4|81551|stathmin-like 4	AL136568|STMN4|81551|stathmin-like 4
hg19_v1_chr21_+_17102370_17102712	0.0217542	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg19_v1_chr2_+_160568973_160569017	0.0217359	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg19_v1_chr12_-_58146110_58146116	0.0217165	SOX2.p2	BC015669|CDK4|1019|cyclin-dependent kinase 4
hg19_v1_chr2_+_201676644_201676648	0.0217055	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr14_+_52781004_52781266	0.0216844	SOX2.p2	NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa	X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa
hg19_v1_chr9_-_113341772_113342356	0.0216591	SOX2.p2	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v1_chr3_-_149095517_149095567	0.0216206	SOX2.p2	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1	AK130271|TM4SF1|4071|transmembrane 4 L six family member 1	NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1
hg19_v1_chr1_-_21113090_21113146	0.0215423	SOX2.p2	BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3	BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr1_+_148558187_148558268	0.021485	SOX2.p2	NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15	AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15
hg19_v1_chrX_+_119738542_119738583	0.0214606	SOX2.p2	NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1	AK294834|MCTS1|28985|malignant T cell amplified sequence 1
hg19_v1_chr15_-_26108236_26108471	0.0212784	SOX2.p2	EU831492|ATP10A|57194|ATPase, class V, type 10A	EU831579|ATP10A|57194|ATPase, class V, type 10A	NM_024490|ATP10A|57194|ATPase, class V, type 10A	BC052251|ATP10A|57194|ATPase, class V, type 10A
hg19_v1_chr3_+_184056304_184056421	0.0212276	SOX2.p2	BC026221|FAM131A|131408|family with sequence similarity 131, member A
hg19_v1_chr12_-_120907411_120907497	0.0212079	SOX2.p2	U30825|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9	BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9	AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr15_-_28567249_28567294	0.0211926	SOX2.p2	AF071172|HERC2|8924|hect domain and RLD 2	BC015486|HERC2|8924|hect domain and RLD 2	BC142951|HERC2|8924|hect domain and RLD 2	BC045544|HERC2|8924|hect domain and RLD 2	NM_004667|HERC2|8924|hect domain and RLD 2
hg19_v1_chr17_-_73505914_73505968	0.0211052	SOX2.p2	AK300354|CASKIN2|57513|CASK interacting protein 2	NM_001142643|CASKIN2|57513|CASK interacting protein 2	AK315936|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr10_+_35426709_35426763	0.0209244	SOX2.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg19_v1_chr1_-_155214315_155214652	0.0208652	SOX2.p2	BC062626|GBAP1|2630|glucosidase, beta, acid pseudogene 1	AK311242|GBA|2629|glucosidase, beta, acid	AK312502|GBA|2629|glucosidase, beta, acid	BX648487|GBA|2629|glucosidase, beta, acid	AK300829|GBA|2629|glucosidase, beta, acid	AK291911|GBA|2629|glucosidase, beta, acid	AK300876|GBA|2629|glucosidase, beta, acid	NM_001005741|GBA|2629|glucosidase, beta, acid	NM_001005742|GBA|2629|glucosidase, beta, acid	NM_001171811|GBA|2629|glucosidase, beta, acid
hg19_v1_chr11_+_65407591_65407591	0.0207191	SOX2.p2	AB005666|SIPA1|6494|signal-induced proliferation-associated 1	NM_153253|SIPA1|6494|signal-induced proliferation-associated 1
hg19_v1_chr22_+_38598065_38598107	0.0206243	SOX2.p2	BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr11_-_18548363_18548502	0.020561	SOX2.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg19_v1_chr10_+_104179570_104179588	0.0205562	SOX2.p2	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15	BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15
hg19_v1_chr22_-_20104428_20104538	0.020546	SOX2.p2	BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr3_-_93782066_93782066	0.0204944	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr1_-_183387501_183387736	0.0204386	SOX2.p2	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2
hg19_v1_chr11_-_61560052_61560088	0.0203734	SOX2.p2	BC002750|C11orf10|746|chromosome 11 open reading frame 10	AF085986|C11orf10|746|chromosome 11 open reading frame 10	AK291683|C11orf10|746|chromosome 11 open reading frame 10	AF086763|C11orf10|746|chromosome 11 open reading frame 10	BC015968|C11orf10|746|chromosome 11 open reading frame 10	AF070661|C11orf10|746|chromosome 11 open reading frame 10	NM_014206|C11orf10|746|chromosome 11 open reading frame 10
hg19_v1_chr1_+_36748164_36748236	0.0203185	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg19_v1_chr2_-_110873353_110873457	0.0202633	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg19_v1_chr15_-_50647385_50647400	0.0202158	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr10_+_98064084_98064252	0.0202125	SOX2.p2	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal	NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal	AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal	AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal	M26144|DNTT|1791|deoxynucleotidyltransferase, terminal	BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal	AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal	DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal
hg19_v1_chr7_+_142960588_142960614	0.0202038	SOX2.p2	AK289570|GSTK1|373156|glutathione S-transferase kappa 1	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1
hg19_v1_chr3_-_57582866_57583075	0.0201112	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chrX_+_47229981_47230066	0.0200646	SOX2.p2	U28687|ZNF157|7712|zinc finger protein 157	NM_003446|ZNF157|7712|zinc finger protein 157	BC075003|ZNF157|7712|zinc finger protein 157	EU446919|ZNF157|7712|zinc finger protein 157
hg19_v1_chrX_+_30261847_30261847	0.0198503	SOX2.p2	AK314977|MAGEB1|4112|melanoma antigen family B, 1	NM_002363|MAGEB1|4112|melanoma antigen family B, 1	NM_177415|MAGEB1|4112|melanoma antigen family B, 1	X82539|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr16_+_6069094_6069356	0.0197415	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v1_chr7_+_44836166_44836268	0.0197213	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr6_-_53213586_53213693	0.0196953	SOX2.p2	AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr6_-_11382501_11382580	0.0196804	SOX2.p2	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg19_v1_chr2_+_234959345_234959430	0.0196771	SOX2.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg19_v1_chr1_+_16767166_16767203	0.0196096	SOX2.p2	NM_001145277|NECAP2|55707|NECAP endocytosis associated 2	NM_001145278|NECAP2|55707|NECAP endocytosis associated 2	NM_018090|NECAP2|55707|NECAP endocytosis associated 2
hg19_v1_chr4_+_106473776_106473788	0.0194326	SOX2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg19_v1_chr14_+_72399149_72399158	0.0194243	SOX2.p2	AK294486|RGS6|9628|regulator of G-protein signaling 6	NM_001204424|RGS6|9628|regulator of G-protein signaling 6
hg19_v1_chr4_+_41540187_41540224	0.0194176	SOX2.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg19_v1_chr8_-_23261632_23261666	0.0194092	SOX2.p2	AK222477|LOXL2|4017|lysyl oxidase-like 2	AK312266|LOXL2|4017|lysyl oxidase-like 2	BC020481|LOXL2|4017|lysyl oxidase-like 2	AK293292|LOXL2|4017|lysyl oxidase-like 2
hg19_v1_chr11_+_94800316_94800372	0.0194084	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr5_+_140593508_140593537	0.0193936	SOX2.p2	AK021915|PCDHB13|56123|protocadherin beta 13	NM_018933|PCDHB13|56123|protocadherin beta 13	AY358427|PCDHB13|56123|protocadherin beta 13	AK296151|PCDHB13|56123|protocadherin beta 13	AK292821|PCDHB13|56123|protocadherin beta 13	BC033068|PCDHB13|56123|protocadherin beta 13	BC051348|PCDHB13|56123|protocadherin beta 13	BC071934|PCDHB13|56123|protocadherin beta 13
hg19_v1_chr1_-_21113147_21113158	0.019343	SOX2.p2	AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr6_-_34101272_34101532	0.0193348	SOX2.p2	EU432124|GRM4|2914|glutamate receptor, metabotropic 4	HQ258665|GRM4|2914|glutamate receptor, metabotropic 4	HQ258669|GRM4|2914|glutamate receptor, metabotropic 4	U92457|GRM4|2914|glutamate receptor, metabotropic 4	BC130526|GRM4|2914|glutamate receptor, metabotropic 4	BC130528|GRM4|2914|glutamate receptor, metabotropic 4	BC144057|GRM4|2914|glutamate receptor, metabotropic 4	NM_000841|GRM4|2914|glutamate receptor, metabotropic 4	X80818|GRM4|2914|glutamate receptor, metabotropic 4
hg19_v1_chr1_-_3566563_3566670	0.0192522	SOX2.p2	AB034912|WRAP73|49856|WD repeat containing, antisense to TP73	AK000437|WRAP73|49856|WD repeat containing, antisense to TP73	AK225525|WRAP73|49856|WD repeat containing, antisense to TP73	BC002611|WRAP73|49856|WD repeat containing, antisense to TP73	BC086311|WRAP73|49856|WD repeat containing, antisense to TP73	AK302397|WRAP73|49856|WD repeat containing, antisense to TP73	NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73
hg19_v1_chr9_+_137772653_137772667	0.0192197	SOX2.p2	AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)
hg19_v1_chr15_-_65360175_65360288	0.0191849	SOX2.p2	AK314914|RASL12|51285|RAS-like, family 12	AK296261|RASL12|51285|RAS-like, family 12	AF233588|RASL12|51285|RAS-like, family 12
hg19_v1_chr10_+_97471535_97471535	0.0191453	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr1_-_108742738_108742802	0.0191375	SOX2.p2	AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v1_chr19_-_44124013_44124013	0.0190596	SOX2.p2	NM_182498|ZNF428|126299|zinc finger protein 428
hg19_v1_chr4_-_83350452_83350547	0.019003	SOX2.p2	D89678|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AK300122|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AY453824|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	AB066484|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg19_v1_chr17_-_79829174_79829235	0.0190007	SOX2.p2	BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v1_chr20_+_30945988_30946353	0.0189541	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg19_v1_chr8_+_23145574_23145620	0.0188995	SOX2.p2	NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1	AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1
hg19_v1_chr12_-_53558276_53558276	0.0188629	SOX2.p2	AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase	NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase
hg19_v1_chr19_+_9938555_9938580	0.0188018	SOX2.p2	NM_001048241|UBL5|59286|ubiquitin-like 5	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg19_v1_chr11_+_118175294_118175667	0.0187857	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg19_v1_chr6_-_32160289_32160441	0.0187763	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg19_v1_chr14_+_62162042_62162338	0.0187574	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v1_chr17_-_34270670_34270702	0.0187437	SOX2.p2	BC054481|LYZL6|57151|lysozyme-like 6	NM_001199951|LYZL6|57151|lysozyme-like 6
hg19_v1_chr12_+_69004710_69004740	0.0187427	SOX2.p2	AL080212|RAP1B|5908|RAP1B, member of RAS oncogene family	AK311559|RAP1B|5908|RAP1B, member of RAS oncogene family	BC095467|RAP1B|5908|RAP1B, member of RAS oncogene family	AB062128|RAP1B|5908|RAP1B, member of RAS oncogene family	BC000176|RAP1B|5908|RAP1B, member of RAS oncogene family
hg19_v1_chr1_+_19971865_19971865	0.0187246	SOX2.p2	AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr6_+_42123143_42123183	0.0186638	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg19_v1_chr1_+_19972259_19972259	0.0185681	SOX2.p2	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1
hg19_v1_chr2_+_201676597_201676632	0.0185612	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg19_v1_chr19_+_41771013_41771069	0.018508	SOX2.p2	AK297127|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chrX_-_15288588_15288588	0.018445	SOX2.p2	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9	NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9
hg19_v1_chr22_+_21271940_21272066	0.0183937	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg19_v1_chr8_-_121824015_121824111	0.018295	SOX2.p2	
hg19_v1_chr12_+_58138663_58138937	0.0182508	SOX2.p2	AK315765|TSPAN31|6302|tetraspanin 31	NM_005981|TSPAN31|6302|tetraspanin 31	BX647402|TSPAN31|6302|tetraspanin 31	BC010377|TSPAN31|6302|tetraspanin 31	U01160|TSPAN31|6302|tetraspanin 31	AK294128|TSPAN31|6302|tetraspanin 31	CR407647|TSPAN31|6302|tetraspanin 31	DQ892877|TSPAN31|6302|tetraspanin 31	DQ896127|TSPAN31|6302|tetraspanin 31
hg19_v1_chr2_+_172821874_172822000	0.0182025	SOX2.p2	BC018682|HAT1|8520|histone acetyltransferase 1
hg19_v1_chr14_+_79745653_79745755	0.0181957	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg19_v1_chr9_-_127905715_127905868	0.018137	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg19_v1_chr17_-_34266359_34266559	0.0181221	SOX2.p2	AY742214|LYZL6|57151|lysozyme-like 6	AY359018|LYZL6|57151|lysozyme-like 6	NM_020426|LYZL6|57151|lysozyme-like 6
hg19_v1_chr17_+_59477473_59477519	0.0181107	SOX2.p2	U28049|TBX2|6909|T-box 2
hg19_v1_chr1_-_207119707_207119815	0.0180607	SOX2.p2	BC110494|PIGR|5284|polymeric immunoglobulin receptor	BC110495|PIGR|5284|polymeric immunoglobulin receptor	CR749533|PIGR|5284|polymeric immunoglobulin receptor	S62403|PIGR|5284|polymeric immunoglobulin receptor	AF272149|PIGR|5284|polymeric immunoglobulin receptor	X73079|PIGR|5284|polymeric immunoglobulin receptor	AK225471|PIGR|5284|polymeric immunoglobulin receptor	NM_002644|PIGR|5284|polymeric immunoglobulin receptor
hg19_v1_chr1_+_25071906_25071960	0.0179643	SOX2.p2	AK315051|CLIC4|25932|chloride intracellular channel 4	AK301466|CLIC4|25932|chloride intracellular channel 4	AK307142|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr19_-_50432952_50433054	0.0179529	SOX2.p2	NM_016553|NUP62|23636|nucleoporin 62kDa
hg19_v1_chr6_+_30594607_30594779	0.0178808	SOX2.p2	NM_024909|ATAT1|79969|alpha tubulin acetyltransferase 1	BC006105|ATAT1|79969|alpha tubulin acetyltransferase 1	AK023220|ATAT1|79969|alpha tubulin acetyltransferase 1	AK298743|ATAT1|79969|alpha tubulin acetyltransferase 1	AK225107|ATAT1|79969|alpha tubulin acetyltransferase 1	AB075512|ATAT1|79969|alpha tubulin acetyltransferase 1	BC047303|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001031722|ATAT1|79969|alpha tubulin acetyltransferase 1	NM_001190724|ATAT1|79969|alpha tubulin acetyltransferase 1	AL833858|ATAT1|79969|alpha tubulin acetyltransferase 1	BC025755|ATAT1|79969|alpha tubulin acetyltransferase 1	AK297661|ATAT1|79969|alpha tubulin acetyltransferase 1
hg19_v1_chr4_+_54292035_54292107	0.0177918	SOX2.p2	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg19_v1_chr18_+_63417487_63417487	0.0177862	SOX2.p2	AJ007611|CDH7|1005|cadherin 7, type 2	NM_033646|CDH7|1005|cadherin 7, type 2
hg19_v1_chr10_+_86131546_86131691	0.0177764	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg19_v1_chr9_-_139292888_139292888	0.0177595	SOX2.p2	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa
hg19_v1_chr8_+_85095452_85095466	0.0176797	SOX2.p2	NM_001100392|RALYL|138046|RALY RNA binding protein-like	NM_001100393|RALYL|138046|RALY RNA binding protein-like
hg19_v1_chr17_+_2240795_2241009	0.0176313	SOX2.p2	NM_014853|SGSM2|9905|small G protein signaling modulator 2	AB007857|SGSM2|9905|small G protein signaling modulator 2	NM_001098509|SGSM2|9905|small G protein signaling modulator 2	BC039204|SGSM2|9905|small G protein signaling modulator 2	AK294955|SGSM2|9905|small G protein signaling modulator 2	AB275762|SGSM2|9905|small G protein signaling modulator 2	AB449878|SGSM2|9905|small G protein signaling modulator 2	AK304263|SGSM2|9905|small G protein signaling modulator 2
hg19_v1_chr15_-_65360297_65360387	0.0175878	SOX2.p2	BC053734|RASL12|51285|RAS-like, family 12	NM_016563|RASL12|51285|RAS-like, family 12
hg19_v1_chr14_-_22005035_22005336	0.0175688	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr2_+_148602050_148602184	0.017562	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chr4_-_88312221_88312322	0.0175099	SOX2.p2	AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg19_v1_chrY_+_6778623_6778737	0.0174857	SOX2.p2	AK056903|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332220|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332221|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AF332222|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_033284|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_134258|TBL1Y|90665|transducin (beta)-like 1, Y-linked	NM_134259|TBL1Y|90665|transducin (beta)-like 1, Y-linked	AK298210|TBL1Y|90665|transducin (beta)-like 1, Y-linked
hg19_v1_chrX_+_38211735_38211913	0.0174222	SOX2.p2	BC107153|OTC|5009|ornithine carbamoyltransferase	BC107154|OTC|5009|ornithine carbamoyltransferase	NM_000531|OTC|5009|ornithine carbamoyltransferase	BC114496|OTC|5009|ornithine carbamoyltransferase	AK292757|OTC|5009|ornithine carbamoyltransferase	K02100|OTC|5009|ornithine carbamoyltransferase	BC074745|OTC|5009|ornithine carbamoyltransferase
hg19_v1_chr11_+_118992232_118992335	0.0173678	SOX2.p2	NM_001243259|HINFP|25988|histone H4 transcription factor	NM_015517|HINFP|25988|histone H4 transcription factor	NM_198971|HINFP|25988|histone H4 transcription factor	AK300288|HINFP|25988|histone H4 transcription factor	BC017234|HINFP|25988|histone H4 transcription factor	AK056362|HINFP|25988|histone H4 transcription factor	BC012856|HINFP|25988|histone H4 transcription factor	AK301452|HINFP|25988|histone H4 transcription factor
hg19_v1_chr5_+_180415844_180415958	0.0173543	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg19_v1_chr17_-_62914902_62914902	0.0173433	SOX2.p2	AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3	NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg19_v1_chr19_+_41770349_41770527	0.0172548	SOX2.p2	BC014232|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC027713|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	BC004242|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831487|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	EU831574|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr15_-_62352565_62352663	0.0172519	SOX2.p2	AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)
hg19_v1_chr5_-_150138554_150138656	0.0172482	SOX2.p2	DQ892339|DCTN4|51164|dynactin 4 (p62)	DQ895544|DCTN4|51164|dynactin 4 (p62)	AF195120|DCTN4|51164|dynactin 4 (p62)	AK000299|DCTN4|51164|dynactin 4 (p62)	AK296787|DCTN4|51164|dynactin 4 (p62)	BC026323|DCTN4|51164|dynactin 4 (p62)	AK311693|DCTN4|51164|dynactin 4 (p62)	AK307757|DCTN4|51164|dynactin 4 (p62)	NM_001135643|DCTN4|51164|dynactin 4 (p62)	NM_016221|DCTN4|51164|dynactin 4 (p62)
hg19_v1_chr21_-_30257611_30257715	0.0172045	SOX2.p2	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)	NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)
hg19_v1_chr5_+_137514753_137514878	0.0171889	SOX2.p2	AK296879|KIF20A|10112|kinesin family member 20A	AK025790|KIF20A|10112|kinesin family member 20A	AF153329|KIF20A|10112|kinesin family member 20A	BC012999|KIF20A|10112|kinesin family member 20A
hg19_v1_chr16_+_58498216_58498308	0.017173	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg19_v1_chr17_-_2996289_2996289	0.0171689	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg19_v1_chr5_+_65372744_65372866	0.0171682	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr19_+_40854529_40854652	0.0171178	SOX2.p2	BC036327|PLD3|23646|phospholipase D family, member 3	AK293690|PLD3|23646|phospholipase D family, member 3	BC096820|PLD3|23646|phospholipase D family, member 3
hg19_v1_chr1_-_1167273_1167346	0.0171173	SOX2.p2	BC011244|SDF4|51150|stromal cell derived factor 4	AK299810|SDF4|51150|stromal cell derived factor 4	BC006211|SDF4|51150|stromal cell derived factor 4	BC008917|SDF4|51150|stromal cell derived factor 4
hg19_v1_chr1_-_8003224_8003224	0.0170766	SOX2.p2	NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9
hg19_v1_chr18_-_54305839_54305990	0.0170587	SOX2.p2	BC001156|TXNL1|9352|thioredoxin-like 1	AF003938|TXNL1|9352|thioredoxin-like 1	NM_004786|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr22_+_39077960_39077974	0.0170433	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr8_+_23104153_23104332	0.0170081	SOX2.p2	AK092500|CHMP7|91782|charged multivesicular body protein 7	AL833843|CHMP7|91782|charged multivesicular body protein 7	BC019110|CHMP7|91782|charged multivesicular body protein 7	AK296592|CHMP7|91782|charged multivesicular body protein 7	BC004344|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr5_+_169780880_169780880	0.0168984	SOX2.p2	DQ148476|KCNIP1|30820|Kv channel interacting protein 1	NM_001034838|KCNIP1|30820|Kv channel interacting protein 1
hg19_v1_chr10_-_99052358_99052390	0.0168906	SOX2.p2	AK090447|ARHGAP19|84986|Rho GTPase activating protein 19	AK303055|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr10_-_99052391_99052427	0.0168864	SOX2.p2	AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough	DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19	BX648189|ARHGAP19|84986|Rho GTPase activating protein 19	BC113888|ARHGAP19|84986|Rho GTPase activating protein 19	BC114490|ARHGAP19|84986|Rho GTPase activating protein 19	CR749412|ARHGAP19|84986|Rho GTPase activating protein 19
hg19_v1_chr5_+_85913755_85913761	0.0168652	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr12_-_120907535_120907613	0.0168425	SOX2.p2	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9
hg19_v1_chr1_-_169764030_169764034	0.0168225	SOX2.p2	AL035369|METTL18|92342|methyltransferase like 18	NM_033418|METTL18|92342|methyltransferase like 18	AK313909|METTL18|92342|methyltransferase like 18
hg19_v1_chr22_-_41682187_41682228	0.0167954	SOX2.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg19_v1_chrX_-_71792610_71792718	0.0167867	SOX2.p2	EU446822|HDAC8|55869|histone deacetylase 8	EU832800|HDAC8|55869|histone deacetylase 8	GQ129378|HDAC8|55869|histone deacetylase 8	AF245664|HDAC8|55869|histone deacetylase 8	AY429539|HDAC8|55869|histone deacetylase 8	BC050433|HDAC8|55869|histone deacetylase 8	AK300895|HDAC8|55869|histone deacetylase 8	AJ277724|HDAC8|55869|histone deacetylase 8	AK294903|HDAC8|55869|histone deacetylase 8	AF212246|HDAC8|55869|histone deacetylase 8	AK298767|HDAC8|55869|histone deacetylase 8
hg19_v1_chr5_+_140800536_140800602	0.0167856	SOX2.p2	NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11	NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11
hg19_v1_chr13_-_60587298_60587342	0.016785	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg19_v1_chr4_-_41216455_41216683	0.016778	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v1_chr13_+_96085852_96085857	0.0167666	SOX2.p2	NM_001160100|CLDN10|9071|claudin 10	NM_182848|CLDN10|9071|claudin 10	AK055855|CLDN10|9071|claudin 10
hg19_v1_chr15_-_65282093_65282176	0.0167466	SOX2.p2	AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr17_-_74099603_74099845	0.0167009	SOX2.p2	AK295871|EXOC7|23265|exocyst complex component 7	FJ457119|EXOC7|23265|exocyst complex component 7	FJ457120|EXOC7|23265|exocyst complex component 7	AK023832|EXOC7|23265|exocyst complex component 7	BC018466|EXOC7|23265|exocyst complex component 7	AB028990|EXOC7|23265|exocyst complex component 7	BC011045|EXOC7|23265|exocyst complex component 7	AK128278|EXOC7|23265|exocyst complex component 7	BC029432|EXOC7|23265|exocyst complex component 7	AK022397|EXOC7|23265|exocyst complex component 7	AL834324|EXOC7|23265|exocyst complex component 7
hg19_v1_chr5_+_85913762_85913872	0.016698	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc
hg19_v1_chr2_+_181845803_181845852	0.0166117	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3
hg19_v1_chr3_+_184038050_184038206	0.0165671	SOX2.p2	D12686|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	NM_004953|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr11_-_14380030_14380072	0.0165431	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg19_v1_chr19_+_18794487_18794559	0.0165238	SOX2.p2	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1	BC028050|CRTC1|23373|CREB regulated transcription coactivator 1	DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1	DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1	AB014516|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr18_-_64271215_64271408	0.0164795	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg19_v1_chr8_+_77593522_77593534	0.016408	SOX2.p2	AB083343|ZFHX4|79776|zinc finger homeobox 4
hg19_v1_chr9_-_15510899_15511022	0.016385	SOX2.p2	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1	AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1	BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1	NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1
hg19_v1_chr11_-_62473502_62473890	0.016379	SOX2.p2	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v1_chr1_+_115572414_115572414	0.0163653	SOX2.p2	NM_000549|TSHB|7252|thyroid stimulating hormone, beta
hg19_v1_chr19_+_56166418_56166470	0.0163547	SOX2.p2	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2
hg19_v1_chr21_-_36231794_36231878	0.0163522	SOX2.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg19_v1_chr22_+_44422183_44422183	0.0163078	SOX2.p2	AK308443|PARVB|29780|parvin, beta	NM_001243386|PARVB|29780|parvin, beta
hg19_v1_chr1_+_29063443_29063632	0.0162742	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg19_v1_chr12_+_75784878_75784893	0.0162142	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg19_v1_chr17_+_30677178_30677185	0.0161819	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg19_v1_chr11_-_65625737_65625803	0.0161403	SOX2.p2	NM_005507|CFL1|1072|cofilin 1 (non-muscle)
hg19_v1_chr1_+_43855549_43855583	0.0161196	SOX2.p2	BC017576|SZT2|23334|seizure threshold 2 homolog (mouse)	NM_015284|SZT2|23334|seizure threshold 2 homolog (mouse)
hg19_v1_chr4_-_83294806_83294938	0.0161035	SOX2.p2	AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr6_+_52935770_52935770	0.0160523	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg19_v1_chr3_-_129158675_129158761	0.0159268	SOX2.p2	AM180876|MBD4|8930|methyl-CpG binding domain protein 4	CR450305|MBD4|8930|methyl-CpG binding domain protein 4	BC034463|MBD4|8930|methyl-CpG binding domain protein 4	BC011752|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr10_-_27443138_27443277	0.0159178	SOX2.p2	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr4_-_88312329_88312454	0.0159034	SOX2.p2	AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11
hg19_v1_chr1_+_12977444_12977512	0.0158734	SOX2.p2	BC144565|PRAMEF7|441871|PRAME family member 7	NM_001012277|PRAMEF7|441871|PRAME family member 7
hg19_v1_chr3_-_127541160_127541700	0.0158685	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg19_v1_chr7_+_44836309_44836323	0.0158344	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg19_v1_chr12_-_45307710_45307710	0.0157093	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr12_+_32112381_32112407	0.0156708	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg19_v1_chr17_+_30677138_30677175	0.0156574	SOX2.p2	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg19_v1_chr1_-_21377387_21377394	0.0155816	SOX2.p2	BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg19_v1_chr20_+_62152101_62152166	0.0154715	SOX2.p2	BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)
hg19_v1_chr1_-_200379072_200379162	0.0154376	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg19_v1_chr2_+_70142303_70142462	0.0153962	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1	HQ258749|MXD1|4084|MAX dimerization protein 1
hg19_v1_chrX_-_15332680_15332680	0.0153766	SOX2.p2	BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg19_v1_chr5_+_133707105_133707288	0.0153252	SOX2.p2	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B
hg19_v1_chr9_-_125590809_125590934	0.0153025	SOX2.p2	BC017227|PDCL|5082|phosducin-like	AL117602|PDCL|5082|phosducin-like	AF031463|PDCL|5082|phosducin-like	AK313429|PDCL|5082|phosducin-like	NM_005388|PDCL|5082|phosducin-like
hg19_v1_chr10_-_27443279_27443304	0.0152829	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr6_-_108582124_108582163	0.0152395	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg19_v1_chr4_+_74347461_74347479	0.0151944	SOX2.p2	AK290556|AFM|173|afamin	NM_001133|AFM|173|afamin	BC109020|AFM|173|afamin	BC109021|AFM|173|afamin	L35486|AFM|173|afamin
hg19_v1_chr22_+_39077953_39077957	0.0151374	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg19_v1_chr2_-_172750724_172750843	0.0151265	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg19_v1_chr19_+_16178170_16178350	0.015126	SOX2.p2	NM_001145160|TPM4|7171|tropomyosin 4	AK023385|TPM4|7171|tropomyosin 4
hg19_v1_chr19_+_45394459_45394509	0.0151072	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v1_chr12_-_121734543_121734708	0.015085	SOX2.p2	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v1_chr4_+_170541728_170541987	0.0150784	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg19_v1_chr1_-_3447974_3448011	0.0150742	SOX2.p2	AB011539|MEGF6|1953|multiple EGF-like-domains 6
hg19_v1_chr7_+_73498106_73498146	0.0150154	SOX2.p2	AK290162|LIMK1|3984|LIM domain kinase 1	NM_002314|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr1_+_25071967_25072044	0.0149097	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg19_v1_chr22_-_30867944_30868033	0.0148433	SOX2.p2	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)
hg19_v1_chr10_-_104262404_104262511	0.0148094	SOX2.p2	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)	NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v1_chr12_-_57634474_57634526	0.0148069	SOX2.p2	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v1_chr2_+_176969233_176969249	0.0147757	SOX2.p2	
hg19_v1_chr17_-_35969401_35969500	0.0147176	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg19_v1_chr12_+_21525801_21525855	0.014712	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg19_v1_chr12_-_49245904_49245961	0.0147098	SOX2.p2	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
hg19_v1_chr4_+_113558119_113558119	0.0146083	SOX2.p2	NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chr5_-_172755418_172755468	0.01458	SOX2.p2	AK075406|STC2|8614|stanniocalcin 2	BC000658|STC2|8614|stanniocalcin 2	AK027390|STC2|8614|stanniocalcin 2	AK027663|STC2|8614|stanniocalcin 2
hg19_v1_chr1_-_161102367_161102382	0.0145518	SOX2.p2	BC016724|DEDD|9191|death effector domain containing	AK296629|DEDD|9191|death effector domain containing	AK001497|DEDD|9191|death effector domain containing
hg19_v1_chr21_-_40720938_40721003	0.0145465	SOX2.p2	BC071643|HMGN1|3150|high mobility group nucleosome binding domain 1	BC023984|HMGN1|3150|high mobility group nucleosome binding domain 1	BC072672|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070154|HMGN1|3150|high mobility group nucleosome binding domain 1	BC000075|HMGN1|3150|high mobility group nucleosome binding domain 1	AB209245|HMGN1|3150|high mobility group nucleosome binding domain 1	BC106080|HMGN1|3150|high mobility group nucleosome binding domain 1	BC070153|HMGN1|3150|high mobility group nucleosome binding domain 1	J02621|HMGN1|3150|high mobility group nucleosome binding domain 1	AK315410|HMGN1|3150|high mobility group nucleosome binding domain 1
hg19_v1_chr19_+_21324826_21324887	0.0145212	SOX2.p2	BX647597|ZNF431|170959|zinc finger protein 431	AK308127|ZNF431|170959|zinc finger protein 431	NM_133473|ZNF431|170959|zinc finger protein 431	AK293072|ZNF431|170959|zinc finger protein 431	AB075849|ZNF431|170959|zinc finger protein 431	BC040506|ZNF431|170959|zinc finger protein 431
hg19_v1_chr3_-_129158779_129158816	0.0144658	SOX2.p2	AK312878|MBD4|8930|methyl-CpG binding domain protein 4	AF114784|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chr10_-_33247178_33247297	0.0144552	SOX2.p2	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v1_chr17_-_46703613_46703964	0.0144315	SOX2.p2	AK056123|HOXB9|3219|homeobox B9	AK315480|HOXB9|3219|homeobox B9	BC015565|HOXB9|3219|homeobox B9	AK056414|HOXB9|3219|homeobox B9	NM_024017|HOXB9|3219|homeobox B9
hg19_v1_chr12_+_69979447_69979652	0.0143987	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg19_v1_chr12_-_113909876_113909876	0.0143475	SOX2.p2	AF291181|LHX5|64211|LIM homeobox 5	NM_022363|LHX5|64211|LIM homeobox 5
hg19_v1_chr11_-_64545231_64545231	0.0143351	SOX2.p2	AK293753|SF1|7536|splicing factor 1	NM_001178031|SF1|7536|splicing factor 1
hg19_v1_chr1_+_205197031_205197136	0.0143271	SOX2.p2	AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2	NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2	AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr2_-_74607425_74607481	0.0143158	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg19_v1_chr12_-_18243052_18243113	0.0142831	SOX2.p2	AK026308|RERGL|79785|RERG/RAS-like	BC042888|RERGL|79785|RERG/RAS-like	NM_024730|RERGL|79785|RERG/RAS-like
hg19_v1_chr5_+_140792507_140792742	0.0142543	SOX2.p2	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10	BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10	AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10	NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10
hg19_v1_chr11_+_64889699_64889801	0.0142396	SOX2.p2	NM_004927|MRPL49|740|mitochondrial ribosomal protein L49	AK129986|MRPL49|740|mitochondrial ribosomal protein L49	AK311821|MRPL49|740|mitochondrial ribosomal protein L49	AK129795|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr1_-_85741992_85742279	0.0142373	SOX2.p2	AF105066|BCL10|8915|B-cell CLL/lymphoma 10	AF127386|BCL10|8915|B-cell CLL/lymphoma 10	EF189176|BCL10|8915|B-cell CLL/lymphoma 10	BC053617|BCL10|8915|B-cell CLL/lymphoma 10	BX647306|BCL10|8915|B-cell CLL/lymphoma 10	AK291346|BCL10|8915|B-cell CLL/lymphoma 10	AF100338|BCL10|8915|B-cell CLL/lymphoma 10	AF057700|BCL10|8915|B-cell CLL/lymphoma 10	AF134395|BCL10|8915|B-cell CLL/lymphoma 10
hg19_v1_chr4_-_186456580_186456711	0.0142307	SOX2.p2	AK129863|PDLIM3|27295|PDZ and LIM domain 3	BT007341|PDLIM3|27295|PDZ and LIM domain 3	AK222966|PDLIM3|27295|PDZ and LIM domain 3	AF002280|PDLIM3|27295|PDZ and LIM domain 3	AF002282|PDLIM3|27295|PDZ and LIM domain 3	BC027870|PDLIM3|27295|PDZ and LIM domain 3	AF039018|PDLIM3|27295|PDZ and LIM domain 3	BC001017|PDLIM3|27295|PDZ and LIM domain 3	AK313253|PDLIM3|27295|PDZ and LIM domain 3	NM_001114107|PDLIM3|27295|PDZ and LIM domain 3	NM_014476|PDLIM3|27295|PDZ and LIM domain 3
hg19_v1_chr10_+_60094712_60094961	0.0141262	SOX2.p2	NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1
hg19_v1_chr6_+_123110345_123110490	0.0141206	SOX2.p2	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg19_v1_chr22_+_38597938_38598017	0.0141139	SOX2.p2	NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)
hg19_v1_chr10_+_97515408_97515672	0.0140461	SOX2.p2	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v1_chr3_-_129158849_129158894	0.0139794	SOX2.p2	AF532602|MBD4|8930|methyl-CpG binding domain protein 4	AF072250|MBD4|8930|methyl-CpG binding domain protein 4	NM_003925|MBD4|8930|methyl-CpG binding domain protein 4	AK303013|MBD4|8930|methyl-CpG binding domain protein 4
hg19_v1_chrX_+_46696346_46696408	0.0139472	SOX2.p2	NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)
hg19_v1_chr17_+_58677489_58677599	0.0139337	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v1_chr20_-_3996035_3996295	0.0138958	SOX2.p2	AL096778|RNF24|11237|ring finger protein 24	NM_007219|RNF24|11237|ring finger protein 24	BC039584|RNF24|11237|ring finger protein 24	BC000213|RNF24|11237|ring finger protein 24	NM_001134337|RNF24|11237|ring finger protein 24	NM_001134338|RNF24|11237|ring finger protein 24
hg19_v1_chr5_+_137514416_137514416	0.013892	SOX2.p2	NM_005733|KIF20A|10112|kinesin family member 20A
hg19_v1_chr2_+_183580960_183581189	0.0138718	SOX2.p2	AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v1_chr8_+_19796581_19796723	0.0138235	SOX2.p2	NM_000237|LPL|4023|lipoprotein lipase	S78266|LPL|4023|lipoprotein lipase
hg19_v1_chr1_+_155294217_155294367	0.0137995	SOX2.p2	AK298730|RUSC1|23623|RUN and SH3 domain containing 1	NM_014328|RUSC1|23623|RUN and SH3 domain containing 1	AK093777|RUSC1|23623|RUN and SH3 domain containing 1	BC001045|RUSC1|23623|RUN and SH3 domain containing 1	AK307736|RUSC1|23623|RUN and SH3 domain containing 1	AK074485|RUSC1|23623|RUN and SH3 domain containing 1	AB026894|RUSC1|23623|RUN and SH3 domain containing 1	AK074982|RUSC1|23623|RUN and SH3 domain containing 1	BC028055|RUSC1|23623|RUN and SH3 domain containing 1	BC004293|RUSC1|23623|RUN and SH3 domain containing 1	BX640612|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr15_-_41694619_41694705	0.0137189	SOX2.p2	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1
hg19_v1_chr2_+_96068423_96068535	0.0136542	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg19_v1_chr21_-_19775958_19775972	0.0136529	SOX2.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg19_v1_chr19_-_18548118_18548118	0.0136442	SOX2.p2	AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chr8_-_105601124_105601226	0.0136252	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12
hg19_v1_chr11_-_64545933_64545956	0.0135982	SOX2.p2	BC038446|SF1|7536|splicing factor 1	NM_001178030|SF1|7536|splicing factor 1
hg19_v1_chr7_-_93633527_93633702	0.0135567	SOX2.p2	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)
hg19_v1_chr15_-_74495399_74495445	0.0135201	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg19_v1_chr14_-_74180341_74181182	0.013508	SOX2.p2	CR457112|PNMA1|9240|paraneoplastic antigen MA1	BC039577|PNMA1|9240|paraneoplastic antigen MA1	AK290980|PNMA1|9240|paraneoplastic antigen MA1	AF320308|PNMA1|9240|paraneoplastic antigen MA1	BC007712|PNMA1|9240|paraneoplastic antigen MA1	NM_006029|PNMA1|9240|paraneoplastic antigen MA1
hg19_v1_chr7_-_26232148_26232154	0.0134203	SOX2.p2	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v1_chr11_+_73019662_73019668	0.0134093	SOX2.p2	BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17	AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v1_chr16_+_72698996_72699132	0.0134059	SOX2.p2	
hg19_v1_chr6_-_49712055_49712167	0.0133457	SOX2.p2	BC069602|CRISP3|10321|cysteine-rich secretory protein 3	X95240|CRISP3|10321|cysteine-rich secretory protein 3	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg19_v1_chr1_+_25598883_25599101	0.0133101	SOX2.p2	AK297151|RHD|6007|Rh blood group, D antigen	NM_001127691|RHD|6007|Rh blood group, D antigen	NM_016124|RHD|6007|Rh blood group, D antigen	X63094|RHD|6007|Rh blood group, D antigen	BC139922|RHD|6007|Rh blood group, D antigen	AF510069|RHD|6007|Rh blood group, D antigen	AF510070|RHD|6007|Rh blood group, D antigen	AF312679|RHD|6007|Rh blood group, D antigen	Z97026|RHD|6007|Rh blood group, D antigen	DQ451878|RHD|6007|Rh blood group, D antigen	X63097|RHD|6007|Rh blood group, D antigen	AB018966|RHD|6007|Rh blood group, D antigen	AB018967|RHD|6007|Rh blood group, D antigen	AB018968|RHD|6007|Rh blood group, D antigen	AB018969|RHD|6007|Rh blood group, D antigen	AB037270|RHD|6007|Rh blood group, D antigen	AB046420|RHD|6007|Rh blood group, D antigen	AB049754|RHD|6007|Rh blood group, D antigen	AF037626|RHD|6007|Rh blood group, D antigen	AF177938|RHD|6007|Rh blood group, D antigen	AF187846|RHD|6007|Rh blood group, D antigen	AJ704215|RHD|6007|Rh blood group, D antigen	AM183924|RHD|6007|Rh blood group, D antigen	AY449381|RHD|6007|Rh blood group, D antigen	AY449382|RHD|6007|Rh blood group, D antigen	AY449383|RHD|6007|Rh blood group, D antigen	AY449384|RHD|6007|Rh blood group, D antigen	AY449385|RHD|6007|Rh blood group, D antigen	AY751491|RHD|6007|Rh blood group, D antigen	AY751492|RHD|6007|Rh blood group, D antigen	AY751493|RHD|6007|Rh blood group, D antigen	AY751494|RHD|6007|Rh blood group, D antigen	AY751495|RHD|6007|Rh blood group, D antigen	AY751496|RHD|6007|Rh blood group, D antigen	FR745438|RHD|6007|Rh blood group, D antigen	FR745439|RHD|6007|Rh blood group, D antigen	FR745440|RHD|6007|Rh blood group, D antigen	FR745441|RHD|6007|Rh blood group, D antigen	L08429|RHD|6007|Rh blood group, D antigen	S57971|RHD|6007|Rh blood group, D antigen	S70174|RHD|6007|Rh blood group, D antigen	S73913|RHD|6007|Rh blood group, D antigen	S78509|RHD|6007|Rh blood group, D antigen	S82449|RHD|6007|Rh blood group, D antigen	EU557240|RHD|6007|Rh blood group, D antigen	EU557241|RHD|6007|Rh blood group, D antigen	EU661905|RHD|6007|Rh blood group, D antigen	EU661906|RHD|6007|Rh blood group, D antigen
hg19_v1_chr15_+_101459459_101459566	0.0132788	SOX2.p2	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1	BC068080|LRRK1|79705|leucine-rich repeat kinase 1
hg19_v1_chr15_+_69745156_69745287	0.0131996	SOX2.p2	NM_001003|RPLP1|6176|ribosomal protein, large, P1	NM_213725|RPLP1|6176|ribosomal protein, large, P1	AK130958|RPLP1|6176|ribosomal protein, large, P1	AK026579|RPLP1|6176|ribosomal protein, large, P1	D28366|RPLP1|6176|ribosomal protein, large, P1	M17886|RPLP1|6176|ribosomal protein, large, P1	AY303789|RPLP1|6176|ribosomal protein, large, P1	BC003369|RPLP1|6176|ribosomal protein, large, P1	BC007590|RPLP1|6176|ribosomal protein, large, P1	CR450339|RPLP1|6176|ribosomal protein, large, P1	CR542209|RPLP1|6176|ribosomal protein, large, P1
hg19_v1_chr5_-_176738831_176738938	0.0131624	SOX2.p2	DQ892734|MXD3|83463|MAX dimerization protein 3	DQ895981|MXD3|83463|MAX dimerization protein 3	DQ896213|MXD3|83463|MAX dimerization protein 3	BC041690|MXD3|83463|MAX dimerization protein 3	BC000745|MXD3|83463|MAX dimerization protein 3	BC032586|MXD3|83463|MAX dimerization protein 3	AF114834|MXD3|83463|MAX dimerization protein 3	AK222579|MXD3|83463|MAX dimerization protein 3	AK316468|MXD3|83463|MAX dimerization protein 3	AK057034|MXD3|83463|MAX dimerization protein 3	AK303397|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr8_+_23104120_23104150	0.0131296	SOX2.p2	AK315664|CHMP7|91782|charged multivesicular body protein 7	AK021776|CHMP7|91782|charged multivesicular body protein 7
hg19_v1_chr10_-_123734641_123734702	0.0130911	SOX2.p2	
hg19_v1_chr19_-_44123732_44123767	0.0129746	SOX2.p2	BC015950|ZNF428|126299|zinc finger protein 428	AY257197|ZNF428|126299|zinc finger protein 428	BC045799|ZNF428|126299|zinc finger protein 428
hg19_v1_chr11_-_790103_790125	0.0129624	SOX2.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg19_v1_chr5_+_140723600_140723602	0.0129131	SOX2.p2	AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3	AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3	NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3	BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3
hg19_v1_chr3_+_178866124_178866352	0.0128692	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg19_v1_chr22_-_18256748_18256812	0.0128618	SOX2.p2	AF250233|BID|637|BH3 interacting domain death agonist	AK094795|BID|637|BH3 interacting domain death agonist	BC036364|BID|637|BH3 interacting domain death agonist	NM_001244572|BID|637|BH3 interacting domain death agonist	NM_197966|BID|637|BH3 interacting domain death agonist
hg19_v1_chr21_+_19618191_19618191	0.0128334	SOX2.p2	AK296009|CHODL|140578|chondrolectin	NM_001204174|CHODL|140578|chondrolectin
hg19_v1_chr14_-_80697396_80697396	0.0127955	SOX2.p2	AK292210|DIO2|1734|deiodinase, iodothyronine, type II	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II
hg19_v1_chr3_+_179280738_179280744	0.0127901	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A
hg19_v1_chr7_+_93535819_93535819	0.0127725	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v1_chr2_+_201936461_201936756	0.012754	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v1_chr17_+_61678277_61678442	0.0127538	SOX2.p2	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I
hg19_v1_chr11_+_34073188_34073238	0.0127452	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg19_v1_chr12_+_133657439_133657469	0.0126877	SOX2.p2	U09368|ZNF140|7699|zinc finger protein 140	AK303240|ZNF140|7699|zinc finger protein 140
hg19_v1_chr22_+_27017927_27017935	0.0126762	SOX2.p2	BC069404|CRYBA4|1413|crystallin, beta A4	CR456424|CRYBA4|1413|crystallin, beta A4	NM_001886|CRYBA4|1413|crystallin, beta A4	U59057|CRYBA4|1413|crystallin, beta A4	CU012985|CRYBA4|1413|crystallin, beta A4	CU013273|CRYBA4|1413|crystallin, beta A4	BC096171|CRYBA4|1413|crystallin, beta A4	BC096172|CRYBA4|1413|crystallin, beta A4	BC096173|CRYBA4|1413|crystallin, beta A4	BC096174|CRYBA4|1413|crystallin, beta A4
hg19_v1_chr1_-_156828665_156828711	0.0126633	SOX2.p2	AF064078|INSRR|3645|insulin receptor-related receptor	AK310760|INSRR|3645|insulin receptor-related receptor	NM_014215|INSRR|3645|insulin receptor-related receptor
hg19_v1_chr19_-_18548788_18548965	0.0126249	SOX2.p2	DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1	DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1	AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1	AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1	NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1	AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1	BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1	AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1	BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1	AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1	AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1
hg19_v1_chrX_-_154563735_154563985	0.0125797	SOX2.p2	AM393055|CLIC2|1193|chloride intracellular channel 2	AY191592|CLIC2|1193|chloride intracellular channel 2	DQ892014|CLIC2|1193|chloride intracellular channel 2	DQ895204|CLIC2|1193|chloride intracellular channel 2	BC022305|CLIC2|1193|chloride intracellular channel 2	BC005367|CLIC2|1193|chloride intracellular channel 2	AK292785|CLIC2|1193|chloride intracellular channel 2	Y12696|CLIC2|1193|chloride intracellular channel 2	NM_001289|CLIC2|1193|chloride intracellular channel 2
hg19_v1_chr3_-_116164363_116164384	0.0125562	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg19_v1_chr4_+_30721865_30722133	0.0125125	SOX2.p2	NM_032456|PCDH7|5099|protocadherin 7	AB006755|PCDH7|5099|protocadherin 7	NM_001173523|PCDH7|5099|protocadherin 7	NM_002589|PCDH7|5099|protocadherin 7	NM_032457|PCDH7|5099|protocadherin 7	BC020338|PCDH7|5099|protocadherin 7
hg19_v1_chr1_-_59249687_59249784	0.0125083	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg19_v1_chr11_+_125753508_125753508	0.0124896	SOX2.p2	AK057477|HYLS1|219844|hydrolethalus syndrome 1	NM_145014|HYLS1|219844|hydrolethalus syndrome 1
hg19_v1_chr2_-_75937993_75938110	0.0124422	SOX2.p2	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2	BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2	EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2	AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2	NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2
hg19_v1_chr1_-_1167374_1167410	0.01231	SOX2.p2	AK075352|SDF4|51150|stromal cell derived factor 4	BC022375|SDF4|51150|stromal cell derived factor 4	AK027277|SDF4|51150|stromal cell derived factor 4	AF153686|SDF4|51150|stromal cell derived factor 4	AF178986|SDF4|51150|stromal cell derived factor 4
hg19_v1_chrX_+_77166223_77166262	0.0123024	SOX2.p2	AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chrX_+_49326599_49326609	0.0122643	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr22_+_20105068_20105075	0.0122635	SOX2.p2	X83617|RANBP1|5902|RAN binding protein 1
hg19_v1_chr15_+_49715374_49715458	0.0122457	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7
hg19_v1_chr1_-_21113160_21113184	0.0122202	SOX2.p2	AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3	NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3
hg19_v1_chr1_-_145610869_145610904	0.0122034	SOX2.p2	U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chr2_+_16080639_16080737	0.0121789	SOX2.p2	AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr2_+_16080559_16080569	0.0121721	SOX2.p2	M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)
hg19_v1_chr4_-_69536314_69536493	0.012137	SOX2.p2	U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v1_chr15_+_48498497_48498498	0.0119982	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg19_v1_chr3_+_179280746_179280881	0.0119665	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg19_v1_chrX_+_96138906_96139035	0.0119219	SOX2.p2	NM_013347|RPA4|29935|replication protein A4, 30kDa	U24186|RPA4|29935|replication protein A4, 30kDa	BC069791|RPA4|29935|replication protein A4, 30kDa	BC069808|RPA4|29935|replication protein A4, 30kDa	BC069824|RPA4|29935|replication protein A4, 30kDa	BC104013|RPA4|29935|replication protein A4, 30kDa	BC104014|RPA4|29935|replication protein A4, 30kDa
hg19_v1_chr10_+_105726935_105726994	0.0119168	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg19_v1_chr7_-_42276617_42276617	0.0118248	SOX2.p2	NM_000168|GLI3|2737|GLI family zinc finger 3
hg19_v1_chr9_+_134000939_134001009	0.0117574	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg19_v1_chr9_-_140083034_140083056	0.0117161	SOX2.p2	NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2
hg19_v1_chr21_+_34922923_34923018	0.0116948	SOX2.p2	BC002422|SON|6651|SON DNA binding protein
hg19_v1_chr2_-_162931051_162931062	0.0116472	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg19_v1_chr22_-_42336222_42336222	0.0116373	SOX2.p2	EU035297|CENPM|79019|centromere protein M	NM_001110215|CENPM|79019|centromere protein M
hg19_v1_chr2_-_47403613_47403639	0.0115823	SOX2.p2	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)
hg19_v1_chr12_-_6716475_6716528	0.0115753	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chr19_-_53233134_53233134	0.0115745	SOX2.p2	AK097434|ZNF611|81856|zinc finger protein 611	NM_030972|ZNF611|81856|zinc finger protein 611
hg19_v1_chr17_+_30677187_30677304	0.0115625	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg19_v1_chr19_+_35782988_35783096	0.0115557	SOX2.p2	NM_001199216|MAG|4099|myelin associated glycoprotein	NM_002361|MAG|4099|myelin associated glycoprotein	NM_080600|MAG|4099|myelin associated glycoprotein	AK223562|MAG|4099|myelin associated glycoprotein	BC093045|MAG|4099|myelin associated glycoprotein	BC034042|MAG|4099|myelin associated glycoprotein	AK094545|MAG|4099|myelin associated glycoprotein	AK222649|MAG|4099|myelin associated glycoprotein	AK308976|MAG|4099|myelin associated glycoprotein	M29273|MAG|4099|myelin associated glycoprotein	AK294644|MAG|4099|myelin associated glycoprotein	AK222680|MAG|4099|myelin associated glycoprotein	BC053347|MAG|4099|myelin associated glycoprotein
hg19_v1_chr10_-_33623299_33623608	0.0115507	SOX2.p2	AF016050|NRP1|8829|neuropilin 1	AF018956|NRP1|8829|neuropilin 1	AF145712|NRP1|8829|neuropilin 1	AF280547|NRP1|8829|neuropilin 1	AY249243|NRP1|8829|neuropilin 1	BT006995|NRP1|8829|neuropilin 1	EU831654|NRP1|8829|neuropilin 1	EU831737|NRP1|8829|neuropilin 1	AF268691|NRP1|8829|neuropilin 1	BC007737|NRP1|8829|neuropilin 1	AB209641|NRP1|8829|neuropilin 1	AK292822|NRP1|8829|neuropilin 1	AL833608|NRP1|8829|neuropilin 1	BC007533|NRP1|8829|neuropilin 1
hg19_v1_chr7_+_27779706_27779742	0.0115112	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr17_+_79651052_79651070	0.0114707	SOX2.p2	
hg19_v1_chr1_+_10490158_10490158	0.0114379	SOX2.p2	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough	NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr2_-_3605849_3605909	0.0114081	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg19_v1_chr1_+_151227237_151227258	0.0113656	SOX2.p2	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
hg19_v1_chr4_+_2819888_2819939	0.0113493	SOX2.p2	NM_001145856|SH3BP2|6452|SH3-domain binding protein 2	U56386|SH3BP2|6452|SH3-domain binding protein 2
hg19_v1_chr11_-_6633178_6633238	0.0113372	SOX2.p2	AL833496|TAF10|6881|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
hg19_v1_chr3_+_156008775_156008845	0.0112834	SOX2.p2	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v1_chrX_+_49217770_49217780	0.0112784	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	DQ894341|GAGE5|2577|G antigen 5	HQ258058|GAGE12E|729431|G antigen 12E	NM_001098405|GAGE12F|100008586|G antigen 12F	BC069086|GAGE7|2579|G antigen 7
hg19_v1_chr1_+_173684136_173684231	0.0112461	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg19_v1_chr10_-_27443309_27443348	0.0112417	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_001253866|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg19_v1_chr17_-_79478956_79479000	0.0112301	SOX2.p2	BC023548|ACTG1|71|actin, gamma 1	BC039144|ACTG1|71|actin, gamma 1
hg19_v1_chr15_-_80216004_80216072	0.011225	SOX2.p2	AF249277|ST20|400410|suppressor of tumorigenicity 20
hg19_v1_chr5_+_86564146_86564164	0.0111811	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr14_+_105780903_105781178	0.011149	SOX2.p2	AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2	BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2
hg19_v1_chr1_+_225997804_225997851	0.0111251	SOX2.p2	U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chrX_+_16668280_16668314	0.0110794	SOX2.p2	L13220|S100G|795|S100 calcium binding protein G	NM_004057|S100G|795|S100 calcium binding protein G	X65869|S100G|795|S100 calcium binding protein G	BC112174|S100G|795|S100 calcium binding protein G
hg19_v1_chr1_-_149899623_149899670	0.011058	SOX2.p2	DQ892971|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	DQ896220|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	EU176749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK223322|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC004273|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	BC013886|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	AK310495|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa
hg19_v1_chr8_+_12869772_12869772	0.0110089	SOX2.p2	AB040889|KIAA1456|57604|KIAA1456	NM_001099677|KIAA1456|57604|KIAA1456
hg19_v1_chr17_-_79479780_79479830	0.0108999	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1
hg19_v1_chr5_+_86563594_86563777	0.0108701	SOX2.p2	CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg19_v1_chr19_-_48673559_48673604	0.010837	SOX2.p2	M36067|LIG1|3978|ligase I, DNA, ATP-dependent	NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent	AK314210|LIG1|3978|ligase I, DNA, ATP-dependent	AK297296|LIG1|3978|ligase I, DNA, ATP-dependent	AK303644|LIG1|3978|ligase I, DNA, ATP-dependent	AB208791|LIG1|3978|ligase I, DNA, ATP-dependent	AK225863|LIG1|3978|ligase I, DNA, ATP-dependent	AK300370|LIG1|3978|ligase I, DNA, ATP-dependent
hg19_v1_chr1_+_205236591_205236677	0.010818	SOX2.p2	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2
hg19_v1_chr19_+_41770329_41770330	0.0108008	SOX2.p2	AK291315|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr12_-_90049818_90049884	0.0107553	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg19_v1_chr1_+_155179005_155179047	0.010749	SOX2.p2	BC035616|MTX1|4580|metaxin 1	AX775989|MTX1|4580|metaxin 1
hg19_v1_chr8_+_98656494_98656732	0.0107391	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg19_v1_chr19_+_9938587_9938639	0.0107279	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg19_v1_chr12_-_16758312_16758338	0.0107119	SOX2.p2	NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr15_+_44084039_44084399	0.0107046	SOX2.p2	BC008214|SERF2|10169|small EDRK-rich factor 2	NM_001018108|SERF2|10169|small EDRK-rich factor 2	NM_001199875|SERF2|10169|small EDRK-rich factor 2	NM_001199876|SERF2|10169|small EDRK-rich factor 2
hg19_v1_chr1_-_1677430_1677493	0.0106908	SOX2.p2	AL049665|SLC35E2|9906|solute carrier family 35, member E2	NM_001199787|SLC35E2|9906|solute carrier family 35, member E2	NM_182838|SLC35E2|9906|solute carrier family 35, member E2	BC110653|SLC35E2B|728661|solute carrier family 35, member E2B
hg19_v1_chr17_-_73511453_73511617	0.0105701	SOX2.p2	AF451976|CASKIN2|57513|CASK interacting protein 2	BC032359|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr13_+_52436116_52436273	0.0105687	SOX2.p2	AK098719|CCDC70|83446|coiled-coil domain containing 70	NM_031290|CCDC70|83446|coiled-coil domain containing 70	AK225745|CCDC70|83446|coiled-coil domain containing 70	AL136887|CCDC70|83446|coiled-coil domain containing 70	BC069691|CCDC70|83446|coiled-coil domain containing 70	BC069748|CCDC70|83446|coiled-coil domain containing 70	BC069770|CCDC70|83446|coiled-coil domain containing 70	BC069806|CCDC70|83446|coiled-coil domain containing 70
hg19_v1_chr5_+_140787769_140787769	0.0105617	SOX2.p2	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6	AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6	NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6
hg19_v1_chr11_+_68367824_68367929	0.010518	SOX2.p2	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3
hg19_v1_chr12_-_16757944_16758080	0.0104935	SOX2.p2	AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg19_v1_chr19_+_51728369_51728373	0.01044	SOX2.p2	BC028152|CD33|945|CD33 molecule	AK304810|CD33|945|CD33 molecule	DQ891726|CD33|945|CD33 molecule	DQ894903|CD33|945|CD33 molecule
hg19_v1_chr3_-_39322763_39322763	0.0104074	SOX2.p2	NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg19_v1_chr8_-_42623928_42623928	0.0103956	SOX2.p2	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6	NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6
hg19_v1_chr6_+_168418552_168418580	0.0103944	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg19_v1_chr17_+_39411635_39411635	0.0103823	SOX2.p2	NM_030975|KRTAP9-9|81870|keratin associated protein 9-9
hg19_v1_chr11_-_128712340_128712416	0.0103761	SOX2.p2	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1	AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v1_chr12_-_30848744_30848797	0.0103694	SOX2.p2	U77494|IPO8|10526|importin 8
hg19_v1_chr12_+_133657478_133657596	0.0103254	SOX2.p2	BC040561|ZNF140|7699|zinc finger protein 140	AK296572|ZNF140|7699|zinc finger protein 140	AK313145|ZNF140|7699|zinc finger protein 140	BC022291|ZNF140|7699|zinc finger protein 140
hg19_v1_chr9_+_132597728_132597802	0.0102927	SOX2.p2	BC039593|USP20|10868|ubiquitin specific peptidase 20	AY074877|USP20|10868|ubiquitin specific peptidase 20	NM_001008563|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr7_-_99699426_99699566	0.010275	SOX2.p2	NM_005916|MCM7|4176|minichromosome maintenance complex component 7
hg19_v1_chr4_-_144826659_144826715	0.0101888	SOX2.p2	EU176664|GYPE|2996|glycophorin E (MNS blood group)	BC064396|GYPE|2996|glycophorin E (MNS blood group)	BC017864|GYPE|2996|glycophorin E (MNS blood group)	M29610|GYPE|2996|glycophorin E (MNS blood group)	NM_002102|GYPE|2996|glycophorin E (MNS blood group)	NM_198682|GYPE|2996|glycophorin E (MNS blood group)
hg19_v1_chr11_+_69455884_69455937	0.0101767	SOX2.p2	AK299044|CCND1|595|cyclin D1	AK313136|CCND1|595|cyclin D1	X59798|CCND1|595|cyclin D1	BC025302|CCND1|595|cyclin D1	M74092|CCND1|595|cyclin D1	M64349|CCND1|595|cyclin D1
hg19_v1_chr11_-_82782870_82782877	0.0101664	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr1_+_87170515_87170594	0.0101307	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg19_v1_chr1_+_155293727_155293727	0.0100856	SOX2.p2	BC052277|RUSC1|23623|RUN and SH3 domain containing 1	NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1
hg19_v1_chr2_-_169746921_169746962	0.010042	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg19_v1_chr20_-_34542205_34542266	0.0100358	SOX2.p2	AM392883|SCAND1|51282|SCAN domain containing 1	AM393129|SCAND1|51282|SCAN domain containing 1	CR457188|SCAND1|51282|SCAN domain containing 1	EU446495|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr15_-_65282227_65282265	0.0100232	SOX2.p2	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr3_-_128294928_128294928	0.00996548	SOX2.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg19_v1_chr19_-_42806928_42806954	0.00996461	SOX2.p2	NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v1_chr1_+_228285594_228285686	0.00994355	SOX2.p2	BC010415|ARF1|375|ADP-ribosylation factor 1
hg19_v1_chr17_+_66031814_66031866	0.0099393	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr5_+_82767492_82767743	0.00992728	SOX2.p2	NM_001126336|VCAN|1462|versican	NM_001164097|VCAN|1462|versican	NM_001164098|VCAN|1462|versican	NM_004385|VCAN|1462|versican	U16306|VCAN|1462|versican	U26555|VCAN|1462|versican	X15998|VCAN|1462|versican	AK307642|VCAN|1462|versican	AB209491|VCAN|1462|versican	BC050524|VCAN|1462|versican	D32039|VCAN|1462|versican
hg19_v1_chr22_-_18257221_18257225	0.00989302	SOX2.p2	BC009197|BID|637|BH3 interacting domain death agonist	AF087891|BID|637|BH3 interacting domain death agonist	AF042083|BID|637|BH3 interacting domain death agonist
hg19_v1_chr14_+_52456322_52456357	0.00988825	SOX2.p2	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr16_-_71917411_71917443	0.00983857	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821	NM_001201553|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821
hg19_v1_chr12_+_58176527_58176592	0.00982716	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial
hg19_v1_chr6_-_49681245_49681298	0.00965719	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg19_v1_chrX_-_154842492_154842621	0.00961191	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg19_v1_chr5_+_43121592_43121637	0.00959785	SOX2.p2	AK299315|ZNF131|7690|zinc finger protein 131	AK307977|ZNF131|7690|zinc finger protein 131
hg19_v1_chr19_+_41770285_41770328	0.00958542	SOX2.p2	BC009988|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr8_+_120885899_120886110	0.00957212	SOX2.p2	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein	BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein	AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein
hg19_v1_chr4_-_109087876_109087952	0.0095694	SOX2.p2	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1	NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1
hg19_v1_chr8_-_72274466_72274485	0.00956413	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg19_v1_chr1_+_174417211_174417249	0.0095481	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52	HQ995526|GPR52|9293|G protein-coupled receptor 52
hg19_v1_chr11_-_3013577_3013622	0.00953546	SOX2.p2	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4	U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr7_+_74072055_74072190	0.00952912	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg19_v1_chr2_-_45838383_45838432	0.00951289	SOX2.p2	AK056536|SRBD1|55133|S1 RNA binding domain 1	NM_018079|SRBD1|55133|S1 RNA binding domain 1
hg19_v1_chr6_-_136610894_136610927	0.00940481	SOX2.p2	BC078160|BCLAF1|9774|BCL2-associated transcription factor 1	BC063846|BCLAF1|9774|BCL2-associated transcription factor 1	BX649160|BCLAF1|9774|BCL2-associated transcription factor 1	BC016682|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr8_-_67090690_67090845	0.00938907	SOX2.p2	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg19_v1_chr1_-_68915631_68915641	0.00928853	SOX2.p2	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa
hg19_v1_chr17_-_73511626_73511653	0.00928187	SOX2.p2	BC066643|CASKIN2|57513|CASK interacting protein 2	NM_020753|CASKIN2|57513|CASK interacting protein 2
hg19_v1_chr7_+_100209724_100209815	0.00927713	SOX2.p2	NM_001040097|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr4_+_30722191_30722198	0.00920938	SOX2.p2	AB006757|PCDH7|5099|protocadherin 7
hg19_v1_chr17_-_4269610_4269812	0.00920535	SOX2.p2	BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1
hg19_v1_chr4_+_142142073_142142100	0.00916786	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg19_v1_chr10_-_123734708_123734812	0.00903202	SOX2.p2	AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)
hg19_v1_chr2_-_161350304_161350330	0.00896549	SOX2.p2	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg19_v1_chr6_-_135375954_135376035	0.00892749	SOX2.p2	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)	AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)	AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)	U87791|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)	NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)
hg19_v1_chr11_+_94800397_94800420	0.00892529	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg19_v1_chr19_+_41770273_41770281	0.00892141	SOX2.p2	AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chrY_-_19992072_19992099	0.00891331	SOX2.p2	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr9_-_132597500_132597538	0.00890337	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg19_v1_chr2_-_10952855_10952986	0.00889377	SOX2.p2	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6	D49489|PDIA6|10130|protein disulfide isomerase family A, member 6	BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6	NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6
hg19_v1_chr9_+_132597651_132597717	0.00886531	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg19_v1_chr15_-_31283617_31283918	0.00876943	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg19_v1_chr19_-_44439410_44439459	0.00872439	SOX2.p2	AK127739|ZNF45|7596|zinc finger protein 45	NM_003425|ZNF45|7596|zinc finger protein 45
hg19_v1_chr7_+_74072007_74072036	0.00872074	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg19_v1_chr1_-_52344377_52344400	0.00868598	SOX2.p2	U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)	BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr3_+_172472246_172472359	0.00864934	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg19_v1_chr19_-_46272102_46272128	0.00862421	SOX2.p2	
hg19_v1_chrX_-_16888462_16888533	0.00860891	SOX2.p2	NM_002893|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr12_-_114846191_114846246	0.0086025	SOX2.p2	AB051068|TBX5|6910|T-box 5	AF221714|TBX5|6910|T-box 5	NM_000192|TBX5|6910|T-box 5	NM_080717|TBX5|6910|T-box 5	Y09445|TBX5|6910|T-box 5
hg19_v1_chr2_-_65357191_65357248	0.00859846	SOX2.p2	BC000905|RAB1A|5861|RAB1A, member RAS oncogene family	BX571747|RAB1A|5861|RAB1A, member RAS oncogene family	AL050268|RAB1A|5861|RAB1A, member RAS oncogene family	AK303678|RAB1A|5861|RAB1A, member RAS oncogene family	AK055927|RAB1A|5861|RAB1A, member RAS oncogene family	AK315495|RAB1A|5861|RAB1A, member RAS oncogene family
hg19_v1_chr22_-_18257160_18257189	0.00858293	SOX2.p2	D89803|BID|637|BH3 interacting domain death agonist	AY005151|BID|637|BH3 interacting domain death agonist	EU678292|BID|637|BH3 interacting domain death agonist
hg19_v1_chr1_+_180897572_180897590	0.00854666	SOX2.p2	
hg19_v1_chr5_-_22853730_22853730	0.00853093	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg19_v1_chr8_+_19796730_19796808	0.00848217	SOX2.p2	AK092286|LPL|4023|lipoprotein lipase	AK290290|LPL|4023|lipoprotein lipase	AK222464|LPL|4023|lipoprotein lipase	AK312311|LPL|4023|lipoprotein lipase	M15856|LPL|4023|lipoprotein lipase	X54516|LPL|4023|lipoprotein lipase
hg19_v1_chr8_-_133687761_133687894	0.0084382	SOX2.p2	BC027589|LRRC6|23639|leucine rich repeat containing 6	BC047286|LRRC6|23639|leucine rich repeat containing 6	NM_012472|LRRC6|23639|leucine rich repeat containing 6	AK313107|LRRC6|23639|leucine rich repeat containing 6
hg19_v1_chr15_-_73051650_73051778	0.00840567	SOX2.p2	
hg19_v1_chr11_-_66313474_66313501	0.00839296	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg19_v1_chr19_+_41770336_41770347	0.0083909	SOX2.p2	BC002564|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr1_-_167883243_167883452	0.00834131	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg19_v1_chrX_+_41193409_41193505	0.00833976	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg19_v1_chr1_-_52344406_52344424	0.00823326	SOX2.p2	AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)	X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr7_+_72742154_72742430	0.00819623	SOX2.p2	NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa	AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa	NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa	AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa	BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa	AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa	EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa	GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa
hg19_v1_chr14_-_61115906_61116274	0.00816744	SOX2.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg19_v1_chr3_+_9773439_9773461	0.0081527	SOX2.p2	BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1
hg19_v1_chr19_-_43098980_43099081	0.00815197	SOX2.p2	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8
hg19_v1_chr3_+_45730914_45730957	0.00812818	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v1_chr3_-_183735617_183735765	0.00807003	SOX2.p2	BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v1_chr1_-_52343690_52343711	0.00805312	SOX2.p2	AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)	AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr1_-_205719340_205719371	0.00804517	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chrX_-_2847315_2847348	0.00801968	SOX2.p2	AF160499|ARSD|414|arylsulfatase D	BC080179|ARSD|414|arylsulfatase D	BC020229|ARSD|414|arylsulfatase D
hg19_v1_chr14_+_24641084_24641101	0.00801323	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg19_v1_chr16_+_68344868_68345050	0.00789035	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg19_v1_chr5_+_108084638_108084706	0.00778939	SOX2.p2	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase	BC058030|FER|2241|fer (fps/fes related) tyrosine kinase
hg19_v1_chr2_+_85132999_85133125	0.00778034	SOX2.p2	M92381|TMSB10|9168|thymosin beta 10
hg19_v1_chr1_+_36273786_36273855	0.00775736	SOX2.p2	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4	NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4
hg19_v1_chr11_-_82997376_82997434	0.00771478	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg19_v1_chr22_-_18257194_18257220	0.00771446	SOX2.p2	AK313729|BID|637|BH3 interacting domain death agonist	BC033634|BID|637|BH3 interacting domain death agonist
hg19_v1_chr9_-_35072643_35072738	0.0077075	SOX2.p2	NM_007126|VCP|7415|valosin containing protein
hg19_v1_chr15_+_23810808_23810928	0.00768108	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg19_v1_chr20_+_9458460_9458567	0.00760592	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg19_v1_chr11_-_3013479_3013521	0.00759024	SOX2.p2	BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4	AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4
hg19_v1_chr7_+_129906702_129906727	0.00753544	SOX2.p2	BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)	NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)	BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)	AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)	U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)	DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)	BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)
hg19_v1_chr1_-_206785694_206785817	0.00751216	SOX2.p2	DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D	DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D	BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D	BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D	AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D	BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D	AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D	AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D	AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D	AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D
hg19_v1_chr1_-_52344433_52344608	0.0074967	SOX2.p2	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)	NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chr6_+_34204647_34204654	0.00748412	SOX2.p2	AK096863|HMGA1|3159|high mobility group AT-hook 1	M23616|HMGA1|3159|high mobility group AT-hook 1	M23617|HMGA1|3159|high mobility group AT-hook 1	NM_145901|HMGA1|3159|high mobility group AT-hook 1	NM_145902|HMGA1|3159|high mobility group AT-hook 1	AK301434|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr16_+_67927170_67927275	0.00748364	SOX2.p2	AK309272|PSKH1|5681|protein serine kinase H1	NM_006742|PSKH1|5681|protein serine kinase H1	BC062616|PSKH1|5681|protein serine kinase H1	AJ272212|PSKH1|5681|protein serine kinase H1
hg19_v1_chr14_+_64971504_64971542	0.00744991	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg19_v1_chr1_+_111992105_111992127	0.00744395	SOX2.p2	BC005960|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AY871272|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK313541|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	AK223018|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v1_chr1_-_200378832_200378986	0.00742457	SOX2.p2	AF125158|ZNF281|23528|zinc finger protein 281	BC051905|ZNF281|23528|zinc finger protein 281
hg19_v1_chr3_+_184038445_184038482	0.00739863	SOX2.p2	BC082764|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg19_v1_chr9_+_35538890_35538938	0.0073971	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg19_v1_chr12_-_102455739_102455761	0.00737425	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53
hg19_v1_chr11_+_18433845_18433930	0.00732428	SOX2.p2	NM_002301|LDHC|3948|lactate dehydrogenase C	NM_017448|LDHC|3948|lactate dehydrogenase C	AY286300|LDHC|3948|lactate dehydrogenase C	U13680|LDHC|3948|lactate dehydrogenase C	BC064388|LDHC|3948|lactate dehydrogenase C	J02938|LDHC|3948|lactate dehydrogenase C	BC019249|LDHC|3948|lactate dehydrogenase C	BC090043|LDHC|3948|lactate dehydrogenase C	AF401094|LDHC|3948|lactate dehydrogenase C	AF401095|LDHC|3948|lactate dehydrogenase C	AF401096|LDHC|3948|lactate dehydrogenase C	AF401097|LDHC|3948|lactate dehydrogenase C	AK058181|LDHC|3948|lactate dehydrogenase C
hg19_v1_chr4_-_141677470_141677529	0.00728669	SOX2.p2	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)
hg19_v1_chr11_+_73498913_73498939	0.0072654	SOX2.p2	AF161408|MRPL48|51642|mitochondrial ribosomal protein L48	AK297746|MRPL48|51642|mitochondrial ribosomal protein L48	NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48	BC009764|MRPL48|51642|mitochondrial ribosomal protein L48	AK309219|MRPL48|51642|mitochondrial ribosomal protein L48	AK310005|MRPL48|51642|mitochondrial ribosomal protein L48
hg19_v1_chr11_+_112832201_112832212	0.00726396	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg19_v1_chr22_-_18257238_18257430	0.00723158	SOX2.p2	BC022072|BID|637|BH3 interacting domain death agonist	NM_001196|BID|637|BH3 interacting domain death agonist	NM_001244569|BID|637|BH3 interacting domain death agonist	NM_001244570|BID|637|BH3 interacting domain death agonist	NM_197967|BID|637|BH3 interacting domain death agonist	EU678293|BID|637|BH3 interacting domain death agonist	EU678294|BID|637|BH3 interacting domain death agonist	NM_001244567|BID|637|BH3 interacting domain death agonist
hg19_v1_chrX_+_56589961_56590141	0.00717773	SOX2.p2	NM_013444|UBQLN2|29978|ubiquilin 2	BC069237|UBQLN2|29978|ubiquilin 2	AK297252|UBQLN2|29978|ubiquilin 2	AK302885|UBQLN2|29978|ubiquilin 2	AF189009|UBQLN2|29978|ubiquilin 2
hg19_v1_chr19_-_1652327_1652352	0.00713097	SOX2.p2	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
hg19_v1_chr17_-_16097882_16097955	0.007061	SOX2.p2	AB028970|NCOR1|9611|nuclear receptor corepressor 1	BC167431|NCOR1|9611|nuclear receptor corepressor 1	NM_001190438|NCOR1|9611|nuclear receptor corepressor 1	NM_001190440|NCOR1|9611|nuclear receptor corepressor 1	AF087856|NCOR1|9611|nuclear receptor corepressor 1	AF303586|NCOR1|9611|nuclear receptor corepressor 1
hg19_v1_chr2_+_11682836_11682850	0.00706085	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg19_v1_chr12_+_22778085_22778210	0.00701292	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg19_v1_chr1_-_151688791_151688881	0.00700312	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg19_v1_chr2_-_3605918_3605924	0.00698827	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg19_v1_chr7_-_142583260_142583506	0.00698266	SOX2.p2	AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6
hg19_v1_chr3_-_57583090_57583148	0.00696602	SOX2.p2	BC022866|ARF4|378|ADP-ribosylation factor 4	BC016325|ARF4|378|ADP-ribosylation factor 4
hg19_v1_chr1_+_225997742_225997802	0.00695404	SOX2.p2	AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)
hg19_v1_chr3_-_10067989_10068077	0.00694249	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg19_v1_chr1_-_52344010_52344058	0.0069391	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg19_v1_chrX_-_11683820_11683820	0.00693093	SOX2.p2	AF012272|ARHGAP6|395|Rho GTPase activating protein 6	AF022212|ARHGAP6|395|Rho GTPase activating protein 6	AF117067|ARHGAP6|395|Rho GTPase activating protein 6	NM_006125|ARHGAP6|395|Rho GTPase activating protein 6	NM_013427|ARHGAP6|395|Rho GTPase activating protein 6
hg19_v1_chr11_+_69455938_69455962	0.00692797	SOX2.p2	BC000076|CCND1|595|cyclin D1	BC001501|CCND1|595|cyclin D1	BC014078|CCND1|595|cyclin D1	M73554|CCND1|595|cyclin D1	BC023620|CCND1|595|cyclin D1
hg19_v1_chr2_-_211168315_211168338	0.00691181	SOX2.p2	X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg19_v1_chr16_-_70557430_70557459	0.00689402	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg19_v1_chr7_-_122839999_122840024	0.00687874	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg19_v1_chr8_-_21645670_21645915	0.00686492	SOX2.p2	AY326396|GFRA2|2675|GDNF family receptor alpha 2	AY941828|GFRA2|2675|GDNF family receptor alpha 2	U93703|GFRA2|2675|GDNF family receptor alpha 2	AF002700|GFRA2|2675|GDNF family receptor alpha 2	AK299623|GFRA2|2675|GDNF family receptor alpha 2	U97145|GFRA2|2675|GDNF family receptor alpha 2
hg19_v1_chr2_-_25391558_25391558	0.00681696	SOX2.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg19_v1_chr3_-_187009469_187009809	0.0068131	SOX2.p2	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v1_chr12_+_70636773_70636809	0.00681238	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	NM_001199302|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg19_v1_chr9_-_139334267_139334273	0.00680703	SOX2.p2	AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chr14_+_103800492_103800528	0.00680566	SOX2.p2	NM_001969|EIF5|1983|eukaryotic translation initiation factor 5
hg19_v1_chr5_-_176739291_176739291	0.00679699	SOX2.p2	NM_001142935|MXD3|83463|MAX dimerization protein 3	NM_031300|MXD3|83463|MAX dimerization protein 3
hg19_v1_chr11_-_59383179_59383242	0.00674838	SOX2.p2	BC011581|OSBP|5007|oxysterol binding protein
hg19_v1_chr1_+_231664398_231664465	0.00672564	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg19_v1_chr14_-_21994342_21994483	0.00670865	SOX2.p2	AK294051|SALL2|6297|sal-like 2 (Drosophila)	BC024245|SALL2|6297|sal-like 2 (Drosophila)	AK296414|SALL2|6297|sal-like 2 (Drosophila)	BC090958|SALL2|6297|sal-like 2 (Drosophila)	AK289358|SALL2|6297|sal-like 2 (Drosophila)
hg19_v1_chr3_+_23986735_23986895	0.00663426	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg19_v1_chr4_+_154074269_154074269	0.00662871	SOX2.p2	BC011052|TRIM2|23321|tripartite motif containing 2	NM_001130067|TRIM2|23321|tripartite motif containing 2
hg19_v1_chrX_+_22050920_22051130	0.0066186	SOX2.p2	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked	U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked
hg19_v1_chr16_+_68279206_68279295	0.0065975	SOX2.p2	AK300596|PLA2G15|23659|phospholipase A2, group XV	AK074828|PLA2G15|23659|phospholipase A2, group XV	NM_012320|PLA2G15|23659|phospholipase A2, group XV	AK296263|PLA2G15|23659|phospholipase A2, group XV	AK298494|PLA2G15|23659|phospholipase A2, group XV	AL110209|PLA2G15|23659|phospholipase A2, group XV	BC062605|PLA2G15|23659|phospholipase A2, group XV	AK001705|PLA2G15|23659|phospholipase A2, group XV	AK222790|PLA2G15|23659|phospholipase A2, group XV
hg19_v1_chr11_+_125034604_125034649	0.00659572	SOX2.p2	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2	AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2
hg19_v1_chr4_-_54930771_54930824	0.00653141	SOX2.p2	AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2	NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2
hg19_v1_chr1_+_10490429_10490557	0.00652964	SOX2.p2	AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough	BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1
hg19_v1_chr6_+_31783314_31783357	0.00652111	SOX2.p2	AK096017|HSPA1A|3303|heat shock 70kDa protein 1A	AK225692|HSPA1A|3303|heat shock 70kDa protein 1A	AK225699|HSPA1A|3303|heat shock 70kDa protein 1A	AK291295|HSPA1A|3303|heat shock 70kDa protein 1A	AK294182|HSPA1A|3303|heat shock 70kDa protein 1A	AK295398|HSPA1B|3304|heat shock 70kDa protein 1B	AK298056|HSPA1A|3303|heat shock 70kDa protein 1A	AK301574|HSPA1A|3303|heat shock 70kDa protein 1A	AK303980|HSPA1A|3303|heat shock 70kDa protein 1A	AK304618|HSPA1A|3303|heat shock 70kDa protein 1A	AK304652|HSPA1A|3303|heat shock 70kDa protein 1A	AK301243|HSPA1A|3303|heat shock 70kDa protein 1A	AB209818|HSPA1A|3303|heat shock 70kDa protein 1A	BC002453|HSPA1A|3303|heat shock 70kDa protein 1A
hg19_v1_chrY_-_19882311_19882439	0.00647582	SOX2.p2	BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked	NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2	NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked
hg19_v1_chr6_+_131958441_131958524	0.00645276	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v1_chr12_+_22199219_22199239	0.00641228	SOX2.p2	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg19_v1_chrX_+_1733940_1734067	0.00641222	SOX2.p2	AK314922|ASMT|438|acetylserotonin O-methyltransferase	NM_001171038|ASMT|438|acetylserotonin O-methyltransferase	U11091|ASMT|438|acetylserotonin O-methyltransferase	M83779|ASMT|438|acetylserotonin O-methyltransferase	NM_001171039|ASMT|438|acetylserotonin O-methyltransferase	BC001620|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chrX_-_119603136_119603154	0.00639921	SOX2.p2	AK291090|LAMP2|3920|lysosomal-associated membrane protein 2	AK293931|LAMP2|3920|lysosomal-associated membrane protein 2
hg19_v1_chr2_-_190627923_190627952	0.00637805	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg19_v1_chr6_-_134498973_134499012	0.00637039	SOX2.p2	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1	AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chrX_-_2847351_2847426	0.00634494	SOX2.p2	AK314479|ARSD|414|arylsulfatase D	AK021472|ARSD|414|arylsulfatase D	X83572|ARSD|414|arylsulfatase D	NM_001669|ARSD|414|arylsulfatase D
hg19_v1_chrY_+_20137666_20137693	0.00630454	SOX2.p2	AF080598|CDY2A|9426|chromodomain protein, Y-linked, 2A	NM_004825|CDY2A|9426|chromodomain protein, Y-linked, 2A	BC069087|CDY2B|203611|chromodomain protein, Y-linked, 2B	NM_001001722|CDY2B|203611|chromodomain protein, Y-linked, 2B	AK292233|CDY2A|9426|chromodomain protein, Y-linked, 2A
hg19_v1_chr10_+_85899184_85899331	0.00629739	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein
hg19_v1_chr12_-_21757752_21757780	0.00628084	SOX2.p2	AK308373|GYS2|2998|glycogen synthase 2 (liver)	D29685|GYS2|2998|glycogen synthase 2 (liver)	NM_021957|GYS2|2998|glycogen synthase 2 (liver)
hg19_v1_chrY_+_14813159_14813159	0.00627553	SOX2.p2	AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked	NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked
hg19_v1_chr9_-_139760709_139760768	0.00627068	SOX2.p2	BT009863|EDF1|8721|endothelial differentiation-related factor 1	CR541914|EDF1|8721|endothelial differentiation-related factor 1	DQ891577|EDF1|8721|endothelial differentiation-related factor 1	DQ894770|EDF1|8721|endothelial differentiation-related factor 1	AB002282|EDF1|8721|endothelial differentiation-related factor 1	AB002283|EDF1|8721|endothelial differentiation-related factor 1	BC015500|EDF1|8721|endothelial differentiation-related factor 1	NM_003792|EDF1|8721|endothelial differentiation-related factor 1	NM_153200|EDF1|8721|endothelial differentiation-related factor 1
hg19_v1_chr9_+_140083053_140083199	0.00624414	SOX2.p2	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1	BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1
hg19_v1_chr7_+_91570150_91570412	0.00621836	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg19_v1_chr6_-_84140651_84140734	0.00616532	SOX2.p2	U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr10_-_81708860_81708860	0.00611773	SOX2.p2	BC022318|SFTPD|6441|surfactant protein D	NM_003019|SFTPD|6441|surfactant protein D
hg19_v1_chr19_+_1104068_1104117	0.00606612	SOX2.p2	BC010157|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)
hg19_v1_chr14_+_50234907_50234935	0.00605935	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg19_v1_chr11_-_82782883_82782912	0.00605458	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg19_v1_chr7_+_100209941_100210203	0.00605065	SOX2.p2	NM_001040098|MOSPD3|64598|motile sperm domain containing 3	NM_001040099|MOSPD3|64598|motile sperm domain containing 3	NM_023948|MOSPD3|64598|motile sperm domain containing 3	BC011653|MOSPD3|64598|motile sperm domain containing 3	BC009482|MOSPD3|64598|motile sperm domain containing 3	BC028475|MOSPD3|64598|motile sperm domain containing 3	BC005042|MOSPD3|64598|motile sperm domain containing 3
hg19_v1_chr3_-_150264280_150264427	0.00602545	SOX2.p2	AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1	AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1	NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1
hg19_v1_chr13_-_45150391_45150470	0.00601786	SOX2.p2	AK091854|TSC22D1|8848|TSC22 domain family, member 1	BC136475|TSC22D1|8848|TSC22 domain family, member 1	BC136482|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chrX_-_16888442_16888460	0.00601281	SOX2.p2	X72841|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr2_-_3605926_3605958	0.00601038	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1
hg19_v1_chr2_+_148602569_148602721	0.00600742	SOX2.p2	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	D31770|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg19_v1_chrX_-_140786561_140786654	0.00600345	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg19_v1_chr14_+_52456192_52456317	0.00599809	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166
hg19_v1_chr17_+_30814708_30814813	0.00592139	SOX2.p2	
hg19_v1_chr22_+_19419341_19419424	0.00590103	SOX2.p2	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40
hg19_v1_chr12_+_98909331_98909404	0.0058946	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg19_v1_chr3_+_109128836_109128836	0.0058398	SOX2.p2	AK058092|FLJ25363|401082|uncharacterized LOC401082	NM_001145553|FLJ25363|401082|uncharacterized LOC401082
hg19_v1_chr6_-_90062610_90062965	0.00583256	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U
hg19_v1_chr11_+_64889802_64889814	0.00581456	SOX2.p2	U39400|MRPL49|740|mitochondrial ribosomal protein L49	BC004378|MRPL49|740|mitochondrial ribosomal protein L49	AB062395|MRPL49|740|mitochondrial ribosomal protein L49
hg19_v1_chr9_+_138413283_138413329	0.00579691	SOX2.p2	M90424|LCN1|3933|lipocalin 1	NM_001252617|LCN1|3933|lipocalin 1	NM_001252618|LCN1|3933|lipocalin 1	NM_001252619|LCN1|3933|lipocalin 1	NM_002297|LCN1|3933|lipocalin 1	BC065721|LCN1|3933|lipocalin 1	X67647|LCN1|3933|lipocalin 1	BC074925|LCN1|3933|lipocalin 1	BC074926|LCN1|3933|lipocalin 1	X62418|LCN1|3933|lipocalin 1
hg19_v1_chr11_-_18610182_18610321	0.00579021	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg19_v1_chr15_+_85427891_85427931	0.00578893	SOX2.p2	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
hg19_v1_chr7_+_129008044_129008133	0.00578468	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg19_v1_chr17_-_9479124_9479138	0.00577289	SOX2.p2	BT007319|STX8|9482|syntaxin 8	DQ890985|STX8|9482|syntaxin 8	DQ894161|STX8|9482|syntaxin 8
hg19_v1_chr1_+_150266261_150266340	0.00576328	SOX2.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg19_v1_chr1_-_161102210_161102312	0.00573574	SOX2.p2	NM_001039712|DEDD|9191|death effector domain containing
hg19_v1_chr9_-_128003634_128003794	0.00573212	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr9_-_139334250_139334266	0.0057151	SOX2.p2	BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v1_chrX_+_30265270_30265322	0.00568013	SOX2.p2	NM_177404|MAGEB1|4112|melanoma antigen family B, 1	BC013772|MAGEB1|4112|melanoma antigen family B, 1
hg19_v1_chr2_+_102508333_102508351	0.00565088	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v1_chr22_+_41487787_41487794	0.00561163	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg19_v1_chr6_-_75953449_75953509	0.00559326	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg19_v1_chr2_-_128615706_128615745	0.00558983	SOX2.p2	BC093795|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	NM_004805|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC093797|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v1_chr5_+_170847059_170847203	0.00548344	SOX2.p2	BC006245|FGF18|8817|fibroblast growth factor 18	AB007422|FGF18|8817|fibroblast growth factor 18	AF211188|FGF18|8817|fibroblast growth factor 18	AM393798|FGF18|8817|fibroblast growth factor 18	BT019570|FGF18|8817|fibroblast growth factor 18	BT019571|FGF18|8817|fibroblast growth factor 18	DQ892736|FGF18|8817|fibroblast growth factor 18	DQ895983|FGF18|8817|fibroblast growth factor 18
hg19_v1_chr15_-_65281771_65281847	0.00546576	SOX2.p2	AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v1_chr9_-_35072545_35072569	0.00545037	SOX2.p2	BC121794|VCP|7415|valosin containing protein	BC122550|VCP|7415|valosin containing protein	BC110913|VCP|7415|valosin containing protein	AF100752|VCP|7415|valosin containing protein
hg19_v1_chr12_-_110906007_110906053	0.00543543	SOX2.p2	AM992619|GPN3|51184|GPN-loop GTPase 3	AM992620|GPN3|51184|GPN-loop GTPase 3	AY364262|GPN3|51184|GPN-loop GTPase 3	AM393009|GPN3|51184|GPN-loop GTPase 3	AM393821|GPN3|51184|GPN-loop GTPase 3	AF117229|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr9_-_128003615_128003632	0.00542705	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr22_+_29664216_29664339	0.00538314	SOX2.p2	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg19_v1_chr14_+_69658215_69658290	0.00537291	SOX2.p2	CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2	BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2	CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2	AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2	AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2
hg19_v1_chr19_+_30863318_30863443	0.00532156	SOX2.p2	BC150171|ZNF536|9745|zinc finger protein 536	AB002388|ZNF536|9745|zinc finger protein 536	BC146757|ZNF536|9745|zinc finger protein 536	NM_014717|ZNF536|9745|zinc finger protein 536	BC132720|ZNF536|9745|zinc finger protein 536	BC132722|ZNF536|9745|zinc finger protein 536
hg19_v1_chr17_+_45973515_45973646	0.00530624	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg19_v1_chr2_-_99347430_99347562	0.00529227	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr16_-_21663962_21663991	0.00527643	SOX2.p2	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6	NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6
hg19_v1_chr1_-_27226928_27226935	0.00526298	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr4_+_146031528_146031573	0.00525862	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg19_v1_chr14_-_20922841_20922962	0.00521606	SOX2.p2	AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase	CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase	DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase	EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase	AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase	AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr12_+_52347163_52347163	0.00521347	SOX2.p2	AK299496|ACVR1B|91|activin A receptor, type IB	NM_020327|ACVR1B|91|activin A receptor, type IB
hg19_v1_chr4_+_5053464_5053590	0.00520916	SOX2.p2	AJ250839|STK32B|55351|serine/threonine kinase 32B	NM_018401|STK32B|55351|serine/threonine kinase 32B	BC038238|STK32B|55351|serine/threonine kinase 32B	DQ890554|STK32B|55351|serine/threonine kinase 32B	DQ893714|STK32B|55351|serine/threonine kinase 32B
hg19_v1_chr6_-_75953511_75953643	0.00520884	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg19_v1_chr6_+_126070724_126070731	0.00517607	SOX2.p2	NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2
hg19_v1_chr6_-_53213699_53213743	0.00514503	SOX2.p2	AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5	AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5	BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5	BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr13_-_52733995_52733995	0.00511103	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr6_+_71136141_71136173	0.00510584	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg19_v1_chr16_+_50776012_50776104	0.00508354	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg19_v1_chr9_-_128003348_128003613	0.00506611	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v1_chr14_-_20923266_20923266	0.00506276	SOX2.p2	NM_017807|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr6_+_34204663_34204679	0.00501838	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg19_v1_chr10_+_104613966_104614036	0.00498842	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg19_v1_chr14_-_20922969_20923022	0.00496724	SOX2.p2	AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase	BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase
hg19_v1_chr20_+_2903852_2903911	0.00496384	SOX2.p2	NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg19_v1_chr12_-_102224509_102224663	0.00495748	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg19_v1_chr22_-_38840032_38840032	0.00494521	SOX2.p2	NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4
hg19_v1_chr4_+_71859391_71859552	0.00491417	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	JF806429|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg19_v1_chr4_+_142142044_142142066	0.00490562	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg19_v1_chr1_-_145610934_145610937	0.00489017	SOX2.p2	BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)
hg19_v1_chrY_+_1664347_1664347	0.00488483	SOX2.p2	NM_004043|ASMT|438|acetylserotonin O-methyltransferase	U11090|ASMT|438|acetylserotonin O-methyltransferase
hg19_v1_chr7_-_94953734_94953815	0.00486063	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg19_v1_chr5_+_149569519_149569650	0.00484995	SOX2.p2	AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
hg19_v1_chr22_-_20104695_20104728	0.00484892	SOX2.p2	BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr15_-_50647275_50647325	0.00483587	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg19_v1_chr1_+_74701070_74701135	0.00482968	SOX2.p2	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AF116826|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase	HQ258528|TNNI3K|51086|TNNI3 interacting kinase
hg19_v1_chr1_+_112938799_112938853	0.00475036	SOX2.p2	NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like	AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like
hg19_v1_chr17_+_40169024_40169079	0.0047188	SOX2.p2	BC063498|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2
hg19_v1_chr1_+_199996729_199997010	0.00468659	SOX2.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg19_v1_chr4_-_5890142_5890237	0.00466633	SOX2.p2	D78012|CRMP1|1400|collapsin response mediator protein 1	AK127754|CRMP1|1400|collapsin response mediator protein 1	BC000252|CRMP1|1400|collapsin response mediator protein 1	BC007613|CRMP1|1400|collapsin response mediator protein 1	AK309379|CRMP1|1400|collapsin response mediator protein 1
hg19_v1_chr12_-_110906056_110906088	0.00465416	SOX2.p2	AK223209|GPN3|51184|GPN-loop GTPase 3	AK314946|GPN3|51184|GPN-loop GTPase 3	BC008416|GPN3|51184|GPN-loop GTPase 3	BC031024|GPN3|51184|GPN-loop GTPase 3	AY359078|GPN3|51184|GPN-loop GTPase 3	BX537973|GPN3|51184|GPN-loop GTPase 3	NM_001164373|GPN3|51184|GPN-loop GTPase 3	NM_016301|GPN3|51184|GPN-loop GTPase 3
hg19_v1_chr12_+_7080077_7080078	0.00465077	SOX2.p2	AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr11_-_129817300_129817516	0.00464348	SOX2.p2	AB033057|PRDM10|56980|PR domain containing 10	BC117415|PRDM10|56980|PR domain containing 10	BC143612|PRDM10|56980|PR domain containing 10	BC143613|PRDM10|56980|PR domain containing 10	AF503171|PRDM10|56980|PR domain containing 10	AF275817|PRDM10|56980|PR domain containing 10	NM_199438|PRDM10|56980|PR domain containing 10	NM_199439|PRDM10|56980|PR domain containing 10
hg19_v1_chr3_+_127771287_127771305	0.00459645	SOX2.p2	AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v1_chr6_+_96025343_96025460	0.00449778	SOX2.p2	NM_024641|MANEA|79694|mannosidase, endo-alpha	BX640869|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg19_v1_chr19_-_11450254_11450347	0.00446061	SOX2.p2	AF081353|RAB3D|9545|RAB3D, member RAS oncogene family	BC016471|RAB3D|9545|RAB3D, member RAS oncogene family	AK313538|RAB3D|9545|RAB3D, member RAS oncogene family	NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family
hg19_v1_chr6_-_134639195_134639195	0.00444473	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg19_v1_chr4_-_83295136_83295171	0.00437311	SOX2.p2	AK300149|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK292707|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	AK303552|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_001003810|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_002138|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031369|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	NM_031370|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v1_chr7_-_135433366_135433593	0.00436985	SOX2.p2	BC137311|FAM180A|389558|family with sequence similarity 180, member A	BC137312|FAM180A|389558|family with sequence similarity 180, member A	AK297754|FAM180A|389558|family with sequence similarity 180, member A	AY358803|FAM180A|389558|family with sequence similarity 180, member A	AK290250|FAM180A|389558|family with sequence similarity 180, member A	AK310180|FAM180A|389558|family with sequence similarity 180, member A	NM_205855|FAM180A|389558|family with sequence similarity 180, member A
hg19_v1_chr12_-_54121203_54121306	0.00436027	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg19_v1_chr6_-_53213747_53213976	0.00431791	SOX2.p2	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5	AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5	AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5	NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5
hg19_v1_chr8_-_33370552_33370702	0.00427897	SOX2.p2	AK026916|TTI2|80185|TELO2 interacting protein 2	BX648410|TTI2|80185|TELO2 interacting protein 2	BC007387|TTI2|80185|TELO2 interacting protein 2	BC066935|TTI2|80185|TELO2 interacting protein 2	NM_025115|TTI2|80185|TELO2 interacting protein 2	NM_001102401|TTI2|80185|TELO2 interacting protein 2
hg19_v1_chr12_-_48152860_48152888	0.00426563	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v1_chr3_+_49977476_49977577	0.00426546	SOX2.p2	AK291719|RBM6|10180|RNA binding motif protein 6	NM_001167582|RBM6|10180|RNA binding motif protein 6	NM_005777|RBM6|10180|RNA binding motif protein 6	AK298108|RBM6|10180|RNA binding motif protein 6	AF069517|RBM6|10180|RNA binding motif protein 6	AL832236|RBM6|10180|RNA binding motif protein 6	BX648535|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr19_-_58662144_58662153	0.00420526	SOX2.p2	BC047501|ZNF329|79673|zinc finger protein 329	NM_024620|ZNF329|79673|zinc finger protein 329	AK095349|ZNF329|79673|zinc finger protein 329	AK096542|ZNF329|79673|zinc finger protein 329
hg19_v1_chr9_+_90112419_90112753	0.00419962	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg19_v1_chr1_+_242012032_242012139	0.00419792	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg19_v1_chr11_+_71498497_71498717	0.00418499	SOX2.p2	NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1	NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1	NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1	AK130709|FAM86C1|55199|family with sequence similarity 86, member C1	AK311675|FAM86C1|55199|family with sequence similarity 86, member C1	AK311518|FAM86C1|55199|family with sequence similarity 86, member C1	BC032519|FAM86C1|55199|family with sequence similarity 86, member C1	AK001523|FAM86C1|55199|family with sequence similarity 86, member C1	AK293221|FAM86C1|55199|family with sequence similarity 86, member C1	AK311428|FAM86C1|55199|family with sequence similarity 86, member C1	AK315454|FAM86C1|55199|family with sequence similarity 86, member C1
hg19_v1_chr17_+_79651072_79651096	0.00417746	SOX2.p2	AF260566|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ892551|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	DQ895762|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	BT009754|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr16_+_1203240_1203412	0.00417337	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg19_v1_chr16_+_50775960_50776009	0.00414763	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg19_v1_chr21_+_40817793_40817797	0.00407133	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg19_v1_chr1_+_203764802_203764807	0.00405991	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr12_+_50869531_50869643	0.0039878	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg19_v1_chr1_+_145507556_145507666	0.00398506	SOX2.p2	NM_005105|RBM8A|9939|RNA binding motif protein 8A	BC071577|RBM8A|9939|RNA binding motif protein 8A	BC017088|RBM8A|9939|RNA binding motif protein 8A	AF198620|RBM8A|9939|RNA binding motif protein 8A	AF182415|RBM8A|9939|RNA binding motif protein 8A	BC017770|RBM8A|9939|RNA binding motif protein 8A	AK075009|RBM8A|9939|RNA binding motif protein 8A	AF161463|RBM8A|9939|RNA binding motif protein 8A	AF231511|RBM8A|9939|RNA binding motif protein 8A	AF127761|RBM8A|9939|RNA binding motif protein 8A	AF299118|RBM8A|9939|RNA binding motif protein 8A	CR541805|RBM8A|9939|RNA binding motif protein 8A	CR541823|RBM8A|9939|RNA binding motif protein 8A	GQ129283|RBM8A|9939|RNA binding motif protein 8A	GQ129284|RBM8A|9939|RNA binding motif protein 8A
hg19_v1_chr6_-_84140744_84140753	0.00397435	SOX2.p2	BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v1_chr8_+_1952875_1952941	0.0039703	SOX2.p2	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11
hg19_v1_chr2_+_241375235_241375295	0.00395954	SOX2.p2	AK223516|GPC1|2817|glypican 1	BC045712|GPC1|2817|glypican 1
hg19_v1_chr22_+_20105145_20105170	0.00393244	SOX2.p2	CU013156|RANBP1|5902|RAN binding protein 1	CU013444|RANBP1|5902|RAN binding protein 1
hg19_v1_chr14_+_67827030_67827036	0.00391406	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_+_49977582_49977625	0.00389451	SOX2.p2	AK308794|RBM6|10180|RNA binding motif protein 6	AK303371|RBM6|10180|RNA binding motif protein 6	AF091264|RBM6|10180|RNA binding motif protein 6	AK093836|RBM6|10180|RNA binding motif protein 6	AY216800|RBM6|10180|RNA binding motif protein 6	BC030057|RBM6|10180|RNA binding motif protein 6	BC046643|RBM6|10180|RNA binding motif protein 6	AF042857|RBM6|10180|RNA binding motif protein 6
hg19_v1_chr16_-_30546145_30546235	0.00386682	SOX2.p2	AB209546|ZNF747|65988|zinc finger protein 747	AK054567|ZNF747|65988|zinc finger protein 747	BC001361|ZNF747|65988|zinc finger protein 747	NM_023931|ZNF747|65988|zinc finger protein 747
hg19_v1_chr1_-_26232643_26232643	0.00386036	SOX2.p2	NM_203401|STMN1|3925|stathmin 1
hg19_v1_chr17_-_61819165_61819329	0.00383169	SOX2.p2	AF308302|STRADA|92335|STE20-related kinase adaptor alpha	AK074771|STRADA|92335|STE20-related kinase adaptor alpha	AK293160|STRADA|92335|STE20-related kinase adaptor alpha	AY290821|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha	NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha	NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha	NM_153335|STRADA|92335|STE20-related kinase adaptor alpha
hg19_v1_chr12_+_49761161_49761628	0.00381924	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg19_v1_chr6_-_42713837_42713914	0.00380411	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr10_+_127408083_127408144	0.00380137	SOX2.p2	BC026172|C10orf137|26098|chromosome 10 open reading frame 137	NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137	NM_015608|C10orf137|26098|chromosome 10 open reading frame 137	BC028715|C10orf137|26098|chromosome 10 open reading frame 137	BC105929|C10orf137|26098|chromosome 10 open reading frame 137	BC107479|C10orf137|26098|chromosome 10 open reading frame 137
hg19_v1_chr9_-_35072596_35072636	0.00379425	SOX2.p2	BC096751|VCP|7415|valosin containing protein	AK312310|VCP|7415|valosin containing protein	BC012195|VCP|7415|valosin containing protein	BC017171|VCP|7415|valosin containing protein
hg19_v1_chr12_+_122242580_122242643	0.00378158	SOX2.p2	NM_015048|SETD1B|23067|SET domain containing 1B	JF813787|SETD1B|23067|SET domain containing 1B
hg19_v1_chr17_-_4046190_4046240	0.00377495	SOX2.p2	
hg19_v1_chr3_-_93781659_93781830	0.00376902	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg19_v1_chr12_+_98909405_98909409	0.00376747	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg19_v1_chr22_-_38713217_38713366	0.00373858	SOX2.p2	BC006490|CSNK1E|1454|casein kinase 1, epsilon	AB091043|CSNK1E|1454|casein kinase 1, epsilon	AK223498|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr19_-_12912602_12912727	0.00373189	SOX2.p2	BC000452|PRDX2|7001|peroxiredoxin 2	BC003022|PRDX2|7001|peroxiredoxin 2	BC064138|PRDX2|7001|peroxiredoxin 2	Z22548|PRDX2|7001|peroxiredoxin 2	AK289485|PRDX2|7001|peroxiredoxin 2	AK293957|PRDX2|7001|peroxiredoxin 2	BC039428|PRDX2|7001|peroxiredoxin 2	AK022395|PRDX2|7001|peroxiredoxin 2	NM_005809|PRDX2|7001|peroxiredoxin 2	NM_181738|PRDX2|7001|peroxiredoxin 2
hg19_v1_chrY_-_2368579_2368579	0.00372061	SOX2.p2	BC015030|ZBED1|9189|zinc finger, BED-type containing 1	NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1
hg19_v1_chrX_+_108779009_108779020	0.00371791	SOX2.p2	AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2	BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr13_-_45150601_45150700	0.00371439	SOX2.p2	AB082525|TSC22D1|8848|TSC22 domain family, member 1	NM_001243799|TSC22D1|8848|TSC22 domain family, member 1	NM_183422|TSC22D1|8848|TSC22 domain family, member 1
hg19_v1_chr10_+_69644341_69644474	0.00371161	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg19_v1_chr13_-_76055872_76056805	0.00369986	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg19_v1_chr9_+_135753711_135753826	0.00367149	SOX2.p2	BC012940|C9orf9|11092|chromosome 9 open reading frame 9
hg19_v1_chrX_-_100306859_100306919	0.00365205	SOX2.p2	AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v1_chr7_+_43152196_43152257	0.00363561	SOX2.p2	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v1_chr11_-_47664014_47664212	0.00362225	SOX2.p2	DQ891810|MTCH2|23788|mitochondrial carrier 2	DQ894993|MTCH2|23788|mitochondrial carrier 2	AK223097|MTCH2|23788|mitochondrial carrier 2	BC000875|MTCH2|23788|mitochondrial carrier 2	AY380792|MTCH2|23788|mitochondrial carrier 2	AF085361|MTCH2|23788|mitochondrial carrier 2	AF176008|MTCH2|23788|mitochondrial carrier 2	AK295218|MTCH2|23788|mitochondrial carrier 2	AK313032|MTCH2|23788|mitochondrial carrier 2	NM_014342|MTCH2|23788|mitochondrial carrier 2
hg19_v1_chrX_+_77166178_77166208	0.00361423	SOX2.p2	NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide
hg19_v1_chrX_+_48242967_48242967	0.00353945	SOX2.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg19_v1_chr21_+_38791206_38791206	0.00353404	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg19_v1_chr1_-_38019828_38019954	0.00352898	SOX2.p2	AY081909|SNIP1|79753|Smad nuclear interacting protein 1	AK297176|SNIP1|79753|Smad nuclear interacting protein 1	AK300796|SNIP1|79753|Smad nuclear interacting protein 1	AK027622|SNIP1|79753|Smad nuclear interacting protein 1	AK022615|SNIP1|79753|Smad nuclear interacting protein 1	BC027040|SNIP1|79753|Smad nuclear interacting protein 1	NM_024700|SNIP1|79753|Smad nuclear interacting protein 1	AK293229|SNIP1|79753|Smad nuclear interacting protein 1	AK315574|SNIP1|79753|Smad nuclear interacting protein 1
hg19_v1_chr3_+_10857867_10857947	0.00348136	SOX2.p2	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
hg19_v1_chr10_-_22498911_22498911	0.00344073	SOX2.p2	NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1
hg19_v1_chr14_-_54908035_54908197	0.00343816	SOX2.p2	BX248284|CNIH|10175|cornichon homolog (Drosophila)	AY358635|CNIH|10175|cornichon homolog (Drosophila)	AK074781|CNIH|10175|cornichon homolog (Drosophila)	AK307074|CNIH|10175|cornichon homolog (Drosophila)	AK311897|CNIH|10175|cornichon homolog (Drosophila)	AF070654|CNIH|10175|cornichon homolog (Drosophila)	AF104398|CNIH|10175|cornichon homolog (Drosophila)	NM_005776|CNIH|10175|cornichon homolog (Drosophila)	BC103741|CNIH|10175|cornichon homolog (Drosophila)
hg19_v1_chrX_+_142967172_142967172	0.00343683	SOX2.p2	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like	NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like
hg19_v1_chr19_-_50266514_50266542	0.00340377	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg19_v1_chr12_+_66582914_66583002	0.00338272	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr14_+_20923705_20923804	0.00338244	SOX2.p2	BT007236|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	BT020133|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ891814|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	DQ894998|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg19_v1_chrX_-_16888175_16888436	0.00338062	SOX2.p2	CR541701|RBBP7|5931|retinoblastoma binding protein 7	AK291567|RBBP7|5931|retinoblastoma binding protein 7	BC114500|RBBP7|5931|retinoblastoma binding protein 7	BC114501|RBBP7|5931|retinoblastoma binding protein 7	U35143|RBBP7|5931|retinoblastoma binding protein 7
hg19_v1_chr12_+_7080081_7080186	0.003359	SOX2.p2	AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr1_-_200379165_200379223	0.00334805	SOX2.p2	BC060820|ZNF281|23528|zinc finger protein 281	NM_012482|ZNF281|23528|zinc finger protein 281	AK027284|ZNF281|23528|zinc finger protein 281
hg19_v1_chr17_-_40169400_40169446	0.00334026	SOX2.p2	AB209834|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ893064|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	DQ896317|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK291047|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC003601|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	U46571|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AM393511|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	BC011837|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK296602|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK316081|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr1_-_27226937_27226965	0.00331374	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg19_v1_chr15_+_33603162_33603176	0.00329689	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3	NM_001243996|RYR3|6263|ryanodine receptor 3
hg19_v1_chrX_+_47092264_47092361	0.00325554	SOX2.p2	BC140849|USP11|8237|ubiquitin specific peptidase 11	NM_004651|USP11|8237|ubiquitin specific peptidase 11
hg19_v1_chr12_+_98909410_98909413	0.0032497	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg19_v1_chr3_+_138067444_138067579	0.00321574	SOX2.p2	NM_001085049|MRAS|22808|muscle RAS oncogene homolog	NM_001252093|MRAS|22808|muscle RAS oncogene homolog	BC047690|MRAS|22808|muscle RAS oncogene homolog	AF043938|MRAS|22808|muscle RAS oncogene homolog
hg19_v1_chr14_+_73603140_73603159	0.00316097	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg19_v1_chr8_-_18871163_18871410	0.00312836	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr5_-_176326314_176326332	0.00312488	SOX2.p2	U51333|HK3|3101|hexokinase 3 (white cell)	BC028129|HK3|3101|hexokinase 3 (white cell)	NM_002115|HK3|3101|hexokinase 3 (white cell)
hg19_v1_chr9_-_98268866_98268881	0.00309118	SOX2.p2	AB209495|PTCH1|5727|patched 1	AB233423|PTCH1|5727|patched 1	AB233424|PTCH1|5727|patched 1
hg19_v1_chr22_+_20105076_20105093	0.00306053	SOX2.p2	AK293502|RANBP1|5902|RAN binding protein 1	BC071998|RANBP1|5902|RAN binding protein 1
hg19_v1_chr17_-_39041436_39041497	0.00306026	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg19_v1_chr6_-_42713822_42713835	0.00304669	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr6_-_108582225_108582252	0.00302523	SOX2.p2	BC015179|SNX3|8724|sorting nexin 3	BC014580|SNX3|8724|sorting nexin 3	AK289476|SNX3|8724|sorting nexin 3
hg19_v1_chr1_+_203764822_203764835	0.00301312	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr3_-_63849504_63849808	0.00299418	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr12_-_6716550_6716563	0.0028413	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg19_v1_chr4_+_123091757_123091757	0.00281844	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg19_v1_chr16_+_4902076_4902215	0.00276878	SOX2.p2	NM_016936|UBN1|29855|ubinuclein 1	AF108461|UBN1|29855|ubinuclein 1
hg19_v1_chr19_+_19626535_19626595	0.00276818	SOX2.p2	AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg19_v1_chr15_+_80352488_80352513	0.00275816	SOX2.p2	NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6
hg19_v1_chr10_+_124320180_124320272	0.0027245	SOX2.p2	AF159456|DMBT1|1755|deleted in malignant brain tumors 1	AJ000342|DMBT1|1755|deleted in malignant brain tumors 1	AJ243212|DMBT1|1755|deleted in malignant brain tumors 1	AJ243224|DMBT1|1755|deleted in malignant brain tumors 1	NM_004406|DMBT1|1755|deleted in malignant brain tumors 1	NM_007329|DMBT1|1755|deleted in malignant brain tumors 1	NM_017579|DMBT1|1755|deleted in malignant brain tumors 1	BC153299|DMBT1|1755|deleted in malignant brain tumors 1	AJ297935|DMBT1|1755|deleted in malignant brain tumors 1	AK304149|DMBT1|1755|deleted in malignant brain tumors 1	AK304128|DMBT1|1755|deleted in malignant brain tumors 1
hg19_v1_chr6_-_31628509_31628566	0.00265163	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg19_v1_chr7_-_37488408_37488529	0.00264533	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg19_v1_chr22_+_20105095_20105118	0.00262843	SOX2.p2	CR456556|RANBP1|5902|RAN binding protein 1
hg19_v1_chr21_-_27543445_27543445	0.00262416	SOX2.p2	AK296229|APP|351|amyloid beta (A4) precursor protein	NM_001136131|APP|351|amyloid beta (A4) precursor protein
hg19_v1_chr5_+_95997871_95997986	0.00262092	SOX2.p2	BC016066|CAST|831|calpastatin	NM_001042440|CAST|831|calpastatin
hg19_v1_chr6_+_26020677_26020717	0.00261749	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg19_v1_chr1_+_156182765_156182824	0.00261139	SOX2.p2	NM_001199653|PMF1|11243|polyamine-modulated factor 1	NM_001199654|PMF1|11243|polyamine-modulated factor 1	NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	NM_007221|PMF1|11243|polyamine-modulated factor 1	AK124646|PMF1|11243|polyamine-modulated factor 1	AK307287|PMF1|11243|polyamine-modulated factor 1	AK022523|PMF1|11243|polyamine-modulated factor 1	AK289490|PMF1|11243|polyamine-modulated factor 1	AK290260|PMF1|11243|polyamine-modulated factor 1	AK310694|PMF1|11243|polyamine-modulated factor 1	BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	BC065031|PMF1|11243|polyamine-modulated factor 1	DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough	EU832507|PMF1|11243|polyamine-modulated factor 1	EU832588|PMF1|11243|polyamine-modulated factor 1	AL080101|PMF1|11243|polyamine-modulated factor 1	BC056417|PMF1|11243|polyamine-modulated factor 1	AF141310|PMF1|11243|polyamine-modulated factor 1	BC050735|PMF1|11243|polyamine-modulated factor 1
hg19_v1_chr4_-_111563278_111563278	0.00260609	SOX2.p2	NM_001204397|PITX2|5308|paired-like homeodomain 2	NM_001204398|PITX2|5308|paired-like homeodomain 2	NM_001204399|PITX2|5308|paired-like homeodomain 2	NM_153426|PITX2|5308|paired-like homeodomain 2	NM_153427|PITX2|5308|paired-like homeodomain 2
hg19_v1_chr6_-_52926486_52926579	0.00259848	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg19_v1_chr11_-_66115016_66115166	0.00254584	SOX2.p2	DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v1_chr3_+_133502876_133502876	0.00250168	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg19_v1_chr14_-_67826414_67826719	0.00249842	SOX2.p2	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg19_v1_chr9_-_36401149_36401201	0.00249774	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg19_v1_chr8_+_133879202_133879245	0.00248221	SOX2.p2	AK303666|TG|7038|thyroglobulin	NM_003235|TG|7038|thyroglobulin	X05615|TG|7038|thyroglobulin	BC140933|TG|7038|thyroglobulin	U93033|TG|7038|thyroglobulin	X02154|TG|7038|thyroglobulin
hg19_v1_chr11_-_45939568_45939673	0.00247964	SOX2.p2	AF118240|PEX16|9409|peroxisomal biogenesis factor 16	NM_004813|PEX16|9409|peroxisomal biogenesis factor 16	NM_057174|PEX16|9409|peroxisomal biogenesis factor 16
hg19_v1_chr20_-_34542385_34542547	0.00243212	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg19_v1_chr8_-_124749573_124749665	0.00235328	SOX2.p2	CR541838|ANXA13|312|annexin A13	BC125158|ANXA13|312|annexin A13	AJ306450|ANXA13|312|annexin A13	Z11502|ANXA13|312|annexin A13	NM_001003954|ANXA13|312|annexin A13	NM_004306|ANXA13|312|annexin A13	AK290281|ANXA13|312|annexin A13	AK223374|ANXA13|312|annexin A13
hg19_v1_chr1_+_16090993_16091029	0.00233223	SOX2.p2	AF459643|FBLIM1|54751|filamin binding LIM protein 1	NM_001024215|FBLIM1|54751|filamin binding LIM protein 1	AK027444|FBLIM1|54751|filamin binding LIM protein 1
hg19_v1_chr10_+_91092238_91092329	0.00231765	SOX2.p2	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg19_v1_chr2_-_85788550_85788633	0.00226182	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg19_v1_chr2_+_228356287_228356295	0.00225562	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg19_v1_chr11_-_77531750_77531914	0.00225043	SOX2.p2	AF380176|RSF1|51773|remodeling and spacing factor 1	BC015360|RSF1|51773|remodeling and spacing factor 1	NM_016578|RSF1|51773|remodeling and spacing factor 1
hg19_v1_chrX_+_69488154_69488201	0.00224088	SOX2.p2	BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)	NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)	AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)
hg19_v1_chr8_+_29952921_29952965	0.00222043	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg19_v1_chr16_+_81069316_81069710	0.00221453	SOX2.p2	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg19_v1_chr2_+_162272619_162272744	0.00220765	SOX2.p2	NM_006593|TBR1|10716|T-box, brain, 1	BC104844|TBR1|10716|T-box, brain, 1	BC113418|TBR1|10716|T-box, brain, 1
hg19_v1_chr19_-_39303520_39303586	0.00220179	SOX2.p2	AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4	CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4	U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4	BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4	AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4
hg19_v1_chr7_-_23509631_23509728	0.00218576	SOX2.p2	
hg19_v1_chr19_+_58898634_58898670	0.00216069	SOX2.p2	AK223106|RPS5|6193|ribosomal protein S5	AK311938|RPS5|6193|ribosomal protein S5	D28455|RPS5|6193|ribosomal protein S5	NM_001009|RPS5|6193|ribosomal protein S5	BC015405|RPS5|6193|ribosomal protein S5	BC018828|RPS5|6193|ribosomal protein S5	BC018151|RPS5|6193|ribosomal protein S5	BC035830|RPS5|6193|ribosomal protein S5	U14970|RPS5|6193|ribosomal protein S5
hg19_v1_chr17_+_79651035_79651041	0.00211833	SOX2.p2	D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr19_+_51728319_51728367	0.00211166	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg19_v1_chr8_+_146277789_146277826	0.00209074	SOX2.p2	NM_023080|C8orf33|65265|chromosome 8 open reading frame 33	AK024642|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr19_+_9473695_9473695	0.00206547	SOX2.p2	NM_003451|ZNF177|7730|zinc finger protein 177	U37263|ZNF177|7730|zinc finger protein 177
hg19_v1_chr7_-_150020661_150020757	0.00205337	SOX2.p2	BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)	NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)
hg19_v1_chr17_-_17480325_17480354	0.00205171	SOX2.p2	CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase
hg19_v1_chr2_-_99347588_99347638	0.00204454	SOX2.p2	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v1_chr2_+_190648810_190648810	0.00203225	SOX2.p2	NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr10_+_123922940_123923011	0.00202483	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg19_v1_chr11_+_71709951_71710108	0.00201107	SOX2.p2	NM_001039659|IL18BP|10068|interleukin 18 binding protein	NM_001039660|IL18BP|10068|interleukin 18 binding protein	NM_173044|IL18BP|10068|interleukin 18 binding protein	AF215907|IL18BP|10068|interleukin 18 binding protein	BC044215|IL18BP|10068|interleukin 18 binding protein	AF110801|IL18BP|10068|interleukin 18 binding protein	NM_005699|IL18BP|10068|interleukin 18 binding protein	NM_173042|IL18BP|10068|interleukin 18 binding protein
hg19_v1_chr12_+_133656984_133657046	0.00197502	SOX2.p2	NM_003440|ZNF140|7699|zinc finger protein 140
hg19_v1_chr14_+_58894102_58894153	0.00195793	SOX2.p2	AK302836|KIAA0586|9786|KIAA0586	NM_001244189|KIAA0586|9786|KIAA0586	NM_001244190|KIAA0586|9786|KIAA0586	NM_001244191|KIAA0586|9786|KIAA0586	NM_001244192|KIAA0586|9786|KIAA0586	AB011158|KIAA0586|9786|KIAA0586	AK302635|KIAA0586|9786|KIAA0586	AY359881|KIAA0586|9786|KIAA0586
hg19_v1_chr1_-_151319674_151319702	0.00194944	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg19_v1_chr8_+_68864341_68864363	0.00191276	SOX2.p2	AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v1_chr19_-_6279797_6279809	0.001903	SOX2.p2	
hg19_v1_chr17_+_66031885_66031892	0.00189557	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg19_v1_chr17_+_7591666_7591804	0.00181811	SOX2.p2	AY766323|WRAP53|55135|WD repeat containing, antisense to TP53	DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53	NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53	NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53	AK001247|WRAP53|55135|WD repeat containing, antisense to TP53	AK225273|WRAP53|55135|WD repeat containing, antisense to TP53	AK225411|WRAP53|55135|WD repeat containing, antisense to TP53	AK303246|WRAP53|55135|WD repeat containing, antisense to TP53	BC002336|WRAP53|55135|WD repeat containing, antisense to TP53
hg19_v1_chr4_-_39979549_39979637	0.0017681	SOX2.p2	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v1_chr9_-_86595167_86595183	0.00176305	SOX2.p2	NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg19_v1_chr22_-_20104745_20104792	0.0017544	SOX2.p2	AK304068|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	AK057029|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_022727|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	NM_182984|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)
hg19_v1_chr10_+_35464514_35464549	0.00174546	SOX2.p2	NM_182769|CREM|1390|cAMP responsive element modulator	NM_182770|CREM|1390|cAMP responsive element modulator	AF417233|CREM|1390|cAMP responsive element modulator	AY292864|CREM|1390|cAMP responsive element modulator	BC090051|CREM|1390|cAMP responsive element modulator	AK301906|CREM|1390|cAMP responsive element modulator
hg19_v1_chr22_+_20104810_20105027	0.00173802	SOX2.p2	D38076|RANBP1|5902|RAN binding protein 1	NM_002882|RANBP1|5902|RAN binding protein 1	AK223506|RANBP1|5902|RAN binding protein 1
hg19_v1_chr4_+_113558611_113558725	0.00173081	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg19_v1_chr1_+_151138497_151138628	0.00172466	SOX2.p2	NM_001204856|SCNM1|79005|sodium channel modifier 1	NM_024041|SCNM1|79005|sodium channel modifier 1	AK301644|SCNM1|79005|sodium channel modifier 1	AK056322|SCNM1|79005|sodium channel modifier 1	BC000264|SCNM1|79005|sodium channel modifier 1	DQ892531|SCNM1|79005|sodium channel modifier 1	DQ895742|SCNM1|79005|sodium channel modifier 1
hg19_v1_chr15_+_22955754_22955754	0.00171554	SOX2.p2	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg19_v1_chrX_+_108780235_108780474	0.00167918	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2	NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2
hg19_v1_chr1_-_241799101_241799231	0.00167699	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg19_v1_chr20_-_2644777_2644892	0.00165607	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v1_chr17_+_79651042_79651048	0.00163446	SOX2.p2	AK303800|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v1_chr2_+_220492286_220492423	0.00162777	SOX2.p2	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3	BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3
hg19_v1_chr5_-_9630462_9630462	0.0016081	SOX2.p2	BC095521|TAS2R1|50834|taste receptor, type 2, member 1	NM_019599|TAS2R1|50834|taste receptor, type 2, member 1
hg19_v1_chr22_+_32149936_32149960	0.00160567	SOX2.p2	NM_001242897|DEPDC5|9681|DEP domain containing 5
hg19_v1_chr10_-_61666236_61666413	0.00160096	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg19_v1_chr17_+_35767311_35767311	0.00159601	SOX2.p2	AK022767|TADA2A|6871|transcriptional adaptor 2A	NM_001488|TADA2A|6871|transcriptional adaptor 2A	NM_133439|TADA2A|6871|transcriptional adaptor 2A
hg19_v1_chr17_-_56429495_56429577	0.0015951	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg19_v1_chr1_+_226250421_226250431	0.00158893	SOX2.p2	AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4
hg19_v1_chr7_-_155604815_155604966	0.0015803	SOX2.p2	L38518|SHH|6469|sonic hedgehog	NM_000193|SHH|6469|sonic hedgehog
hg19_v1_chr3_+_193310921_193310989	0.00157816	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg19_v1_chr15_-_60771118_60771430	0.00157251	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg19_v1_chr8_-_103137134_103137134	0.00155219	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg19_v1_chr19_-_44809126_44809203	0.00154731	SOX2.p2	AK315242|ZNF235|9310|zinc finger protein 235	BC105807|ZNF235|9310|zinc finger protein 235	BC143484|ZNF235|9310|zinc finger protein 235	BC117215|ZNF235|9310|zinc finger protein 235	BC143482|ZNF235|9310|zinc finger protein 235	AF027513|ZNF235|9310|zinc finger protein 235	AK307103|ZNF235|9310|zinc finger protein 235	AK300317|ZNF235|9310|zinc finger protein 235	NM_004234|ZNF235|9310|zinc finger protein 235
hg19_v1_chrX_+_150863729_150863729	0.00153695	SOX2.p2	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)
hg19_v1_chr12_+_66583004_66583016	0.00153645	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg19_v1_chr10_+_98740987_98741147	0.00152861	SOX2.p2	AK126886|C10orf12|26148|chromosome 10 open reading frame 12	BC024315|C10orf12|26148|chromosome 10 open reading frame 12	NM_015652|C10orf12|26148|chromosome 10 open reading frame 12
hg19_v1_chr6_+_42981840_42981954	0.00151257	SOX2.p2	NM_057161|KLHDC3|116138|kelch domain containing 3	AK308917|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr11_-_17498419_17498454	0.00149993	SOX2.p2	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr11_-_62369097_62369177	0.00149559	SOX2.p2	BC023656|MTA2|9219|metastasis associated 1 family, member 2	BC053650|MTA2|9219|metastasis associated 1 family, member 2
hg19_v1_chr6_-_71012750_71012850	0.00147946	SOX2.p2	X54412|COL9A1|1297|collagen, type IX, alpha 1	BC015409|COL9A1|1297|collagen, type IX, alpha 1	NM_001851|COL9A1|1297|collagen, type IX, alpha 1
hg19_v1_chr4_-_71705188_71705219	0.00147757	SOX2.p2	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1	NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1
hg19_v1_chr6_-_42713783_42713810	0.00146179	SOX2.p2	BT007002|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr14_+_67827077_67827084	0.00144036	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr15_+_64388082_64388198	0.00137364	SOX2.p2	NM_001242933|SNX1|6642|sorting nexin 1	NM_003099|SNX1|6642|sorting nexin 1	NM_148955|SNX1|6642|sorting nexin 1	AB209013|SNX1|6642|sorting nexin 1	AK128179|SNX1|6642|sorting nexin 1	AK222561|SNX1|6642|sorting nexin 1	AK291752|SNX1|6642|sorting nexin 1
hg19_v1_chr18_-_24445652_24445781	0.00136871	SOX2.p2	AB128929|AQP4|361|aquaporin 4	BC022286|AQP4|361|aquaporin 4	D63412|AQP4|361|aquaporin 4	AB209156|AQP4|361|aquaporin 4	AK295069|AQP4|361|aquaporin 4	U63622|AQP4|361|aquaporin 4	NM_001650|AQP4|361|aquaporin 4	AK222684|AQP4|361|aquaporin 4	HQ901095|AQP4|361|aquaporin 4
hg19_v1_chr11_+_6947591_6947693	0.00136284	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg19_v1_chr12_-_53045947_53045958	0.0013585	SOX2.p2	BC096294|KRT2|3849|keratin 2	BC099643|KRT2|3849|keratin 2	BC099644|KRT2|3849|keratin 2	M99061|KRT2|3849|keratin 2	NM_000423|KRT2|3849|keratin 2
hg19_v1_chr19_-_58609574_58609587	0.00134679	SOX2.p2	AY279352|ZSCAN18|65982|zinc finger and SCAN domain containing 18	BC022846|ZSCAN18|65982|zinc finger and SCAN domain containing 18	AK225548|ZSCAN18|65982|zinc finger and SCAN domain containing 18
hg19_v1_chr7_+_27779810_27779828	0.0013426	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr19_-_10613266_10613611	0.00133707	SOX2.p2	BC002930|KEAP1|9817|kelch-like ECH-associated protein 1	AF361886|KEAP1|9817|kelch-like ECH-associated protein 1	D50922|KEAP1|9817|kelch-like ECH-associated protein 1	NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1
hg19_v1_chr14_+_67827042_67827058	0.00133556	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr3_+_93781823_93781865	0.00133276	SOX2.p2	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg19_v1_chr1_+_200842082_200842165	0.00132682	SOX2.p2	BC126386|GPR25|2848|G protein-coupled receptor 25	BC126388|GPR25|2848|G protein-coupled receptor 25	AK315339|GPR25|2848|G protein-coupled receptor 25	NM_005298|GPR25|2848|G protein-coupled receptor 25
hg19_v1_chr5_+_65222381_65222437	0.00123486	SOX2.p2	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_001253697|ERBB2IP|55914|erbb2 interacting protein	NM_001253698|ERBB2IP|55914|erbb2 interacting protein	NM_001253699|ERBB2IP|55914|erbb2 interacting protein	NM_001253701|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AF263744|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg19_v1_chr17_+_64831234_64831237	0.00120901	SOX2.p2	AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5
hg19_v1_chr8_+_146277830_146277971	0.00120017	SOX2.p2	BX648996|C8orf33|65265|chromosome 8 open reading frame 33	BC010001|C8orf33|65265|chromosome 8 open reading frame 33	CR457330|C8orf33|65265|chromosome 8 open reading frame 33
hg19_v1_chr15_+_40886442_40886486	0.00119807	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg19_v1_chr22_-_38713384_38713444	0.00119366	SOX2.p2	NM_152221|CSNK1E|1454|casein kinase 1, epsilon
hg19_v1_chr10_+_96443250_96443576	0.00118449	SOX2.p2	NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v1_chr18_-_54305657_54305837	0.00117452	SOX2.p2	AB209263|TXNL1|9352|thioredoxin-like 1	DQ891846|TXNL1|9352|thioredoxin-like 1	DQ895034|TXNL1|9352|thioredoxin-like 1	EU176640|TXNL1|9352|thioredoxin-like 1	AF051896|TXNL1|9352|thioredoxin-like 1	AF052659|TXNL1|9352|thioredoxin-like 1	AK313653|TXNL1|9352|thioredoxin-like 1
hg19_v1_chr7_+_27779743_27779807	0.00113805	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v1_chr12_-_8693391_8693558	0.00113568	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg19_v1_chr15_+_69606741_69606741	0.00111962	SOX2.p2	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V	AY424283|PAQR5|54852|progestin and adipoQ receptor family member V	NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V
hg19_v1_chr6_+_27775898_27775985	0.00111534	SOX2.p2	BC112254|HIST1H2AI|8329|histone cluster 1, H2ai	BC112256|HIST1H2AI|8329|histone cluster 1, H2ai	AK311766|HIST1H2AI|8329|histone cluster 1, H2ai	BC062305|HIST1H3F|8968|histone cluster 1, H3f	NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai	HQ258047|HIST1H2AM|8336|histone cluster 1, H2am
hg19_v1_chr6_-_91006580_91006644	0.00110611	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v1_chr5_+_179159799_179159905	0.00110061	SOX2.p2	D83785|MAML1|9794|mastermind-like 1 (Drosophila)	NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)	AB209135|MAML1|9794|mastermind-like 1 (Drosophila)	BC047937|MAML1|9794|mastermind-like 1 (Drosophila)
hg19_v1_chr18_-_29264394_29264685	0.00110055	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v1_chr16_+_30418576_30418734	0.00106941	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg19_v1_chr6_-_42714547_42714557	0.0010543	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg19_v1_chr12_-_45270632_45270632	0.00102406	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg19_v1_chr12_-_52715140_52715181	0.00102266	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg19_v1_chr5_+_55033844_55033908	0.00101814	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg19_v1_chr6_-_74230155_74230185	0.000998873	SOX2.p2	AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg19_v1_chr6_+_41040891_41040960	0.000963921	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg19_v1_chr13_+_113656027_113656042	0.000956739	SOX2.p2	NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	AK295047|MCF2L|23263|MCF.2 cell line derived transforming sequence-like
hg19_v1_chr1_+_203764750_203764798	0.000955552	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg19_v1_chr12_+_7079943_7080075	0.000923996	SOX2.p2	NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)
hg19_v1_chr11_+_34460421_34460528	0.00092282	SOX2.p2	AK291585|CAT|847|catalase	NM_001752|CAT|847|catalase	BC110398|CAT|847|catalase	AK315350|CAT|847|catalase	X04076|CAT|847|catalase	BC112217|CAT|847|catalase	BC112219|CAT|847|catalase
hg19_v1_chr19_+_2977480_2977652	0.000921011	SOX2.p2	NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)
hg19_v1_chr17_+_75316373_75316408	0.000911068	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg19_v1_chr6_+_42981986_42981992	0.000903173	SOX2.p2	BC041793|KLHDC3|116138|kelch domain containing 3	BC045612|KLHDC3|116138|kelch domain containing 3	BC007296|KLHDC3|116138|kelch domain containing 3	BC009460|KLHDC3|116138|kelch domain containing 3
hg19_v1_chrX_+_47053271_47053296	0.000890471	SOX2.p2	M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1
hg19_v1_chr8_-_30515665_30515808	0.000862775	SOX2.p2	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa
hg19_v1_chr11_-_69634191_69634191	0.000822221	SOX2.p2	NM_005247|FGF3|2248|fibroblast growth factor 3
hg19_v1_chr19_+_18794391_18794458	0.00081666	SOX2.p2	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg19_v1_chr19_+_41770976_41770985	0.000816143	SOX2.p2	AK290729|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v1_chr3_+_39448179_39448241	0.000805056	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA
hg19_v1_chr17_-_7518124_7518489	0.000797678	SOX2.p2	BC067272|FXR2|9513|fragile X mental retardation, autosomal homolog 2	BC020090|FXR2|9513|fragile X mental retardation, autosomal homolog 2	NM_004860|FXR2|9513|fragile X mental retardation, autosomal homolog 2
hg19_v1_chr14_-_76448091_76448091	0.000795847	SOX2.p2	NM_003239|TGFB3|7043|transforming growth factor, beta 3
hg19_v1_chr8_+_23386362_23386378	0.00078383	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr3_+_238274_238289	0.000760418	SOX2.p2	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg19_v1_chr22_+_25595824_25595865	0.000756722	SOX2.p2	NM_004076|CRYBB3|1417|crystallin, beta B3	U71216|CRYBB3|1417|crystallin, beta B3	BC069479|CRYBB3|1417|crystallin, beta B3	BC102021|CRYBB3|1417|crystallin, beta B3	BC102022|CRYBB3|1417|crystallin, beta B3	BC107482|CRYBB3|1417|crystallin, beta B3	CR456427|CRYBB3|1417|crystallin, beta B3
hg19_v1_chr13_-_26795821_26795893	0.000740921	SOX2.p2	AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6	NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6
hg19_v1_chr2_+_207024614_207024703	0.000730901	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg19_v1_chr1_+_47901688_47901688	0.000727819	SOX2.p2	AF042832|FOXD2|2306|forkhead box D2	NM_004474|FOXD2|2306|forkhead box D2
hg19_v1_chr19_+_10362886_10362910	0.000702143	SOX2.p2	BC009858|MRPL4|51073|mitochondrial ribosomal protein L4
hg19_v1_chr15_+_74218962_74219120	0.000689134	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg19_v1_chr6_-_136610932_136610988	0.000682629	SOX2.p2	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1	BC144281|BCLAF1|9774|BCL2-associated transcription factor 1	BC144282|BCLAF1|9774|BCL2-associated transcription factor 1	BC144299|BCLAF1|9774|BCL2-associated transcription factor 1	BC047887|BCLAF1|9774|BCL2-associated transcription factor 1	BC056894|BCLAF1|9774|BCL2-associated transcription factor 1	D79986|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1	NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1	NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1
hg19_v1_chr8_-_18541441_18541624	0.000673386	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg19_v1_chr14_+_67827087_67827147	0.000659693	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v1_chr20_-_45035253_45035346	0.000657777	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg19_v1_chr14_-_50698090_50698111	0.00065574	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg19_v1_chr2_+_190649109_190649291	0.000646414	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg19_v1_chr12_-_72057523_72057673	0.000642417	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg19_v1_chr6_+_88299784_88299891	0.000636656	SOX2.p2	NM_001197259|ORC3|23595|origin recognition complex, subunit 3	NM_012381|ORC3|23595|origin recognition complex, subunit 3	NM_181837|ORC3|23595|origin recognition complex, subunit 3	AF125507|ORC3|23595|origin recognition complex, subunit 3	AK316298|ORC3|23595|origin recognition complex, subunit 3	AL080116|ORC3|23595|origin recognition complex, subunit 3	AK222795|ORC3|23595|origin recognition complex, subunit 3	AK303056|ORC3|23595|origin recognition complex, subunit 3	AF093535|ORC3|23595|origin recognition complex, subunit 3	AK303195|ORC3|23595|origin recognition complex, subunit 3	AK302750|ORC3|23595|origin recognition complex, subunit 3	BC047689|ORC3|23595|origin recognition complex, subunit 3	BC035494|ORC3|23595|origin recognition complex, subunit 3	AK315911|ORC3|23595|origin recognition complex, subunit 3	AK303182|ORC3|23595|origin recognition complex, subunit 3	EU446990|ORC3|23595|origin recognition complex, subunit 3	EU831634|ORC3|23595|origin recognition complex, subunit 3	AF135044|ORC3|23595|origin recognition complex, subunit 3
hg19_v1_chr1_+_43148048_43148073	0.000628501	SOX2.p2	NM_004559|YBX1|4904|Y box binding protein 1
hg19_v1_chr2_+_204192915_204193355	0.000619981	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg19_v1_chr15_-_91565685_91565855	0.00061041	SOX2.p2	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)
hg19_v1_chr16_-_87799495_87799536	0.000598483	SOX2.p2	BC001044|KLHDC4|54758|kelch domain containing 4
hg19_v1_chr6_+_42982002_42982011	0.000590797	SOX2.p2	BC021546|KLHDC3|116138|kelch domain containing 3	BC001789|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr6_-_105627857_105627857	0.000529242	SOX2.p2	AK314101|POPDC3|64208|popeye domain containing 3	NM_022361|POPDC3|64208|popeye domain containing 3
hg19_v1_chr3_-_87325611_87325736	0.000522655	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg19_v1_chr8_+_107460151_107460151	0.000521327	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg19_v1_chr12_+_69080722_69080805	0.000520188	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg19_v1_chr6_+_42981955_42981958	0.000518027	SOX2.p2	BC012987|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr4_+_144435076_144435153	0.000502955	SOX2.p2	
hg19_v1_chr6_+_45296053_45296059	0.00048495	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg19_v1_chrX_+_102192199_102192199	0.000471242	SOX2.p2	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like	BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like	NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like
hg19_v1_chr5_-_172755195_172755329	0.000449592	SOX2.p2	AF031036|STC2|8614|stanniocalcin 2	BT019591|STC2|8614|stanniocalcin 2	CR541825|STC2|8614|stanniocalcin 2	EU832632|STC2|8614|stanniocalcin 2	EU832707|STC2|8614|stanniocalcin 2	BC006352|STC2|8614|stanniocalcin 2	BC013958|STC2|8614|stanniocalcin 2	AF055460|STC2|8614|stanniocalcin 2	AB012664|STC2|8614|stanniocalcin 2	AF098462|STC2|8614|stanniocalcin 2
hg19_v1_chr17_-_42992852_42992919	0.00040695	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_001242376|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg19_v1_chr6_+_42982013_42982022	0.000398929	SOX2.p2	BC000295|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr4_+_2471179_2471182	0.000394063	SOX2.p2	NM_001185009|RNF4|6047|ring finger protein 4	BC031935|RNF4|6047|ring finger protein 4
hg19_v1_chr8_-_144241678_144241701	0.000389818	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg19_v1_chr16_+_24550848_24550939	0.000389627	SOX2.p2	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg19_v1_chr19_-_12992249_12992334	0.000382157	SOX2.p2	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal	AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal	AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal	AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal	AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal	AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal	BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal	AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal	AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal	NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal
hg19_v1_chr8_-_103876390_103876400	0.000379761	SOX2.p2	BC042404|AZIN1|51582|antizyme inhibitor 1	NM_015878|AZIN1|51582|antizyme inhibitor 1	NM_148174|AZIN1|51582|antizyme inhibitor 1
hg19_v1_chr6_+_42981975_42981984	0.000376054	SOX2.p2	AB055925|KLHDC3|116138|kelch domain containing 3	AK290384|KLHDC3|116138|kelch domain containing 3
hg19_v1_chr1_-_205719157_205719227	0.00037172	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v1_chr17_-_40169130_40169182	0.000353762	SOX2.p2	AK298860|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	AK308016|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7	NM_001144766|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7
hg19_v1_chr20_+_1246959_1246998	0.000328272	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg19_v1_chr7_-_94953827_94953883	0.000322509	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg19_v1_chr8_+_23386386_23386443	0.000316027	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg19_v1_chr22_-_31741565_31741686	0.00027656	SOX2.p2	AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg19_v1_chr6_+_27925018_27925018	0.000269096	SOX2.p2	BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6
hg19_v1_chr2_+_70314903_70314932	0.000254474	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg19_v1_chr14_-_104028972_104029150	0.000235808	SOX2.p2	AB020680|BAG5|9529|BCL2-associated athanogene 5	NM_001015048|BAG5|9529|BCL2-associated athanogene 5
hg19_v1_chr2_-_86116016_86116156	0.000231456	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg19_v1_chr2_+_1417232_1417278	0.000217284	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_001206744|TPO|7173|thyroid peroxidase	NM_001206745|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg19_v1_chr1_+_226250433_226250434	0.000215175	SOX2.p2	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	BC081561|H3F3A|3020|H3 histone, family 3A
hg19_v1_chr6_-_27880173_27880173	0.0002043	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg19_v1_chr19_+_57791281_57791431	0.000174945	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg19_v1_chr7_+_73498149_73498162	0.000166153	SOX2.p2	D26309|LIMK1|3984|LIM domain kinase 1
hg19_v1_chr7_+_23530136_23530198	0.000156621	SOX2.p2	BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32
hg19_v1_chr6_-_26199439_26199520	0.000152343	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg19_v1_chr11_-_116658738_116658738	0.000147357	SOX2.p2	BC017349|ZNF259|8882|zinc finger protein 259	NM_003904|ZNF259|8882|zinc finger protein 259
hg19_v1_chr2_+_10091791_10091910	0.00012767	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg19_v1_chr20_-_1472168_1472232	0.000125761	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg19_v1_chr8_+_61429724_61429777	0.000102913	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg19_v1_chr7_+_120965420_120965420	9.33702e-05	SOX2.p2	AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16	NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16
hg19_v1_chr19_-_56988698_56988769	9.29565e-05	SOX2.p2	AK096513|ZNF667|63934|zinc finger protein 667	AK056508|ZNF667|63934|zinc finger protein 667	CR936605|ZNF667|63934|zinc finger protein 667	BX647401|ZNF667|63934|zinc finger protein 667	NM_022103|ZNF667|63934|zinc finger protein 667
hg19_v1_chr9_-_100684770_100684851	8.67813e-05	SOX2.p2	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg19_v1_chr1_+_43148098_43148102	8.3823e-05	SOX2.p2	BC070084|YBX1|4904|Y box binding protein 1
hg19_v1_chr12_+_79258448_79258502	7.94361e-05	SOX2.p2	AK126908|SYT1|6857|synaptotagmin I	NM_005639|SYT1|6857|synaptotagmin I
hg19_v1_chr10_+_12391728_12391827	4.85305e-05	SOX2.p2	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID
hg19_v1_chr3_-_63849456_63849488	4.53435e-05	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg19_v1_chr16_+_31191430_31191457	4.22618e-05	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma
hg19_v1_chr9_-_21228132_21228313	4.04698e-05	SOX2.p2	M71246|IFNA17|3451|interferon, alpha 17	BC096732|IFNA17|3451|interferon, alpha 17	BC098355|IFNA17|3451|interferon, alpha 17	M11026|IFNA17|3451|interferon, alpha 17	NM_021268|IFNA17|3451|interferon, alpha 17	M38289|IFNA17|3451|interferon, alpha 17
hg19_v1_chr13_-_52733669_52733784	2.86365e-05	SOX2.p2	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg19_v1_chr11_-_17498322_17498365	1.866e-05	SOX2.p2	U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8
hg19_v1_chr18_+_48556483_48556586	1.79151e-05	SOX2.p2	NM_005359|SMAD4|4089|SMAD family member 4
hg19_v1_chr8_+_99956630_99956685	6.16601e-06	SOX2.p2	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)	NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)	AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)	AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)	AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)	BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)	AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)
